BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= Untitled_sequence Length=633 Score E Sequences producing significant alignments: (Bits) Value Solyc10g078850.1Germin-like protein 5 (AHRD V1 ***- A8QK91_VITVI)... 1170 0.0 Solyc10g078840.1Germin-like protein 3 (AHRD V1 ***- Q6JVN1_VITVI)... 771 0.0 Solyc01g102900.2Germin-like protein 4 (AHRD V1 ***- A8QK90_VITVI)... 84.2 1e-15 >Solyc10g078850.1 Germin-like protein 5 (AHRD V1 ***- A8QK91_VITVI); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold Length=633 Score = 1170 bits (633), Expect = 0.0 Identities = 633/633 (100%), Gaps = 0/633 (0%) Strand=Plus/Plus Query 1 ATGGCTAAGCACTTTCTCCTGCTGAATCTGATAGCACTAAGTTTCTGCTGTGCTGTGTTA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTAAGCACTTTCTCCTGCTGAATCTGATAGCACTAAGTTTCTGCTGTGCTGTGTTA 60 Query 61 GCTTTTGAGTCAAGTCCAATGCAAGATTTCTGTGTGGCCGATCTTGCTAGCACAGCTTGC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCTTTTGAGTCAAGTCCAATGCAAGATTTCTGTGTGGCCGATCTTGCTAGCACAGCTTGC 120 Query 121 AAAGATCCCAAGTCTGTTATCTCAGAGGATTTTTTCTTCGGTGGCCTACATTTGGCTGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAAGATCCCAAGTCTGTTATCTCAGAGGATTTTTTCTTCGGTGGCCTACATTTGGCTGGA 180 Query 181 AACACATCAAACACTTTTGGCTCCAAGGTAACTCGTGTTAACGCGACTAAAATACCAGGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AACACATCAAACACTTTTGGCTCCAAGGTAACTCGTGTTAACGCGACTAAAATACCAGGA 240 Query 241 CTGAACACTCTAGGTATCTCACTGGCACGCGTAGACTATGCACCATGGGGAGTTAATCCG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGAACACTCTAGGTATCTCACTGGCACGCGTAGACTATGCACCATGGGGAGTTAATCCG 300 Query 301 CCTCACACTCACCCAAGAGCTACTGAAATATTCACAGTCCTTGCCGGTTCTCTTCAAGTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CCTCACACTCACCCAAGAGCTACTGAAATATTCACAGTCCTTGCCGGTTCTCTTCAAGTT 360 Query 361 GGTTTCGTATCTTCAAATCCTGAAAATCGCCATATTACTAAGGTCCTTAAAAAAGGCGAT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GGTTTCGTATCTTCAAATCCTGAAAATCGCCATATTACTAAGGTCCTTAAAAAAGGCGAT 420 Query 421 GTGTTTGTTTTTCCAATTGGACTTGTTCACTACCAACGCAATGTGGGATATGGAAATGCT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTGTTTGTTTTTCCAATTGGACTTGTTCACTACCAACGCAATGTGGGATATGGAAATGCT 480 Query 481 GTTGCTGTTGCTGCTTTGAGTAGTCAGAATCCTGGTGTTATAAGCATTGCTAATGTAGTT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GTTGCTGTTGCTGCTTTGAGTAGTCAGAATCCTGGTGTTATAAGCATTGCTAATGTAGTT 540 Query 541 TTCGAATCAGAACCAGCCATAGCAACAGATATTCTTGCCAAGGCTTTTCAAGTTGATGAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTCGAATCAGAACCAGCCATAGCAACAGATATTCTTGCCAAGGCTTTTCAAGTTGATGAA 600 Query 601 ACTGTGGTTGCTCAGATACAATCAAAGTTCTAA 633 ||||||||||||||||||||||||||||||||| Sbjct 601 ACTGTGGTTGCTCAGATACAATCAAAGTTCTAA 633 >Solyc10g078840.1 Germin-like protein 3 (AHRD V1 ***- Q6JVN1_VITVI); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold Length=654 Score = 771 bits (417), Expect = 0.0 Identities = 574/647 (89%), Gaps = 21/647 (3%) Strand=Plus/Plus Query 1 ATGGCTAAGCACTTTCTCCTGCTGAATCTGATAGC---ACTAAGTTTCTGCTGTGCTGTG 57 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct 1 ATGGCTAAGCACTTTCTCCTGCTGAATCTAATAGCAGTACTAAGTTTCTGCTGTGTTGTG 60 Query 58 TTAGCTTTTGAGTCAAGTCCAATGCAAGATTTCTGTGTGGCCGATC-T--T------GCT 108 |||||||||||| |||||||| ||||||||||||||||||| |||| | | ||| Sbjct 61 TTAGCTTTTGAGCCAAGTCCATTGCAAGATTTCTGTGTGGCTGATCCTGCTGGCACAGCT 120 Query 109 -A---GCA---C--AGCTTGCAAAGATCCCAAGTCTGTTATCTCAGAGGATTTTTTCTTC 159 | | | | |||||||||||||||||| |||||| |||| || ||||||||| Sbjct 121 AAGGTGAATGGCTTAGCTTGCAAAGATCCCAAATCTGTTGGAGCAGATGACTTTTTCTTC 180 Query 160 GGTGGCCTACATTTGGCTGGAAACACATCAAACACTTTTGGCTCCAAGGTAACTCGTGTT 219 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || Sbjct 181 AGTGGCCTACATTTGGCTGGAAACACATCAAACACTTTTGGCTCTAAGGTCACTCCTGCC 240 Query 220 AACGCGACTAAAATACCAGGACTGAACACTCTAGGTATCTCACTGGCACGCGTAGACTAT 279 || | || |||| |||||| |||||||||||||||| |||||||| ||||| |||||| Sbjct 241 AATGTAGCTCAAATTCCAGGATTGAACACTCTAGGTATATCACTGGCTCGCGTTGACTAT 300 Query 280 GCACCATGGGGAGTTAATCCGCCTCACACTCACCCAAGAGCTACTGAAATATTCACAGTC 339 |||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| Sbjct 301 GCACCATGGGGAATTAATCCTCCTCACACTCACCCAAGAGCTACTGAGATACTCACAGTC 360 Query 340 CTTGCCGGTTCTCTTCAAGTTGGTTTCGTATCTTCAAATCCTGAAAATCGCCATATTACT 399 |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 361 CTTGAAGGTTCTCTTCAAGTTGGTTTCGTAACTTCAAATCCTGAAAATCGCCATATTACT 420 Query 400 AAGGTCCTTAAAAAAGGCGATGTGTTTGTTTTTCCAATTGGACTTGTTCACTACCAACGC 459 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 421 AAGGTCCTTAAAAAAGGCGATGTGTTTGTTTTTCCAGTTGGACTTGTTCACTACCAACGC 480 Query 460 AATGTGGGATATGGAAATGCTGTTGCTGTTGCTGCTTTGAGTAGTCAGAATCCTGGTGTT 519 || |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 481 AACGTGGGAAATGGAAATGCTGTTGCTATTGCTGCTTTGAGCAGTCAGAATCCTGGTGTT 540 Query 520 ATAAGCATTGCTAATGTAGTTTTCGAATCAGAACCAGCCATAGCAACAGATATTCTTGCC 579 ||||||||||| |||| | |||| | ||| |||||||| ||||||||||||||||||||| Sbjct 541 ATAAGCATTGCCAATGCAATTTTTGGATCGGAACCAGCTATAGCAACAGATATTCTTGCC 600 Query 580 AAGGCTTTTCAAGTTGATGAAACTGTGGTTGCTCAGATACAATCAAA 626 ||||||||||||||||||| ||||| | |||||||||||||||||| Sbjct 601 AAGGCTTTTCAAGTTGATGCCACTGTTGCTGCTCAGATACAATCAAA 647 >Solyc01g102900.2 Germin-like protein 4 (AHRD V1 ***- A8QK90_VITVI); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold Length=1020 Score = 84.2 bits (45), Expect = 1e-15 Identities = 140/186 (75%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 415 GGCGATGTGTTTGTTTTTCCAATTGGACTTGTTCACTACCAACGCAATGTGGGATATGGA 474 || |||||||||||||||||||| || ||| |||| | ||| |||||||| || | Sbjct 500 GGAGATGTGTTTGTTTTTCCAATAGGTCTTATTCATTTTCAATTTAATGTGGG-TAAGAC 558 Query 475 -AATGCTGTTGCTGTTGCTGCTTTGAGTAGTCAGAATCCTGGTGTTATAAGCATTGCTAA 533 || |||||||| |||||| | |||||||| |||||||| || || | ||||| || Sbjct 559 TAAGGCTGTTGCATTTGCTGGACTCAGTAGTCAAAATCCTGGAGTCATCACTATTGCAAA 618 Query 534 TGTAGTTTTCGAATCAGAACCAGCCATAGCAAC-A-GATATTCTTGCCAAGGCTTTTCAA 591 || || || | |||||| ||| || || ||| | ||| ||||||| || || || ||| Sbjct 619 TGCGGTATTTGGATCAGATCCA-CC-TATTAACGATGATGTTCTTGCAAAAGCATTCCAA 676 Query 592 GTTGAT 597 |||||| Sbjct 677 GTTGAT 682 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24996973344 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5