BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=952 Score E Sequences producing significant alignments: (Bits) Value Solyc04g011510.4.1 1328 0.0 Solyc06g005490.3.1 455 3e-127 Solyc01g111120.4.1 69.4 4e-11 >Solyc04g011510.4.1 Length=774 Score = 1328 bits (719), Expect = 0.0 Identities = 729/733 (99%), Gaps = 3/733 (0%) Strand=Plus/Plus Query 175 AATGC--AATGGAACCAGTGAAGAGATCAAGAAGATTGTAGCGACACTCAATGCTGGTCA 232 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42 AATGCAGAATGGAACCAGTGAAGAGATCAAGAAGATTGTAGCGACACTCAATGCTGGTCA 101 Query 233 AGTGCCATCACAAGATGTTGTTGAGGTTGTTGTGAGCCCTCCATTTGTATTTCTTCCTCT 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102 AGTGCCATCACAAGATGTTGTTGAGGTTGTTGTGAGCCCTCCATTTGTATTTCTTCCTCT 161 Query 293 GGTCAAGAGTGAGCTGCGATCTGATTTTCATGTTGCTGCCCAAAATTGTTGGGTTAAGAA 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 GGTCAAGAGTGAGCTGCGATCTGATTTTCATGTTGCTGCCCAAAATTGTTGGGTTAAGAA 221 Query 353 TGGCGGTGCTTTCACCGGTGAAGTTAGTGCTAATATGCTTGTTAATCTGAGCATTCCATG 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 TGGCGGTGCTTTCACCGGTGAAGTTAGTGCTAATATGCTTGTTAATCTGAGCATTCCATG 281 Query 413 GGTTATTTTGGGTCATTCTGAAAGAAGAGCCATTTTAGGTGAATCAAATGAGTTTGTTGG 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282 GGTTATTTTGGGTCATTCTGAAAGAAGAGCCATTTTAGGTGAATCAAATGAGTTTGTTGG 341 Query 473 AGACAAGGTAGCATATGCTCTTTCTCAAGGTTTGAAGGTAATTGCATGTGTTGGGGAGAC 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 342 AGACAAGGTAGCATATGCTCTTTCTCAAGGTTTGAAGGTAATTGCATGTGTTGGGGAGAC 401 Query 533 TCTTGAGCAAAGAGAATCAGGATCCACCATGGCTGTTGTTGCAGCACAAACAAAGGCTAT 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 402 TCTTGAGCAAAGAGAATCAGGATCCACCATGGCTGTTGTTGCAGCACAAACAAAGGCTAT 461 Query 593 TGCAGACCGAGTAAAAGATTGGTCAAATGTGGTGATAGCTTATGAGCCTGTTTGGGCTAT 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 462 TGCAGACCGAGTAAAAGATTGGTCAAATGTGGTGATAGCTTATGAGCCTGTTTGGGCTAT 521 Query 653 TGGTACTGGAAAGGTTGCAACCCCTGCACAAGCCCAGGAAGTACATGCTGAATTGAGGAA 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 522 TGGTACTGGAAAGGTTGCAACCCCTGCACAAGCCCAGGAAGTACATGCTGAATTGAGGAA 581 Query 713 ATGGCTTCAAGCAAATGTTAGCGCTGAAGTTGCTGCTTCAACCAGGATCATCTATGGAGG 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 582 ATGGCTTCAAGCAAATGTTAGCGCTGAAGTTGCTGCTTCAACCAGGATCATCTATGGAGG 641 Query 773 ATCTGTAAGCGGTGCCAACTGCAAGGAGTTGGCTGGACAGCCAGATGTTGACGGTTTTCT 832 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 642 ATCTGTAAGCGGTGCCAACTGCAAGGAGTTGGCTGGACAGCCAGATGTTGACGGTTTTCT 701 Query 833 TGTAGGTGGAGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAAGGCTGCTGAGGGGAA 892 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 702 TGTAGGTGGAGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAAGGCTGCTGAGGTGAA 761 Query 893 GAAAA-CGCCTAA 904 ||||| ||||||| Sbjct 762 GAAAAGCGCCTAA 774 >Solyc06g005490.3.1 Length=774 Score = 455 bits (246), Expect = 3e-127 Identities = 584/748 (78%), Gaps = 20/748 (3%) Strand=Plus/Plus Query 141 ATGGGCAGAACTTTCTTCGTCGGCGGTAACTGGAAATGCAATGGAACCAGT-GAAGAGAT 199 |||| ||||| |||||||||||||| ||||||||||||||||||||| || || || | Sbjct 1 ATGGCCAGAAAGTTCTTCGTCGGCGGCAACTGGAAATGCAATGGAACC-GTGGAGGAAGT 59 Query 200 CAAGAAGATTGTAGCGACACT---CAATGCTGGTCAAGTGCCATCACAAGATGTTGTTGA 256 || || ||||| | ||| | || || || |||| ||||| | ||||||||||| Sbjct 60 GAAAAAAATTGTGACCACATTGAGTAAGGC-GG--AAGTTCCATCTGAGGATGTTGTTGA 116 Query 257 GGTTGTTGTGAGCCCTCCATTTGTATTTCTTCCTCTGGTCAAGA-GTGAGCTGCGATC-T 314 |||||| | || |||||||||||||||||||| ||||||| | | | |||| || | Sbjct 117 GGTTGTCATTAGTCCTCCATTTGTATTTCTTCCCTTGGTCAAAACCTTA-TTGCG-TCGT 174 Query 315 GATTT-TCATGTTGCTGCCCAAAATTGTTGGGTTAAGAATGGCGGTGCTTTCACCGGTGA 373 ||||| || ||||||| ||||| || ||||| | ||| || ||||| || || || || Sbjct 175 GATTTCTCCA-TTGCTGCACAAAACTGCTGGGTAAGGAAAGGAGGTGCATTTACTGGGGA 233 Query 374 AGTTAGTGCTAATATGCTTGTTAATCTGAGCATTCCATGGGTTATTTTGGGTCATTCTGA 433 ||||||||| | ||||| || ||| || ||||||| ||||| || | ||||| ||||| Sbjct 234 GGTTAGTGCTGAGATGCTGGTCAATTTGGGCATTCCCTGGGTCATCCTTGGTCACTCTGA 293 Query 434 AAGAAGAGCCATTTTA--G-GTGAATCAAATGAGTTTGTTGGAGACAAGGTAGCATATGC 490 ||||| | | ||||| | |||||||||||| || || | | || || |||||||| Sbjct 294 GAGAAG-G-C-TTTTATTGAATGAATCAAATGACTTCGTGGCTGGTAAAGTTGCATATGC 350 Query 491 TCTTTCTCAAGGTTTGAAGGTAATTGCATGTGTTGGGGAGACTCTTGAGCAAAGAGAATC 550 ||||| ||||| | || || ||||| ||||||||||||||||||||||| ||||||| Sbjct 351 ACTTTCACAAGGCCTAAAAGTGATTGCTTGTGTTGGGGAGACTCTTGAGCAGCGAGAATC 410 Query 551 AGGATCCACCATGGCTGTTGTTGCAGCACAAACAAAGGCTATTGCAGACCGAGTAAAAGA 610 |||||| || |||| ||| |||||||| |||||||| || |||||||| | ||| | | | Sbjct 411 AGGATCTACAATGGTTGTAGTTGCAGCGCAAACAAAAGCAATTGCAGAACAAGTCACACA 470 Query 611 TTGGTCAAATGTGGTGATAGCTTATGAGCCTGTTTGGGCTATTGGTACTGGAAAGGTTGC 670 ||||| ||| | || | |||||||| || || ||||| ||||| || ||||||||||| Sbjct 471 CTGGTCCAATATTGTTTTGGCTTATGAACCAGTATGGGCCATTGGAACAGGAAAGGTTGC 530 Query 671 AACCCCTGCACAAGCCCAGGAAGTACATGCTGAATTGAGGAAATGGCTTCAAGCAAATGT 730 || || || ||||| || |||| ||| |||||| |||||||||||||| | ||||| Sbjct 531 TACTCCAGCTCAAGCTCAACAAGTTCATTTTGAATTAAGGAAATGGCTTCATGTGAATGT 590 Query 731 TAGCGCTGAAGTTGCTGCTTCAACCAGGATCATCTATGGAGGATCTGTAAGCGGTGCCAA 790 | | || ||||||||||||||||| || ||||||||||| || ||||||| || || || Sbjct 591 TGGTGCAGAAGTTGCTGCTTCAACTAGAATCATCTATGGTGGTTCTGTAAATGGAGCTAA 650 Query 791 CTGCAAGGAGTTGGCTGGACAGCCAGATGTTGACGGTTTTCTTGTAGGTGGAGCTTCGTT 850 |||||| |||||||| | ||| || ||||| || |||||| | || ||||| ||||| | Sbjct 651 CTGCAAAGAGTTGGCAGCACAACCTGATGTAGATGGTTTTTTGGTTGGTGGTGCTTCACT 710 Query 851 GAAGCCGGAGTTCATTGACATCATCAAG 878 |||||| || || ||||| ||||||||| Sbjct 711 GAAGCCTGAATTTATTGATATCATCAAG 738 >Solyc01g111120.4.1 Length=981 Score = 69.4 bits (37), Expect = 4e-11 Identities = 91/117 (78%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 585 AAGGCTATTGCAGA-CCGAGTA-AAAGATTGGTCAAATGTGGTGATAGCTTATGAGCCTG 642 |||||| ||||||| | | || ||| |||| ||||| || || || |||||||||| Sbjct 655 AAGGCTTTTGCAGATGCTA-TACCAAG-TTGGGATAATGTTGTCATTGCGTATGAGCCTG 712 Query 643 TTTGGGCTATTGGTACTGGAAAGGTTGCAACCCCTGCACAAGCCCAGGAAGTACATG 699 ||||||||||||| ||||| || ||||| | |||| || || ||||| ||||||| Sbjct 713 TTTGGGCTATTGGAACTGGTAAAGTTGCCTCGCCTGAGCAGGCTCAGGAGGTACATG 769 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31649383710 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5