BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: N.benthamiana Genome v1.0.1 predicted proteins
           57,140 sequences; 18,711,326 total letters



Query= Untitled_sequence

Length=203
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Niben101Scf00313g01004.1sp|Q43792|ACCO_TOBAC *-*- 1-aminocyclopro...  101     7e-26


>Niben101Scf00313g01004.1 sp|Q43792|ACCO_TOBAC *-*- 1-aminocyclopropane-1-carboxylate oxidase 
IPR005123 (Oxoglutarate/iron-dependent dioxygenase), 
IPR027443 (Isopenicillin N synthase-like) GO:0016491 (oxidoreductase 
activity), GO:0016706 (oxidoreductase activity, acting 
on paired donors, with incorporation or reduction of molecular 
oxygen, 2-oxoglutarate as one donor, and incorporation 
of one atom each of oxygen into both donors), GO:0055114 (oxidation-reduction 
process)
Length=297

 Score = 101 bits (252),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 107/239 (45%), Positives = 123/239 (51%), Gaps = 68/239 (28%)

Query  17   CNWGVNHG---HVMDTVK--TKGHYKKCMRK-----VASKGAVAVTDDWSTRHVSNSVDD  66
             N  VNHG    VMDTV+  TKGHYKKCM +     VASKG  AV  +         ++ 
Sbjct  51   VNLLVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKESVASKGLEAVQAE---------IEK  101

Query  67   DYRVMRDAKRKADCNGKGYKK--AYGSKGN--GTKVSNY--CKD----KG-RAHTDAGG-  114
                + D   +     KGY K   YG+KG   GTKVSNY  C      KG RAHTDAGG 
Sbjct  102  LAEELLDLLCENLGLEKGYLKNVFYGTKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGI  161

Query  115  -----DDKVSG----KDG-W-DV--MRHSVV--NGD----VTNGKYKSV-HRVA--TDGT  152
                 DDKVSG    KDG W DV  MRHS+V   GD    +TNGKYKSV HRV   TDGT
Sbjct  162  ILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDLLEVITNGKYKSVMHRVITQTDGT  221

Query  153  RMSAS--YN-GSDAVYATV-----------KADCKVYKVDDYMK-YAGKAKRAMKARAD  196
            RMS +  YN GSD +               KA    +  DDYMK YAG   +A + R +
Sbjct  222  RMSLASFYNPGSDVLIFPAPTLVEKEAEESKAVYPKFVFDDYMKLYAGLKFQAKEPRFE  280



Lambda      K        H        a         alpha
   0.312    0.126    0.380    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1395887076


  Database: N.benthamiana Genome v1.0.1 predicted proteins
    Posted date:  Mar 21, 2024  4:04 PM
  Number of letters in database: 18,711,326
  Number of sequences in database:  57,140



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40