BLASTP 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: N.tabacum BX protein sequences 86,009 sequences; 32,278,096 total letters Query= Untitled_sequence Length=561 Score E Sequences producing significant alignments: (Bits) Value mRNA_21211_cdsmRNA_21211 gene_12271|id=AT3G19820.3:evalue=0.0:ann... 942 0.0 mRNA_86760_cdsmRNA_86760 gene_51312|id=AT3G19820.3:evalue=0.0:ann... 917 0.0 mRNA_45719_cdsmRNA_45719 gene_26724|id=AT3G19820.3:evalue=1e-175:... 490 1e-172 mRNA_53115_cdsmRNA_53115 gene_31081|id=AT3G19820.3:evalue=3e-92:a... 281 1e-92 mRNA_124841_cdsmRNA_124841 gene_74526|id=AT3G19820.3:evalue=2e-52... 174 3e-52 mRNA_124842_cdsmRNA_124842 gene_74526|id=AT3G19820.3:evalue=7e-50... 167 1e-49 >mRNA_21211_cds mRNA_21211 gene_12271|id=AT3G19820.3:evalue=0.0:annot='cell elongation protein / DWARF1 / DIMINUTO (DIM)';id=Solyc02g030170.2.1:evalue=0.0:annot='FAD linked oxidase domain protein' Length=568 Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/564 (81%), Positives = 508/564 (90%), Gaps = 4/564 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSDL+ PL RPKRKK VDY V+FRWIIVIF VLP S +YF IYLGD+ S+ KSF+KRQ Sbjct 1 MSDLEVPL-RPKRKKNLVDYLVQFRWIIVIFFVLPLSFLYYFSIYLGDVRSDCKSFKKRQ 59 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHD+NVKKV+KRLK R+ASKDGLVCTARKPW+AVGMRNVDYKRARHFEVDL FRN+L+ Sbjct 60 KEHDDNVKKVVKRLKERNASKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNVLD 119 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+KE+M ARVEPLVNMGQISR TVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF Sbjct 120 IDKERMVARVEPLVNMGQISRVTVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 179 Query 181 ADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRLTY 240 +DTV +YEI+LA G++VRAT+DNEYSDL+YAIPWSQGTLGLLV+AEI+LI +KEYM+LTY Sbjct 180 SDTVVSYEIILADGQVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTY 239 Query 241 IPVKGDLQALAQGYIDSFAPKDGDKS---KIPDFVEGMVYNPTEGVMMVGTYASKEEAKK 297 PV G+LQ +AQ YIDSFAP+DGD+ K+PDFVE MVYNPTE V M G YASKEEAK+ Sbjct 240 KPVVGNLQEIAQAYIDSFAPRDGDQDNPDKVPDFVETMVYNPTEAVCMTGRYASKEEAKQ 299 Query 298 KGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGDQF 357 KGN IN+VGWWFKPWFYQHAQTALK+G+FVEYIPTREYYHRHTRCLYWEGKLILPFGDQ+ Sbjct 300 KGNVINSVGWWFKPWFYQHAQTALKRGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQW 359 Query 358 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEVYP 417 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQD+LVPLYKVGDALEWVHREMEVYP Sbjct 360 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDLLVPLYKVGDALEWVHREMEVYP 419 Query 418 IWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDGSE 477 IWLCPH+L++ P+K +YPEPGFE RQGD+ AQMYTDVGVYYAPG VLRGE +DG+E Sbjct 420 IWLCPHRLYRLPLKTMVYPEPGFELHRRQGDSPYAQMYTDVGVYYAPGPVLRGEVYDGAE 479 Query 478 AVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFMSVYYKSKK 537 AVR++E WLIENHGFQPQYAVSEL EK+FWRMF+G LYE CRKKYRAIGTFMSVYYKSKK Sbjct 480 AVRQLENWLIENHGFQPQYAVSELTEKNFWRMFDGGLYEHCRKKYRAIGTFMSVYYKSKK 539 Query 538 GRKTEKEVREAEQAHLETAYAEAD 561 G+KTEKEV++AEQ E E D Sbjct 540 GKKTEKEVQDAEQETAELETPEVD 563 >mRNA_86760_cds mRNA_86760 gene_51312|id=AT3G19820.3:evalue=0.0:annot='cell elongation protein / DWARF1 / DIMINUTO (DIM)';id=Solyc02g069490.2.1:evalue=0.0:annot='FAD linked oxidase domain protein' Length=570 Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/548 (79%), Positives = 487/548 (89%), Gaps = 4/548 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSD + PL PKRKK VD+ ++FRWIIVI VLPFS FYF IYLGD+ SE KS+E+RQ Sbjct 1 MSDAKAPL-HPKRKKQVVDFLLQFRWIIVIVFVLPFSFLFYFSIYLGDVKSERKSYEQRQ 59 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHDENVK+V+KRL RDASKDGLVCT R PW+ VGMRNVDYKRARHFEVDL +FRNILE Sbjct 60 KEHDENVKEVVKRLGERDASKDGLVCTGRPPWVVVGMRNVDYKRARHFEVDLSKFRNILE 119 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+KE+M ARVEPLVNMGQISR TVP+NLSLAV+AELDDLTVGGLING+GIEGSSHI+GLF Sbjct 120 IDKERMIARVEPLVNMGQISRVTVPINLSLAVLAELDDLTVGGLINGFGIEGSSHIFGLF 179 Query 181 ADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRLTY 240 +DTV A EIVLA G +VRAT+DNEYSDL+YAIPWSQGTLGLLV+AEI+LI+VKEY+RLTY Sbjct 180 SDTVVALEIVLADGRVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIQVKEYVRLTY 239 Query 241 IPVKGDLQALAQGYIDSFAPKDGDK---SKIPDFVEGMVYNPTEGVMMVGTYASKEEAKK 297 PV G+L+ LAQ Y DSFAP+DGD+ SK+P+ VEGM+Y+PTEGVMM G YASK+EAK+ Sbjct 240 KPVTGNLKELAQAYADSFAPRDGDQDNPSKVPEMVEGMIYSPTEGVMMTGRYASKQEAKQ 299 Query 298 KGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGDQF 357 KGN INN GWWFKPWFYQHAQTALK+G+FVEYIPTR+YYHRHTR LYWEGKLILPFGDQF Sbjct 300 KGNVINNYGWWFKPWFYQHAQTALKRGEFVEYIPTRDYYHRHTRSLYWEGKLILPFGDQF 359 Query 358 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEVYP 417 WFR+LLGWLMPPK++LLKATQ EAIRNYYHD HVIQD+LVPLYKVGD LEWVHREMEVYP Sbjct 360 WFRFLLGWLMPPKIALLKATQSEAIRNYYHDHHVIQDLLVPLYKVGDCLEWVHREMEVYP 419 Query 418 IWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDGSE 477 IWLCPH+++K P+K IYPEPGFE RQGDTE AQMYTD+GVYY PG VLRGE FDG+E Sbjct 420 IWLCPHRIYKLPVKPMIYPEPGFEAHRRQGDTEYAQMYTDIGVYYVPGAVLRGEPFDGAE 479 Query 478 AVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFMSVYYKSKK 537 R++E WLIENHGFQ QYAV+EL EK+FWRMF+ LYE+CRKKY+AIGTFMS YYKSKK Sbjct 480 KCRQLELWLIENHGFQAQYAVTELTEKNFWRMFDNSLYEQCRKKYKAIGTFMSAYYKSKK 539 Query 538 GRKTEKEV 545 GRKTEKEV Sbjct 540 GRKTEKEV 547 >mRNA_45719_cds mRNA_45719 gene_26724|id=AT3G19820.3:evalue=1e-175:annot='cell elongation protein / DWARF1 / DIMINUTO (DIM)';id=Solyc02g069490.2.1:evalue=0.0:annot='FAD linked oxidase domain protein' Length=293 Score = 490 bits (1262), Expect = 1e-172, Method: Compositional matrix adjust. Identities = 223/274 (81%), Positives = 248/274 (91%), Gaps = 0/274 (0%) Query 272 VEGMVYNPTEGVMMVGTYASKEEAKKKGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIP 331 VEGM+Y+PTEGVMM G YASK+EAK++GN INN GWWFKPWFYQHAQTALK+G+FVEYIP Sbjct 2 VEGMIYSPTEGVMMTGRYASKQEAKQRGNVINNYGWWFKPWFYQHAQTALKRGEFVEYIP 61 Query 332 TREYYHRHTRCLYWEGKLILPFGDQFWFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHV 391 TR+YYHRHTR LYWEGKLILPFGDQFWFR+LLGWLMPPK++LLKATQ EAIRNYYHD HV Sbjct 62 TRDYYHRHTRSLYWEGKLILPFGDQFWFRFLLGWLMPPKIALLKATQSEAIRNYYHDHHV 121 Query 392 IQDMLVPLYKVGDALEWVHREMEVYPIWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTED 451 IQD+LVPLYKVGD LEWVHREMEVYPIWLCPH+++K P+K IYPEPGFE RQGDTE Sbjct 122 IQDLLVPLYKVGDCLEWVHREMEVYPIWLCPHRIYKLPVKPMIYPEPGFEAHRRQGDTEY 181 Query 452 AQMYTDVGVYYAPGCVLRGEEFDGSEAVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFN 511 AQMYTD+GVYY PG VLRGE FDG+E R++E WLIENHGFQ QYAV+EL EK+FWRMF+ Sbjct 182 AQMYTDIGVYYVPGAVLRGEPFDGAEKCRQLELWLIENHGFQAQYAVTELTEKNFWRMFD 241 Query 512 GELYEECRKKYRAIGTFMSVYYKSKKGRKTEKEV 545 LYE+CRKKY+AIGTFMS YYKSKKGRKTEKEV Sbjct 242 NTLYEQCRKKYKAIGTFMSAYYKSKKGRKTEKEV 275 >mRNA_53115_cds mRNA_53115 gene_31081|id=AT3G19820.3:evalue=3e-92:annot='cell elongation protein / DWARF1 / DIMINUTO (DIM)';id=Solyc02g030170.2.1:evalue=4e-90:annot='FAD linked oxidase domain protein' Length=137 Score = 281 bits (718), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 128/137 (93%), Positives = 134/137 (98%), Gaps = 0/137 (0%) Query 285 MVGTYASKEEAKKKGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLY 344 M G YASKEEAK+KGN IN+VGWWFKPWFYQHAQTALK+G+FVEYIPTREYYHRHTRCLY Sbjct 1 MTGRYASKEEAKQKGNVINSVGWWFKPWFYQHAQTALKRGEFVEYIPTREYYHRHTRCLY 60 Query 345 WEGKLILPFGDQFWFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGD 404 WEGKLILPFGDQ+WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQD+LVPLYKVGD Sbjct 61 WEGKLILPFGDQWWFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDLLVPLYKVGD 120 Query 405 ALEWVHREMEVYPIWLC 421 ALEWVHREMEVYPIWLC Sbjct 121 ALEWVHREMEVYPIWLC 137 >mRNA_124841_cds mRNA_124841 gene_74526|id=AT3G19820.3:evalue=2e-52:annot='cell elongation protein / DWARF1 / DIMINUTO (DIM)';id=Solyc02g030170.2.1:evalue=2e-59:annot='FAD linked oxidase domain protein' Length=106 Score = 174 bits (442), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 84/107 (79%), Positives = 94/107 (88%), Gaps = 1/107 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSDL+ PL RPKRKK VDY V+FRWIIVIF VLP S +YF IYLGD+ S+ KSF+KRQ Sbjct 1 MSDLEVPL-RPKRKKNLVDYLVQFRWIIVIFFVLPLSFLYYFSIYLGDVRSDCKSFKKRQ 59 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARH 107 KEHD+NVKKV+KRLK R+ASKDGLVCTARKPW+AVGMRNVDYKRARH Sbjct 60 KEHDDNVKKVVKRLKERNASKDGLVCTARKPWVAVGMRNVDYKRARH 106 >mRNA_124842_cds mRNA_124842 gene_74526|id=AT3G19820.3:evalue=7e-50:annot='cell elongation protein / DWARF1 / DIMINUTO (DIM)';id=Solyc02g030170.2.1:evalue=7e-57:annot='FAD linked oxidase domain protein' Length=103 Score = 167 bits (424), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 81/104 (78%), Positives = 91/104 (88%), Gaps = 1/104 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSDL+ PL RPKRKK VDY V+FRWIIVIF VLP S +YF IYLGD+ S+ KSF+KRQ Sbjct 1 MSDLEVPL-RPKRKKNLVDYLVQFRWIIVIFFVLPLSFLYYFSIYLGDVRSDCKSFKKRQ 59 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKR 104 KEHD+NVKKV+KRLK R+ASKDGLVCTARKPW+AVGMRNVDYKR Sbjct 60 KEHDDNVKKVVKRLKERNASKDGLVCTARKPWVAVGMRNVDYKR 103 Lambda K H a alpha 0.321 0.138 0.430 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 10228993650 Database: N.tabacum BX protein sequences Posted date: Mar 21, 2024 3:19 PM Number of letters in database: 32,278,096 Number of sequences in database: 86,009 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40