psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 37 0 0 0 1 2 1 1 + SGN-E747594 1870 1797 1836 C04HBa0128G23.1 153634 61110 61148 3 8,8,21, 1797,1807,1815, 61110,61118,61127, 473 23 0 0 2 3 4 539 - SGN-E747163 499 0 499 C04HBa0128G23.1 153634 6397 7432 5 206,102,3,131,54, 0,207,309,312,445, 6397,6685,6797,6831,7378, 763 28 0 0 5 9 7 741 - SGN-E745696 1954 290 1090 C04HBa0128G23.1 153634 6144 7676 10 116,234,102,3,131,110,25,51,15,4, 864,980,1215,1317,1320,1453,1566,1591,1644,1660, 6144,6369,6685,6797,6831,7378,7488,7605,7657,7672, 149 4 0 0 0 0 1 1 + SGN-E745305 838 190 343 C04HBa0128G23.1 153634 33388 33542 2 115,38, 190,305, 33388,33504, 34 0 0 0 1 1 0 0 + SGN-E744976 1460 1401 1436 C04HBa0128G23.1 153634 32819 32853 2 4,30, 1401,1406, 32819,32823, 44 0 0 0 1 1 1 2 - SGN-E744976 1460 1402 1447 C04HBa0128G23.1 153634 61102 61148 2 9,35, 13,23, 61102,61113, 36 0 0 0 0 0 1 5 + SGN-E744927 583 431 467 C04HBa0128G23.1 153634 32821 32862 2 30,6, 431,461, 32821,32856, 543 21 0 0 4 8 6 632 - SGN-E553992 833 261 833 C04HBa0128G23.1 153634 6476 7672 8 127,102,3,131,110,25,51,15, 0,128,230,233,366,479,504,557, 6476,6685,6797,6831,7378,7488,7605,7657, 647 16 0 0 2 4 2 3 - SGN-E214349 667 0 667 C04HBa0128G23.1 153634 39565 40231 3 148,193,322, 0,149,345, 39565,39715,39909, 30 0 0 0 0 0 0 0 + SGN-E215060 595 554 584 C04HBa0128G23.1 153634 32823 32853 1 30, 554, 32823, 271 11 0 0 2 2 2 60 + SGN-E577586 726 0 284 C04HBa0128G23.1 153634 42443 42785 5 44,35,104,61,38, 0,44,80,185,246, 42443,42499,42534,42638,42747, 38 0 0 0 0 0 1 4 + SGN-E378372 702 385 423 C04HBa0128G23.1 153634 61106 61148 2 6,32, 385,391, 61106,61116, 32 0 0 0 0 0 0 0 + SGN-E369471 766 0 32 C04HBa0128G23.1 153634 61115 61147 1 32, 0, 61115, 37 2 0 0 0 0 0 0 + SGN-E370527 430 208 247 C04HBa0128G23.1 153634 41852 41891 1 39, 208, 41852, 39 0 0 0 0 0 1 5 + SGN-E374378 673 446 485 C04HBa0128G23.1 153634 61103 61147 2 7,32, 446,453, 61103,61115, 38 0 0 0 0 0 1 4 - SGN-E374379 719 651 689 C04HBa0128G23.1 153634 61106 61148 2 6,32, 30,36, 61106,61116, 646 26 0 0 1 1 0 0 - SGN-E378122 673 0 673 C04HBa0128G23.1 153634 41579 42251 2 532,140, 0,533, 41579,42111, 640 14 0 0 3 5 2 3 - SGN-E389903 717 6 665 C04HBa0128G23.1 153634 39479 40136 4 234,193,168,59, 52,287,483,652, 39479,39715,39909,40077, 404 9 0 0 0 0 1 1 - SGN-E392241 418 0 413 C04HBa0128G23.1 153634 40347 40761 2 103,310, 5,108, 40347,40451, 40 0 0 0 1 13 0 0 - SGN-E393275 269 109 162 C04HBa0128G23.1 153634 61114 61154 2 33,7, 107,153, 61114,61147, 37 2 0 0 0 0 0 0 + SGN-E396329 668 445 484 C04HBa0128G23.1 153634 41852 41891 1 39, 445, 41852, 37 2 0 0 0 0 0 0 + SGN-E397510 388 144 183 C04HBa0128G23.1 153634 41852 41891 1 39, 144, 41852, 37 2 0 0 0 0 0 0 + SGN-E397614 335 112 151 C04HBa0128G23.1 153634 41852 41891 1 39, 112, 41852, 36 2 0 0 0 0 0 0 + SGN-E397627 337 115 153 C04HBa0128G23.1 153634 41853 41891 1 38, 115, 41853, 37 2 0 0 0 0 0 0 + SGN-E397769 566 342 381 C04HBa0128G23.1 153634 41852 41891 1 39, 342, 41852, 37 2 0 0 0 0 0 0 + SGN-E397777 457 233 272 C04HBa0128G23.1 153634 41852 41891 1 39, 233, 41852, 37 2 0 0 0 0 0 0 + SGN-E398758 514 291 330 C04HBa0128G23.1 153634 41852 41891 1 39, 291, 41852, 638 27 0 0 1 1 3 3 - SGN-E537998 677 0 666 C04HBa0128G23.1 153634 41574 42242 5 6,6,21,501,131, 11,17,23,44,546, 41574,41581,41588,41610,42111, 38 2 0 0 0 0 0 0 - SGN-E545880 756 109 149 C04HBa0128G23.1 153634 39814 39854 1 40, 607, 39814, 32 0 0 0 0 0 0 0 + SGN-E548291 558 0 32 C04HBa0128G23.1 153634 61115 61147 1 32, 0, 61115, 641 14 0 0 2 4 2 3 - SGN-E550053 723 4 663 C04HBa0128G23.1 153634 39479 40137 3 234,193,228, 60,295,491, 39479,39715,39909, 140 5 0 0 0 0 1 109 - SGN-E202830 664 7 152 C04HBa0128G23.1 153634 6144 6398 2 116,29, 512,628, 6144,6369, 199 6 0 0 3 6 2 93 - SGN-E202960 499 258 469 C04HBa0128G23.1 153634 7378 7676 5 110,25,51,15,4, 30,143,168,221,237, 7378,7488,7605,7657,7672, 609 14 0 0 1 2 2 2 - SGN-E235531 625 0 625 C04HBa0128G23.1 153634 40135 40760 4 107,65,142,309, 0,107,174,316, 40135,40243,40308,40451, 392 9 0 0 1 3 1 1 - SGN-E233596 404 0 404 C04HBa0128G23.1 153634 39739 40141 2 169,232, 0,172, 39739,39909, 333 8 0 0 0 0 1 1 - SGN-E228065 341 0 341 C04HBa0128G23.1 153634 40418 40760 2 32,309, 0,32, 40418,40451, 32 1 0 0 0 0 0 0 + SGN-E242557 540 368 401 C04HBa0128G23.1 153634 61116 61149 1 33, 368, 61116, 32 1 0 0 0 0 0 0 + SGN-E242633 568 368 401 C04HBa0128G23.1 153634 61116 61149 1 33, 368, 61116, 32 1 0 0 0 0 0 0 + SGN-E242812 626 368 401 C04HBa0128G23.1 153634 61116 61149 1 33, 368, 61116, 32 1 0 0 0 0 0 0 + SGN-E242889 540 368 401 C04HBa0128G23.1 153634 61116 61149 1 33, 368, 61116, 62 3 0 0 0 0 0 0 - SGN-E231461 388 0 65 C04HBa0128G23.1 153634 6144 6209 1 65, 323, 6144, 471 22 0 0 3 4 5 540 - SGN-E725636 497 0 497 C04HBa0128G23.1 153634 6393 7426 7 23,4,182,102,3,131,48, 0,23,28,211,313,316,449, 6393,6417,6421,6685,6797,6831,7378, 333 17 0 0 0 0 1 109 - SGN-E726922 924 20 370 C04HBa0128G23.1 153634 6144 6603 2 116,234, 554,670, 6144,6369, 278 13 0 0 4 8 3 509 - SGN-E728702 573 274 573 C04HBa0128G23.1 153634 6876 7676 6 86,110,25,51,15,4, 0,88,201,226,279,295, 6876,7378,7488,7605,7657,7672, 498 24 0 1 1 1 4 232 - SGN-E729326 524 0 524 C04HBa0128G23.1 153634 6145 6900 5 115,234,102,3,69, 0,115,350,452,455, 6145,6369,6685,6797,6831, 436 19 0 0 5 9 5 632 - SGN-E730005 736 272 736 C04HBa0128G23.1 153634 6589 7676 8 14,98,138,110,25,51,15,4, 0,15,113,253,366,391,444,460, 6589,6685,6824,7378,7488,7605,7657,7672, 481 19 0 0 5 9 6 632 - SGN-E731890 778 269 778 C04HBa0128G23.1 153634 6544 7676 9 59,102,3,131,110,25,51,15,4, 0,60,162,165,298,411,436,489,505, 6544,6685,6797,6831,7378,7488,7605,7657,7672, 32 0 0 0 0 0 0 0 + SGN-E719256 531 261 293 C04HBa0128G23.1 153634 61116 61148 1 32, 261, 61116, 302 11 0 0 0 0 1 109 - SGN-E735644 781 1 314 C04HBa0128G23.1 153634 6144 6566 2 116,197, 467,583, 6144,6369, 626 24 0 0 5 9 6 632 - SGN-E737642 672 13 672 C04HBa0128G23.1 153634 6394 7676 9 209,102,3,131,110,25,51,15,4, 0,210,312,315,448,561,586,639,655, 6394,6685,6797,6831,7378,7488,7605,7657,7672, 410 16 0 0 2 14 3 198 - SGN-E737797 846 0 440 C04HBa0128G23.1 153634 6144 6768 4 98,11,234,83, 406,517,528,763, 6144,6249,6369,6685, 293 11 0 0 0 0 1 109 - SGN-E737835 708 0 304 C04HBa0128G23.1 153634 6144 6557 2 116,188, 404,520, 6144,6369, 618 24 0 0 7 11 8 634 - SGN-E738136 932 279 932 C04HBa0128G23.1 153634 6400 7676 13 16,4,41,4,136,102,3,131,110,25,51,15,4, 0,16,21,62,67,204,306,309,442,555,580,633,649, 6400,6417,6421,6463,6467,6685,6797,6831,7378,7488,7605,7657,7672, 620 24 0 0 5 9 7 633 - SGN-E738546 897 244 897 C04HBa0128G23.1 153634 6399 7676 10 17,186,102,3,131,110,25,51,15,4, 0,17,204,306,309,442,555,580,633,649, 6399,6417,6685,6797,6831,7378,7488,7605,7657,7672, 75 3 0 0 0 0 1 13 - SGN-E738751 950 1 79 C04HBa0128G23.1 153634 6131 6222 2 8,70, 871,879, 6131,6152, 532 21 0 0 7 15 7 638 - SGN-E739725 839 271 839 C04HBa0128G23.1 153634 6485 7676 11 52,5,55,102,3,131,110,25,51,15,4, 0,57,63,119,221,224,357,470,495,548,564, 6485,6543,6548,6685,6797,6831,7378,7488,7605,7657,7672, 302 11 0 0 0 0 1 109 - SGN-E740206 880 1 314 C04HBa0128G23.1 153634 6144 6566 2 116,197, 566,682, 6144,6369, 482 15 0 0 1 30 3 272 - SGN-E697260 841 2 529 C04HBa0128G23.1 153634 6152 6921 4 108,225,67,97, 312,420,675,742, 6152,6369,6716,6824, 465 18 0 0 5 9 6 632 - SGN-E697514 775 283 775 C04HBa0128G23.1 153634 6561 7676 9 42,102,3,131,110,25,51,15,4, 0,43,145,148,281,394,419,472,488, 6561,6685,6797,6831,7378,7488,7605,7657,7672, 149 5 0 0 0 0 1 109 - SGN-E703312 817 0 154 C04HBa0128G23.1 153634 6144 6407 2 116,38, 663,779, 6144,6369, 487 18 0 0 5 9 6 632 - SGN-E704613 791 271 785 C04HBa0128G23.1 153634 6539 7676 9 64,102,3,131,110,25,51,15,4, 6,71,173,176,309,422,447,500,516, 6539,6685,6797,6831,7378,7488,7605,7657,7672, 290 11 0 0 0 0 1 109 - SGN-E706263 837 0 301 C04HBa0128G23.1 153634 6144 6554 2 116,185, 536,652, 6144,6369, 565 22 0 0 5 9 7 633 - SGN-E707241 870 274 870 C04HBa0128G23.1 153634 6456 7676 10 147,102,3,114,16,110,25,51,15,4, 0,148,250,253,367,385,498,523,576,592, 6456,6685,6797,6831,6946,7378,7488,7605,7657,7672, 561 22 0 0 5 9 6 632 - SGN-E707874 857 265 857 C04HBa0128G23.1 153634 6461 7676 9 142,102,3,131,110,25,51,15,4, 0,143,245,248,381,494,519,572,588, 6461,6685,6797,6831,7378,7488,7605,7657,7672, 32 0 0 0 0 0 0 0 - SGN-E242278 536 493 525 C04HBa0128G23.1 153634 61115 61147 1 32, 11, 61115, 30 0 0 0 0 0 0 0 + SGN-E244290 430 318 348 C04HBa0128G23.1 153634 32821 32851 1 30, 318, 32821, 30 0 0 0 0 0 0 0 + SGN-E249876 613 445 475 C04HBa0128G23.1 153634 32821 32851 1 30, 445, 32821, 31 0 0 0 0 0 0 0 - SGN-E248713 699 575 606 C04HBa0128G23.1 153634 32825 32856 1 31, 93, 32825, 152 4 0 0 3 6 2 93 + SGN-E281269 420 0 162 C04HBa0128G23.1 153634 7427 7676 5 61,25,51,15,4, 0,64,89,142,158, 7427,7488,7605,7657,7672, 137 8 0 0 1 1 1 109 + SGN-E281547 234 81 227 C04HBa0128G23.1 153634 6144 6398 3 95,21,29, 81,177,198, 6144,6239,6369, 157 4 0 0 3 6 2 93 + SGN-E226442 430 0 167 C04HBa0128G23.1 153634 7422 7676 5 66,25,51,15,4, 0,69,94,147,163, 7422,7488,7605,7657,7672, 32 0 0 0 0 0 0 0 + SGN-E236685 308 125 157 C04HBa0128G23.1 153634 61115 61147 1 32, 125, 61115, 104 5 0 0 0 0 0 0 - SGN-E283523 423 0 109 C04HBa0128G23.1 153634 6144 6253 1 109, 314, 6144, 143 5 0 0 0 0 1 109 - SGN-E281126 475 0 148 C04HBa0128G23.1 153634 6144 6401 2 116,32, 327,443, 6144,6369, 31 0 0 0 0 0 0 0 + SGN-E292622 358 65 96 C04HBa0128G23.1 153634 32825 32856 1 31, 65, 32825, 40 0 0 0 0 0 1 19 - SGN-E303073 441 109 149 C04HBa0128G23.1 153634 61115 61174 2 32,8, 292,324, 61115,61166, 39 0 0 0 0 0 1 4 + SGN-E326023 496 115 154 C04HBa0128G23.1 153634 61105 61148 2 7,32, 115,122, 61105,61116, 34 0 0 0 1 2 0 0 + SGN-E333458 581 120 156 C04HBa0128G23.1 153634 32819 32853 2 5,29, 120,127, 32819,32824, 34 0 0 0 1 2 0 0 + SGN-E334222 677 120 156 C04HBa0128G23.1 153634 32819 32853 2 5,29, 120,127, 32819,32824, 354 17 0 2 4 8 3 509 - SGN-E334360 645 264 645 C04HBa0128G23.1 153634 6794 7676 6 168,110,25,51,15,4, 0,170,283,308,361,377, 6794,7378,7488,7605,7657,7672, 34 0 0 0 1 2 0 0 + SGN-E333750 440 197 233 C04HBa0128G23.1 153634 32819 32853 2 5,29, 197,204, 32819,32824, 32 0 0 0 0 0 0 0 + SGN-E333993 355 124 156 C04HBa0128G23.1 153634 61115 61147 1 32, 124, 61115, 34 0 0 0 1 2 0 0 + SGN-E329384 534 122 158 C04HBa0128G23.1 153634 32819 32853 2 5,29, 122,129, 32819,32824, 39 0 0 0 1 9 1 14 + SGN-E331093 512 129 177 C04HBa0128G23.1 153634 32820 32873 2 31,8, 129,169, 32820,32865, 243 11 0 0 3 6 3 507 - SGN-E323375 522 262 522 C04HBa0128G23.1 153634 6915 7676 6 49,110,25,51,15,4, 0,49,162,187,240,256, 6915,7378,7488,7605,7657,7672, 384 15 0 1 4 8 6 552 - SGN-E328045 672 264 672 C04HBa0128G23.1 153634 6724 7676 9 6,18,33,138,110,25,51,15,4, 0,6,24,57,197,310,335,388,404, 6724,6731,6750,6824,7378,7488,7605,7657,7672, 257 11 0 0 3 6 3 507 - SGN-E323415 544 270 544 C04HBa0128G23.1 153634 6901 7676 6 63,110,25,51,15,4, 0,63,176,201,254,270, 6901,7378,7488,7605,7657,7672, 32 0 0 0 0 0 1 1 + SGN-E313683 492 238 270 C04HBa0128G23.1 153634 61114 61147 2 12,20, 238,250, 61114,61127, 296 12 0 0 4 8 3 509 - SGN-E315605 593 277 593 C04HBa0128G23.1 153634 6859 7676 6 103,110,25,51,15,4, 0,105,218,243,296,312, 6859,7378,7488,7605,7657,7672, 30 0 0 0 0 0 0 0 - SGN-E315196 611 3 33 C04HBa0128G23.1 153634 61119 61149 1 30, 578, 61119, 419 17 0 0 4 8 5 551 - SGN-E315706 708 264 708 C04HBa0128G23.1 153634 6689 7676 8 17,76,138,110,25,51,15,4, 0,17,93,233,346,371,424,440, 6689,6707,6824,7378,7488,7605,7657,7672, 622 25 0 0 3 6 6 740 - SGN-E317337 653 0 653 C04HBa0128G23.1 153634 6241 7628 8 19,234,102,3,131,110,25,23, 0,19,254,356,359,492,605,630, 6241,6369,6685,6797,6831,7378,7488,7605, 651 25 0 0 4 6 6 649 - SGN-E318068 702 0 682 C04HBa0128G23.1 153634 6144 7469 8 17,70,28,234,102,3,131,91, 20,39,110,138,373,475,478,611, 6144,6162,6232,6369,6685,6797,6831,7378, 388 16 0 0 5 9 5 550 - SGN-E318050 684 268 681 C04HBa0128G23.1 153634 6722 7676 9 10,34,5,150,110,25,51,15,4, 3,14,48,53,205,318,343,396,412, 6722,6732,6767,6812,7378,7488,7605,7657,7672, 664 25 0 1 6 11 8 740 - SGN-E342171 733 32 733 C04HBa0128G23.1 153634 6246 7676 12 14,149,44,43,101,3,131,110,25,51,15,4, 0,14,165,210,253,354,357,490,603,628,681,697, 6246,6369,6519,6563,6686,6797,6831,7378,7488,7605,7657,7672, 39 1 0 0 0 0 2 163 + SGN-E344360 505 465 505 C04HBa0128G23.1 153634 61103 61306 3 8,19,13, 465,473,492, 61103,61113,61293, 36 1 0 0 0 0 1 2 + SGN-E346969 664 494 531 C04HBa0128G23.1 153634 32812 32851 2 8,29, 494,502, 32812,32822, 215 7 0 0 0 0 1 109 - SGN-E339253 738 0 222 C04HBa0128G23.1 153634 6144 6475 2 116,106, 516,632, 6144,6369, 31 0 0 0 0 0 0 0 - SGN-E353350 487 437 468 C04HBa0128G23.1 153634 32825 32856 1 31, 19, 32825, 234 16 0 0 0 0 0 0 - SGN-E349661 693 443 693 C04HBa0128G23.1 153634 43277 43527 1 250, 0, 43277, 216 12 0 0 2 2 1 2 - SGN-E350950 673 443 673 C04HBa0128G23.1 153634 43297 43527 3 44,6,178, 0,45,52, 43297,43343,43349, 201 4 0 0 3 6 2 93 - SGN-E367111 483 250 461 C04HBa0128G23.1 153634 7378 7676 5 110,25,51,15,4, 22,135,160,213,229, 7378,7488,7605,7657,7672, 34 0 0 0 1 3 0 0 - SGN-E692368 629 409 446 C04HBa0128G23.1 153634 61114 61148 2 6,28, 183,192, 61114,61120, 38 2 0 0 0 0 0 0 - SGN-E356109 340 108 148 C04HBa0128G23.1 153634 39814 39854 1 40, 192, 39814,