psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 438 6 0 0 0 0 3 2659 - SGN-E204643 453 0 444 C04HBa0066O12.1 70401 14033 17136 4 103,74,52,215, 9,112,186,238, 14033,15097,15533,16921, 480 0 0 0 0 0 1 289 - SGN-E204957 480 0 480 C04HBa0066O12.1 70401 33023 33792 2 131,349, 0,131, 33023,33443, 260 3 0 0 0 0 1 105 - SGN-E205669 610 347 610 C04HBa0066O12.1 70401 45169 45537 2 118,145, 0,118, 45169,45392, 497 0 0 0 0 0 1 289 - SGN-E211810 510 0 497 C04HBa0066O12.1 70401 33006 33792 2 148,349, 13,161, 33006,33443, 387 2 0 0 0 0 1 105 + SGN-E578426 742 16 405 C04HBa0066O12.1 70401 45043 45537 2 244,145, 16,260, 45043,45392, 384 2 0 1 0 0 3 107 - SGN-E321866 729 333 720 C04HBa0066O12.1 70401 45043 45537 4 29,31,182,145, 9,38,69,251, 45043,45073,45105,45392, 343 12 0 0 1 9 1 114 - SGN-E372596 728 331 695 C04HBa0066O12.1 70401 45068 45537 2 208,147, 33,250, 45068,45390, 363 2 0 0 0 0 2 106 - SGN-E372597 751 362 727 C04HBa0066O12.1 70401 45066 45537 3 66,154,145, 24,90,244, 45066,45133,45392, 48 4 0 0 0 0 0 0 - SGN-E372628 687 547 599 C04HBa0066O12.1 70401 17620 17672 1 52, 88, 17620, 48 4 0 0 0 0 0 0 - SGN-E373908 673 533 585 C04HBa0066O12.1 70401 17620 17672 1 52, 88, 17620, 774 2 0 1 0 0 4 9136 - SGN-E539009 777 0 777 C04HBa0066O12.1 70401 18210 28123 5 8,455,143,81,90, 0,8,463,606,687, 18210,18683,27281,27574,28033, 755 4 0 0 0 0 7 9169 - SGN-E539012 759 0 759 C04HBa0066O12.1 70401 19056 28984 8 82,143,81,147,100,27,146,33, 0,82,225,306,453,553,580,726, 19056,27281,27574,28033,28265,28628,28804,28951, 34 0 0 0 1 1 0 0 - SGN-E235477 561 526 561 C04HBa0066O12.1 70401 17650 17684 2 27,7, 0,28, 17650,17677, 379 1 0 0 0 0 0 0 + SGN-E238625 380 0 380 C04HBa0066O12.1 70401 6408 6788 1 380, 0, 6408, 508 0 0 0 0 0 1 289 - SGN-E239708 508 0 508 C04HBa0066O12.1 70401 33062 33859 2 92,416, 0,92, 33062,33443, 791 0 0 0 0 0 8 6453 - SGN-E723270 811 20 811 C04HBa0066O12.1 70401 9811 17055 9 72,90,74,52,141,102,74,52,134, 0,72,162,236,288,429,531,605,657, 9811,10201,11172,11453,12556,14034,15097,15533,16921, 827 0 0 0 0 0 1 1 + SGN-E702191 827 0 827 C04HBa0066O12.1 70401 4805 5633 2 795,32, 0,795, 4805,5601, 120 9 0 0 0 0 1 1 + SGN-E702191 827 698 827 C04HBa0066O12.1 70401 43590 43720 2 95,34, 698,793, 43590,43686, 342 17 0 0 1 1 1 106 - SGN-E712487 761 115 475 C04HBa0066O12.1 70401 45072 45537 2 212,147, 286,499, 45072,45390, 178 2 0 0 0 0 1 105 - SGN-E243208 485 305 485 C04HBa0066O12.1 70401 45252 45537 2 35,145, 0,35, 45252,45392, 526 0 0 0 0 0 4 875 - SGN-E249258 526 0 526 C04HBa0066O12.1 70401 27599 29000 5 56,147,100,27,196, 0,56,203,303,330, 27599,28033,28265,28628,28804, 43 0 0 0 1 10 2 33 + SGN-E253500 468 94 147 C04HBa0066O12.1 70401 43116 43192 3 26,7,10, 94,130,137, 43116,43152,43182, 564 0 0 0 1 10 2 1772 - SGN-E254618 574 0 574 C04HBa0066O12.1 70401 46620 48956 3 114,399,51, 0,114,523, 46620,48497,48905, 492 1 0 0 0 0 4 875 - SGN-E267688 493 0 493 C04HBa0066O12.1 70401 27585 28953 5 70,147,100,27,149, 0,70,217,317,344, 27585,28033,28265,28628,28804, 381 0 0 0 1 1 2 1073 - SGN-E220263 399 0 382 C04HBa0066O12.1 70401 45098 46552 4 189,143,19,30, 17,206,349,369, 45098,45392,46503,46522, 377 2 0 0 0 0 1 8143 - SGN-E234706 408 0 379 C04HBa0066O12.1 70401 18837 27359 2 301,78, 29,330, 18837,27281, 333 4 0 0 0 0 1 8143 - SGN-E234994 369 3 340 C04HBa0066O12.1 70401 18837 27317 2 301,36, 29,330, 18837,27281, 360 2 0 0 1 1 1 105 - SGN-E234728 381 0 363 C04HBa0066O12.1 70401 45041 45508 3 246,76,40, 18,264,341, 45041,45392,45468, 388 3 0 0 0 0 1 105 - SGN-E235016 409 0 391 C04HBa0066O12.1 70401 45041 45537 2 246,145, 18,264, 45041,45392, 359 2 0 0 0 0 1 105 - SGN-E234739 498 122 483 C04HBa0066O12.1 70401 45071 45537 2 216,145, 15,231, 45071,45392, 329 2 0 0 0 0 3 107 - SGN-E235027 346 0 331 C04HBa0066O12.1 70401 45071 45509 4 216,69,12,34, 15,231,300,312, 45071,45392,45462,45475, 251 2 0 0 1 1 0 0 - SGN-E237032 270 0 254 C04HBa0066O12.1 70401 46401 46654 2 222,31, 16,239, 46401,46623, 275 0 0 0 0 0 0 0 - SGN-E237428 291 0 275 C04HBa0066O12.1 70401 46401 46676 1 275, 16, 46401, 599 1 0 0 0 0 1 1763 - SGN-E276612 600 0 600 C04HBa0066O12.1 70401 46586 48949 2 148,452, 0,148, 46586,48497, 460 0 0 0 0 0 0 0 - SGN-E273806 460 0 460 C04HBa0066O12.1 70401 11948 12408 1 460, 0, 11948, 421 11 0 0 0 0 1 289 - SGN-E282573 432 0 432 C04HBa0066O12.1 70401 33136 33857 2 18,414, 0,18, 33136,33443, 504 1 0 0 0 0 4 875 - SGN-E279481 505 0 505 C04HBa0066O12.1 70401 27597 28977 5 58,147,100,27,173, 0,58,205,305,332, 27597,28033,28265,28628,28804, 453 1 0 0 0 0 0 0 - SGN-E282291 454 0 454 C04HBa0066O12.1 70401 48502 48956 1 454, 0, 48502, 102 3 0 0 0 0 0 0 - SGN-E292223 467 362 467 C04HBa0066O12.1 70401 45432 45537 1 105, 0, 45432, 450 11 0 0 0 0 0 0 - SGN-E298109 470 0 461 C04HBa0066O12.1 70401 48496 48957 1 461, 9, 48496, 536 0 0 0 0 0 1 1763 - SGN-E298029 536 0 536 C04HBa0066O12.1 70401 46658 48957 2 76,460, 0,76, 46658,48497, 144 0 0 0 0 0 0 0 - SGN-E301018 492 348 492 C04HBa0066O12.1 70401 45393 45537 1 144, 0, 45393, 317 0 0 0 2 2 2 3 - SGN-E307896 319 0 319 C04HBa0066O12.1 70401 48599 48919 4 12,251,27,27, 0,13,265,292, 48599,48611,48864,48892, 307 6 0 0 1 1 0 0 - SGN-E307900 314 0 314 C04HBa0066O12.1 70401 48606 48919 2 35,278, 0,36, 48606,48641, 144 0 0 0 0 0 0 0 - SGN-E326319 503 359 503 C04HBa0066O12.1 70401 45393 45537 1 144, 0, 45393, 674 4 0 1 0 0 7 6135 - SGN-E326943 679 0 679 C04HBa0066O12.1 70401 10225 17039 8 66,74,52,141,102,74,52,118, 0,66,140,192,333,435,509,561, 10225,11172,11453,12556,14034,15097,15533,16921, 379 0 0 0 0 0 3 497 - SGN-E324115 379 0 379 C04HBa0066O12.1 70401 28124 29000 4 56,100,27,196, 0,56,156,183, 28124,28265,28628,28804, 185 2 0 0 0 0 1 105 - SGN-E341279 548 361 548 C04HBa0066O12.1 70401 45245 45537 2 42,145, 0,42, 45245,45392, 271 5 0 0 0 0 1 105 - SGN-E341216 346 70 346 C04HBa0066O12.1 70401 45156 45537 2 131,145, 0,131, 45156,45392, 541 0 0 0 0 0 1 1763 - SGN-E335879 541 0 541 C04HBa0066O12.1 70401 46569 48873 2 165,376, 0,165, 46569,48497, 344 3 0 0 0 0 2 106 - SGN-E347302 715 368 715 C04HBa0066O12.1 70401 45084 45537 3 48,154,145, 0,48,202, 45084,45133,45392, 702 2 0 1 0 0 6 9168 - SGN-E347426 705 0 705 C04HBa0066O12.1 70401 19099 28972 7 39,143,81,147,100,27,168, 0,39,182,263,410,510,537, 19099,27281,27574,28033,28265,28628,28804, 354 2 0 0 0 0 1 105 - SGN-E352733 599 242 598 C04HBa0066O12.1 70401 45076 45537 2 211,145, 1,212, 45076,45392, 259 2 0 0 0 0 1 105 - SGN-E352181 283 0 261 C04HBa0066O12.1 70401 45047 45413 2 240,21, 22,262, 45047,45392, 539 3 0 1 1 1 6 4799 - SGN-E352103 544 0 544 C04HBa0066O12.1 70401 10216 15558 8 62,13,74,52,141,102,74,25, 0,63,76,150,202,343,445,519, 10216,10278,11172,11453,12556,14034,15097,15533, 73 3 0 0 1 13 3 14 + SGN-E361380 476 239 328 C04HBa0066O12.1 70401 66813 66903 4 18,6,29,23, 239,257,276,305, 66813,66842,66850,66880, 485 11 0 0 0 0 1 1763 - SGN-E360365 497 1 497 C04HBa0066O12.1 70401 46657 48916 2 77,419, 0,77, 46657,48497, 483 13 0 0 1 1 3 293 - SGN-E354687 497 0 497 C04HBa0066O12.1 70401 33063 33852 4 91,356,8,41, 0,91,448,456, 33063,33443,33802,33811,