psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 461 0 0 0 0 0 0 0 - SGN-E555179 554 0 461 C04HBa0053M02.1 100452 68783 69244 1 461, 93, 68783, 37 0 0 0 0 0 1 19 + SGN-E553251 596 441 478 C04HBa0053M02.1 100452 45169 45225 2 15,22, 441,456, 45169,45203, 461 0 0 0 0 0 0 0 - SGN-E552457 485 0 461 C04HBa0053M02.1 100452 68783 69244 1 461, 24, 68783, 462 0 0 0 0 0 0 0 - SGN-E552693 634 0 462 C04HBa0053M02.1 100452 68782 69244 1 462, 172, 68782, 462 0 0 0 0 0 0 0 - SGN-E552699 535 0 462 C04HBa0053M02.1 100452 68782 69244 1 462, 73, 68782, 457 2 0 0 1 1 0 0 - SGN-E552770 669 0 460 C04HBa0053M02.1 100452 68785 69244 2 313,146, 209,523, 68785,69098, 546 2 0 0 0 0 3 233 + SGN-E205562 548 0 548 C04HBa0053M02.1 100452 36403 37184 4 188,147,81,132, 0,188,335,416, 36403,36674,36895,37052, 462 0 0 0 0 0 0 0 - SGN-E557045 499 0 462 C04HBa0053M02.1 100452 68782 69244 1 462, 37, 68782, 38 0 0 0 1 7 1 19 + SGN-E556364 654 596 641 C04HBa0053M02.1 100452 45169 45226 2 15,23, 596,618, 45169,45203, 38 2 0 0 0 0 1 17 + SGN-E557059 677 636 676 C04HBa0053M02.1 100452 45169 45226 2 15,25, 636,651, 45169,45201, 491 3 0 1 3 4 3 86 + SGN-E320823 499 0 499 C04HBa0053M02.1 100452 36164 36745 5 236,5,175,10,69, 0,238,243,419,430, 36164,36401,36407,36582,36676, 38 1 0 0 1 4 1 19 + SGN-E376338 395 277 320 C04HBa0053M02.1 100452 45169 45227 2 15,24, 277,296, 45169,45203, 65 1 0 0 2 11 1 36 + SGN-E396988 561 477 554 C04HBa0053M02.1 100452 96628 96730 3 32,22,12, 477,510,542, 96628,96660,96718, 32 0 0 0 0 0 0 0 + SGN-E396989 513 477 509 C04HBa0053M02.1 100452 96628 96660 1 32, 477, 96628, 625 1 0 0 0 0 1 83 + SGN-E243788 626 0 626 C04HBa0053M02.1 100452 36085 36794 2 506,120, 0,506, 36085,36674, 39 1 0 0 0 0 1 17 + SGN-E231681 349 301 341 C04HBa0053M02.1 100452 45169 45226 2 19,21, 301,320, 45169,45205, 42 1 0 0 0 0 1 19 + SGN-E719356 527 401 444 C04HBa0053M02.1 100452 45163 45225 2 21,22, 401,422, 45163,45203, 37 1 0 0 1 3 1 19 + SGN-E719396 608 495 536 C04HBa0053M02.1 100452 45169 45226 2 15,23, 495,513, 45169,45203, 42 2 0 0 0 0 1 13 + SGN-E719403 696 565 609 C04HBa0053M02.1 100452 45169 45226 2 21,23, 565,586, 45169,45203, 38 1 0 0 0 0 1 17 + SGN-E719973 574 535 574 C04HBa0053M02.1 100452 45169 45225 2 15,24, 535,550, 45169,45201, 41 1 0 0 0 0 1 19 + SGN-E722506 347 252 294 C04HBa0053M02.1 100452 45164 45225 2 20,22, 252,272, 45164,45203, 34 0 0 0 0 0 1 19 + SGN-E722999 683 649 683 C04HBa0053M02.1 100452 45169 45222 2 15,19, 649,664, 45169,45203, 666 3 0 0 1 2 4 234 + SGN-E736813 677 6 677 C04HBa0053M02.1 100452 36323 37226 5 268,147,81,86,87, 6,274,421,502,590, 36323,36674,36895,37052,37139, 731 10 0 0 2 2 1 172 + SGN-E736921 749 6 749 C04HBa0053M02.1 100452 32996 33909 4 33,78,436,194, 6,40,119,555, 32996,33029,33107,33715, 867 6 0 0 0 0 3 365 + SGN-E738097 881 0 873 C04HBa0053M02.1 100452 33432 34670 4 111,285,205,272, 0,111,396,601, 33432,33715,34078,34398, 36 1 0 0 0 0 1 15 + SGN-E711089 513 459 496 C04HBa0053M02.1 100452 45165 45217 2 19,18, 459,478, 45165,45199, 513 0 0 0 0 0 3 528 + SGN-E241742 561 11 524 C04HBa0053M02.1 100452 37394 38435 4 140,107,171,95, 11,151,258,429, 37394,37617,38168,38340, 38 0 0 0 0 0 2 118 + SGN-E243980 537 499 537 C04HBa0053M02.1 100452 45169 45325 3 9,24,5, 499,508,532, 45169,45201,45320, 473 3 0 0 0 0 1 440 + SGN-E245586 476 0 476 C04HBa0053M02.1 100452 34825 35741 2 206,270, 0,206, 34825,35471, 36 0 0 0 0 0 1 19 - SGN-E249157 636 0 36 C04HBa0053M02.1 100452 45169 45224 2 15,21, 600,615, 45169,45203, 558 3 0 0 0 0 3 233 + SGN-E248334 561 0 561 C04HBa0053M02.1 100452 36462 37256 4 129,147,81,204, 0,129,276,357, 36462,36674,36895,37052, 38 1 0 0 0 0 1 19 - SGN-E254765 319 15 54 C04HBa0053M02.1 100452 45164 45222 2 20,19, 265,285, 45164,45203, 297 0 0 1 0 0 2 527 + SGN-E262975 298 0 298 C04HBa0053M02.1 100452 37464 38289 3 70,107,121, 0,70,177, 37464,37617,38168, 310 2 0 1 2 6 2 448 + SGN-E220274 319 0 319 C04HBa0053M02.1 100452 37680 38441 4 44,53,171,45, 0,44,98,274, 37680,38168,38221,38396, 434 4 0 0 0 0 0 0 + SGN-E268721 438 0 438 C04HBa0053M02.1 100452 35958 36396 1 438, 0, 35958, 472 1 0 0 0 0 2 157 + SGN-E269756 480 0 473 C04HBa0053M02.1 100452 36290 36920 3 301,147,25, 0,301,448, 36290,36674,36895, 34 0 0 0 0 0 1 19 - SGN-E287304 593 5 39 C04HBa0053M02.1 100452 45169 45222 2 15,19, 554,569, 45169,45203, 36 1 0 0 0 0 1 19 + SGN-E292363 338 301 338 C04HBa0053M02.1 100452 45169 45225 2 15,22, 301,316, 45169,45203, 659 2 0 0 0 0 1 83 + SGN-E306944 661 0 661 C04HBa0053M02.1 100452 36049 36793 2 542,119, 0,542, 36049,36674, 540 0 0 0 0 0 1 172 + SGN-E324206 540 0 540 C04HBa0053M02.1 100452 33246 33958 2 297,243, 0,297, 33246,33715, 558 3 0 0 0 0 0 0 + SGN-E337830 561 0 561 C04HBa0053M02.1 100452 35880 36441 1 561, 0, 35880, 32 0 0 0 0 0 0 0 + SGN-E338817 469 433 465 C04HBa0053M02.1 100452 96628 96660 1 32, 433, 96628, 684 2 0 1 0 0 5 7253 - SGN-E339256 687 0 687 C04HBa0053M02.1 100452 47172 55112 6 224,72,120,134,111,26, 0,224,296,416,550,661, 47172,47741,48145,48363,54663,55086, 37 0 0 0 0 0 1 19 + SGN-E349437 500 458 495 C04HBa0053M02.1 100452 45169 45225 2 15,22, 458,473, 45169,45203, 642 0 0 0 0 0 3 643 + SGN-E349181 642 0 642 C04HBa0053M02.1 100452 37153 38438 4 125,140,107,270, 0,125,265,372, 37153,37394,37617,38168,