##gff-version 3
##sequence-region C04SLe0018E07.1 1 67308
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	13124	15509	0.987	-	0	ID=SGN-E714349_alignment_1;Target=SGN-E714349 1 555 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	15288	15509	0.991	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E714349 1 222 +;Parent=SGN-E714349_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	13124	13456	0.985	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E714349 223 555 +;Parent=SGN-E714349_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	13341	15952	0.997	-	0	ID=SGN-E708896_alignment_1;Target=SGN-E708896 1 781 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	15288	15952	0.997	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E708896 1 665 +;Parent=SGN-E708896_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	13341	13456	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E708896 666 781 +;Parent=SGN-E708896_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	13349	15886	0.997	-	0	ID=SGN-E699057_alignment_1;Target=SGN-E699057 1 707 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	15288	15886	0.998	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E699057 1 599 +;Parent=SGN-E699057_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	13349	13456	0.991	-	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E699057 600 707 +;Parent=SGN-E699057_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	15372	15867	0.968	-	0	ID=SGN-E699159_alignment_1;Target=SGN-E699159 1 496 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	15372	15867	0.968	-	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E699159 1 496 +;Parent=SGN-E699159_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	15652	16394	0.995	-	0	ID=SGN-E704897_alignment_1;Target=SGN-E704897 1 743 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	15652	16394	0.995	-	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E704897 1 743 +;Parent=SGN-E704897_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	23909	24498	0.990	+	0	ID=SGN-E550684_alignment_1;Target=SGN-E550684 1 590 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	23909	24498	0.990	+	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E550684 1 590 +;Parent=SGN-E550684_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	23909	24498	0.990	+	0	ID=SGN-E688349_alignment_1;Target=SGN-E688349 1 590 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	23909	24498	0.990	+	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E688349 1 590 +;Parent=SGN-E688349_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	24122	24550	0.991	+	0	ID=SGN-E358519_alignment_1;Target=SGN-E358519 1 429 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	24122	24550	0.991	+	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E358519 1 429 +;Parent=SGN-E358519_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	24865	25458	0.944	+	0	ID=SGN-E372630_alignment_1;Target=SGN-E372630 1 395 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	24865	24948	0.988	+	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E372630 1 84 +;Parent=SGN-E372630_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E372630 85 142 +;Parent=SGN-E372630_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	25190	25458	0.922	+	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E372630 143 395 +;Parent=SGN-E372630_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	24866	25458	0.946	+	0	ID=SGN-E372631_alignment_1;Target=SGN-E372631 1 394 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	24866	24948	0.988	+	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E372631 1 83 +;Parent=SGN-E372631_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E372631 84 141 +;Parent=SGN-E372631_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	25190	25458	0.926	+	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E372631 142 394 +;Parent=SGN-E372631_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	24875	25458	0.945	+	0	ID=SGN-E289053_alignment_1;Target=SGN-E289053 1 385 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	24875	24948	0.986	+	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E289053 1 74 +;Parent=SGN-E289053_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E289053 75 132 +;Parent=SGN-E289053_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	25190	25458	0.926	+	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E289053 133 385 +;Parent=SGN-E289053_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	43319	51277	0.997	+	0	ID=SGN-E708856_alignment_1;Target=SGN-E708856 1 864 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	43319	43695	0.992	+	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E708856 1 377 +;Parent=SGN-E708856_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	50597	50688	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E708856 378 469 +;Parent=SGN-E708856_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	50883	51277	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E708856 470 864 +;Parent=SGN-E708856_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	51421	58936	0.963	+	0	ID=SGN-E421015_alignment_1;Target=SGN-E421015 1 644 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	51421	51583	0.945	+	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E421015 1 163 +;Parent=SGN-E421015_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	54260	54330	0.986	+	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E421015 164 234 +;Parent=SGN-E421015_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	55739	55828	0.978	+	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E421015 235 324 +;Parent=SGN-E421015_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	55954	56145	0.984	+	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E421015 325 516 +;Parent=SGN-E421015_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	56255	56353	0.919	+	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E421015 517 615 +;Parent=SGN-E421015_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58908	58936	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E421015 616 644 +;Parent=SGN-E421015_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	51421	51583	0.945	+	0	ID=SGN-E407189_alignment_1;Target=SGN-E407189 1 163 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	51421	51583	0.945	+	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E407189 1 163 +;Parent=SGN-E407189_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	56316	60580	0.939	+	0	ID=SGN-E461298_alignment_1;Target=SGN-E461298 1 722 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	56316	56353	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E461298 1 38 +;Parent=SGN-E461298_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58908	59046	0.950	+	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E461298 39 177 +;Parent=SGN-E461298_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60034	60580	0.936	+	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E461298 178 722 +;Parent=SGN-E461298_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	56603	60373	0.939	+	0	ID=SGN-E471057_alignment_1;Target=SGN-E471057 1 526 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	56603	56648	0.870	+	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E471057 1 47 +;Parent=SGN-E471057_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58908	59046	0.950	+	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E471057 48 186 +;Parent=SGN-E471057_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60034	60373	0.935	+	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E471057 187 526 +;Parent=SGN-E471057_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	56603	60220	0.972	+	0	ID=SGN-E469507_alignment_1;Target=SGN-E469507 1 373 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	56603	56648	0.870	+	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E469507 1 47 +;Parent=SGN-E469507_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58908	59046	0.950	+	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E469507 48 186 +;Parent=SGN-E469507_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60034	60220	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E469507 187 373 +;Parent=SGN-E469507_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	58013	58639	1.000	+	0	ID=SGN-E212227_alignment_1;Target=SGN-E212227 1 627 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58013	58639	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E212227 1 627 +;Parent=SGN-E212227_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	58908	60333	0.968	+	0	ID=SGN-E610618_alignment_1;Target=SGN-E610618 41 479 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58908	59046	0.950	+	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E610618 41 179 +;Parent=SGN-E610618_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60034	60333	0.977	+	0	ID=GTH_SGN_E_tom_potato_match_part_42;Target=SGN-E610618 180 479 +;Parent=SGN-E610618_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	58964	60352	1.000	+	0	ID=SGN-E214815_alignment_1;Target=SGN-E214815 1 402 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58964	59046	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_43;Target=SGN-E214815 1 83 +;Parent=SGN-E214815_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60034	60352	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_44;Target=SGN-E214815 84 402 +;Parent=SGN-E214815_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	58994	60205	1.000	+	0	ID=SGN-E277572_alignment_1;Target=SGN-E277572 1 225 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	58994	59046	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_45;Target=SGN-E277572 1 53 +;Parent=SGN-E277572_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60034	60205	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_46;Target=SGN-E277572 54 225 +;Parent=SGN-E277572_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	60092	60640	1.000	-	0	ID=SGN-E330545_alignment_1;Target=SGN-E330545 1 549 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60092	60640	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_47;Target=SGN-E330545 1 549 +;Parent=SGN-E330545_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match	60107	60687	0.923	+	0	ID=SGN-E596469_alignment_1;Target=SGN-E596469 1 584 -
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	match_part	60107	60687	0.923	+	0	ID=GTH_SGN_E_tom_potato_match_part_48;Target=SGN-E596469 1 584 -;Parent=SGN-E596469_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	gene	13124	16394	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	13124	16394	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	15288	16394	0.995	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	13124	13456	0.985	-	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	gene	23909	24550	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	23909	24550	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	23909	24550	0.990	+	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	gene	24865	25458	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	24865	25458	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	24865	24948	0.988	+	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	25190	25458	0.926	+	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	gene	43319	51277	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	43319	51277	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_4
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	43319	43695	0.992	+	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	50597	50688	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	50883	51277	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_9;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	gene	51421	60687	.	+	0	ID=GTH_SGN_E_tom_potato_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	51421	60687	.	+	0	ID=GTH_SGN_E_tom_potato_gene_5_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	51421	51583	0.945	+	0	ID=GTH_SGN_E_tom_potato_exon_10;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	54260	54330	0.986	+	0	ID=GTH_SGN_E_tom_potato_exon_11;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	55739	55828	0.978	+	0	ID=GTH_SGN_E_tom_potato_exon_12;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	55954	56145	0.984	+	0	ID=GTH_SGN_E_tom_potato_exon_13;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	56255	56353	0.919	+	0	ID=GTH_SGN_E_tom_potato_exon_14;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	58908	59046	0.950	+	0	ID=GTH_SGN_E_tom_potato_exon_15;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	60034	60687	0.923	+	0	ID=GTH_SGN_E_tom_potato_exon_16;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	56603	60687	.	+	0	ID=GTH_SGN_E_tom_potato_gene_5_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	56603	56648	0.870	+	0	ID=GTH_SGN_E_tom_potato_exon_17;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	58908	59046	0.950	+	0	ID=GTH_SGN_E_tom_potato_exon_18;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	60034	60687	0.923	+	0	ID=GTH_SGN_E_tom_potato_exon_19;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	58013	58639	.	+	0	ID=GTH_SGN_E_tom_potato_gene_5_AGS_3;Parent=GTH_SGN_E_tom_potato_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	58013	58639	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_20;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_3
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	gene	60092	60640	.	-	0	ID=GTH_SGN_E_tom_potato_gene_6
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	mRNA	60092	60640	.	-	0	ID=GTH_SGN_E_tom_potato_gene_6_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_6
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato_potato	exon	60092	60640	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_21;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	1	499	1652	-	0	ID=Gypsy00177_alignment_1;Target=Gypsy00177 1236 1736 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	500	645	904	+	0	ID=Copia00143_alignment_1;Target=Copia00143 77 221 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	698	857	1031	+	0	ID=Copia00143_alignment_2;Target=Copia00143 48 207 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	861	1237	1319	-	0	ID=Gypsy00177_alignment_2;Target=Gypsy00177 859 1237 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	2281	2369	298	+	0	ID=Gypsy00096_alignment_1;Target=Gypsy00096 5114 5205 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	2457	2681	445	+	0	ID=Copia00089_alignment_1;Target=Copia00089 3609 3830 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	5135	6236	7685	+	0	ID=Unknown00050_alignment_1;Target=Unknown00050 3905 4995 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	5316	6717	7321	+	0	ID=Gypsy00059_alignment_1;Target=Gypsy00059 1 1385 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	6469	8268	6409	-	0	ID=Gypsy00112_alignment_1;Target=Gypsy00112 4801 6598 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	10419	10592	412	+	0	ID=Gypsy00046_alignment_1;Target=Gypsy00046 3431 3710 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	10806	11313	1744	+	0	ID=Unknown00029_alignment_1;Target=Unknown00029 4787 5285 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	11467	11783	469	-	0	ID=Gypsy00077_alignment_1;Target=Gypsy00077 5487 5801 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	12293	12362	316	+	0	ID=Gypsy00188_alignment_1;Target=Gypsy00188 7652 7726 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	12334	12561	627	-	0	ID=HELITRON7_OS_alignment_1;Target=HELITRON7_OS 1477 1692 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	17078	17235	387	+	0	ID=SINE1_SO_alignment_1;Target=SINE1_SO 34 196 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	18925	19063	413	-	0	ID=Gypsy00046_alignment_2;Target=Gypsy00046 4074 4201 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	19011	19082	267	+	0	ID=ATENSPM10_alignment_1;Target=ATENSPM10 1119 1193 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	23226	24009	713	+	0	ID=HATORY_alignment_1;Target=HATORY 1183 1967 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	24680	24888	444	+	0	ID=ATHAT7_alignment_1;Target=ATHAT7 2535 3399 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	31268	32597	937	+	0	ID=Unknown00051_alignment_1;Target=Unknown00051 1983 3318 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	37698	38113	1085	+	0	ID=Copia00172_alignment_1;Target=Copia00172 1693 2080 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	38701	38766	355	-	0	ID=Unknown00013_alignment_1;Target=Unknown00013 3521 3587 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	39373	40649	6132	-	0	ID=Unknown00046_alignment_1;Target=Unknown00046 4442 6261 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	40651	41015	820	-	0	ID=Gypsy00073_alignment_1;Target=Gypsy00073 745 1312 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	41584	41975	1740	-	0	ID=Unknown00046_alignment_2;Target=Unknown00046 3884 4290 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	44133	44420	1417	-	0	ID=Unknown00046_alignment_3;Target=Unknown00046 2565 2841 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	44317	44433	377	+	0	ID=HATSOD1_alignment_1;Target=HATSOD1 4669 4781 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	52654	52904	710	-	0	ID=TS2_alignment_1;Target=TS2 391 651 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	52989	53200	679	-	0	ID=TS2_alignment_2;Target=TS2 153 375 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	53906	54129	466	+	0	ID=SONATA1_alignment_1;Target=SONATA1 13 243 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	54412	54559	548	+	0	ID=TS2_alignment_3;Target=TS2 265 408 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	54637	54838	833	+	0	ID=TS2_alignment_4;Target=TS2 461 655 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	56769	57106	1525	+	0	ID=Unknown00043_alignment_1;Target=Unknown00043 8088 11324 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	57057	58142	7226	-	0	ID=Unknown00058_alignment_1;Target=Unknown00058 1 1069 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	58203	58483	1322	+	0	ID=Unknown00043_alignment_2;Target=Unknown00043 11071 11324 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	62454	62552	423	-	0	ID=Gypsy00046_alignment_3;Target=Gypsy00046 4647 4747 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	62553	62569	332	+	0	ID=Copia00089_alignment_2;Target=Copia00089 522 637 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	62644	63049	712	+	0	ID=Gypsy00077_alignment_2;Target=Gypsy00077 5411 5805 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	63209	64110	2940	-	0	ID=Unknown00029_alignment_2;Target=Unknown00029 4400 5285 -
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	64731	64961	404	+	0	ID=Gypsy00077_alignment_3;Target=Gypsy00077 128 351 +
C04SLe0018E07.1	RepeatMasker	nucleotide_motif	65269	65761	471	-	0	ID=Unknown00029_alignment_3;Target=Unknown00029 3429 3912 -
C04SLe0018E07.1	Cross_match_vector	match	43223	43243	.	+	0	ID=pIndigoBAC-5_vector_match_1
C04SLe0018E07.1	BLAST_tomato_bacs	match	65922	67308	2476	+	0	ID=C04HBa0024G05.1_fwd_alignment_1;blast_gaps=0;Target=clone-C04HBa0024G05.1 614 2000 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22856	24947	2185	+	0	ID=C04HBa0031H05.1_fwd_alignment_1;blast_gaps=9;Target=clone-C04HBa0031H05.1 60438 62522 +;blast_percent_identity=88.93;blast_mismatches=219;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22857	24955	3620	+	0	ID=C06HBa0023B17.1_rev_alignment_1;blast_gaps=0;Target=clone-C06HBa0023B17.1 69641 71739 -;blast_percent_identity=97.24;blast_mismatches=58;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22853	24955	3747	+	0	ID=C08HBa0022O08.1_rev_alignment_1;blast_gaps=2;Target=clone-C08HBa0022O08.1 80135 82246 -;blast_percent_identity=97.87;blast_mismatches=36;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22991	24912	2985	+	0	ID=C08HBa0028C13.1_rev_alignment_1;blast_gaps=5;Target=clone-C08HBa0028C13.1 93250 95159 -;blast_percent_identity=94.91;blast_mismatches=82;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22858	24955	3392	+	0	ID=C08HBa0050P21.1_fwd_alignment_1;blast_gaps=6;Target=clone-C08HBa0050P21.1 79973 82068 +;blast_percent_identity=95.87;blast_mismatches=73;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22853	24955	3596	+	0	ID=C08HBa0058M16.1_rev_alignment_1;blast_gaps=3;Target=clone-C08HBa0058M16.1 54568 56669 -;blast_percent_identity=97.15;blast_mismatches=57;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22855	24042	1626	+	0	ID=C08HBa0175A13.1_fwd_alignment_1;blast_gaps=1;Target=clone-C08HBa0175A13.1 76141 77323 +;blast_percent_identity=92.51;blast_mismatches=84;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22853	24058	1968	+	0	ID=C09HBa0130D14.1_rev_alignment_1;blast_gaps=3;Target=clone-C09HBa0130D14.1 50906 52108 -;blast_percent_identity=96.27;blast_mismatches=42;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22991	24209	2107	+	0	ID=C09HBa0130D14.1_rev_alignment_2;blast_gaps=1;Target=clone-C09HBa0130D14.1 43005 44222 -;blast_percent_identity=96.88;blast_mismatches=37;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bacs	match	22859	24955	3709	+	0	ID=C12SLe0072J06.1_rev_alignment_1;blast_gaps=1;Target=clone-C12SLe0072J06.1 52938 55040 -;blast_percent_identity=97.72;blast_mismatches=42;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	6	661	1253	+	0	ID=C04SLe0018E07.1-SL_EcoRI0018E07_SP6_293874_1;blast_gaps=0;Target=SL_EcoRI0018E07_SP6_293874 1 656 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	3390	3995	1142	-	0	ID=C04SLe0018E07.1-SL_FOS0277B16_pIBR_612679_1;blast_gaps=0;Target=SL_FOS0277B16_pIBR_612679 3 608 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	7963	8547	1112	-	0	ID=C04SLe0018E07.1-SL_FOS0091O04_pIBF_512735_1;blast_gaps=0;Target=SL_FOS0091O04_pIBF_512735 2 586 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	8332	8946	1172	-	0	ID=C04SLe0018E07.1-SL_FOS0146H03_pIBR_476741_1;blast_gaps=0;Target=SL_FOS0146H03_pIBR_476741 3 617 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	10127	10831	1350	+	0	ID=C04SLe0018E07.1-SL_EcoRI0132O11_T7_336718_1;blast_gaps=0;Target=SL_EcoRI0132O11_T7_336718 1 705 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	12596	13235	1227	-	0	ID=C04SLe0018E07.1-LE_HBa0025C08_SP6_135651_1;blast_gaps=0;Target=LE_HBa0025C08_SP6_135651 1 640 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	12927	13340	779	+	0	ID=C04SLe0018E07.1-SL_MboI0007E09_T7_156798_1;blast_gaps=0;Target=SL_MboI0007E09_T7_156798 1 414 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	12985	13518	993	+	0	ID=C04SLe0018E07.1-SL_EcoRI0047A08_SP6_246608_1;blast_gaps=0;Target=SL_EcoRI0047A08_SP6_246608 12 545 +;is_problematic=0;blast_percent_identity=99.44;blast_mismatches=3;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	12985	13698	1342	+	0	ID=C04SLe0018E07.1-SL_EcoRI0128K11_SP6_333416_1;blast_gaps=0;Target=SL_EcoRI0128K11_SP6_333416 14 727 +;is_problematic=0;blast_percent_identity=99.44;blast_mismatches=4;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone	13309	30818	1527.5	.	0	is_problematic=1;ID=C04SLe0018E07.1-LE_HBa0085L21_1
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	13309	14106	1568	+	0	ID=C04SLe0018E07.1-LE_HBa0085L21_SP6_23224_1;blast_gaps=1;Target=LE_HBa0085L21_SP6_23224 1 799 +;Parent=C04SLe0018E07.1-LE_HBa0085L21_1;is_problematic=1;blast_percent_identity=99.87;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	30032	30818	1487	-	0	ID=C04SLe0018E07.1-LE_HBa0085L21_T7_23225_1;blast_gaps=0;Target=LE_HBa0085L21_T7_23225 1 787 +;Parent=C04SLe0018E07.1-LE_HBa0085L21_1;is_problematic=1;blast_percent_identity=99.49;blast_mismatches=4;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	13543	14272	1447	-	0	ID=C04SLe0018E07.1-SL_FOS0175M11_pIBR_534861_1;blast_gaps=0;Target=SL_FOS0175M11_pIBR_534861 16 745 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	14976	15473	987	-	0	ID=C04SLe0018E07.1-SL_MboI0068J17_T7_181777_1;blast_gaps=0;Target=SL_MboI0068J17_T7_181777 1 498 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	16615	16892	527	+	0	ID=C04SLe0018E07.1-LE_HBa0149F02_SP6_89714_1;blast_gaps=0;Target=LE_HBa0149F02_SP6_89714 1 278 +;is_problematic=0;blast_percent_identity=98.92;blast_mismatches=3;blast_evalue=2e-146
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	16975	17153	355	+	0	ID=C04SLe0018E07.1-LE_HBa0149F02_SP6_89714_2;blast_gaps=0;Target=LE_HBa0149F02_SP6_89714 361 539 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=2e-94
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	20142	20560	831	-	0	ID=C04SLe0018E07.1-LE_HBa0137N21_T7_122435_1;blast_gaps=0;Target=LE_HBa0137N21_T7_122435 269 687 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	20142	20560	823	-	0	ID=C04SLe0018E07.1-LE_HBa0123N10_SP6_58626_1;blast_gaps=0;Target=LE_HBa0123N10_SP6_58626 252 670 +;is_problematic=0;blast_percent_identity=99.76;blast_mismatches=1;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	23233	23867	1187	-	0	ID=C04SLe0018E07.1-SL_EcoRI0060M04_T7_299105_1;blast_gaps=0;Target=SL_EcoRI0060M04_T7_299105 1 635 +;is_problematic=0;blast_percent_identity=98.58;blast_mismatches=9;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	24036	24426	686	+	0	ID=C04SLe0018E07.1-SL_MboI0022I20_T7_149333_1;blast_gaps=0;Target=SL_MboI0022I20_T7_149333 1 391 +;is_problematic=0;blast_percent_identity=98.21;blast_mismatches=7;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	29045	29803	1505	+	0	ID=C04SLe0018E07.1-SL_EcoRI0074N12_T7_344315_1;blast_gaps=0;Target=SL_EcoRI0074N12_T7_344315 1 759 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	29085	29658	1138	-	0	ID=C04SLe0018E07.1-SL_MboI0114P11_SP6_206567_1;blast_gaps=0;Target=SL_MboI0114P11_SP6_206567 1 574 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	30756	31241	892	+	0	ID=C04SLe0018E07.1-LE_HBa0150N24_SP6_90910_1;blast_gaps=1;Target=LE_HBa0150N24_SP6_90910 1 487 +;is_problematic=0;blast_percent_identity=99.38;blast_mismatches=2;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	30864	31348	912	+	0	ID=C04SLe0018E07.1-LE_HBa0247H24_T7_407194_1;blast_gaps=0;Target=LE_HBa0247H24_T7_407194 1 485 +;is_problematic=0;blast_percent_identity=99.79;blast_mismatches=1;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	32259	32874	1150	+	0	ID=C04SLe0018E07.1-LE_HBa0021F09_SP6_79744_1;blast_gaps=0;Target=LE_HBa0021F09_SP6_79744 1 616 +;is_problematic=0;blast_percent_identity=99.51;blast_mismatches=3;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	33646	34204	1108	+	0	ID=C04SLe0018E07.1-LE_HBa0005E11_T7_1749_1;blast_gaps=0;Target=LE_HBa0005E11_T7_1749 1 559 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	34223	34359	272	+	0	ID=C04SLe0018E07.1-LE_HBa0005E11_T7_1749_2;blast_gaps=0;Target=LE_HBa0005E11_T7_1749 578 714 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=2e-69
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	36445	36631	371	-	0	ID=C04SLe0018E07.1-SL_EcoRI0121I09_T7_327941_1;blast_gaps=0;Target=SL_EcoRI0121I09_T7_327941 422 608 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=3e-99
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	36698	37052	615	-	0	ID=C04SLe0018E07.1-SL_EcoRI0121I09_T7_327941_2;blast_gaps=0;Target=SL_EcoRI0121I09_T7_327941 1 355 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=1e-172
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	45144	45921	1501	+	0	ID=C04SLe0018E07.1-SL_FOS0223J16_pIBF_571590_1;blast_gaps=0;Target=SL_FOS0223J16_pIBF_571590 1 778 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	46119	46636	1027	-	0	ID=C04SLe0018E07.1-SL_MboI0035N03_T7_220719_1;blast_gaps=0;Target=SL_MboI0035N03_T7_220719 131 648 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	49137	49800	1269	+	0	ID=C04SLe0018E07.1-SL_FOS0197D18_pIBR_551339_1;blast_gaps=0;Target=SL_FOS0197D18_pIBR_551339 3 666 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	49451	49800	632	+	0	ID=C04SLe0018E07.1-LE_HBa0097P24_SP6_30334_1;blast_gaps=1;Target=LE_HBa0097P24_SP6_30334 7 357 +;is_problematic=0;blast_percent_identity=98.86;blast_mismatches=3;blast_evalue=5e-178
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	49498	49800	569	+	0	ID=C04SLe0018E07.1-LE_HBa0097O24_SP6_30286_1;blast_gaps=0;Target=LE_HBa0097O24_SP6_30286 1 303 +;is_problematic=0;blast_percent_identity=98.68;blast_mismatches=4;blast_evalue=7e-159
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	49839	50313	819	+	0	ID=C04SLe0018E07.1-SL_MboI0091G16_T7_260809_1;blast_gaps=0;Target=SL_MboI0091G16_T7_260809 135 609 +;is_problematic=0;blast_percent_identity=99.16;blast_mismatches=4;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	49839	50069	410	+	0	ID=C04SLe0018E07.1-LE_HBa0097P24_SP6_30334_2;blast_gaps=0;Target=LE_HBa0097P24_SP6_30334 396 626 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=4e-111
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	49839	50427	1072	+	0	ID=C04SLe0018E07.1-SL_FOS0221J15_pIBF_570052_1;blast_gaps=0;Target=SL_FOS0221J15_pIBF_570052 34 622 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	50784	51301	985	+	0	ID=C04SLe0018E07.1-SL_FOS0106B11_pIBF_480229_1;blast_gaps=0;Target=SL_FOS0106B11_pIBF_480229 34 551 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	53452	54211	1449	+	0	ID=C04SLe0018E07.1-LE_HBa0211J17_SP6_372932_1;blast_gaps=0;Target=LE_HBa0211J17_SP6_372932 5 764 +;is_problematic=0;blast_percent_identity=99.74;blast_mismatches=2;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	59978	60635	1304	-	0	ID=C04SLe0018E07.1-SL_FOS0174P15_pIBF_534244_1;blast_gaps=0;Target=SL_FOS0174P15_pIBF_534244 1 658 +;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	60116	60667	1094	+	0	ID=C04SLe0018E07.1-SL_MboI0023P20_SP6_150368_1;blast_gaps=0;Target=SL_MboI0023P20_SP6_150368 1 552 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	63893	64501	1176	-	0	ID=C04SLe0018E07.1-SL_EcoRI0106E22_SP6_316254_1;blast_gaps=0;Target=SL_EcoRI0106E22_SP6_316254 1 609 +;is_problematic=0;blast_percent_identity=99.34;blast_mismatches=4;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_end	63930	64568	1227	-	0	ID=C04SLe0018E07.1-SL_EcoRI0013F05_SP6_291961_1;blast_gaps=1;Target=SL_EcoRI0013F05_SP6_291961 1 638 +;is_problematic=0;blast_percent_identity=99.37;blast_mismatches=3;blast_evalue=0.0
C04SLe0018E07.1	BLAST_tomato_bac_ends	clone_start	65310	65856	1053	+	0	ID=C04SLe0018E07.1-LE_HBa0024G05_T7_135070_1;blast_gaps=0;Target=LE_HBa0024G05_T7_135070 1 547 +;is_problematic=0;blast_percent_identity=99.27;blast_mismatches=4;blast_evalue=0.0
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	13124	15509	0.987	-	0	ID=SGN-E714349_alignment_2;Target=SGN-E714349 1 555 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	15288	15509	0.991	-	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E714349 1 222 +;Parent=SGN-E714349_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	13124	13456	0.985	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E714349 223 555 +;Parent=SGN-E714349_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	13341	15952	0.997	-	0	ID=SGN-E708896_alignment_2;Target=SGN-E708896 1 781 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	15288	15952	0.997	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E708896 1 665 +;Parent=SGN-E708896_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	13341	13456	1.000	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E708896 666 781 +;Parent=SGN-E708896_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	13349	15886	0.997	-	0	ID=SGN-E699057_alignment_2;Target=SGN-E699057 1 707 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	15288	15886	0.998	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E699057 1 599 +;Parent=SGN-E699057_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	13349	13456	0.991	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E699057 600 707 +;Parent=SGN-E699057_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	15372	15867	0.968	-	0	ID=SGN-E699159_alignment_2;Target=SGN-E699159 1 496 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	15372	15867	0.968	-	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E699159 1 496 +;Parent=SGN-E699159_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	15652	16394	0.995	-	0	ID=SGN-E704897_alignment_2;Target=SGN-E704897 1 743 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	15652	16394	0.995	-	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E704897 1 743 +;Parent=SGN-E704897_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	23909	24498	0.990	+	0	ID=SGN-E550684_alignment_2;Target=SGN-E550684 1 590 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	23909	24498	0.990	+	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E550684 1 590 +;Parent=SGN-E550684_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	23909	24498	0.990	+	0	ID=SGN-E688349_alignment_2;Target=SGN-E688349 1 590 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	23909	24498	0.990	+	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E688349 1 590 +;Parent=SGN-E688349_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	24122	24550	0.991	+	0	ID=SGN-E358519_alignment_2;Target=SGN-E358519 1 429 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	24122	24550	0.991	+	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E358519 1 429 +;Parent=SGN-E358519_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	24865	25458	0.944	+	0	ID=SGN-E372630_alignment_2;Target=SGN-E372630 1 395 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	24865	24948	0.988	+	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E372630 1 84 +;Parent=SGN-E372630_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E372630 85 142 +;Parent=SGN-E372630_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	25190	25458	0.922	+	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E372630 143 395 +;Parent=SGN-E372630_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	24866	25458	0.946	+	0	ID=SGN-E372631_alignment_2;Target=SGN-E372631 1 394 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	24866	24948	0.988	+	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E372631 1 83 +;Parent=SGN-E372631_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E372631 84 141 +;Parent=SGN-E372631_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	25190	25458	0.926	+	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E372631 142 394 +;Parent=SGN-E372631_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	24875	25458	0.945	+	0	ID=SGN-E289053_alignment_2;Target=SGN-E289053 1 385 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	24875	24948	0.986	+	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E289053 1 74 +;Parent=SGN-E289053_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E289053 75 132 +;Parent=SGN-E289053_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	25190	25458	0.926	+	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E289053 133 385 +;Parent=SGN-E289053_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	43319	51277	0.997	+	0	ID=SGN-E708856_alignment_2;Target=SGN-E708856 1 864 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	43319	43695	0.992	+	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E708856 1 377 +;Parent=SGN-E708856_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	50597	50688	1.000	+	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E708856 378 469 +;Parent=SGN-E708856_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	50883	51277	1.000	+	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E708856 470 864 +;Parent=SGN-E708856_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	58013	58639	1.000	+	0	ID=SGN-E212227_alignment_2;Target=SGN-E212227 1 627 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	58013	58639	1.000	+	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E212227 1 627 +;Parent=SGN-E212227_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	58964	60352	1.000	+	0	ID=SGN-E214815_alignment_2;Target=SGN-E214815 1 402 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	58964	59046	1.000	+	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E214815 1 83 +;Parent=SGN-E214815_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	60034	60352	1.000	+	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E214815 84 402 +;Parent=SGN-E214815_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	58994	60205	1.000	+	0	ID=SGN-E277572_alignment_2;Target=SGN-E277572 1 225 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	58994	59046	1.000	+	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E277572 1 53 +;Parent=SGN-E277572_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	60034	60205	1.000	+	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E277572 54 225 +;Parent=SGN-E277572_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match	60092	60640	1.000	-	0	ID=SGN-E330545_alignment_2;Target=SGN-E330545 1 549 +
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	match_part	60092	60640	1.000	-	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E330545 1 549 +;Parent=SGN-E330545_alignment_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	gene	13124	16394	.	-	0	ID=GTH_SGN_E_tom_gene_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	mRNA	13124	16394	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	15288	16394	0.995	-	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	13124	13456	0.985	-	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	gene	23909	24550	.	+	0	ID=GTH_SGN_E_tom_gene_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	mRNA	23909	24550	.	+	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	23909	24550	0.990	+	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	gene	24865	25458	.	+	0	ID=GTH_SGN_E_tom_gene_3
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	mRNA	24865	25458	.	+	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	24865	24948	0.988	+	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	25041	25098	0.983	+	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	25190	25458	0.926	+	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	gene	43319	51277	.	+	0	ID=GTH_SGN_E_tom_gene_4
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	mRNA	43319	51277	.	+	0	ID=GTH_SGN_E_tom_gene_4_AGS_1;Parent=GTH_SGN_E_tom_gene_4
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	43319	43695	0.992	+	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	50597	50688	1.000	+	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	50883	51277	1.000	+	0	ID=GTH_SGN_E_tom_exon_9;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	gene	58013	58639	.	+	0	ID=GTH_SGN_E_tom_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	mRNA	58013	58639	.	+	0	ID=GTH_SGN_E_tom_gene_5_AGS_1;Parent=GTH_SGN_E_tom_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	58013	58639	1.000	+	0	ID=GTH_SGN_E_tom_exon_10;Parent=GTH_SGN_E_tom_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	gene	58964	60352	.	+	0	ID=GTH_SGN_E_tom_gene_6
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	mRNA	58964	60352	.	+	0	ID=GTH_SGN_E_tom_gene_6_AGS_1;Parent=GTH_SGN_E_tom_gene_6
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	58964	59046	1.000	+	0	ID=GTH_SGN_E_tom_exon_11;Parent=GTH_SGN_E_tom_gene_6_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	60034	60352	1.000	+	0	ID=GTH_SGN_E_tom_exon_12;Parent=GTH_SGN_E_tom_gene_6_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	gene	60092	60640	.	-	0	ID=GTH_SGN_E_tom_gene_7
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	mRNA	60092	60640	.	-	0	ID=GTH_SGN_E_tom_gene_7_AGS_1;Parent=GTH_SGN_E_tom_gene_7
C04SLe0018E07.1	GenomeThreader_SGN_E_tomato	exon	60092	60640	1.000	-	0	ID=GTH_SGN_E_tom_exon_13;Parent=GTH_SGN_E_tom_gene_7_AGS_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	gene	13454	22586	1	-	.	ID=g1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	transcript	13454	22586	.	-	.	ID=g1.t1_1;Parent=g1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	stop_codon	13454	13456	.	-	0	Parent=g1.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	13454	13456	.	-	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	15288	16887	.	-	1	ID=g1.t1.cds_2;Parent=g1.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	19893	19951	.	-	0	ID=g1.t1.cds_3;Parent=g1.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	22443	22586	.	-	0	ID=g1.t1.cds_4;Parent=g1.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	start_codon	22584	22586	.	-	0	Parent=g1.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	gene	43324	60212	1	+	.	ID=g2_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	transcript	43324	60212	.	+	.	ID=g2.t1_1;Parent=g2_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	start_codon	43324	43326	.	+	0	Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	43324	43695	.	+	0	ID=g2.t1.cds_1;Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	50597	50688	.	+	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	50883	51462	.	+	1	ID=g2.t1.cds_3;Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	55739	55828	.	+	0	ID=g2.t1.cds_4;Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	55954	56145	.	+	0	ID=g2.t1.cds_5;Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	58908	59046	.	+	0	ID=g2.t1.cds_6;Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	CDS	60034	60212	.	+	2	ID=g2.t1.cds_7;Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_tom_cdna	stop_codon	60210	60212	.	+	0	Parent=g2.t1_1
C04SLe0018E07.1	AUGUSTUS_ab_initio	gene	13252	22586	1	-	.	ID=g1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	transcript	13252	22586	.	-	.	ID=g1.t1_2;Parent=g1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	stop_codon	13252	13254	.	-	0	Parent=g1.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	13252	13467	.	-	0	ID=g1.t1.cds_5;Parent=g1.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	13857	13880	.	-	0	ID=g1.t1.cds_6;Parent=g1.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	15288	16887	.	-	1	ID=g1.t1.cds_7;Parent=g1.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	19893	19951	.	-	0	ID=g1.t1.cds_8;Parent=g1.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	22443	22586	.	-	0	ID=g1.t1.cds_9;Parent=g1.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	start_codon	22584	22586	.	-	0	Parent=g1.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	gene	55730	60212	1	+	.	ID=g2_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	transcript	55730	60212	.	+	.	ID=g2.t1_2;Parent=g2_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	start_codon	55730	55732	.	+	0	Parent=g2.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	55730	55828	.	+	0	ID=g2.t1.cds_8;Parent=g2.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	55954	56137	.	+	0	ID=g2.t1.cds_9;Parent=g2.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	CDS	60034	60212	.	+	2	ID=g2.t1.cds_10;Parent=g2.t1_2
C04SLe0018E07.1	AUGUSTUS_ab_initio	stop_codon	60210	60212	.	+	0	Parent=g2.t1_2
C04SLe0018E07.1	AUGUSTUS_tom_ugs	gene	13252	22586	1	-	.	ID=g1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	transcript	13252	22586	.	-	.	ID=g1.t1_3;Parent=g1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	stop_codon	13252	13254	.	-	0	Parent=g1.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	13252	13467	.	-	0	ID=g1.t1.cds_10;Parent=g1.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	13857	13880	.	-	0	ID=g1.t1.cds_11;Parent=g1.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	15288	16887	.	-	1	ID=g1.t1.cds_12;Parent=g1.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	19893	19951	.	-	0	ID=g1.t1.cds_13;Parent=g1.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	22443	22586	.	-	0	ID=g1.t1.cds_14;Parent=g1.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	start_codon	22584	22586	.	-	0	Parent=g1.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	gene	43324	60212	1	+	.	ID=g2_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	transcript	43324	60212	.	+	.	ID=g2.t1_3;Parent=g2_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	start_codon	43324	43326	.	+	0	Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	43324	43695	.	+	0	ID=g2.t1.cds_11;Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	50597	50688	.	+	0	ID=g2.t1.cds_12;Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	50883	51462	.	+	1	ID=g2.t1.cds_13;Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	55739	55828	.	+	0	ID=g2.t1.cds_14;Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	55954	56145	.	+	0	ID=g2.t1.cds_15;Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	58908	59046	.	+	0	ID=g2.t1.cds_16;Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	CDS	60034	60212	.	+	2	ID=g2.t1.cds_17;Parent=g2.t1_3
C04SLe0018E07.1	AUGUSTUS_tom_ugs	stop_codon	60210	60212	.	+	0	Parent=g2.t1_3
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match	13124	16394	0.997	-	0	ID=SGN-U325038_alignment_1;Target=SGN-U325038 1 1440 +
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	15288	16394	1.000	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U325038 1 1107 +;Parent=SGN-U325038_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	13124	13456	0.985	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U325038 1108 1440 +;Parent=SGN-U325038_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match	23909	24550	0.991	+	0	ID=SGN-U327646_alignment_1;Target=SGN-U327646 1 642 +
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	23909	24550	0.991	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U327646 1 642 +;Parent=SGN-U327646_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match	24865	25458	0.946	+	0	ID=SGN-U328477_alignment_1;Target=SGN-U328477 1 395 +
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	24865	24948	0.988	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U328477 1 84 +;Parent=SGN-U328477_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	25041	25098	0.983	+	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U328477 85 142 +;Parent=SGN-U328477_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	25190	25458	0.926	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U328477 143 395 +;Parent=SGN-U328477_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match	43325	51277	0.999	+	0	ID=SGN-U331405_alignment_1;Target=SGN-U331405 1 858 +
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	43325	43695	1.000	+	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U331405 1 371 +;Parent=SGN-U331405_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	50597	50688	1.000	+	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U331405 372 463 +;Parent=SGN-U331405_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	50883	51277	0.997	+	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U331405 464 858 +;Parent=SGN-U331405_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match	58013	58639	1.000	+	0	ID=SGN-U340340_alignment_1;Target=SGN-U340340 1 627 +
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	58013	58639	1.000	+	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U340340 1 627 +;Parent=SGN-U340340_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match	58964	60695	0.995	+	0	ID=SGN-U325949_alignment_1;Target=SGN-U325949 1 745 -
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	58964	59046	1.000	+	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U325949 1 83 -;Parent=SGN-U325949_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	match_part	60034	60695	0.994	+	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U325949 84 745 -;Parent=SGN-U325949_alignment_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	gene	13124	16394	.	-	0	ID=GTH_SGN_U_tom_gene_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	mRNA	13124	16394	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	15288	16394	1.000	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	13124	13456	0.985	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	gene	23909	24550	.	+	0	ID=GTH_SGN_U_tom_gene_2
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	mRNA	23909	24550	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	23909	24550	0.991	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	gene	24865	25458	.	+	0	ID=GTH_SGN_U_tom_gene_3
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	mRNA	24865	25458	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	24865	24948	0.988	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	25041	25098	0.983	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	25190	25458	0.926	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	gene	43325	51277	.	+	0	ID=GTH_SGN_U_tom_gene_4
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	mRNA	43325	51277	.	+	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	43325	43695	1.000	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	50597	50688	1.000	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	50883	51277	0.997	+	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	gene	58013	58639	.	+	0	ID=GTH_SGN_U_tom_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	mRNA	58013	58639	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	58013	58639	1.000	+	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	gene	58964	60695	.	+	0	ID=GTH_SGN_U_tom_gene_6
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	mRNA	58964	60695	.	+	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	58964	59046	1.000	+	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C04SLe0018E07.1	GenomeThreader_SGN_U_tomato	exon	60034	60695	0.994	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	gene	13454	22586	1	-	.	ID=g1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	transcript	13454	22586	.	-	.	ID=g1.t1_4;Parent=g1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	stop_codon	13454	13456	.	-	0	Parent=g1.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	13454	13456	.	-	0	ID=g1.t1.cds_15;Parent=g1.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	15288	16887	.	-	1	ID=g1.t1.cds_16;Parent=g1.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	19893	19951	.	-	0	ID=g1.t1.cds_17;Parent=g1.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	22443	22586	.	-	0	ID=g1.t1.cds_18;Parent=g1.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	start_codon	22584	22586	.	-	0	Parent=g1.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	gene	43324	60212	1	+	.	ID=g2_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	transcript	43324	60212	.	+	.	ID=g2.t1_4;Parent=g2_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	start_codon	43324	43326	.	+	0	Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	43324	43695	.	+	0	ID=g2.t1.cds_18;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	50597	50688	.	+	0	ID=g2.t1.cds_19;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	50883	51583	.	+	1	ID=g2.t1.cds_20;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	54260	54330	.	+	2	ID=g2.t1.cds_21;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	55739	55828	.	+	0	ID=g2.t1.cds_22;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	55954	56145	.	+	0	ID=g2.t1.cds_23;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	56255	56353	.	+	0	ID=g2.t1.cds_24;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	58908	59046	.	+	0	ID=g2.t1.cds_25;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	CDS	60034	60212	.	+	2	ID=g2.t1.cds_26;Parent=g2.t1_4
C04SLe0018E07.1	AUGUSTUS_tom_pot_cdna	stop_codon	60210	60212	.	+	0	Parent=g2.t1_4
C04SLe0018E07.1	BLAST_ath_pep	match	48846	49205	106	-	0	ID=AT2G31610.1_fwd_alignment_1;blast_gaps=4;Target=AT2G31610.1 2 139 +;blast_percent_identity=50.00;blast_mismatches=51;blast_evalue=2e-21
C04SLe0018E07.1	BLAST_ath_pep	match	48846	49202	104	-	0	ID=AT3G53870.1_fwd_alignment_1;blast_gaps=4;Target=AT3G53870.1 3 139 +;blast_percent_identity=49.64;blast_mismatches=51;blast_evalue=6e-21
C04SLe0018E07.1	BLAST_ath_pep	match	43324	43692	149	+	0	ID=AT5G16520.1_fwd_alignment_1;blast_gaps=1;Target=AT5G16520.1 1 121 +;blast_percent_identity=55.28;blast_mismatches=55;blast_evalue=2e-34
C04SLe0018E07.1	BLAST_ath_pep	match	50875	51582	319	+	0	ID=AT5G16520.1_fwd_alignment_2;blast_gaps=0;Target=AT5G16520.1 151 386 +;blast_percent_identity=62.71;blast_mismatches=88;blast_evalue=2e-85
C04SLe0018E07.1	BLAST_ath_pep	match	48846	49205	105	-	0	ID=AT5G35530.1_fwd_alignment_1;blast_gaps=4;Target=AT5G35530.1 2 139 +;blast_percent_identity=49.64;blast_mismatches=51;blast_evalue=3e-21