psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 828 29 0 0 2 217 4 827 + SGN-E747222 1233 0 1074 C04HBa0008H22.1 81572 73881 75565 5 5,772,47,18,15, 0,5,777,1035,1059, 73881,74004,75352,75525,75550, 771 27 0 0 1 5 1 2 + SGN-E747221 1292 7 810 C04HBa0008H22.1 81572 73977 74777 2 8,790, 7,20, 73977,73987, 2085 0 0 0 0 0 11 4689 + SGN-E746431 2103 1 2086 C04HBa0008H22.1 81572 59827 66601 12 132,259,121,186,164,108,138,105,286,124,289,173, 1,133,392,513,699,863,971,1109,1214,1500,1624,1913, 59827,59960,61630,62404,62816,63766,64124,64340,64679,65056,66138,66428, 1974 0 0 0 0 0 1 947 - SGN-E745605 1992 1 1975 C04HBa0008H22.1 81572 42210 45131 2 1611,363, 17,1628, 42210,44768, 1195 1 0 0 0 0 9 3391 - SGN-E745182 1209 1 1197 C04HBa0008H22.1 81572 46452 51039 10 323,72,96,123,58,56,78,105,112,173, 12,335,407,503,626,684,740,818,923,1035, 46452,47231,47470,47708,48912,49350,49768,49957,50168,50866, 475 32 0 0 1 5 1 2 + SGN-E207139 512 0 512 C04HBa0008H22.1 81572 73978 74487 2 7,500, 0,12, 73978,73987, 545 1 0 0 1 10 0 0 + SGN-E210474 565 9 565 C04HBa0008H22.1 81572 246 792 2 7,539, 9,26, 246,253, 394 1 0 1 1 10 2 2 + SGN-E211561 774 368 774 C04HBa0008H22.1 81572 246 644 4 7,360,20,9, 368,385,745,765, 246,253,614,635, 431 9 0 0 0 0 3 1262 + SGN-E202356 440 0 440 C04HBa0008H22.1 81572 62467 64169 4 123,164,108,45, 0,123,287,395, 62467,62816,63766,64124, 673 1 0 0 0 0 1 1 + SGN-E578315 674 0 674 C04HBa0008H22.1 81572 73989 74664 2 130,544, 0,130, 73989,74120, 75 0 0 0 0 0 0 0 - SGN-E578390 730 497 572 C04HBa0008H22.1 81572 9205 9280 1 75, 158, 9205, 359 16 0 0 2 217 3 709 + SGN-E556291 827 0 592 C04HBa0008H22.1 81572 74481 75565 4 295,47,18,15, 0,295,553,577, 74481,75352,75525,75550, 700 0 0 0 0 0 7 2627 - SGN-E321870 700 0 700 C04HBa0008H22.1 81572 47709 51036 8 32,89,58,56,78,105,112,170, 0,32,121,179,235,313,418,530, 47709,47742,48912,49350,49768,49957,50168,50866, 502 5 0 0 0 0 0 0 - SGN-E308771 507 0 507 C04HBa0008H22.1 81572 42907 43414 1 507, 0, 42907, 688 2 0 0 1 10 1 1 + SGN-E379710 709 9 709 C04HBa0008H22.1 81572 246 937 3 7,633,50, 9,26,659, 246,253,887, 708 3 0 0 0 0 2 796 + SGN-E380056 711 0 711 C04HBa0008H22.1 81572 1726 3233 3 39,198,474, 0,39,237, 1726,2383,2759, 700 1 0 0 0 0 1 576 + SGN-E370930 716 0 701 C04HBa0008H22.1 81572 74489 75766 2 287,414, 0,287, 74489,75352, 547 2 0 0 0 0 1 576 + SGN-E370931 549 0 549 C04HBa0008H22.1 81572 74298 75423 2 478,71, 0,478, 74298,75352, 56 0 0 0 1 3 2 191 + SGN-E390715 645 586 645 C04HBa0008H22.1 81572 2520 2767 3 8,40,8, 586,597,637, 2520,2541,2759, 559 8 0 0 1 1 0 0 + SGN-E391278 598 0 568 C04HBa0008H22.1 81572 2770 3337 2 563,4, 0,564, 2770,3333, 685 1 0 0 0 0 1 178 + SGN-E395671 695 0 686 C04HBa0008H22.1 81572 2430 3294 2 151,535, 0,151, 2430,2759, 46 1 0 0 1 26 1 25 + SGN-E396194 715 529 602 C04HBa0008H22.1 81572 38263 38335 2 14,33, 529,569, 38263,38302, 342 17 0 0 2 10 1 8 + SGN-E396332 405 6 375 C04HBa0008H22.1 81572 2970 3337 3 40,315,4, 6,55,371, 2970,3018,3333, 611 1 0 0 1 10 0 0 + SGN-E398488 635 10 632 C04HBa0008H22.1 81572 246 858 2 7,605, 10,27, 246,253, 611 6 0 0 0 0 4 1416 - SGN-E541260 659 0 617 C04HBa0008H22.1 81572 22401 24434 5 258,67,101,59,132, 42,300,367,468,527, 22401,22745,23418,24168,24302, 496 0 0 0 0 0 4 1416 - SGN-E541261 504 0 496 C04HBa0008H22.1 81572 22411 24323 5 248,67,101,59,21, 8,256,323,424,483, 22411,22745,23418,24168,24302, 753 1 0 1 1 5 5 2434 - SGN-E541262 764 4 764 C04HBa0008H22.1 81572 24425 27614 6 11,66,51,112,453,62, 0,16,82,133,245,698, 24425,24513,24796,25364,25913,27552, 502 1 0 0 0 0 5 1628 - SGN-E541264 503 0 503 C04HBa0008H22.1 81572 22192 24323 6 7,248,67,101,59,21, 0,7,255,322,423,482, 22192,22411,22745,23418,24168,24302, 42 3 0 0 0 0 0 0 + SGN-E541907 809 753 798 C04HBa0008H22.1 81572 78869 78914 1 45, 753, 78869, 751 2 0 0 0 0 0 0 - SGN-E545395 772 0 753 C04HBa0008H22.1 81572 39839 40592 1 753, 19, 39839, 686 1 0 0 0 0 0 0 - SGN-E545396 687 0 687 C04HBa0008H22.1 81572 42728 43415 1 687, 0, 42728, 36 2 0 0 0 0 1 22 - SGN-E546478 680 576 614 C04HBa0008H22.1 81572 12214 12274 2 9,29, 66,75, 12214,12245, 648 1 0 0 0 0 0 0 - SGN-E548466 649 0 649 C04HBa0008H22.1 81572 13339 13988 1 649, 0, 13339, 462 0 0 0 0 0 2 796 + SGN-E241255 462 0 462 C04HBa0008H22.1 81572 1671 2929 3 94,198,170, 0,94,292, 1671,2383,2759, 416 13 0 0 1 3 3 798 + SGN-E242073 432 0 432 C04HBa0008H22.1 81572 1676 2903 4 19,68,198,144, 0,22,90,288, 1676,1697,2383,2759, 589 0 0 0 0 0 2 796 + SGN-E241932 589 0 589 C04HBa0008H22.1 81572 1671 3056 3 94,198,297, 0,94,292, 1671,2383,2759, 374 0 0 0 0 0 2 1049 + SGN-E231103 374 0 374 C04HBa0008H22.1 81572 64875 66298 3 90,124,160, 0,90,214, 64875,65056,66138, 711 0 0 1 1 1 6 2477 - SGN-E728430 713 0 713 C04HBa0008H22.1 81572 24569 27758 8 10,34,4,12,112,453,62,25, 0,10,44,49,61,173,626,688, 24569,24796,24831,24835,25364,25913,27552,27733, 853 0 0 0 1 1 1 947 - SGN-E737978 872 18 872 C04HBa0008H22.1 81572 43356 45156 3 5,460,388, 0,6,466, 43356,43361,44768, 705 0 0 0 0 0 1 947 - SGN-E740016 709 4 709 C04HBa0008H22.1 81572 43513 45165 2 308,397, 0,308, 43513,44768, 894 0 0 0 0 0 3 882 + SGN-E701886 894 0 894 C04HBa0008H22.1 81572 1148 2924 4 427,104,198,165, 0,427,531,729, 1148,1661,2383,2759, 866 0 0 0 0 0 4 883 + SGN-E701898 866 0 866 C04HBa0008H22.1 81572 1148 2897 5 427,104,198,106,31, 0,427,531,729,835, 1148,1661,2383,2759,2866, 905 0 0 1 0 0 7 2866 - SGN-E702681 906 0 906 C04HBa0008H22.1 81572 24365 28137 8 66,3,73,51,112,453,62,86, 0,66,69,142,193,305,758,820, 24365,24432,24506,24796,25364,25913,27552,28051, 883 0 0 1 0 0 5 1574 + SGN-E705489 884 0 884 C04HBa0008H22.1 81572 62453 64911 6 137,164,108,138,105,232, 0,137,301,409,547,652, 62453,62816,63766,64124,64340,64679, 791 17 0 0 1 1 4 2290 + SGN-E705623 809 0 809 C04HBa0008H22.1 81572 59854 62952 6 365,122,3,182,100,36, 0,365,487,490,672,773, 59854,61630,61796,62408,62816,62916, 811 0 0 0 1 1 5 1318 - SGN-E707594 821 9 821 C04HBa0008H22.1 81572 24180 26309 7 23,24,133,72,51,112,396, 0,24,48,181,253,304,416, 24180,24203,24302,24507,24796,25364,25913, 800 0 0 0 0 0 1 254 - SGN-E709129 815 15 815 C04HBa0008H22.1 81572 40326 41380 2 516,284, 0,516, 40326,41096, 465 2 0 0 0 0 3 1262 + SGN-E244257 468 1 468 C04HBa0008H22.1 81572 62402 64131 4 188,164,108,7, 1,189,353,461, 62402,62816,63766,64124, 566 0 0 0 0 0 0 0 + SGN-E245998 566 0 566 C04HBa0008H22.1 81572 73976 74542 1 566, 0, 73976, 71 2 0 0 0 0 0 0 + SGN-E248579 316 243 316 C04HBa0008H22.1 81572 257 330 1 73, 243, 257, 532 0 0 0 0 0 6 2626 - SGN-E252020 532 0 532 C04HBa0008H22.1 81572 47778 50936 7 53,58,56,78,105,112,70, 0,53,111,167,245,350,462, 47778,48912,49350,49768,49957,50168,50866, 586 22 0 0 0 0 0 0 + SGN-E254378 608 0 608 C04HBa0008H22.1 81572 73987 74595 1 608, 0, 73987, 438 0 0 0 0 0 4 1243 - SGN-E255858 438 0 438 C04HBa0008H22.1 81572 24318 25999 5 117,72,51,112,86, 0,117,189,240,352, 24318,24507,24796,25364,25913, 609 0 0 0 0 0 6 2626 - SGN-E258148 609 0 609 C04HBa0008H22.1 81572 47800 51035 7 31,58,56,78,105,112,169, 0,31,89,145,223,328,440, 47800,48912,49350,49768,49957,50168,50866, 642 0 0 1 0 0 3 705 + SGN-E258286 643 0 643 C04HBa0008H22.1 81572 1213 2561 4 362,104,137,40, 0,362,466,603, 1213,1661,2383,2521, 699 0 0 1 0 0 6 2626 - SGN-E263288 700 0 700 C04HBa0008H22.1 81572 47709 51035 7 122,58,56,78,105,112,169, 0,122,180,236,314,419,531, 47709,48912,49350,49768,49957,50168,50866, 369 0 0 0 0 0 0 0 + SGN-E271270 369 0 369 C04HBa0008H22.1 81572 74298 74667 1 369, 0, 74298, 470 0 0 0 0 0 4 1165 - SGN-E275085 470 0 470 C04HBa0008H22.1 81572 49354 50989 5 52,78,105,112,123, 0,52,130,235,347, 49354,49768,49957,50168,50866, 464 13 0 0 0 0 0 0 + SGN-E278678 478 0 477 C04HBa0008H22.1 81572 73997 74474 1 477, 0, 73997, 505 2 0 0 0 0 2 1049 + SGN-E284522 516 0 507 C04HBa0008H22.1 81572 64903 66459 3 62,124,321, 0,62,186, 64903,65056,66138, 470 1 0 0 0 0 0 0 - SGN-E293004 471 0 471 C04HBa0008H22.1 81572 13516 13987 1 471, 0, 13516, 494 1 0 0 0 0 4 1416 - SGN-E296180 503 0 495 C04HBa0008H22.1 81572 22411 24322 5 248,67,101,59,20, 8,256,323,424,483, 22411,22745,23418,24168,24302, 539 0 0 0 0 0 2 1623 - SGN-E296279 542 3 542 C04HBa0008H22.1 81572 25452 27614 3 24,453,62, 0,24,477, 25452,25913,27552, 578 0 0 0 0 0 5 1545 - SGN-E296592 607 0 578 C04HBa0008H22.1 81572 48912 51035 6 58,56,78,105,112,169, 29,87,143,221,326,438, 48912,49350,49768,49957,50168,50866, 579 0 0 0 2 2 0 0 + SGN-E300219 585 4 585 C04HBa0008H22.1 81572 73998 74577 3 51,179,349, 4,56,236, 73998,74049,74228, 656 0 0 0 0 0 1 748 - SGN-E305537 656 0 656 C04HBa0008H22.1 81572 41098 42502 2 280,376, 0,280, 41098,42126, 475 0 0 0 0 0 1 1186 - SGN-E329595 498 23 498 C04HBa0008H22.1 81572 25955 27616 2 411,64, 0,411, 25955,27552, 332 1 0 0 0 0 2 1012 + SGN-E325152 333 0 333 C04HBa0008H22.1 81572 62526 63871 3 64,164,105, 0,64,228, 62526,62816,63766, 658 0 0 1 0 0 6 2626 - SGN-E328413 659 0 659 C04HBa0008H22.1 81572 47736 51021 7 95,58,56,78,105,112,155, 0,95,153,209,287,392,504, 47736,48912,49350,49768,49957,50168,50866, 668 0 0 1 0 0 7 2627 - SGN-E315176 669 0 669 C04HBa0008H22.1 81572 47731 51027 8 7,92,58,56,78,105,112,161, 0,7,99,157,213,291,396,508, 47731,47739,48912,49350,49768,49957,50168,50866, 688 1 0 1 0 0 1 254 - SGN-E315856 690 0 690 C04HBa0008H22.1 81572 40408 41352 2 434,256, 0,434, 40408,41096, 472 4 0 0 0 0 0 0 - SGN-E335080 476 0 476 C04HBa0008H22.1 81572 42940 43416 1 476, 0, 42940, 516 1 0 0 0 0 1 1186 - SGN-E334734 539 19 536 C04HBa0008H22.1 81572 25913 27616 2 453,64, 3,456, 25913,27552, 631 23 0 1 1 1 0 0 + SGN-E346202 663 7 663 C04HBa0008H22.1 81572 73987 74642 2 503,152, 7,511, 73987,74490, 700 0 0 1 1 1 2 4376 - SGN-E348943 702 0 702 C04HBa0008H22.1 81572 15834 20911 4 95,246,282,78, 0,96,342,624, 15834,15929,17951,20833, 583 1 0 0 0 0 2 179 + SGN-E354490 584 0 584 C04HBa0008H22.1 81572 2460 3223 3 121,447,16, 0,121,568, 2460,2759,3207, 486 0 0 0 0 0 2 1049 + SGN-E356885 495 0 486 C04HBa0008H22.1 81572 64924 66459 3 41,124,321, 0,41,165, 64924,65056,66138, 393 2 0 0 0 0 2 325 + SGN-E365772 395 0 395 C04HBa0008H22.1 81572 64402 65122 3 43,286,66, 0,43,329, 64402,64679,65056, 39 0 0 0 1 5 1 9 + SGN-E365093 607 104 148 C04HBa0008H22.1 81572 31025 31073 2 12,27, 104,121, 31025,31046, 39 0 0 0 1 5 1 9 + SGN-E363671 494 113 157 C04HBa0008H22.1 81572 31025 31073 2 12,27, 113,130, 31025,31046, 39 0 0 0 1 5 1 9 + SGN-E360312 623 104 148 C04HBa0008H22.1 81572 31025 31073 2 12,27, 104,121, 31025,31046, 39 0 0 0 1 5 1 9 + SGN-E360413 425 109 153 C04HBa0008H22.1 81572 31025 31073 2 12,27, 109,126, 31025,31046, 721 8 0 0 0 0 6 2227 - SGN-E694020 767 26 755 C04HBa0008H22.1 81572 46452 49408 7 6,316,72,96,123,58,58, 12,18,334,406,502,625,683, 46452,46459,47231,47470,47708,48912,49350, 35 1 0 0 0 0 0 0 - SGN-E691797 812 90 126 C04HBa0008H22.1 81572 38302 38338 1 36, 686, 38302,