BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: N.benthamiana Genome v1.0.1 predicted cDNA 57,140 sequences; 82,582,885 total letters Query= Untitled_sequence Length=1287 Score E Sequences producing significant alignments: (Bits) Value Niben101Scf00592g15016.1sp|Q6P7W0|SENP6_MOUSE *-*- Sentrin-specif... 1485 0.0 Niben101Scf07027g05004.1ref|XP_007037886.1| *-*- Cysteine protein... 795 0.0 Niben101Scf08250g02010.1sp|P59110|SENP1_MOUSE *-*- Sentrin-specif... 243 7e-63 >Niben101Scf00592g15016.1 sp|Q6P7W0|SENP6_MOUSE *-*- Sentrin-specific protease 6 IPR003653 (Peptidase C48, SUMO/Sentrin/Ubl1) GO:0006508 (proteolysis), GO:0008234 (cysteine-type peptidase activity) Length=1940 Score = 1485 bits (804), Expect = 0.0 Identities = 804/804 (100%), Gaps = 0/804 (0%) Strand=Plus/Plus Query 1 ATGTCGAAGCGCAAGCGTGTAGGGACGCCAAAGGGCATTAACAGCTCCCTTCTTAACCCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108 ATGTCGAAGCGCAAGCGTGTAGGGACGCCAAAGGGCATTAACAGCTCCCTTCTTAACCCT 167 Query 61 TCAGATAATCTAAAAGGTATCCATGTACCTGAAGAAACAAGTAGCTTCAATCAGAATGGC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 168 TCAGATAATCTAAAAGGTATCCATGTACCTGAAGAAACAAGTAGCTTCAATCAGAATGGC 227 Query 121 TCATTGCGTAAAAATGTCTCTCGACAGCAAAGATCAAAGGGGGGAGGACAAACTTCTGAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 228 TCATTGCGTAAAAATGTCTCTCGACAGCAAAGATCAAAGGGGGGAGGACAAACTTCTGAA 287 Query 181 TCTTCTGCCCCTGAAATTGTGAATCATCAGCAAGCCAATATACATACTCCTGCAGATCAA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 TCTTCTGCCCCTGAAATTGTGAATCATCAGCAAGCCAATATACATACTCCTGCAGATCAA 347 Query 241 AACATTAAAGGCATCCATGTACCTGAAGAAACAAACAACTTCAATCAATACTGCTCATTG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 348 AACATTAAAGGCATCCATGTACCTGAAGAAACAAACAACTTCAATCAATACTGCTCATTG 407 Query 301 CATAAGAATGTCCCTCGACGGCAAAGATCAAAGGGGGGAGTACAAACTTCTGCAACTGAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 408 CATAAGAATGTCCCTCGACGGCAAAGATCAAAGGGGGGAGTACAAACTTCTGCAACTGAT 467 Query 361 GAGGAAAGGATTAATACGGAAATCCCAAGTACGTCACAGATTAGACCACGATCACGTGCA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 468 GAGGAAAGGATTAATACGGAAATCCCAAGTACGTCACAGATTAGACCACGATCACGTGCA 527 Query 421 CTTAGACGAAAAAGTAAGGTGACAGCTGATACAAGTCATTCTGAAGTTATCCCGGAGCAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 528 CTTAGACGAAAAAGTAAGGTGACAGCTGATACAAGTCATTCTGAAGTTATCCCGGAGCAA 587 Query 481 GCTTCTTGTTGTTCGCAGTTTAAAGCACGAGCACATTCACGAAAAAGAGGGAAAAGTAAG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 588 GCTTCTTGTTGTTCGCAGTTTAAAGCACGAGCACATTCACGAAAAAGAGGGAAAAGTAAG 647 Query 541 ATAACAGCCGATACAAGGGATTCTGAAGTTATCCCAAAGCATACTTCTTGTTTTCATGGT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 648 ATAACAGCCGATACAAGGGATTCTGAAGTTATCCCAAAGCATACTTCTTGTTTTCATGGT 707 Query 601 CAATCAAGGAGGAACAACAGTCAAAAGGGGTTAGGCTCATGGAAGTTTGAGCGATACTTA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 708 CAATCAAGGAGGAACAACAGTCAAAAGGGGTTAGGCTCATGGAAGTTTGAGCGATACTTA 767 Query 661 GAGAGCATATGGAAATGGCATCCAGAAGATAGGAAGAACTCATTTACATACCTTGACAGC 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 768 GAGAGCATATGGAAATGGCATCCAGAAGATAGGAAGAACTCATTTACATACCTTGACAGC 827 Query 721 TTGTGGTTCTCCTTGTACTCAGAACGTTCTCACAAAGCTAAGGTGTTGAATTGGATTACA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 828 TTGTGGTTCTCCTTGTACTCAGAACGTTCTCACAAAGCTAAGGTGTTGAATTGGATTACA 887 Query 781 AAAAAGAACATATTCTCGAAAAAG 804 |||||||||||||||||||||||| Sbjct 888 AAAAAGAACATATTCTCGAAAAAG 911 Score = 730 bits (395), Expect = 0.0 Identities = 395/395 (100%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 831 GGGTCACTGGAGTCTCCTGATCTTTTGTCACCTTGATGAAAGTTTACAATCTAAAGCAAG 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 911 GGGTCACTGGAGTCTCCTGATCTTTTGTCACCTTGATGAAAGTTTACAATCTAAAGCAAG 970 Query 891 AAGTCCTTGCATGTTGTTGCTTGATTCTTTGCAGATGGCAAATCCTGAGAGACTTGAACC 950 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 971 AAGTCCTTGCATGTTGTTGCTTGATTCTTTGCAGATGGCAAATCCTGAGAGACTTGAACC 1030 Query 951 TGGGATCAGAAAATTTGTTATAGACATATTCAAAGCAGAGCACAGGCCAGAAATCAAGGA 1010 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1031 TGGGATCAGAAAATTTGTTATAGACATATTCAAAGCAGAGCACAGGCCAGAAATCAAGGA 1090 Query 1011 CCAGATCAGGAAAATCCCTCTAATGATTCCAAAGGTTCCGCAGCAGAGAAATGATGAAGA 1070 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1091 CCAGATCAGGAAAATCCCTCTAATGATTCCAAAGGTTCCGCAGCAGAGAAATGATGAAGA 1150 Query 1071 CTGTGGCAATTTTGTTTTGTACTACATAAACCTCTTCTTAGAGAGTGCTCCAGAAAATTT 1130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1151 CTGTGGCAATTTTGTTTTGTACTACATAAACCTCTTCTTAGAGAGTGCTCCAGAAAATTT 1210 Query 1131 TAGCATTTCAAAGGGTTATCCTTACTTTATGACAGAAGACTGGTTTACTCTTGAACGATT 1190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1211 TAGCATTTCAAAGGGTTATCCTTACTTTATGACAGAAGACTGGTTTACTCTTGAACGATT 1270 Query 1191 GGAACGCTTTTGCCAACAACTGCAATCTACCATTG 1225 ||||||||||||||||||||||||||||||||||| Sbjct 1271 GGAACGCTTTTGCCAACAACTGCAATCTACCATTG 1305 Score = 124 bits (67), Expect = 3e-27 Identities = 93/106 (88%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 247 AAAGGCATCCATGTACCTGAAGAAACAAACAACTTCAATCAATACTGCTCATTGCATAAG 306 ||||| |||||||||||||||||||||| | ||||||||| | ||||||||| ||| Sbjct 180 AAAGGTATCCATGTACCTGAAGAAACAAGTAGCTTCAATCAGAATGGCTCATTGCGTAAA 239 Query 307 AATGTCCCTCGACGGCAAAGATCAAAGGGGGGAGTACAAACTTCTG 352 |||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct 240 AATGTCTCTCGACAGCAAAGATCAAAGGGGGGAGGACAAACTTCTG 285 Score = 124 bits (67), Expect = 3e-27 Identities = 93/106 (88%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 73 AAAGGTATCCATGTACCTGAAGAAACAAGTAGCTTCAATCAGAATGGCTCATTGCGTAAA 132 ||||| |||||||||||||||||||||| | ||||||||| | ||||||||| ||| Sbjct 354 AAAGGCATCCATGTACCTGAAGAAACAAACAACTTCAATCAATACTGCTCATTGCATAAG 413 Query 133 AATGTCTCTCGACAGCAAAGATCAAAGGGGGGAGGACAAACTTCTG 178 |||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct 414 AATGTCCCTCGACGGCAAAGATCAAAGGGGGGAGTACAAACTTCTG 459 >Niben101Scf07027g05004.1 ref|XP_007037886.1| *-*- Cysteine proteinases superfamily protein, putative isoform 5 [Theobroma cacao] gb|EOY22387.1| Cysteine proteinases superfamily protein, putative isoform 5 [Theobroma cacao] Length=1955 Score = 795 bits (430), Expect = 0.0 Identities = 466/484 (96%), Gaps = 0/484 (0%) Strand=Plus/Plus Query 347 CTTCTGCAACTGATGAGGAAAGGATTAATACGGAAATCCCAAGTACGTCACAGATTAGAC 406 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 287 CTTCAGCAACTGATGAGGAAAGGATTAATACGGAACTCCCAAGTACGTCACAGATCAGAC 346 Query 407 CACGATCACGTGCACTTAGACGAAAAAGTAAGGTGACAGCTGATACAAGTCATTCTGAAG 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347 CACGATCACGTGCACTTAGACGAAAAAGTAAGGTGACAGCTGATACAAGTCATTCTGAAG 406 Query 467 TTATCCCGGAGCAAGCTTCTTGTTGTTCGCAGTTTAAAGCACGAGCACATTCACGAAAAA 526 ||||||| |||||| ||||||||||||||||||||||| |||| |||| ||| | ||||| Sbjct 407 TTATCCCAGAGCAACCTTCTTGTTGTTCGCAGTTTAAACCACGTGCACCTTCGCAAAAAA 466 Query 527 GAGGGAAAAGTAAGATAACAGCCGATACAAGGGATTCTGAAGTTATCCCAAAGCATACTT 586 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 467 GACAGAAAAGTAAGATAACAGCTGATACAAGGGATTCTGAAGTTATCCCAAAGCATACTG 526 Query 587 CTTGTTTTCATGGTCAATCAAGGAGGAACAACAGTCAAAAGGGGTTAGGCTCATGGAAGT 646 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 CTCGTTTTCATGGTCAATCAAGGAGGAACAACAGTCAAAAGGGGTTAGGCTCATGGAAGT 586 Query 647 TTGAGCGATACTTAGAGAGCATATGGAAATGGCATCCAGAAGATAGGAAGAACTCATTTA 706 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 587 TTGAGCGGTACTTGGAGAGCATATGGAAATGGCATCCAGAAGATAGGAAGAACTCATTTA 646 Query 707 CATACCTTGACAGCTTGTGGTTCTCCTTGTACTCAGAACGTTCTCACAAAGCTAAGGTGT 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 647 CATACCTTGACAGCTTGTGGTTCTCCTTGTACTCAGAACGTTCTCACAAAGCTAAGGTGT 706 Query 767 TGAATTGGATTACAAAAAAGAACATATTCTCGAAAAAGTATATTTTTGTTCCCATTGTTA 826 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 707 TGAATTGGATTACAAAAAAGAACATATTCTCAAAAAAGTATATTTTTGTTCCCATTGTTA 766 Query 827 TGTG 830 |||| Sbjct 767 TGTG 770 Score = 387 bits (209), Expect = 3e-106 Identities = 233/245 (95%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 1043 AGGTTCCGCAGCAGAGAAATGATGAAGACTGTGGCAATTTTGTTTTGTACTACATAAACC 1102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1043 AGGTTCCGCAGCAGAGAAATGATGAAGACTGTGGCAATTTTGTTTTGTACTACATAAACC 1102 Query 1103 TCTTCTTAGAGAGTGCTCCAGAAAATTTTAGCATTTCAAAGGGTTATCCTTACTTTATGA 1162 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 1103 TCTTCTTAGAGAGTGCTCCAGAAAATTTTAGCATTTCAAATGGTTACCCTTACTTTATGA 1162 Query 1163 CAGAAGACTGGTTTACTCTTGAACGATTGGAACGCTTTTGCCAACAACTGCAATCTACCA 1222 ||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| | Sbjct 1163 CAGAAGACTGGTTTACTCTTGAACGGTTGGAATGCTTTTGCCAAGAACTGCAATCTACTA 1222 Query 1223 TTGTGAGTACTTCTGATTCTGATGAATTCCTCCGAGACGACGGGGATGTAGTGTGTCTAG 1282 || ||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||| Sbjct 1223 TTACGAGTACTTCTGATTCTGATGAATGCCTCCTAGATGACGGAGATGTAGTGTGTCTAG 1282 Query 1283 ATTAG 1287 ||||| Sbjct 1283 ATTAG 1287 Score = 145 bits (78), Expect = 2e-33 Identities = 82/84 (98%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 963 ATTTGTTATAGACATATTCAAAGCAGAGCACAGGCCAGAAATCAAGGACCAGATCAGGAA 1022 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 892 ATTTGTTATAGACATATTCAAAGCAGAGCACAGGCCAGAAACCAAGGACCAGATCAGGAA 951 Query 1023 AATCCCTCTAATGATTCCAAAGGT 1046 |||||||||| ||||||||||||| Sbjct 952 AATCCCTCTATTGATTCCAAAGGT 975 Score = 86.1 bits (46), Expect = 1e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 1 ATGTCGAAGCGCAAGCGTGTAGGGACGCCAAAGGGCATTAACAGCTCCCTTCTTAACCCT 60 |||||||||||||||||| ||||||| ||||| ||| ||||||| |||||||||||||| Sbjct 229 ATGTCGAAGCGCAAGCGTCGAGGGACGGCAAAGAGCACTAACAGCACCCTTCTTAACCCT 288 Query 61 TCAG 64 |||| Sbjct 289 TCAG 292 Score = 73.1 bits (39), Expect = 1e-11 Identities = 39/39 (100%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 924 GATGGCAAATCCTGAGAGACTTGAACCTGGGATCAGAAA 962 ||||||||||||||||||||||||||||||||||||||| Sbjct 770 GATGGCAAATCCTGAGAGACTTGAACCTGGGATCAGAAA 808 >Niben101Scf08250g02010.1 sp|P59110|SENP1_MOUSE *-*- Sentrin-specific protease 1 IPR003653 (Peptidase C48, SUMO/Sentrin/Ubl1) GO:0006508 (proteolysis), GO:0008234 (cysteine-type peptidase activity) Length=2098 Score = 243 bits (131), Expect = 7e-63 Identities = 422/564 (75%), Gaps = 14/564 (2%) Strand=Plus/Plus Query 646 TTTGAGCGATACTTAGAGAGCATATGGAAATGGCA-T-CCAGAAGATAGGAAGAACTCAT 703 ||||| | ||| | |||| |||||||| || | | ||||| |||| ||| | |||| Sbjct 268 TTTGACTGCTACCTGGAGAACATATGGA--GGGAACTCCCAGAGGATAAGAAAAGTTCAT 325 Query 704 TTACATACCTTGACAGCTTGTGGTTCTCCTTGTACTCAGAACGTTCT-CACAAAGCTAAG 762 || |||||||||| | ||||||| | || ||| || | | || |||| |||||| Sbjct 326 TTGCATACCTTGAGTCCATGTGGTTTTATTTATACACA-ACCAAACTATACAAGGCTAAG 384 Query 763 GTGTTGAATTGGATTA-CAAAAAAGAACATATTCTCGAAAAAGTATATTTTTGTTCCCAT 821 ||||||| ||||||| || |||||||||||||||| ||| ||||||||||||| Sbjct 385 GTGTTGAGGTGGATTAAGGGGCTAG-ACATATTCTCGAAAAAATATGTTTTTGTTCCCAT 443 Query 822 TGTTATGTGGGGTCACTGGAGTCTCCTGATCTTTTGTCACCTTGATGAAAGTTTACAATC 881 ||| | |||| ||| ||| |||| |||||||||| | || | | ||||||| | || Sbjct 444 CGTTCTCTGGGATCATTGGTGTCTTTTGATCTTTTGCAATCTCGGCGGAAGTTTAGAGTC 503 Query 882 TAAAGCAAGAAGTCCTTGCATGTTGTTGCTTGATTCTTTGCAGATGGCAA-ATCCT-GAG 939 || | | || ||| || ||||||||||| ||||| |||| |||||| | ||| | Sbjct 504 GGAATCCAAAACTCCCTGTATGTTGTTGCTGGATTCACTGCATATGGCAGGACCCTCGCC 563 Query 940 AGACTTGAACCTGGGATCAGAAAATTTGTTATAGACATATTCAAAGCAGAGCACAGGCCA 999 | | |||||||| ||| |||||||||||| | ||| | || ||| || | |||||| Sbjct 564 ATA--TGAACCTGAGATAAGAAAATTTGTTTTGGACGTTTTAAAAAATGAAGAGAGGCCA 621 Query 1000 GAAATCAAGGACCAGATCAGGAAAATCCCTCTAATGATTCCAAAGGTTCCGCAGCAGAGA 1059 || | | || | | ||| | ||||||| || ||||||| ||||| |||||||||| | Sbjct 622 GAGAGCCAGCAGCTGATTAAGAAAATCAAGTTATTGATTCCTAAGGTGCCGCAGCAGACA 681 Query 1060 AATGATGAAGACTGTGGCAATTTTGTTTTGTACTACATAAACCTCTTCTTAGAGAGTGCT 1119 |||| | ||||| || || |||| |||||||||||| | ||| ||| ||||||| ||| Sbjct 682 AATGGTACGGACTGCGGTAAATTTGCTTTGTACTACATTAGCCTTTTCCTAGAGAGCGCT 741 Query 1120 CCAGAAAATTTTAGCATTTCAAAGGGTTATCCTTACTTTATGACAGA-AGACTGGTTTAC 1178 || ||||| ||||||||||| | || || ||||||||||||| ||| |||||||||||| Sbjct 742 CCGGAAAACTTTAGCATTTCTGAAGGCTACCCTTACTTTATGA-AGAGAGACTGGTTTAC 800 Query 1179 TCTTGAACGATTGGAACGCTTTTG 1202 || ||| | || ||| ||||||| Sbjct 801 TCCTGACCAGTTAGAAAGCTTTTG 824 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 102263625945 Database: N.benthamiana Genome v1.0.1 predicted cDNA Posted date: Mar 21, 2024 4:04 PM Number of letters in database: 82,582,885 Number of sequences in database: 57,140 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5