BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: SL3.0ch00-12.fasta
           13 sequences; 828,076,956 total letters



Query= Untitled_sequence

Length=49
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

SL3.0ch04                                                             91.6    5e-18


>SL3.0ch04 
Length=66557038

 Score = 91.6 bits (49),  Expect = 5e-18
 Identities = 49/49 (100%), Gaps = 0/49 (0%)
 Strand=Plus/Minus

Query  1         ACAGAAATGGGAGTAAGGATTTCAGAAAGGGGAGACATAGTAAAAGGTG  49
                 |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  39493852  ACAGAAATGGGAGTAAGGATTTCAGAAAGGGGAGACATAGTAAAAGGTG  39493804



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 20701916100


  Database: SL3.0ch00-12.fasta
    Posted date:  Feb 21, 2025  12:54 PM
  Number of letters in database: 828,076,956
  Number of sequences in database:  13



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5