psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 37 1 0 0 1 1 1 5 + SGN-E747697 426 183 222 C04HBa0080D03.1 88559 39508 39551 2 6,32, 183,190, 39508,39519, 2218 0 0 0 0 0 22 13710 - SGN-E746181 2235 1 2219 C04HBa0080D03.1 88559 8669 24597 23 465,77,113,84,110,98,20,76,98,61,48,32,29,98,20,63,112,86,25,60,52,374,17, 16,481,558,671,755,865,963,983,1059,1157,1218,1266,1298,1327,1425,1445,1508,1620,1706,1731,1791,1843,2217, 8669,9264,9553,9762,15188,15383,15667,15783,15956,16149,16299,16430,16727,17112,17319,17504,22720,22920,23097,23250,23418,24205,24580, 31 0 0 0 0 0 0 0 + SGN-E745449 1351 456 487 C04HBa0080D03.1 88559 39520 39551 1 31, 456, 39520, 31 0 0 0 0 0 0 0 + SGN-E744990 1820 522 553 C04HBa0080D03.1 88559 39520 39551 1 31, 522, 39520, 2140 13 0 0 8 18 23 13719 - SGN-E744723 2267 49 2220 C04HBa0080D03.1 88559 8668 24540 30 4,37,13,5,15,6,19,8,349,77,113,84,110,98,20,76,98,61,48,32,29,98,20,63,112,86,25,60,52,335, 47,52,90,104,116,136,143,163,172,521,598,711,795,905,1003,1023,1099,1197,1258,1306,1338,1367,1465,1485,1548,1660,1746,1771,1831,1883, 8668,8672,8709,8722,8733,8752,8758,8777,8785,9264,9553,9762,15188,15383,15667,15783,15956,16149,16299,16430,16727,17112,17319,17504,22720,22920,23097,23250,23418,24205, 31 0 0 0 0 0 0 0 + SGN-E744933 1596 303 334 C04HBa0080D03.1 88559 39520 39551 1 31, 303, 39520, 31 0 0 0 0 0 0 0 - SGN-E744578 850 715 746 C04HBa0080D03.1 88559 39520 39551 1 31, 104, 39520, 269 15 0 0 1 3 2 36 + SGN-E204223 580 293 580 C04HBa0080D03.1 88559 44663 44983 4 17,24,218,25, 293,310,334,555, 44663,44689,44740,44958, 37 1 0 0 0 0 0 0 + SGN-E204092 457 415 453 C04HBa0080D03.1 88559 44663 44701 1 38, 415, 44663, 31 0 0 0 0 0 0 0 + SGN-E211981 537 173 204 C04HBa0080D03.1 88559 39520 39551 1 31, 173, 39520, 59 3 0 0 0 0 1 3 + SGN-E577899 392 0 62 C04HBa0080D03.1 88559 44732 44797 2 57,5, 0,57, 44732,44792, 99 4 0 0 0 0 0 0 - SGN-E577960 387 284 387 C04HBa0080D03.1 88559 44958 45061 1 103, 0, 44958, 31 0 0 0 0 0 0 0 - SGN-E578205 735 25 56 C04HBa0080D03.1 88559 39520 39551 1 31, 679, 39520, 229 17 0 0 1 1 0 0 + SGN-E578392 506 257 504 C04HBa0080D03.1 88559 44663 44909 2 58,188, 257,316, 44663,44721, 509 8 0 0 0 0 1 2850 - SGN-E317606 517 0 517 C04HBa0080D03.1 88559 33324 36691 2 119,398, 0,119, 33324,36293, 567 5 0 0 0 0 1 2850 - SGN-E311835 572 0 572 C04HBa0080D03.1 88559 33206 36628 2 237,335, 0,237, 33206,36293, 638 4 0 0 1 1 3 341 - SGN-E372958 650 0 643 C04HBa0080D03.1 88559 77632 78615 5 121,74,231,85,131, 7,128,203,434,519, 77632,77754,77828,78318,78484, 125 0 0 0 0 0 0 0 - SGN-E372959 562 436 561 C04HBa0080D03.1 88559 84837 84962 1 125, 1, 84837, 243 16 0 0 0 0 2 36 + SGN-E374844 554 293 552 C04HBa0080D03.1 88559 44663 44958 3 17,24,218, 293,310,334, 44663,44689,44740, 125 3 0 0 1 1 1 459 - SGN-E376754 662 533 662 C04HBa0080D03.1 88559 44474 45061 3 7,79,42, 0,7,87, 44474,44940,45019, 212 8 0 0 1 3 0 0 + SGN-E377238 484 19 242 C04HBa0080D03.1 88559 44827 45047 2 131,89, 19,153, 44827,44958, 84 6 0 0 0 0 1 21 - SGN-E377316 765 672 762 C04HBa0080D03.1 88559 44950 45061 2 61,29, 3,64, 44950,45032, 49 2 0 0 1 58 1 67 - SGN-E390054 690 409 518 C04HBa0080D03.1 88559 86260 86378 2 36,15, 172,266, 86260,86363, 73 2 0 0 1 6 2 172 + SGN-E391901 346 265 346 C04HBa0080D03.1 88559 44662 44909 3 52,15,8, 265,323,338, 44662,44719,44901, 37 1 0 0 0 0 0 0 + SGN-E394807 217 176 214 C04HBa0080D03.1 88559 44663 44701 1 38, 176, 44663, 38 0 0 0 0 0 0 0 + SGN-E398336 459 417 455 C04HBa0080D03.1 88559 44663 44701 1 38, 417, 44663, 642 2 0 0 0 0 2 342 - SGN-E539889 671 0 644 C04HBa0080D03.1 88559 8644 9630 3 490,77,77, 27,517,594, 8644,9264,9553, 764 3 0 0 0 0 8 6244 - SGN-E539891 767 0 767 C04HBa0080D03.1 88559 9007 16018 9 127,77,113,84,110,98,20,76,62, 0,127,204,317,401,511,609,629,705, 9007,9264,9553,9762,15188,15383,15667,15783,15956, 697 0 0 0 1 9 3 238 - SGN-E545297 720 0 706 C04HBa0080D03.1 88559 29205 30140 5 95,203,231,87,81, 14,118,321,552,639, 29205,29300,29570,29890,30059, 72 4 0 0 0 0 0 0 - SGN-E546063 812 708 784 C04HBa0080D03.1 88559 44722 44798 1 76, 28, 44722, 50 0 0 0 1 1 0 0 + SGN-E547334 453 381 432 C04HBa0080D03.1 88559 44663 44713 2 46,4, 381,428, 44663,44709, 50 0 0 0 1 1 0 0 + SGN-E547335 453 381 432 C04HBa0080D03.1 88559 44663 44713 2 46,4, 381,428, 44663,44709, 49 2 0 0 1 58 1 67 - SGN-E549969 718 409 518 C04HBa0080D03.1 88559 86260 86378 2 36,15, 200,294, 86260,86363, 212 8 0 0 1 3 0 0 + SGN-E233594 310 19 242 C04HBa0080D03.1 88559 44827 45047 2 131,89, 19,153, 44827,44958, 212 8 0 0 1 3 0 0 + SGN-E233735 514 19 242 C04HBa0080D03.1 88559 44827 45047 2 131,89, 19,153, 44827,44958, 212 8 0 0 1 3 0 0 + SGN-E237992 666 18 241 C04HBa0080D03.1 88559 44827 45047 2 131,89, 18,152, 44827,44958, 89 6 0 0 0 0 0 0 - SGN-E240526 430 335 430 C04HBa0080D03.1 88559 44970 45065 1 95, 0, 44970, 31 0 0 0 0 0 0 0 + SGN-E240474 370 138 169 C04HBa0080D03.1 88559 39520 39551 1 31, 138, 39520, 212 8 0 0 1 3 0 0 + SGN-E240879 434 19 242 C04HBa0080D03.1 88559 44827 45047 2 131,89, 19,153, 44827,44958, 34 1 0 0 0 0 0 0 + SGN-E228026 567 58 93 C04HBa0080D03.1 88559 41171 41206 1 35, 58, 41171, 212 8 0 0 1 3 0 0 + SGN-E242674 528 19 242 C04HBa0080D03.1 88559 44827 45047 2 131,89, 19,153, 44827,44958, 212 8 0 0 1 3 0 0 + SGN-E233074 643 19 242 C04HBa0080D03.1 88559 44827 45047 2 131,89, 19,153, 44827,44958, 41 0 0 0 0 0 0 0 + SGN-E719799 683 557 598 C04HBa0080D03.1 88559 44663 44704 1 41, 557, 44663, 38 0 0 0 0 0 0 0 + SGN-E721929 648 557 595 C04HBa0080D03.1 88559 44663 44701 1 38, 557, 44663, 690 0 0 0 0 0 2 340 - SGN-E732042 727 33 723 C04HBa0080D03.1 88559 77632 78662 3 427,85,178, 4,431,516, 77632,78318,78484, 358 1 0 0 0 0 3 1024 - SGN-E700042 759 400 759 C04HBa0080D03.1 88559 83582 84965 4 53,78,96,132, 0,53,131,227, 83582,83745,83948,84833, 907 0 0 0 1 1 5 3191 - SGN-E701306 912 4 912 C04HBa0080D03.1 88559 29354 33452 7 60,89,231,87,85,350,5, 0,61,150,381,468,553,903, 29354,29414,29570,29890,30059,33094,33447, 889 0 0 0 0 0 0 0 + SGN-E706070 889 0 889 C04HBa0080D03.1 88559 75598 76487 1 889, 0, 75598, 643 2 0 1 0 0 6 5045 - SGN-E708809 859 213 859 C04HBa0080D03.1 88559 78353 84044 7 50,176,108,76,62,78,96, 0,50,226,334,410,472,550, 78353,78484,82944,83343,83573,83745,83948, 113 5 0 0 2 126 4 36 - SGN-E711057 520 84 328 C04HBa0080D03.1 88559 44901 45055 5 10,18,11,5,74, 192,209,227,238,362, 44901,44920,44959,44973,44981, 31 0 0 0 0 0 0 0 + SGN-E243086 383 64 95 C04HBa0080D03.1 88559 39520 39551 1 31, 64, 39520, 31 0 0 0 0 0 0 0 + SGN-E244363 648 532 563 C04HBa0080D03.1 88559 39520 39551 1 31, 532, 39520, 31 0 0 0 0 0 0 0 + SGN-E246187 522 461 492 C04HBa0080D03.1 88559 39520 39551 1 31, 461, 39520, 31 0 0 0 0 0 0 0 + SGN-E247800 632 429 460 C04HBa0080D03.1 88559 39520 39551 1 31, 429, 39520, 31 0 0 0 0 0 0 0 + SGN-E248825 578 429 460 C04HBa0080D03.1 88559 39520 39551 1 31, 429, 39520, 243 11 0 0 2 7 4 23 - SGN-E249253 618 357 618 C04HBa0080D03.1 88559 44784 45061 6 18,4,98,5,26,103, 0,18,27,127,132,158, 44784,44806,44811,44909,44931,44958, 31 0 0 0 0 0 0 0 + SGN-E249280 642 526 557 C04HBa0080D03.1 88559 39520 39551 1 31, 526, 39520, 31 0 0 0 0 0 0 0 + SGN-E248217 471 135 166 C04HBa0080D03.1 88559 39520 39551 1 31, 135, 39520, 293 14 0 0 2 12 4 28 - SGN-E253695 540 221 540 C04HBa0080D03.1 88559 44726 45061 5 76,4,98,26,103, 0,76,85,190,216, 44726,44806,44811,44931,44958, 58 1 0 0 0 0 0 0 + SGN-E256217 514 0 59 C04HBa0080D03.1 88559 45005 45064 1 59, 0, 45005, 31 0 0 0 0 0 0 0 + SGN-E257926 530 309 340 C04HBa0080D03.1 88559 39520 39551 1 31, 309, 39520, 31 0 0 0 0 0 0 0 + SGN-E266579 537 60 91 C04HBa0080D03.1 88559 39520 39551 1 31, 60, 39520, 31 0 0 0 0 0 0 0 + SGN-E265318 569 60 91 C04HBa0080D03.1 88559 39520 39551 1 31, 60, 39520, 31 0 0 0 0 0 0 0 - SGN-E218670 353 204 235 C04HBa0080D03.1 88559 39520 39551 1 31, 118, 39520, 99 2 0 0 1 44 2 23 - SGN-E217478 385 220 365 C04HBa0080D03.1 88559 44937 45061 3 33,39,29, 20,97,136, 44937,44972,45032, 407 21 0 0 6 22 6 27 - SGN-E226335 450 0 450 C04HBa0080D03.1 88559 40275 40730 12 28,51,13,6,6,9,42,91,94,77,5,6, 0,29,90,109,115,122,134,176,267,361,438,444, 40275,40303,40366,40379,40389,40395,40404,40448,40540,40641,40719,40724, 103 2 0 0 2 45 2 23 - SGN-E228654 468 303 453 C04HBa0080D03.1 88559 44933 45061 4 4,33,39,29, 15,20,97,136, 44933,44937,44972,45032, 103 2 0 0 1 44 2 23 - SGN-E229134 397 232 381 C04HBa0080D03.1 88559 44933 45061 3 37,39,29, 16,97,136, 44933,44972,45032, 31 0 0 0 0 0 0 0 - SGN-E230428 337 185 216 C04HBa0080D03.1 88559 39520 39551 1 31, 121, 39520, 31 0 0 0 0 0 0 0 - SGN-E230928 384 232 263 C04HBa0080D03.1 88559 39520 39551 1 31, 121, 39520, 40 0 0 0 0 0 0 0 + SGN-E233998 377 319 359 C04HBa0080D03.1 88559 44664 44704 1 40, 319, 44664, 39 0 0 0 0 0 0 0 + SGN-E234253 351 293 332 C04HBa0080D03.1 88559 44664 44703 1 39, 293, 44664, 615 2 0 0 0 0 3 3121 - SGN-E269799 617 0 617 C04HBa0080D03.1 88559 29692 33430 4 109,87,85,336, 0,109,196,281, 29692,29890,30059,33094, 31 0 0 0 0 0 0 0 + SGN-E272959 392 184 215 C04HBa0080D03.1 88559 39520 39551 1 31, 184, 39520, 537 7 0 0 0 0 1 2850 - SGN-E273065 544 0 544 C04HBa0080D03.1 88559 33276 36670 2 167,377, 0,167, 33276,36293, 633 7 0 0 0 0 1 2850 - SGN-E268946 640 0 640 C04HBa0080D03.1 88559 33180 36670 2 263,377, 0,263, 33180,36293, 31 0 0 0 0 0 0 0 + SGN-E270536 526 50 81 C04HBa0080D03.1 88559 39520 39551 1 31, 50, 39520, 596 2 0 0 0 0 1 78 - SGN-E277031 603 0 598 C04HBa0080D03.1 88559 8598 9274 2 588,10, 5,593, 8598,9264, 392 2 0 0 0 0 5 5806 - SGN-E288006 404 10 404 C04HBa0080D03.1 88559 9821 16021 6 25,110,98,20,76,65, 0,25,135,233,253,329, 9821,15188,15383,15667,15783,15956, 31 0 0 0 0 0 0 0 + SGN-E290690 646 533 564 C04HBa0080D03.1 88559 39520 39551 1 31, 533, 39520, 31 0 0 0 0 0 0 0 - SGN-E292312 497 349 380 C04HBa0080D03.1 88559 39520 39551 1 31, 117, 39520, 31 0 0 0 0 0 0 0 + SGN-E294577 535 256 287 C04HBa0080D03.1 88559 39520 39551 1 31, 256, 39520, 32 0 0 0 0 0 0 0 - SGN-E298626 468 436 468 C04HBa0080D03.1 88559 84930 84962 1 32, 0, 84930, 469 17 0 0 1 11 2 2860 - SGN-E298045 497 0 497 C04HBa0080D03.1 88559 33351 36697 3 92,289,105, 0,92,392, 33351,36293,36592, 38 0 0 0 0 0 3 6 + SGN-E326023 496 110 148 C04HBa0080D03.1 88559 72032 72076 4 24,4,4,6, 110,134,138,142, 72032,72057,72062,72070, 501 1 0 0 0 0 0 0 - SGN-E333817 502 0 502 C04HBa0080D03.1 88559 60905 61407 1 502, 0, 60905, 38 0 0 0 0 0 3 6 + SGN-E333993 355 119 157 C04HBa0080D03.1 88559 72032 72076 4 24,4,4,6, 119,143,147,151, 72032,72057,72062,72070, 38 0 0 0 0 0 3 6 + SGN-E329888 584 96 134 C04HBa0080D03.1 88559 72032 72076 4 24,4,4,6, 96,120,124,128, 72032,72057,72062,72070, 38 0 0 0 0 0 3 6 + SGN-E331093 512 126 164 C04HBa0080D03.1 88559 72032 72076 4 24,4,4,6, 126,150,154,158, 72032,72057,72062,72070, 489 4 0 0 0 0 1 2850 - SGN-E330726 493 0 493 C04HBa0080D03.1 88559 33245 36588 2 198,295, 0,198, 33245,36293, 31 0 0 0 0 0 0 0 + SGN-E324336 635 303 334 C04HBa0080D03.1 88559 39520 39551 1 31, 303, 39520, 31 0 0 0 0 0 0 0 + SGN-E313995 539 478 509 C04HBa0080D03.1 88559 39520 39551 1 31, 478, 39520, 266 4 0 0 0 0 0 0 - SGN-E337974 270 0 270 C04HBa0080D03.1 88559 36367 36637 1 270, 0, 36367, 107 2 0 1 0 0 0 0 - SGN-E338630 520 410 520 C04HBa0080D03.1 88559 84855 84965 1 110, 0, 84855, 31 0 0 0 0 0 0 0 + SGN-E335905 417 105 136 C04HBa0080D03.1 88559 39523 39554 1 31, 105, 39523, 31 0 0 0 0 0 0 0 + SGN-E344958 738 513 544 C04HBa0080D03.1 88559 39520 39551 1 31, 513, 39520, 31 0 0 0 0 0 0 0 + SGN-E345091 728 482 513 C04HBa0080D03.1 88559 39520 39551 1 31, 482, 39520, 31 0 0 0 0 0 0 0 + SGN-E345941 684 293 324 C04HBa0080D03.1 88559 39520 39551 1 31, 293, 39520, 31 0 0 0 0 0 0 0 + SGN-E341802 688 134 165 C04HBa0080D03.1 88559 39523 39554 1 31, 134, 39523, 646 3 0 0 1 9 3 238 - SGN-E349107 658 0 658 C04HBa0080D03.1 88559 29237 30124 5 60,206,231,87,65, 0,69,275,506,593, 29237,29297,29570,29890,30059, 37 1 0 0 1 1 1 5 + SGN-E741115 403 183 222 C04HBa0080D03.1 88559 39508 39551 2 6,32, 183,190, 39508,39519, 49 1 0 0 0 0 0 0 + SGN-E362032 430 380 430 C04HBa0080D03.1 88559 44663 44713 1 50, 380, 44663, 557 17 0 0 4 22 3 158 - SGN-E689789 603 7 603 C04HBa0080D03.1 88559 29247 29979 7 15,38,106,4,91,231,89, 0,16,63,170,185,276,507, 29247,29262,29300,29406,29412,29570,29890, 574 20 0 0 1 1 3 346 - SGN-E696264 618 0 595 C04HBa0080D03.1 88559 8668 9608 5 118,137,207,77,55, 23,141,279,486,563, 8668,8790,8927,9264,9553, 586 7 0 0 1 1 3 346 - SGN-E692424 617 0 594 C04HBa0080D03.1 88559 8669 9608 5 117,137,207,77,55, 23,140,278,485,562, 8669,8790,8927,9264,9553, 371 9 0 0 1 10 2 68 + SGN-E359501 394 4 394 C04HBa0080D03.1 88559 29256 29704 3 40,206,134, 4,54,260, 29256,29297,29570,