psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 757 6 0 0 0 0 2 761 - SGN-E687670 763 0 763 C04HBa0138I19.1 112886 74370 75894 3 172,272,319, 0,172,444, 74370,74751,75575, 505 0 0 0 0 0 4 1557 - SGN-E688222 565 60 565 C04HBa0138I19.1 112886 110824 112886 5 103,60,204,122,16, 0,103,163,367,489, 110824,111778,112086,112468,112870, 39 3 0 0 0 0 0 0 + SGN-E203556 297 100 142 C04HBa0138I19.1 112886 29642 29684 1 42, 100, 29642, 495 6 0 1 1 1 1 599 + SGN-E205527 503 0 503 C04HBa0138I19.1 112886 28612 29713 2 341,161, 0,342, 28612,29552, 739 1 0 0 0 0 4 4017 + SGN-E212364 740 0 740 C04HBa0138I19.1 112886 66844 71601 5 93,177,99,243,128, 0,93,270,369,612, 66844,69046,69664,70113,71473, 545 2 0 0 0 0 0 0 - SGN-E319199 547 0 547 C04HBa0138I19.1 112886 67106 67653 1 547, 0, 67106, 524 0 0 0 0 0 0 0 - SGN-E320402 554 30 554 C04HBa0138I19.1 112886 32357 32881 1 524, 0, 32357, 560 0 0 0 0 0 3 1949 + SGN-E322211 560 0 560 C04HBa0138I19.1 112886 66633 69142 4 304,35,125,96, 0,304,339,464, 66633,68487,68849,69046, 738 3 0 0 1 6 5 98 - SGN-E322689 747 0 747 C04HBa0138I19.1 112886 91214 92053 6 21,40,15,326,328,11, 0,21,61,82,408,736, 91214,91236,91279,91299,91713,92042, 630 4 0 1 0 0 6 2167 - SGN-E320702 635 0 635 C04HBa0138I19.1 112886 15075 17877 7 96,74,113,79,51,123,99, 0,96,170,283,362,413,536, 15075,15412,15564,15808,17009,17166,17778, 454 0 0 0 0 0 1 552 - SGN-E323140 454 0 454 C04HBa0138I19.1 112886 74887 75893 2 136,318, 0,136, 74887,75575, 524 1 0 0 0 0 2 1984 + SGN-E322034 525 0 525 C04HBa0138I19.1 112886 66655 69164 3 282,125,118, 0,282,407, 66655,68849,69046, 282 2 0 1 0 0 0 0 - SGN-E378329 297 12 297 C04HBa0138I19.1 112886 91773 92058 1 285, 0, 91773, 42 2 0 0 0 0 0 0 - SGN-E372533 634 450 494 C04HBa0138I19.1 112886 74460 74504 1 44, 140, 74460, 632 16 0 0 0 0 2 91 + SGN-E372748 669 21 669 C04HBa0138I19.1 112886 91235 91974 3 27,360,261, 21,48,408, 91235,91265,91713, 702 1 0 0 0 0 0 0 + SGN-E375994 712 0 703 C04HBa0138I19.1 112886 71345 72048 1 703, 0, 71345, 656 0 0 0 0 0 1 1 + SGN-E375995 656 0 656 C04HBa0138I19.1 112886 70716 71373 2 388,268, 0,388, 70716,71105, 350 1 0 0 0 0 0 0 + SGN-E376062 361 1 352 C04HBa0138I19.1 112886 71697 72048 1 351, 1, 71697, 590 0 0 0 0 0 1 1 + SGN-E376063 590 0 590 C04HBa0138I19.1 112886 70716 71307 2 388,202, 0,388, 70716,71105, 684 0 0 0 0 0 0 0 + SGN-E376083 693 0 684 C04HBa0138I19.1 112886 71364 72048 1 684, 0, 71364, 653 2 0 0 0 0 1 1 + SGN-E376084 655 0 655 C04HBa0138I19.1 112886 70716 71372 2 388,267, 0,388, 70716,71105, 610 1 0 0 0 0 1 88 - SGN-E390700 611 0 611 C04HBa0138I19.1 112886 91368 92067 2 257,354, 0,257, 91368,91713, 593 6 0 0 0 0 2 91 - SGN-E390947 604 0 599 C04HBa0138I19.1 112886 91235 91925 3 27,360,212, 5,32,392, 91235,91265,91713, 701 14 0 0 0 0 2 91 - SGN-E397724 720 0 715 C04HBa0138I19.1 112886 91235 92041 3 27,360,328, 5,32,392, 91235,91265,91713, 549 0 0 0 0 0 1 88 - SGN-E397725 549 0 549 C04HBa0138I19.1 112886 91430 92067 2 195,354, 0,195, 91430,91713, 594 9 0 0 1 1 1 2 + SGN-E547033 642 0 604 C04HBa0138I19.1 112886 32276 32881 2 416,187, 0,417, 32276,32694, 682 7 0 1 2 8 5 621 + SGN-E547034 698 0 698 C04HBa0138I19.1 112886 28424 29735 6 34,10,31,14,418,183, 0,39,52,83,97,515, 28424,28467,28483,28515,28536,29552, 504 0 0 0 0 0 4 1557 - SGN-E550595 564 60 564 C04HBa0138I19.1 112886 110825 112886 5 102,60,204,122,16, 0,102,162,366,488, 110825,111778,112086,112468,112870, 395 0 0 0 0 0 4 833 - SGN-E239524 395 0 395 C04HBa0138I19.1 112886 72551 73779 5 33,54,120,102,86, 0,33,87,207,309, 72551,72668,73296,73506,73693, 575 0 0 0 0 0 3 1908 + SGN-E242033 575 0 575 C04HBa0138I19.1 112886 69116 71599 4 107,99,243,126, 0,107,206,449, 69116,69664,70113,71473, 426 0 0 0 0 0 2 1467 + SGN-E242873 426 0 426 C04HBa0138I19.1 112886 69674 71567 3 89,243,94, 0,89,332, 69674,70113,71473, 473 1 0 0 0 0 2 1467 + SGN-E240093 474 0 474 C04HBa0138I19.1 112886 69674 71615 3 89,243,142, 0,89,332, 69674,70113,71473, 629 0 0 0 0 0 2 319 - SGN-E727371 634 5 634 C04HBa0138I19.1 112886 90993 91941 3 7,394,228, 0,7,401, 90993,91231,91713, 799 1 0 1 0 0 1 88 - SGN-E728350 801 0 801 C04HBa0138I19.1 112886 91152 92041 2 473,328, 0,473, 91152,91713, 150 0 0 0 0 0 0 0 + SGN-E731059 813 11 161 C04HBa0138I19.1 112886 91884 92034 1 150, 11, 91884, 653 3 0 0 1 1 1 88 - SGN-E731059 813 156 813 C04HBa0138I19.1 112886 91142 91886 3 16,467,173, 0,17,484, 91142,91158,91713, 839 1 0 1 0 0 1 88 - SGN-E731316 842 1 842 C04HBa0138I19.1 112886 91127 92056 2 498,343, 0,498, 91127,91713, 711 0 0 0 0 0 1 88 - SGN-E722560 726 10 721 C04HBa0138I19.1 112886 91293 92092 2 332,379, 5,337, 91293,91713, 901 1 0 0 1 1 2 89 - SGN-E722780 903 0 903 C04HBa0138I19.1 112886 91101 92092 4 76,62,385,379, 0,76,139,524, 91101,91178,91240,91713, 502 0 0 0 0 0 1 88 - SGN-E732563 515 0 502 C04HBa0138I19.1 112886 91231 91821 2 394,108, 13,407, 91231,91713, 697 0 0 1 0 0 1 88 - SGN-E733293 719 4 702 C04HBa0138I19.1 112886 91255 92041 2 370,328, 17,387, 91255,91713, 785 1 0 0 0 0 1 88 - SGN-E733341 786 0 786 C04HBa0138I19.1 112886 91241 92115 2 384,402, 0,384, 91241,91713, 553 0 0 1 0 0 1 88 - SGN-E733806 566 0 554 C04HBa0138I19.1 112886 91235 91877 2 390,164, 12,402, 91235,91713, 872 1 0 0 0 0 1 88 - SGN-E733808 884 0 873 C04HBa0138I19.1 112886 91095 92056 2 530,343, 11,541, 91095,91713, 869 4 0 0 0 0 1 88 - SGN-E733809 883 0 873 C04HBa0138I19.1 112886 91095 92056 2 530,343, 10,540, 91095,91713, 880 0 0 0 0 0 1 88 - SGN-E734335 889 0 880 C04HBa0138I19.1 112886 91098 92066 2 527,353, 9,536, 91098,91713, 459 0 0 0 0 0 0 0 - SGN-E734430 477 0 459 C04HBa0138I19.1 112886 91158 91617 1 459, 18, 91158, 553 0 0 0 1 2 2 89 - SGN-E734760 566 0 555 C04HBa0138I19.1 112886 91235 91877 3 5,384,164, 11,18,402, 91235,91241,91713, 734 0 0 0 0 0 1 88 - SGN-E735120 747 0 734 C04HBa0138I19.1 112886 91235 92057 2 390,344, 13,403, 91235,91713, 865 0 0 0 0 0 0 0 - SGN-E738022 867 1 866 C04HBa0138I19.1 112886 108995 109860 1 865, 1, 108995, 884 0 0 0 1 1 0 0 - SGN-E740594 885 0 885 C04HBa0138I19.1 112886 108977 109861 2 32,852, 0,33, 108977,109009, 798 2 0 0 0 0 1 86 + SGN-E697454 800 0 800 C04HBa0138I19.1 112886 40166 41052 2 429,371, 0,429, 40166,40681, 743 4 0 0 2 2 5 3814 - SGN-E698732 754 5 754 C04HBa0138I19.1 112886 107642 112203 8 14,25,42,231,119,139,60,117, 0,15,41,83,314,433,572,632, 107642,107656,107681,108665,110069,110788,111778,112086, 845 1 0 0 0 0 1 86 + SGN-E705771 855 0 846 C04HBa0138I19.1 112886 40477 41409 2 118,728, 0,118, 40477,40681, 883 0 0 0 0 0 1 88 - SGN-E706483 901 0 883 C04HBa0138I19.1 112886 91099 92070 2 526,357, 18,544, 91099,91713, 769 6 0 0 0 0 5 4252 - SGN-E708780 778 3 778 C04HBa0138I19.1 112886 351 5378 6 86,135,87,168,157,142, 0,86,221,308,476,633, 351,516,3854,4036,4296,5236, 773 0 0 0 0 0 1 88 - SGN-E711159 777 4 777 C04HBa0138I19.1 112886 91200 92061 2 425,348, 0,425, 91200,91713, 877 0 0 0 0 0 1 88 - SGN-E713092 877 0 877 C04HBa0138I19.1 112886 91104 92069 2 521,356, 0,521, 91104,91713, 872 0 0 0 0 0 1 88 - SGN-E713958 883 0 872 C04HBa0138I19.1 112886 91098 92058 2 527,345, 11,538, 91098,91713, 721 1 0 0 0 0 1 88 - SGN-E715952 722 0 722 C04HBa0138I19.1 112886 91241 92051 2 384,338, 0,384, 91241,91713, 721 0 0 0 0 0 1 88 - SGN-E717003 721 0 721 C04HBa0138I19.1 112886 91243 92052 2 382,339, 0,382, 91243,91713, 137 6 0 0 0 0 1 1 - SGN-E243215 460 80 223 C04HBa0138I19.1 112886 97955 98099 2 53,90, 237,290, 97955,98009, 474 14 0 0 0 0 1 88 - SGN-E245959 488 0 488 C04HBa0138I19.1 112886 91421 91997 2 204,284, 0,204, 91421,91713, 447 1 0 0 0 0 1 88 - SGN-E245883 448 0 448 C04HBa0138I19.1 112886 91461 91997 2 164,284, 0,164, 91461,91713, 510 1 0 0 0 0 1 552 - SGN-E256451 511 0 511 C04HBa0138I19.1 112886 74828 75891 2 195,316, 0,195, 74828,75575, 597 0 0 0 0 0 2 872 - SGN-E256574 597 0 597 C04HBa0138I19.1 112886 74422 75891 3 7,274,316, 0,7,281, 74422,74749,75575, 764 1 0 0 0 0 3 1731 - SGN-E257183 765 0 765 C04HBa0138I19.1 112886 220 2716 4 26,111,135,493, 0,26,137,272, 220,326,516,2223, 71 0 0 0 1 3 1 4 - SGN-E263461 422 0 74 C04HBa0138I19.1 112886 2641 2716 2 8,63, 348,359, 2641,2653, 458 0 0 0 0 0 1 86 + SGN-E266110 458 0 458 C04HBa0138I19.1 112886 40185 40729 2 410,48, 0,410, 40185,40681, 248 4 0 0 0 0 2 595 + SGN-E216738 256 4 256 C04HBa0138I19.1 112886 17009 17856 3 51,123,78, 4,55,178, 17009,17166,17778, 477 0 0 0 0 0 2 218 - SGN-E216639 495 0 477 C04HBa0138I19.1 112886 11799 12494 3 374,89,14, 18,392,481, 11799,12276,12480, 475 0 0 0 0 0 2 91 - SGN-E217238 489 0 475 C04HBa0138I19.1 112886 91231 91797 3 31,360,84, 14,45,405, 91231,91265,91713, 385 2 0 0 0 0 1 3 - SGN-E228874 401 0 387 C04HBa0138I19.1 112886 91231 91621 2 31,356, 14,45, 91231,91265, 416 1 0 0 0 0 2 91 - SGN-E228970 430 0 417 C04HBa0138I19.1 112886 91235 91743 3 27,360,30, 13,40,400, 91235,91265,91713, 381 0 0 0 4 5 1 3 - SGN-E228620 398 0 386 C04HBa0138I19.1 112886 91235 91619 6 27,250,10,19,44,31, 12,39,290,302,322,367, 91235,91265,91515,91525,91544,91588, 380 1 0 0 0 0 1 3 - SGN-E227360 393 0 381 C04HBa0138I19.1 112886 91235 91619 2 27,354, 12,39, 91235,91265, 370 0 0 0 0 0 1 3 - SGN-E227579 382 0 370 C04HBa0138I19.1 112886 91235 91608 2 27,343, 12,39, 91235,91265, 411 2 0 0 1 1 2 4 - SGN-E229895 414 0 414 C04HBa0138I19.1 112886 91051 91468 4 17,207,79,110, 0,17,224,304, 91051,91069,91279,91358, 432 0 0 0 0 0 4 1557 - SGN-E269326 496 64 496 C04HBa0138I19.1 112886 110897 112886 5 30,60,204,122,16, 0,30,90,294,416, 110897,111778,112086,112468,112870, 416 8 0 0 0 0 0 0 + SGN-E272695 424 0 424 C04HBa0138I19.1 112886 40013 40437 1 424, 0, 40013, 437 1 0 0 0 0 1 918 + SGN-E272952 438 0 438 C04HBa0138I19.1 112886 35228 36584 2 334,104, 0,334, 35228,36480, 466 11 0 0 1 1 1 918 + SGN-E272878 479 1 479 C04HBa0138I19.1 112886 35227 36622 3 46,289,142, 1,48,337, 35227,35273,36480, 557 1 0 0 0 0 0 0 + SGN-E270007 558 0 558 C04HBa0138I19.1 112886 59843 60401 1 558, 0, 59843, 469 0 0 0 0 0 1 88 - SGN-E282830 469 0 469 C04HBa0138I19.1 112886 91509 92066 2 116,353, 0,116, 91509,91713, 378 0 0 0 0 0 1 3 + SGN-E282942 383 5 383 C04HBa0138I19.1 112886 91079 91460 2 197,181, 5,202, 91079,91279, 474 0 0 0 0 0 0 0 - SGN-E288354 483 0 474 C04HBa0138I19.1 112886 91149 91623 1 474, 9, 91149, 419 0 0 0 0 0 3 2153 + SGN-E284634 419 0 419 C04HBa0138I19.1 112886 66827 69399 4 110,125,178,6, 0,110,235,413, 66827,68849,69046,69393, 460 0 0 0 0 0 2 91 + SGN-E292939 485 25 485 C04HBa0138I19.1 112886 91235 91786 3 27,360,73, 25,52,412, 91235,91265,91713, 419 0 0 0 0 0 1 88 - SGN-E295738 419 0 419 C04HBa0138I19.1 112886 91549 92056 2 76,343, 0,76, 91549,91713, 578 1 0 0 0 0 1 88 - SGN-E298357 579 0 579 C04HBa0138I19.1 112886 91388 92055 2 237,342, 0,237, 91388,91713, 42 2 0 0 0 0 0 0 - SGN-E298655 586 450 494 C04HBa0138I19.1 112886 74460 74504 1 44, 92, 74460, 404 0 0 0 0 0 1 88 - SGN-E289908 404 0 404 C04HBa0138I19.1 112886 91564 92056 2 61,343, 0,61, 91564,91713, 42 2 0 0 0 0 0 0 - SGN-E300191 521 354 398 C04HBa0138I19.1 112886 74460 74504 1 44, 123, 74460, 294 1 0 0 1 6 1 3 - SGN-E308374 319 0 301 C04HBa0138I19.1 112886 91233 91531 3 9,20,266, 18,33,53, 91233,91242,91265, 548 0 0 0 1 1 0 0 - SGN-E330840 549 0 549 C04HBa0138I19.1 112886 4553 5101 2 511,37, 0,512, 4553,5064, 490 0 0 0 0 0 2 187 - SGN-E329765 490 0 490 C04HBa0138I19.1 112886 3679 4356 3 262,168,60, 0,262,430, 3679,4036,4296, 464 0 0 0 0 0 1 552 - SGN-E331043 464 0 464 C04HBa0138I19.1 112886 74887 75903 2 136,328, 0,136, 74887,75575, 657 0 0 0 0 0 1 88 - SGN-E328848 657 0 657 C04HBa0138I19.1 112886 91396 92141 2 229,428, 0,229, 91396,91713, 519 3 0 0 0 0 1 1 + SGN-E324028 531 0 522 C04HBa0138I19.1 112886 41043 41566 2 413,109, 0,413, 41043,41457, 524 0 0 0 0 0 1 1 + SGN-E323438 524 0 524 C04HBa0138I19.1 112886 70716 71241 2 388,136, 0,388, 70716,71105, 528 1 0 0 0 0 3 2425 + SGN-E323453 529 0 529 C04HBa0138I19.1 112886 66718 69672 4 219,125,177,8, 0,219,344,521, 66718,68849,69046,69664, 569 2 0 0 0 0 0 0 + SGN-E324821 571 0 571 C04HBa0138I19.1 112886 70607 71178 1 571, 0, 70607, 496 1 0 0 0 0 1 88 - SGN-E313962 497 0 497 C04HBa0138I19.1 112886 91564 92149 2 61,436, 0,61, 91564,91713, 431 0 0 0 0 0 0 0 + SGN-E309545 431 0 431 C04HBa0138I19.1 112886 61095 61526 1 431, 0, 61095, 403 0 0 0 0 0 3 2425 + SGN-E335304 403 0 403 C04HBa0138I19.1 112886 66874 69702 4 63,125,177,38, 0,63,188,365, 66874,68849,69046,69664, 378 14 0 0 1 1 3 2426 + SGN-E335179 393 0 393 C04HBa0138I19.1 112886 66873 69691 4 63,125,177,27, 0,64,189,366, 66873,68849,69046,69664, 523 0 0 0 1 1 1 1027 + SGN-E341380 524 0 524 C04HBa0138I19.1 112886 70392 71942 2 34,489, 0,35, 70392,71453, 546 0 0 0 0 0 1 88 - SGN-E347142 546 0 546 C04HBa0138I19.1 112886 91456 92090 2 169,377, 0,169, 91456,91713, 400 0 0 0 0 0 0 0 + SGN-E348044 422 9 409 C04HBa0138I19.1 112886 71646 72046 1 400, 9, 71646, 615 0 0 0 2 2 4 2426 + SGN-E341862 631 0 617 C04HBa0138I19.1 112886 66722 69763 7 18,196,125,177,71,16,12, 0,18,214,339,516,588,605, 66722,66741,68849,69046,69664,69735,69751, 639 3 0 2 2 2 1 88 - SGN-E341829 646 0 646 C04HBa0138I19.1 112886 91316 92048 4 59,15,235,335, 0,60,76,311, 91316,91375,91390,91713, 455 14 0 0 0 0 2 2 - SGN-E365326 469 0 469 C04HBa0138I19.1 112886 3282 3753 3 122,191,156, 0,122,313, 3282,3405,3597, 492 8 0 0 0 0 0 0 + SGN-E367107 500 0 500 C04HBa0138I19.1 112886 40024 40524 1 500, 0, 40024, 386 5 0 0 2 8 4 23 + SGN-E361410 399 0 399 C04HBa0138I19.1 112886 28425 28839 5 33,10,31,14,303, 0,38,51,82,96, 28425,28467,28483,28515,28536, 502 11 0 0 0 0 3 748 - SGN-E689539 527 4 517 C04HBa0138I19.1 112886 72285 73546 4 299,54,120,40, 10,309,363,483, 72285,72668,73296,73506, 402 28 0 0 1 37 4 780 - SGN-E693379 467 0 467 C04HBa0138I19.1 112886 72336 73546 5 17,199,54,120,40, 0,54,253,307,427, 72336,72385,72668,73296,73506, 381 9 0 0 0 0 2 658 - SGN-E690683 429 28 418 C04HBa0138I19.1 112886 72282 73330 3 302,54,34, 11,313,367, 72282,72668,73296, 372 18 0 0 0 0 2 658 - SGN-E694523 428 24 414 C04HBa0138I19.1 112886 72282 73330 3 302,54,34, 14,316,370, 72282,72668,73296,