BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled Sequence Length=494 Score E Sequences producing significant alignments: (Bits) Value Solyc05g005740.3.1 669 0.0 Solyc04g025880.4.1 407 4e-113 Solyc06g050170.4.1 150 7e-36 Solyc08g015680.1.1 84.2 7e-16 Solyc10g047270.2.1 82.4 3e-15 Solyc05g005720.4.1 82.4 3e-15 Solyc01g105150.4.1 78.7 3e-14 Solyc03g097860.1.1 76.8 1e-13 Solyc04g008450.4.1 71.3 6e-12 >Solyc05g005740.3.1 Length=2340 Score = 669 bits (362), Expect = 0.0 Identities = 362/362 (100%), Gaps = 0/362 (0%) Strand=Plus/Minus Query 6 TGGAGCAGGACTAATAATATTATCTTTCTTATAACTTGATAAGTCTTCATCTGCTAACTG 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 399 TGGAGCAGGACTAATAATATTATCTTTCTTATAACTTGATAAGTCTTCATCTGCTAACTG 340 Query 66 ACAACTAGGCAATGAATTAACCTTAGCATGTCTACAAAGTAGTGAATACAAAGCAAAGGT 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 339 ACAACTAGGCAATGAATTAACCTTAGCATGTCTACAAAGTAGTGAATACAAAGCAAAGGT 280 Query 126 TCCACCTTCACCATTGTCATCAGCTTTAAGCACAATGAACACATACTTCAAAAGAGGAAC 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 279 TCCACCTTCACCATTGTCATCAGCTTTAAGCACAATGAACACATACTTCAAAAGAGGAAC 220 Query 186 TAAAGTCAATGTCCAAAACACAAATGATAAAACCCCATAAATTTCTTCATTACTCTCTGA 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 219 TAAAGTCAATGTCCAAAACACAAATGATAAAACCCCATAAATTTCTTCATTACTCTCTGA 160 Query 246 GTGTGTAATGTCTTCAGCAAAAGTACTCTTATACACATACAAAGGTGATGTACTCAAATC 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 GTGTGTAATGTCTTCAGCAAAAGTACTCTTATACACATACAAAGGTGATGTACTCAAATC 100 Query 306 CCCATAAACAACTCCTAAACTCTGATAAGCCAATGTCAAGATTGTCTTCCATGATTCTTT 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 99 CCCATAAACAACTCCTAAACTCTGATAAGCCAATGTCAAGATTGTCTTCCATGATTCTTT 40 Query 366 CT 367 || Sbjct 39 CT 38 >Solyc04g025880.4.1 Length=2328 Score = 407 bits (220), Expect = 4e-113 Identities = 317/365 (87%), Gaps = 2/365 (1%) Strand=Plus/Minus Query 10 GCAGGACTAATAATATTATCTTTCTTATAACTTGATAAGTCTTCATCTGCTAACTGACAA 69 |||||| || |||||| || ||||||||| ||||||| | |||||||||||||| || Sbjct 395 GCAGGAATATTAATATCATTCTTCTTATAAGTTGATAATTTCTCATCTGCTAACTGGGAA 336 Query 70 CTAGGCAATGAATTAACCTTAGCATGTCTACA-AAGTAGTGAATACAAAGCAAAGGTTCC 128 |||||||||||||||| |||||||||||||| ||| |||||||| | |||||| ||||| Sbjct 335 TTAGGCAATGAATTAACTTTAGCATGTCTACATAAG-AGTGAATAAAGAGCAAATGTTCC 277 Query 129 ACCTTCACCATTGTCATCAGCTTTAAGCACAATGAACACATACTTCAAAAGAGGAACTAA 188 ||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| || Sbjct 276 TCCTTCACCATTATCATCAGCTTTAAGCACAATGAAGACATATTTCAACAGAGGAATCAA 217 Query 189 AGTCAATGTCCAAAACACAAATGATAAAACCCCATAAATTTCTTCATTACTCTCTGAGTG 248 ||||||||||||||| | |||||||||||||||||||| |||||| || ||||||| || Sbjct 216 AGTCAATGTCCAAAAGATAAATGATAAAACCCCATAAACTTCTTCGTTTGTCTCTGAATG 157 Query 249 TGTAATGTCTTCAGCAAAAGTACTCTTATACACATACAAAGGTGATGTACTCAAATCCCC 308 | ||||||| |||||||||||||| |||| ||||| | ||||||||||||||||| || Sbjct 156 TTTAATGTCCTCAGCAAAAGTACTTGTATATACATAGAGTGGTGATGTACTCAAATCACC 97 Query 309 ATAAACAACTCCTAAACTCTGATAAGCCAATGTCAAGATTGTCTTCCATGATTCTTTCTG 368 |||||||||||||||||| ||||||||||||||||| | |||| |||| |||||||||| Sbjct 96 ATAAACAACTCCTAAACTTTGATAAGCCAATGTCAACACTGTCCTCCAAGATTCTTTCTT 37 Query 369 CAAAC 373 |||| Sbjct 36 TAAAC 32 >Solyc06g050170.4.1 Length=2955 Score = 150 bits (81), Expect = 7e-36 Identities = 198/256 (77%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 83 TAACCTTAGCATGTCTACAAAGTAGTGAATACAAAGCAAAGGTTCCACCTTCACCATTGT 142 |||| || ||||| || || | || ||||| | ||||| || |||||||| ||||||| Sbjct 319 TAACTTTGGCATGCCTGCATATTAAGGAATAGAGCGCAAAAGTACCACCTTCTCCATTGT 260 Query 143 CATCAGCTTTAAGCACAATGAACACATACTTCAAAAGAGGAACTAAAGTCAATGTCCAAA 202 |||||||| |||||| || || ||||| || || |||||||||| || || ||||||| Sbjct 259 CATCAGCTCGAAGCACGATAAAGACATATTTGAATAGAGGAACTAGTGTTAAAGTCCAAA 200 Query 203 ACACAAATGATAAAACCCCATAAATTTCTTCATTACTCTCTGAGTG-TGTAATGTCTTCA 261 | || || || | ||| ||| |||| ||||||||| | || || || || ||||||||| Sbjct 199 AAACGAAAGAGAGAACGCCAAAAATCTCTTCATTAGTTTCAGAATGATG-AATGTCTTCT 141 Query 262 GCAAAAGTACTCTTATACACATACAAAGGTGATGTACTCAAATCCCCATAAACAACTCCT 321 ||||| || ||||| || ||||| | ||| || |||| | ||| ||||| || || || Sbjct 140 GCAAATGTGCTCTTGTAGACATAGAGAGGGGAAATACTGAGATCACCATACACTACCCCA 81 Query 322 AAACTCTGATAAGCCA 337 | |||||||||||||| Sbjct 80 AGACTCTGATAAGCCA 65 >Solyc08g015680.1.1 Length=2427 Score = 84.2 bits (45), Expect = 7e-16 Identities = 183/251 (73%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 91 GCATGTCTACAAAGTAGTGAATACAAAGCAAAGGTTCCACCTTCACCATTGTCATCAGCT 150 ||||||||||| ||||| || || | |||||| || |||||||||||||| |||||||| Sbjct 404 GCATGTCTACAGAGTAGAGAGTAAAGAGCAAAAGTACCACCTTCACCATTATCATCAGCA 345 Query 151 TTAAGCACAATGAACACATACTTCAAAAGAGGAACTAA-AGTCAATGTCCAAAACACAAA 209 | || ||||| | ||||| || | | ||||| ||| ||| | |||||| || | || Sbjct 344 CTCAGTACAATAAGTACATATTTTATCAAAGGAA-TAAGAGTTATTGTCCAGAAAATCAA 286 Query 210 TGATAAAACCCCATAAATTTCTTCATTACTCTC-TGAGTGTGTAATGTCTTCAGCAAAAG 268 ||| || | ||| | ||| ||| | ||| | | || || || || |||| Sbjct 285 TGAAAATGCACCAAATATTGTTTCTGGAGTCTGATAATCCTGCAACTTCCCCA-CAAATA 227 Query 269 TACTCTTATACACATACAAAGGTGATGTACTCAAATCCCCATAAACAACTCCTAAACTCT 328 |||||||||| ||||| | ||||| || |||||||| ||||| || || || | ||||| Sbjct 226 TACTCTTATAGACATAAAGTGGTGAAGTGCTCAAATCTCCATACACCACCCCAAGACTCT 167 Query 329 GATAAGCCAAT 339 | || |||||| Sbjct 166 GGTATGCCAAT 156 >Solyc10g047270.2.1 Length=2556 Score = 82.4 bits (44), Expect = 3e-15 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 81 ATTAACCTTAGCATGTCTACAAAGTAGTGAATACAAAGCAAAGGTTCCACCTTCACCATT 140 ||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||||| Sbjct 561 ATTAACCTTAGCATGCCTACAAAGCAGTGAGTACAAAGCAAAAGTACCACCTTCACCATC 502 Query 141 GTCAT 145 |||| Sbjct 501 ATCAT 497 >Solyc05g005720.4.1 Length=2400 Score = 82.4 bits (44), Expect = 3e-15 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 108 TGAATACAAAGCAAAGGTTCCACCTTCACCATTGTCATCAGCTTTAAGCACAATGAACAC 167 ||||||||| ||||| ||||| |||||||||||||| | || |||||||| || ||||| Sbjct 534 TGAATACAACGCAAATGTTCCTCCTTCACCATTGTCGTTGGCCTTAAGCACGATAAACAC 475 Query 168 ATACTTCAAAAGAGGAA 184 |||||||| ||||||| Sbjct 474 ATACTTCATTAGAGGAA 458 >Solyc01g105150.4.1 Length=2586 Score = 78.7 bits (42), Expect = 3e-14 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 81 ATTAACCTTAGCATGTCTACAAAGTAGTGAATACAAAGCAAAGGTTCCACCTTCACC 137 ||||||||| |||||||||||||| | ||| |||||||||||||| ||||||||||| Sbjct 558 ATTAACCTTTGCATGTCTACAAAGCAATGAGTACAAAGCAAAGGTACCACCTTCACC 502 >Solyc03g097860.1.1 Length=2349 Score = 76.8 bits (41), Expect = 1e-13 Identities = 96/122 (79%), Gaps = 5/122 (4%) Strand=Plus/Minus Query 97 CTACAAAGTAGTGAATACAAAGCAAAGGTTCCACCTTCACCATTGTCATCAGCTTT-AAG 155 ||||||||||| |||||||||||||| || |||||||| || || |||||||| || ||| Sbjct 305 CTACAAAGTAGGGAATACAAAGCAAATGTACCACCTTCTCCGTTATCATCAGCCTTGAAG 246 Query 156 CACAATGAACACATACTTCAA-AAGAGGAACTAAAGTCAATGTCCAAAACACAAATGATA 214 || || || |||| ||||| ||| |||| | || || |||||||| || || || | Sbjct 245 -ACTATAAAGGCATATTTCAACAAG-GGAATGATGGTTAAAGTCCAAAAAACGAAGGA-A 189 Query 215 AA 216 || Sbjct 188 AA 187 >Solyc04g008450.4.1 Length=2142 Score = 71.3 bits (38), Expect = 6e-12 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 96 TCTACAAAGTAGTGAATACAAAGCAAAGGTTCCACCTTCACCATTGTCATCAGCTT 151 ||||||||||| |||||| | ||||||||||||||||||||| | |||||||||| Sbjct 369 TCTACAAAGTAATGAATAAAGAGCAAAGGTTCCACCTTCACCCTGATCATCAGCTT 314 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16062628350 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5