psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1490 0 0 0 0 0 5 6321 - SGN-E745984 1508 0 1490 C04HBa0132O11.1 117561 34180 41991 6 475,418,110,145,279,63, 18,493,911,1021,1166,1445, 34180,34753,35420,39129,40751,41928, 741 5 0 0 2 2 5 446 - SGN-E555324 759 0 748 C04HBa0132O11.1 117561 115246 116438 8 47,88,93,118,179,170,46,5, 11,59,147,240,358,537,708,754, 115246,115293,115581,115771,115987,116168,116338,116433, 829 3 0 0 0 0 4 6225 - SGN-E689219 832 0 832 C04HBa0132O11.1 117561 35015 42072 5 156,110,145,277,144, 0,156,266,411,688, 35015,35420,39129,40751,41928, 84 0 0 0 0 0 0 0 - SGN-E577973 198 114 198 C04HBa0132O11.1 117561 82210 82294 1 84, 0, 82210, 728 2 0 0 1 1 7 4829 - SGN-E321498 752 21 752 C04HBa0132O11.1 117561 16557 22116 8 44,21,34,111,132,122,108,158, 0,45,66,100,211,343,465,573, 16557,16603,16625,16748,17073,20271,21268,21958, 509 1 0 0 1 1 1 1 + SGN-E323193 511 0 511 C04HBa0132O11.1 117561 64165 64676 3 489,9,12, 0,490,499, 64165,64654,64664, 559 1 0 0 0 0 0 0 + SGN-E323077 560 0 560 C04HBa0132O11.1 117561 64165 64725 1 560, 0, 64165, 434 1 0 0 0 0 0 0 + SGN-E323118 435 0 435 C04HBa0132O11.1 117561 64165 64600 1 435, 0, 64165, 370 27 0 0 1 13 1 1 + SGN-E323118 435 10 420 C04HBa0132O11.1 117561 102749 103147 2 7,390, 10,30, 102749,102757, 416 2 0 0 0 0 2 2377 - SGN-E378719 418 0 418 C04HBa0132O11.1 117561 39227 42022 3 47,277,94, 0,47,324, 39227,40751,41928, 708 3 0 0 0 0 3 3369 - SGN-E369393 711 0 711 C04HBa0132O11.1 117561 16297 20377 4 362,111,132,106, 0,362,473,605, 16297,16748,17073,20271, 118 0 0 0 0 0 1 1 - SGN-E377601 762 488 606 C04HBa0132O11.1 117561 82175 82294 2 37,81, 156,193, 82175,82213, 77 4 0 0 1 45 1 44 - SGN-E389654 590 452 578 C04HBa0132O11.1 117561 50567 50692 2 29,52, 12,86, 50567,50640, 65 1 0 0 2 11 1 36 + SGN-E396988 561 477 554 C04HBa0132O11.1 117561 67399 67501 3 32,22,12, 477,510,542, 67399,67431,67489, 32 0 0 0 0 0 0 0 + SGN-E396989 513 477 509 C04HBa0132O11.1 117561 67399 67431 1 32, 477, 67399, 44 3 0 0 0 0 0 0 + SGN-E539292 674 513 560 C04HBa0132O11.1 117561 18273 18320 1 47, 513, 18273, 163 2 0 0 1 1 2 3 - SGN-E539292 674 413 579 C04HBa0132O11.1 117561 50524 50692 4 8,11,74,72, 95,103,114,189, 50524,50534,50546,50620, 30 0 0 0 0 0 0 0 + SGN-E546052 673 81 111 C04HBa0132O11.1 117561 71126 71156 1 30, 81, 71126, 798 18 0 1 1 1 4 14383 + SGN-E546273 818 0 818 C04HBa0132O11.1 117561 49147 64347 5 208,105,325,36,143, 0,208,313,638,675, 49147,49356,63418,64125,64204, 709 42 0 1 4 38 6 27494 + SGN-E546273 818 28 818 C04HBa0132O11.1 117561 74663 102909 8 181,37,67,15,75,154,41,182, 28,209,246,338,354,429,593,636, 74663,74845,74883,102061,102076,102157,102312,102727, 785 11 0 0 4 34 3 147 + SGN-E546314 839 0 830 C04HBa0132O11.1 117561 65193 66136 8 433,162,22,48,6,57,32,36, 0,433,605,628,676,691,762,794, 65193,65769,65931,65953,66003,66009,66066,66100, 488 3 0 0 0 0 2 716 - SGN-E237933 491 0 491 C04HBa0132O11.1 117561 13540 14747 3 63,322,106, 0,63,385, 13540,14166,14641, 237 15 0 0 1 1 2 3281 - SGN-E242532 253 0 253 C04HBa0132O11.1 117561 16841 20374 3 18,133,101, 0,18,152, 16841,17073,20273, 840 0 0 0 0 0 1 98 - SGN-E726782 840 0 840 C04HBa0132O11.1 117561 34508 35446 2 147,693, 0,147, 34508,34753, 801 1 0 0 1 27 1 21 + SGN-E736849 829 0 829 C04HBa0132O11.1 117561 78637 79460 2 111,691, 0,138, 78637,78769, 35 0 0 0 0 0 0 0 - SGN-E736849 829 108 143 C04HBa0132O11.1 117561 78751 78786 1 35, 686, 78751, 52 2 0 0 1 309 1 312 + SGN-E699290 747 358 721 C04HBa0132O11.1 117561 77151 77517 2 30,24, 358,697, 77151,77493, 694 2 0 0 0 0 2 347 - SGN-E710824 696 0 696 C04HBa0132O11.1 117561 34462 35505 3 193,418,85, 0,193,611, 34462,34753,35420, 438 0 0 0 0 0 0 0 + SGN-E711962 451 0 438 C04HBa0132O11.1 117561 79168 79606 1 438, 0, 79168, 477 0 0 0 0 0 0 0 - SGN-E713859 541 1 478 C04HBa0132O11.1 117561 34178 34655 1 477, 63, 34178, 50 0 0 0 2 55 4 21 - SGN-E714315 717 28 133 C04HBa0132O11.1 117561 106248 106319 5 6,7,9,11,17, 584,590,597,612,672, 106248,106255,106274,106290,106302, 150 9 0 0 0 0 1 1 - SGN-E243215 460 80 239 C04HBa0132O11.1 117561 70150 70310 2 69,90, 221,290, 70150,70220, 101 5 0 0 0 0 0 0 - SGN-E251108 520 108 214 C04HBa0132O11.1 117561 87454 87560 1 106, 306, 87454, 655 2 0 0 0 0 3 847 - SGN-E255239 657 0 657 C04HBa0132O11.1 117561 13234 14738 4 128,110,322,97, 0,128,238,560, 13234,13493,14166,14641, 388 2 0 0 0 0 1 153 - SGN-E257882 390 0 390 C04HBa0132O11.1 117561 14195 14738 2 293,97, 0,293, 14195,14641, 560 2 0 0 0 0 3 847 - SGN-E256631 562 0 562 C04HBa0132O11.1 117561 13329 14738 4 33,110,322,97, 0,33,143,465, 13329,13493,14166,14641, 567 2 0 0 1 1 3 847 - SGN-E259216 570 0 570 C04HBa0132O11.1 117561 13322 14738 5 40,110,322,80,17, 0,40,150,472,553, 13322,13493,14166,14641,14721, 286 5 0 0 0 0 1 1477 - SGN-E261889 291 0 291 C04HBa0132O11.1 117561 39145 40913 2 129,162, 0,129, 39145,40751, 743 3 0 2 0 0 7 7046 - SGN-E262518 748 0 748 C04HBa0132O11.1 117561 16547 24341 8 50,33,111,132,122,108,156,36, 0,50,83,194,326,448,556,712, 16547,16598,16748,17073,20271,21268,21958,24305, 690 0 0 0 2 2 7 7046 - SGN-E262738 692 0 692 C04HBa0132O11.1 117561 16605 24341 10 26,24,5,81,29,103,122,108,156,36, 0,26,50,56,137,167,270,392,500,656, 16605,16748,16773,16778,17073,17102,20271,21268,21958,24305, 521 2 0 0 0 0 1 249 - SGN-E266793 523 0 523 C04HBa0132O11.1 117561 34752 35524 2 419,104, 0,419, 34752,35420, 604 2 0 0 0 0 3 847 - SGN-E274607 606 0 606 C04HBa0132O11.1 117561 13279 14732 4 83,110,322,91, 0,83,193,515, 13279,13493,14166,14641, 541 0 0 0 0 0 4 6714 - SGN-E273912 541 0 541 C04HBa0132O11.1 117561 17150 24405 5 55,122,108,156,100, 0,55,177,285,441, 17150,20271,21268,21958,24305, 96 3 0 0 1 1 0 0 - SGN-E284025 513 413 513 C04HBa0132O11.1 117561 50593 50692 2 27,72, 0,28, 50593,50620, 183 0 0 0 1 4 2 84 + SGN-E286084 187 0 187 C04HBa0132O11.1 117561 115096 115363 3 69,108,6, 0,69,181, 115096,115247,115357, 551 0 0 0 0 0 3 3648 - SGN-E293252 551 0 551 C04HBa0132O11.1 117561 20274 24473 4 119,108,156,168, 0,119,227,383, 20274,21268,21958,24305, 380 8 0 0 1 1 2 2378 - SGN-E324948 389 0 389 C04HBa0132O11.1 117561 39216 41982 3 58,277,53, 0,58,336, 39216,40751,41929, 456 1 0 0 0 0 1 2 + SGN-E325196 457 0 457 C04HBa0132O11.1 117561 112349 112808 2 249,208, 0,249, 112349,112600, 471 0 0 0 0 0 0 0 - SGN-E329013 598 0 471 C04HBa0132O11.1 117561 12876 13347 1 471, 127, 12876, 544 2 0 0 1 1 0 0 - SGN-E328833 547 0 547 C04HBa0132O11.1 117561 14199 14745 2 404,142, 0,405, 14199,14603, 481 2 0 0 0 0 0 0 + SGN-E324686 483 0 483 C04HBa0132O11.1 117561 64242 64725 1 483, 0, 64242, 377 1 0 0 0 0 1 2 + SGN-E313640 378 0 378 C04HBa0132O11.1 117561 112357 112737 2 241,137, 0,241, 112357,112600, 546 3 0 0 0 0 3 5976 - SGN-E310323 549 0 549 C04HBa0132O11.1 117561 35497 42022 4 33,145,277,94, 0,33,178,455, 35497,39129,40751,41928, 800 1 0 2 0 0 2 694 - SGN-E317332 803 0 803 C04HBa0132O11.1 117561 12965 14462 3 397,110,296, 0,397,507, 12965,13493,14166, 763 5 0 1 3 3 8 700 - SGN-E317333 772 0 772 C04HBa0132O11.1 117561 12993 14462 12 137,18,12,13,44,6,28,34,6,65,110,296, 0,137,155,167,181,225,232,260,294,301,366,476, 12993,13131,13150,13163,13176,13221,13227,13256,13291,13297,13493,14166, 620 0 0 0 0 0 0 0 + SGN-E318101 620 0 620 C04HBa0132O11.1 117561 64668 65288 1 620, 0, 64668, 357 2 0 0 0 0 2 7330 - SGN-E338756 359 0 359 C04HBa0132O11.1 117561 24409 32098 3 68,86,205, 0,68,154, 24409,26491,31893, 32 0 0 0 0 0 0 0 + SGN-E338817 469 433 465 C04HBa0132O11.1 117561 67399 67431 1 32, 433, 67399, 500 2 0 0 1 1 2 2378 - SGN-E337305 503 0 503 C04HBa0132O11.1 117561 39138 42018 3 134,278,90, 0,135,413, 39138,40750,41928, 489 1 0 0 0 0 5 641 + SGN-E342576 608 118 608 C04HBa0132O11.1 117561 114739 115870 6 30,121,13,134,93,99, 118,148,269,282,416,509, 114739,114886,115152,115247,115581,115771, 123 0 0 0 0 0 0 0 + SGN-E342576 608 0 123 C04HBa0132O11.1 117561 114966 115089 1 123, 0, 114966, 626 2 0 0 1 1 4 654 + SGN-E342345 640 0 629 C04HBa0132O11.1 117561 112363 113645 6 235,63,224,58,26,22, 0,235,299,523,581,607, 112363,112600,112663,113537,113596,113623, 427 0 0 0 0 0 1 143 + SGN-E352753 427 0 427 C04HBa0132O11.1 117561 65565 66135 2 61,366, 0,61, 65565,65769, 608 0 0 0 0 0 2 291 + SGN-E354560 608 0 608 C04HBa0132O11.1 117561 65398 66297 3 228,372,8, 0,228,600, 65398,65769,66289, 428 0 0 0 0 0 1 143 + SGN-E349703 459 0 428 C04HBa0132O11.1 117561 65565 66136 2 61,367, 0,61, 65565,65769, 489 3 0 0 0 0 0 0 + SGN-E367737 492 0 492 C04HBa0132O11.1 117561 64236 64728 1 492, 0, 64236, 394 18 0 0 4 15 4 22 + SGN-E362511 427 0 427 C04HBa0132O11.1 117561 112398 112832 6 57,14,5,80,21,235, 0,60,75,82,171,192, 112398,112459,112477,112482,112574,112597, 430 17 0 0 0 0 1 153 - SGN-E362436 473 26 473 C04HBa0132O11.1 117561 14136 14736 2 352,95, 0,352, 14136,14641, 30 0 0 0 0 0 0 0 + SGN-E357241 611 80 110 C04HBa0132O11.1 117561 71126 71156 1 30, 80, 71126, 460 13 0 0 0 0 2 13958 + SGN-E358683 473 0 473 C04HBa0132O11.1 117561 49148 63579 3 207,105,161, 0,207,312, 49148,49356,63418, 393 27 0 0 2 26 4 27119 + SGN-E358683 473 27 473 C04HBa0132O11.1 117561 74663 102202 6 181,37,67,15,75,45, 27,208,245,337,353,428, 74663,74845,74883,102061,102076,102157, 541 5 0 0 0 0 1 143 + SGN-E359265 546 0 546 C04HBa0132O11.1 117561 65102 65791 2 524,22, 0,524, 65102,65769,