BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato genome chromosomes (build SL2.50) 13 sequences; 823,944,041 total letters Query= Untitled_sequence Length=810 Score E Sequences producing significant alignments: (Bits) Value SL2.50ch01No definition line found 1118 0.0 SL2.50ch10No definition line found 285 7e-75 >SL2.50ch01 No definition line found Length=98543444 Score = 1118 bits (605), Expect = 0.0 Identities = 735/799 (92%), Gaps = 3/799 (0%) Strand=Plus/Plus Query 1 ATGGCTGACGGGGAGCTGGAAATTTCTAACCAAGAAATGTTATCAAGTTCGAATTTTGGT 60 |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| Sbjct 97808392 ATGGCTGACGGGGAGCTGGACATTTCTACCCAAGAAATGTTGTCAAGTTCGAATTTTGGT 97808451 Query 61 GAATTTAGTAGCTCCATGGACAGCTTTTTCAATGAGATACTCAAGGATGCGCATGCTTGT 120 ||||||||||| || |||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct 97808452 GAATTTAGTAGTTCAATGGACAGTTTTTTCAATGAGATTCTCAAGGATGCGCATGCCTGT 97808511 Query 121 ACTCATGCTCACACTTGTAACCCGCCCGGTCCTGATAACTCCCATACCCATACTTGCTAC 180 |||||||| ||||||||||||||||| |||||||||||||| ||||| || ||||| ||| Sbjct 97808512 ACTCATGCCCACACTTGTAACCCGCCTGGTCCTGATAACTCTCATACTCACACTTGTTAC 97808571 Query 181 CATGTTCACACCAAAATAGTGCCTACCTCGGAAGACGATAAGAACCCCAGCGATGATACT 240 |||||||||||||||||||| ||||| | || ||||||||||||||||| ||||||||| Sbjct 97808572 CATGTTCACACCAAAATAGTTCCTACAACAGATGACGATAAGAACCCCAGTGATGATACT 97808631 Query 241 GCAGAGTCTGCGGAAAATAAAGGGAAGAAACGCCCGGCGGGTAATAAGGAAGCTGTTCGT 300 ||||||||||| || |||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 97808632 GCAGAGTCTGCAGAGAATAAAGGAAAGAAACGCCCGGTGGGTAATAAGGAAGCTGTTCGC 97808691 Query 301 AAGTATCGTGAGAAAAAGAAGGCTCGGGCTGCTTCATTAGAGGATGAAGTTGTGAGATTG 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 97808692 AAGTATCGTGAGAAAAAGAAGGCTCGGGCTGCTTCATTAGAGGATGAAGTTGTCAGATTG 97808751 Query 361 AGAGCTATAAATCAACAGCTGTTGAAGAGGCTGCAGGGTCAGGCTGTGTTGGAAGCGGAG 420 || |||||||| || || || |||||||||||||||||||||||||| |||||||||||| Sbjct 97808752 AGGGCTATAAACCAGCAACTCTTGAAGAGGCTGCAGGGTCAGGCTGTATTGGAAGCGGAG 97808811 Query 421 GTTGCTAGGCTTAAGTGCTTGCTCGTGGACATACGAGGAAGGATTGAAGGGGAAATTGGA 480 ||||||||||| ||||| ||||| ||||| ||||| |||||||||||||||||||||||| Sbjct 97808812 GTTGCTAGGCTCAAGTGTTTGCTTGTGGATATACGTGGAAGGATTGAAGGGGAAATTGGA 97808871 Query 481 TCATTTCCCTACCAGAAGCCCATGAAGAATGGCAATGCATATCAGCAAATAGTTAATCCT 540 |||||||| || |||||||||||||||| ||||||| |||||||||| |||||||||||| Sbjct 97808872 TCATTTCCATATCAGAAGCCCATGAAGAGTGGCAATACATATCAGCACATAGTTAATCCT 97808931 Query 541 AGCTTTCCTGGAGCATATGTGGTGAACTCCTGCAACCTGCAATGTGATGATCAGCTTTAT 600 | ||||||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||| Sbjct 97808932 AACTTTCCTGGTGCATATGTGGTGAACTCTTGCAACCTACAATGTGATGATCAGGTTTAT 97808991 Query 601 TGCCTCCACCCAGGTGCAGAAGGTAAAAGCTCAGACGGTACTGTAGTAAATGGACAAGGC 660 |||||||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct 97808992 TGCCTCCACCCAGGCGCAGAAGGTAAAAACTCAGACGGCACTGTATTAAATGGACAAGGC 97809051 Query 661 TTCAACAACTGTGAATTTGAGACTCTTCAATGCTTCGGTAATCAAACCTCTGAACTGGAG 720 |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| Sbjct 97809052 TTCAACAACTGTGAATTTGAGACTCTCCAATGCTTGGGTAATCAAACCTCTGGACTGGAG 97809111 Query 721 GAGGTTCCTGGGTGTACTGTGGGTAGTAGCACGCCTACTGCCAACA---CTGGTCGAAGC 777 ||||||||||| ||| |||||||| |||||| ||||||| ||||| ||||||||||| Sbjct 97809112 GAGGTTCCTGGATGTGTTGTGGGTAATAGCACACCTACTGACAACACTTCTGGTCGAAGC 97809171 Query 778 AAGAGAAGAGGTGAATTGA 796 ||||||| ||||||||||| Sbjct 97809172 AAGAGAAAAGGTGAATTGA 97809190 >SL2.50ch10 No definition line found Length=65527505 Score = 285 bits (154), Expect = 7e-75 Identities = 463/607 (76%), Gaps = 41/607 (7%) Strand=Plus/Plus Query 12 GGAGCTGGAAATTTCTAACCAAGAAATGTTATCAAGTTCGAATTTTGGTGAA-TT-TAG- 68 |||||| ||| | |||| |||| || |||| |||||||| | |||||||||| || || Sbjct 56914517 GGAGCTAGAATTCTCTAGCCAACAAGTGTTGTCAAGTTCTACTTTTGGTGAAATTCCAGA 56914576 Query 69 -T--AGCTCCATGGACA-GCTTTTTCAATGAGATACTCAAGGATGCGCATGCTTGTACTC 124 | ||| ||||| ||| || ||||||||| || |||| || | ||||||||||| || Sbjct 56914577 ATCAAGCCCCATGAACAAGC-GTTTCAATGAAATTCTCACTGACGTGCATGCTTGTATTC 56914635 Query 125 ATGCTCACACTTGTAACCCGCCCGGTCCTGATAACTCCCATACCCATACTTGCTACCATG 184 |||| |||||||| || || || |||||||||||||| || || || || || ||||||| Sbjct 56914636 ATGCCCACACTTGCAATCCACCTGGTCCTGATAACTCACACACACACACATGTTACCATG 56914695 Query 185 TTCACACCAAAATAGTGCCTAC-CTCGGAAGACGATAAGA-ACCCCAGCGATGATACTGC 242 |||||||||| | || ||| | | | | ||| || || | || | | | | | Sbjct 56914696 TTCACACCAAGGT--TG-TTACGCCCCCACG-TGAT--GATACTACTGC-A-G--AGT-C 56914744 Query 243 AGAGTCTGCGGAAAATAAAGGGAAGAAACGCCCGGCGGGTAATAAGGAAGCTGTTCGTAA 302 || | || | |||| ||| ||||||||| | | ||||||||||||| ||||| || Sbjct 56914745 -GA--CAGCAGCAAATGTAGGAAAGAAACGCTCATTGAGTAATAAGGAAGCAGTTCGCAA 56914801 Query 303 GTATCGTGAGAAAAAGAAGGCTCGGGCTGCTTCATTAGAGGATGAAGTTGTGAGATTGAG 362 ||| ||||||| || |||||||||| ||| ||||||||||| || || || || | || Sbjct 56914802 GTACTGTGAGAAGAAAAAGGCTCGGGTTGCATCATTAGAGGAAGAGGTGGTCAGGCTAAG 56914861 Query 363 AGCTATAAATCAACAGCTGTTGAAGAGGCTGCAGGGTCAGGCTGTGTTGGAAGCGGAGGT 422 | ||||||||| || ||||||| |||||||||||||| ||||| ||||| || ||||| Sbjct 56914862 GGATATAAATCAGCAATTGTTGAACAGGCTGCAGGGTCAAGCTGTCTTGGAGGCTGAGGT 56914921 Query 423 TGCTAGGCTTAAGTGCTTGCTCGTGGACATACGAGGAAGGATTGAAGGGGAAATTGGATC 482 | | ||||| ||||||||||| |||||||| ||||||||||||| ||| ||||||||||| Sbjct 56914922 TTCCAGGCTCAAGTGCTTGCTTGTGGACATCCGAGGAAGGATTGCAGGTGAAATTGGATC 56914981 Query 483 ATTTCCCTACCAGAAGCCCATGAAGAATGGCAATGCATATCAGCAAAT-AGTTAATCCTA 541 |||||| || || ||||| ||| || || |||| | | | | || || || || Sbjct 56914982 ATTTCCGTATCACAAGCCAATGGAG---GG---TGCAGA-C-GTATATCAG--AA-CC-- 56915028 Query 542 GCTTTCCTGGAGCATATGTGGTGAACTCCTGCAACCTGCAATGTGATGATCAGCTTTATT 601 ||| |||| | ||||| ||||| | |||||||| ||||||||||||||| |||||| Sbjct 56915029 ---TTCGTGGAACTTATGTTATGAACCCTTGCAACCTACAATGTGATGATCAGGTTTATT 56915085 Query 602 GCCTCCA 608 ||||||| Sbjct 56915086 GCCTCCA 56915092 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 644323955414 Database: Tomato genome chromosomes (build SL2.50) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 823,944,041 Number of sequences in database: 13 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5