BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome cDNA (ITAG release 2.40) 34,725 sequences; 41,981,568 total letters Query= Solyc07g063970.2 Length=2754 Score E Sequences producing significant alignments: (Bits) Value Solyc07g063970.2Transcription factor (Fragment) (AHRD V1 *-** D6M... 2128 0.0 Solyc02g079920.2Transcription factor (Fragment) (AHRD V1 *-** D6M... 207 3e-52 >Solyc07g063970.2 Transcription factor (Fragment) (AHRD V1 *-** D6MKQ1_9ASPA); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type Length=1975 Score = 2128 bits (1152), Expect = 0.0 Identities = 1152/1152 (100%), Gaps = 0/1152 (0%) Strand=Plus/Plus Query 1 CTTCTTCTTCTTCATGGGTTTCTAGTTAGATTTTCTGAAGTGACTTTAATTTTTTTTTGT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTTCTTCTTCTTCATGGGTTTCTAGTTAGATTTTCTGAAGTGACTTTAATTTTTTTTTGT 60 Query 61 AAAGTTTTGATTTTTTTTTCTCTGGCATTTTGAATGTTGTTTTGGGGTTGTCTTCTTGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAAGTTTTGATTTTTTTTTCTCTGGCATTTTGAATGTTGTTTTGGGGTTGTCTTCTTGAG 120 Query 121 AGTAATGGGTGTTCACTGTTGTTTTCTGATAGCTAAAAAAAGGGATTTTTACTAACTTTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGTAATGGGTGTTCACTGTTGTTTTCTGATAGCTAAAAAAAGGGATTTTTACTAACTTTT 180 Query 181 TTGGTGTTTGTAGTTGGGATTTTCTTGAAGTGAGTTTAATTTGTGTAAAGTTTTAATCTT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTGGTGTTTGTAGTTGGGATTTTCTTGAAGTGAGTTTAATTTGTGTAAAGTTTTAATCTT 240 Query 241 TTTCAAGGCATTTTGAGGAATGCTGTGTGGGGTTTGTTTTCTGATAGTTAAAAAAGAAGC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TTTCAAGGCATTTTGAGGAATGCTGTGTGGGGTTTGTTTTCTGATAGTTAAAAAAGAAGC 300 Query 301 ATTTTTCATAAGTAGATAATGTCAGTCAAGAATAGAAAGATATCTTCTTGACTAACTTTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ATTTTTCATAAGTAGATAATGTCAGTCAAGAATAGAAAGATATCTTCTTGACTAACTTTT 360 Query 361 TTGAGTTTCAGGGGGGGTGGAAAAAGATGATAGCTTTAGGAAAGTTCATTTCTTTTAGAA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TTGAGTTTCAGGGGGGGTGGAAAAAGATGATAGCTTTAGGAAAGTTCATTTCTTTTAGAA 420 Query 421 AGTTATCTGAGTATAAGTAGAGGAAAAGTTACATTTTTTTAGTTATATTGAAGGGTTGTT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 AGTTATCTGAGTATAAGTAGAGGAAAAGTTACATTTTTTTAGTTATATTGAAGGGTTGTT 480 Query 481 GAAAAGATAGAATCTTGAAAATGGGGGAGAAGAAGAATATGCCAGCAGTTTGGTTTACTT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GAAAAGATAGAATCTTGAAAATGGGGGAGAAGAAGAATATGCCAGCAGTTTGGTTTACTT 540 Query 541 TAAAGAGATCTTTGCATTGTAAATCAGGGCCATCAGATGTTCATGACCCAAAAACAAGAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TAAAGAGATCTTTGCATTGTAAATCAGGGCCATCAGATGTTCATGACCCAAAAACAAGAA 600 Query 601 AAGAGTTGAGCACAATTTTGACCAAAAAGGGAGGAGGAAGGTCTGGTTGTTCAAGGTCTA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AAGAGTTGAGCACAATTTTGACCAAAAAGGGAGGAGGAAGGTCTGGTTGTTCAAGGTCTA 660 Query 661 TAGCAAATCTTAAAGATGTAATCCATGGAAGTAAAAGACATTTGGATAAACCACCTAGTT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TAGCAAATCTTAAAGATGTAATCCATGGAAGTAAAAGACATTTGGATAAACCACCTAGTT 720 Query 721 GTAGTCCAAGATCTATTGGTAGTAGTGAGTTTATTAATCCAATAACTCATGAAGTTATTC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 GTAGTCCAAGATCTATTGGTAGTAGTGAGTTTATTAATCCAATAACTCATGAAGTTATTC 780 Query 781 TGAGTAATTCAAGATGTGAGCTGAAAATCACTAGTTTTAATGGATTTCAAGAAAGTGGTA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 TGAGTAATTCAAGATGTGAGCTGAAAATCACTAGTTTTAATGGATTTCAAGAAAGTGGTA 840 Query 841 ATGGGGGTGGAGGTGGGGTGAGTACTAATGATGGTTCAACTTTTGTGGGTACTTTAAGGC 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 ATGGGGGTGGAGGTGGGGTGAGTACTAATGATGGTTCAACTTTTGTGGGTACTTTAAGGC 900 Query 901 CTGGTACACCAGGTCCAGGAGGACACCCTACAATGCATTATTTCAATTCTGGTTGTAGGA 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CTGGTACACCAGGTCCAGGAGGACACCCTACAATGCATTATTTCAATTCTGGTTGTAGGA 960 Query 961 ATACTCCTACAAGGAGGAGTACATCTTTTCTTGTTGATAAAGAAGGACATACAAGTAGTA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 ATACTCCTACAAGGAGGAGTACATCTTTTCTTGTTGATAAAGAAGGACATACAAGTAGTA 1020 Query 1021 TTGCTTCTAAAACTAGGTATTCACTTGATAATGATGTTAATGGAACTTCTTCTGGGGTCA 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 TTGCTTCTAAAACTAGGTATTCACTTGATAATGATGTTAATGGAACTTCTTCTGGGGTCA 1080 Query 1081 CATGTCATAAGTGTGGAGAGCAATTTGGGAAATGGGAAGCTCTTGAAGAGCATCATCTTT 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CATGTCATAAGTGTGGAGAGCAATTTGGGAAATGGGAAGCTCTTGAAGAGCATCATCTTT 1140 Query 1141 CTAAGCATGCTG 1152 |||||||||||| Sbjct 1141 CTAAGCATGCTG 1152 Score = 1522 bits (824), Expect = 0.0 Identities = 824/824 (100%), Gaps = 0/824 (0%) Strand=Plus/Plus Query 1931 GTGAGTGAACTTTTGGAGGGTGATTCTTCAAGGAAGATTGTAGAAATAATCTGTCGCTCA 1990 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1152 GTGAGTGAACTTTTGGAGGGTGATTCTTCAAGGAAGATTGTAGAAATAATCTGTCGCTCA 1211 Query 1991 AGCTGGTTAAAATCCGAGAGCCAAGTTGGACGGATTGAAAGGATCTTGAAAGTTCATAAC 2050 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1212 AGCTGGTTAAAATCCGAGAGCCAAGTTGGACGGATTGAAAGGATCTTGAAAGTTCATAAC 1271 Query 2051 ACACAGAAAACTCTGGCTCGATTTGAAGAATATAGGGAGATGGTGAAGAACAAAGCAAGT 2110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1272 ACACAGAAAACTCTGGCTCGATTTGAAGAATATAGGGAGATGGTGAAGAACAAAGCAAGT 1331 Query 2111 AAGCTCCCTAAGAAGCATCCTCGATGTATAGCTGATGGAAATGAACTTTTAAGGTTCTAT 2170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1332 AAGCTCCCTAAGAAGCATCCTCGATGTATAGCTGATGGAAATGAACTTTTAAGGTTCTAT 1391 Query 2171 GGAACTACTTTGGCTTGCGGCCTTGGCATGAACGGATCCTGCTGTCTCTGTATATCTGAT 2230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1392 GGAACTACTTTGGCTTGCGGCCTTGGCATGAACGGATCCTGCTGTCTCTGTATATCTGAT 1451 Query 2231 AAATGCTGCGTCTGTCGAATTATCAGAAACGGTTTCTCCACAAAGAAGGAACTCAAAGGC 2290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1452 AAATGCTGCGTCTGTCGAATTATCAGAAACGGTTTCTCCACAAAGAAGGAACTCAAAGGC 1511 Query 2291 GGGATTGGCGTCTTCACCACTTCCACAAGTGGAAGTGCTTATGAATGCATCGAGATGAGT 2350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1512 GGGATTGGCGTCTTCACCACTTCCACAAGTGGAAGTGCTTATGAATGCATCGAGATGAGT 1571 Query 2351 GAAGATGATCCATCCTTAAGAAAAGCATTAATCGTCTGCAGAGTAGTTGCAGGTCGAGTG 2410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1572 GAAGATGATCCATCCTTAAGAAAAGCATTAATCGTCTGCAGAGTAGTTGCAGGTCGAGTG 1631 Query 2411 CATAGGCCACTAGAGAACATTCAAGAAATGGCTGGCCAAACTGGGTTTGATTCTTTGGCA 2470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1632 CATAGGCCACTAGAGAACATTCAAGAAATGGCTGGCCAAACTGGGTTTGATTCTTTGGCA 1691 Query 2471 GGTAAGGTTGGCGTGTACTCGAACATAGAGGAGCTTTACTTGCTTAACCCCAAGGCTCTT 2530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1692 GGTAAGGTTGGCGTGTACTCGAACATAGAGGAGCTTTACTTGCTTAACCCCAAGGCTCTT 1751 Query 2531 CTTCCTTGTTTTGTGGTAATCTGCAAAGCCTAAGGAAAAAGAATAAGACATGGTAGAATG 2590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1752 CTTCCTTGTTTTGTGGTAATCTGCAAAGCCTAAGGAAAAAGAATAAGACATGGTAGAATG 1811 Query 2591 TTTGAATTAGTAGTGAGACTTCGCGTCACGTATAGGATTCTCTTTTCGACATGTTCTGCA 2650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1812 TTTGAATTAGTAGTGAGACTTCGCGTCACGTATAGGATTCTCTTTTCGACATGTTCTGCA 1871 Query 2651 GGAATTTTTGGTTCTTGGAGTCCAAATTCTTACTTCCTGCATATTTCTGTATCTGTTATT 2710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1872 GGAATTTTTGGTTCTTGGAGTCCAAATTCTTACTTCCTGCATATTTCTGTATCTGTTATT 1931 Query 2711 ACCAAAAATTTGGCAAAGCAAGATGATCAAAAAGTTTCATTGAT 2754 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1932 ACCAAAAATTTGGCAAAGCAAGATGATCAAAAAGTTTCATTGAT 1975 >Solyc02g079920.2 Transcription factor (Fragment) (AHRD V1 *-** D6MKQ1_9ASPA); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type Length=1677 Score = 207 bits (112), Expect = 3e-52 Identities = 467/639 (73%), Gaps = 21/639 (3%) Strand=Plus/Plus Query 1931 GTGAGTGAACTT-TTGGAGGGTGATTCTTCAAGGAAGATTGTAGAAATAATCTGTCGCTC 1989 |||| |||||| ||| |||| |||||||| ||||| || ||||| ||||| || | | Sbjct 895 GTGACAGAACTTGTTGAAGGG-GATTCTTCGAGGAAAATCGTAGAGATAATATGCAGAAC 953 Query 1990 AAGCTGGTTAAAATCC-GAGAGCCAAGTT-GGACGG-ATTGAAAGGATCTTGAAAGTTCA 2046 ||||| ||| ||| || || | | |||| | || ||||| || |||||||||||||| Sbjct 954 AAGCT-GTTCAAAGCCTGA-AAAC-AGTTCAAATGGTATTGAGAGAATCTTGAAAGTTCA 1010 Query 2047 TAACACACAGAAAACTCTGGCTCGATTTGAAGAATATAGGGAGATGGTGAAGAACAAAGC 2106 || | |||||| || |||| ||| || |||||| | || | || |||| |||||| Sbjct 1011 CAATATGCAGAAAGTACTAGCTCAATTCGAGGAATATCGCGAATTAGTAAAGATCAAAGC 1070 Query 2107 AAGTAAGCTCCCTAAGAAGCATCCTCGATGTATAGCTGATGGAAATGAACTTTTAAGGTT 2166 ||||| ||| | ||||| || ||||| || |||| ||||| ||||| |||||||| || Sbjct 1071 CAGTAAACTCGCCAAGAAACACCCTCGTTGCTTAGCGGATGGGAATGAGCTTTTAAGATT 1130 Query 2167 CTATGGAACTACTTTGGCTTGCGGCCTTGGCATGAACGGATCCTGCT-GTCTCTGTATAT 2225 || ||| || ||| | | || |||||||||||| | || | || | || |||| || Sbjct 1131 CTTTGGCACAACTGTTGAATGTTCTCTTGGCATGAACAGCTC-TTCTAGCCTATGTACAT 1189 Query 2226 CTGATAAATGCTGCGTCTGTCGAATTATCAGAAAC-GGTTTCTCCACAAAGAAGGAACTC 2284 | || |||||| || || | ||| | | || || ||||| | ||||||||| | Sbjct 1190 CAGAAAAATGCAAAGTTTGCAGGATT-TTACAACGTGGATTCTCAATCAAGAAGGAAATA 1248 Query 2285 AAAGGCGGGATTGGCGTCTTCACCACTTCCACAAGTGGAAGTGCT-TATGAATGCATCGA 2343 || || ||| |||| || || || |||||||||||||||| || || ||| ||| || Sbjct 1249 AATGGTGGGGTTGGTGTTTTTACAGCTTCCACAAGTGGAAGAGCACTA-GAAGCCATTGA 1307 Query 2344 G-A---TGAGTGAAGATGATCC-ATCCTTAAGAAAAGCATTAATCGTCTGCAGAGTAGTT 2398 | | ||| |||| || || | ||| | ||||| || |||| || ||||||||| || Sbjct 1308 GGAAAATGA-TGAAAAT-ATACTATCTTGTAGAAAGGCTCTAATAGTATGCAGAGTAATT 1365 Query 2399 GCAGGTCGAGTGCATAGGCCACTAGAGAACATTCAAGAAATGGCTGGCCAAACTGGGTTT 2458 || ||| |||||||||| ||| | || || |||||||| || || ||| | || ||| Sbjct 1366 GCTGGTAGAGTGCATAGACCATTGGAAAATGTTCAAGAATTGATGGGTCAATCAGGATTT 1425 Query 2459 GATTCTTTGGCAGGTAAGGTTGGCGTGTACTCGAACATAGAGGAGCTTTACTTGCTTAAC 2518 ||||| ||||| || || ||||| | ||||| ||||| || || || || ||||| | Sbjct 1426 GATTCATTGGCTGGCAAAGTTGGACTTTACTCAAACATTGAAGAACTCTATTTGCTCAGT 1485 Query 2519 CCCAAGGCTCTTCTTCCTTGTTTTGTGGTAATCTGCAAA 2557 || || ||| | |||||||| |||||||| || |||||| Sbjct 1486 CCTAAAGCTTTGCTTCCTTGCTTTGTGGTGATTTGCAAA 1524 Score = 206 bits (111), Expect = 1e-51 Identities = 251/319 (79%), Gaps = 8/319 (3%) Strand=Plus/Plus Query 510 AAGAAGAATATGCCAGCAGTTTGGTTTACTTTAAAGAGATCTTTGCATTGTAAATCAGGG 569 || || || |||||||||||||||||| ||||||||| ||| ||||| |||| ||||| | Sbjct 256 AAAAAAAAAATGCCAGCAGTTTGGTTTGCTTTAAAGAAATCATTGCAGTGTAGATCAGAG 315 Query 570 CCATCAGATGTTCATGACCCAAAAAC--AAG-AAAAGAGTTGAGCACAATTTTGACCAAA 626 | |||||| |||| |||| || ||| ||| | || |||| || | ||| ||| Sbjct 316 ATAAAAGATGTGTATGATCCAAGAAGTGAAGGGAAAAATTTAAGCAAGATATCGACGAAA 375 Query 627 AAGG-GAGG--AGGAAGGTCTGGTTGTTCAAGGTCTATAGCAAATCTTAAAGATGTAATC 683 |||| || | ||| ||||| ||||||||||| || || |||||||| |||||||| || Sbjct 376 AAGGCGACGACAGGTAGGTCAGGTTGTTCAAGATCAATTGCAAATCTGAAAGATGTTATA 435 Query 684 CATGGAAGTAAAAGACATTTGGATAAACCACCTAGTTGT-AGTCCAAGATCTATTGGTAG 742 |||||||||||||| ||| |||| || ||||| | | ||||||||||||||||| || Sbjct 436 CATGGAAGTAAAAGGCATATGGAGAAGCCACC-ATTACAGAGTCCAAGATCTATTGGAAG 494 Query 743 TAGTGAGTTTATTAATCCAATAACTCATGAAGTTATTCTGAGTAATTCAAGATGTGAGCT 802 |||||| || | |||||||| || ||||||||| || |||||||||||| ||||| || Sbjct 495 CAGTGAGCTTTTGAATCCAATTACACATGAAGTTGTTTTGAGTAATTCAACTTGTGAACT 554 Query 803 GAAAATCACTAGTTTTAAT 821 || || ||||||| |||| Sbjct 555 CAAGATTACTAGTTGTAAT 573 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 112062742704 Database: Tomato Genome cDNA (ITAG release 2.40) Posted date: Mar 21, 2024 3:33 PM Number of letters in database: 41,981,568 Number of sequences in database: 34,725 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5