psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 2853 0 0 0 0 0 4 2227 - SGN-E747558 2868 0 2853 C04HBa0178P03.1 80343 940 6020 5 471,797,707,219,659, 15,486,1283,1990,2209, 940,1865,3260,4528,5361, 921 7 0 0 0 0 1 840 - SGN-E746643 941 0 928 C04HBa0178P03.1 80343 68394 70162 2 282,646, 13,295, 68394,69516, 433 0 0 0 0 0 0 0 - SGN-E746755 448 0 433 C04HBa0178P03.1 80343 5284 5717 1 433, 15, 5284, 581 2 0 0 0 0 0 0 - SGN-E688227 583 0 583 C04HBa0178P03.1 80343 64761 65344 1 583, 0, 64761, 579 2 0 0 0 0 0 0 - SGN-E688228 581 0 581 C04HBa0178P03.1 80343 64784 65365 1 581, 0, 64784, 558 1 0 0 0 0 2 113 + SGN-E688776 559 0 559 C04HBa0178P03.1 80343 36847 37519 3 5,75,479, 0,5,80, 36847,36853,37040, 437 0 0 1 0 0 1 87 - SGN-E203651 438 0 438 C04HBa0178P03.1 80343 43073 43598 2 110,328, 0,110, 43073,43270, 429 1 0 0 0 0 1 87 - SGN-E200067 430 0 430 C04HBa0178P03.1 80343 43119 43636 2 64,366, 0,64, 43119,43270, 42 2 0 0 0 0 0 0 + SGN-E577880 431 265 309 C04HBa0178P03.1 80343 14818 14862 1 44, 265, 14818, 737 0 0 0 0 0 1 3908 - SGN-E321858 737 0 737 C04HBa0178P03.1 80343 47781 52426 2 199,538, 0,199, 47781,51888, 580 0 0 0 0 0 1 3908 - SGN-E321995 580 0 580 C04HBa0178P03.1 80343 47938 52426 2 42,538, 0,42, 47938,51888, 430 11 0 0 0 0 0 0 - SGN-E310774 498 0 441 C04HBa0178P03.1 80343 68244 68685 1 441, 57, 68244, 177 2 0 0 0 0 0 0 - SGN-E310943 179 0 179 C04HBa0178P03.1 80343 69808 69987 1 179, 0, 69808, 727 0 0 0 0 0 2 406 - SGN-E378926 727 0 727 C04HBa0178P03.1 80343 42508 43641 3 215,141,371, 0,215,356, 42508,43042,43270, 721 3 0 0 0 0 3 533 - SGN-E379406 724 0 724 C04HBa0178P03.1 80343 38044 39301 4 445,67,81,131, 0,445,512,593, 38044,38569,38815,39170, 719 6 0 0 0 0 1 840 - SGN-E370668 732 0 725 C04HBa0178P03.1 80343 68394 69959 2 282,443, 7,289, 68394,69516, 673 3 0 0 0 0 1 840 - SGN-E370669 676 0 676 C04HBa0178P03.1 80343 68646 70162 2 30,646, 0,30, 68646,69516, 433 0 0 0 0 0 0 0 - SGN-E374086 443 0 433 C04HBa0178P03.1 80343 5284 5717 1 433, 10, 5284, 432 0 0 0 0 0 0 0 - SGN-E374087 443 0 432 C04HBa0178P03.1 80343 5284 5716 1 432, 11, 5284, 579 2 0 0 0 0 0 0 - SGN-E550593 581 0 581 C04HBa0178P03.1 80343 64784 65365 1 581, 0, 64784, 558 1 0 0 0 0 2 113 + SGN-E551005 559 0 559 C04HBa0178P03.1 80343 36847 37519 3 5,75,479, 0,5,80, 36847,36853,37040, 581 2 0 0 0 0 0 0 - SGN-E551393 583 0 583 C04HBa0178P03.1 80343 64761 65344 1 583, 0, 64761, 495 1 0 1 0 0 0 0 - SGN-E726049 497 0 497 C04HBa0178P03.1 80343 69588 70085 1 497, 0, 69588, 868 0 0 0 0 0 1 840 - SGN-E727773 872 4 872 C04HBa0178P03.1 80343 68454 70162 2 222,646, 0,222, 68454,69516, 707 0 0 0 0 0 1 840 - SGN-E727822 707 0 707 C04HBa0178P03.1 80343 68538 70085 2 138,569, 0,138, 68538,69516, 790 1 0 0 0 0 1 840 - SGN-E728113 794 3 794 C04HBa0178P03.1 80343 68482 70113 2 194,597, 0,194, 68482,69516, 761 3 0 0 0 0 3 2205 - SGN-E721907 784 20 784 C04HBa0178P03.1 80343 40643 43612 4 56,225,141,342, 0,56,281,422, 40643,42498,43042,43270, 842 0 0 0 0 0 3 2205 - SGN-E721993 856 14 856 C04HBa0178P03.1 80343 40565 43612 4 134,225,141,342, 0,134,359,500, 40565,42498,43042,43270, 637 7 0 0 0 0 1 112 + SGN-E722638 719 14 658 C04HBa0178P03.1 80343 36827 37583 2 101,543, 14,115, 36827,37040, 859 0 0 0 1 1 1 840 - SGN-E722729 863 3 863 C04HBa0178P03.1 80343 68403 70102 3 273,569,17, 0,273,843, 68403,69516,70085, 775 2 0 0 0 0 1 840 - SGN-E724470 777 0 777 C04HBa0178P03.1 80343 68564 70181 2 112,665, 0,112, 68564,69516, 880 2 0 1 1 1 7 4330 - SGN-E698828 884 0 884 C04HBa0178P03.1 80343 38615 43828 8 20,81,137,208,225,141,66,5, 0,21,102,239,447,672,813,879, 38615,38815,39170,40491,42498,43042,43270,43823, 886 1 0 0 0 0 1 454 - SGN-E701922 887 0 887 C04HBa0178P03.1 80343 1178 2519 2 233,654, 0,233, 1178,1865, 939 1 0 1 0 0 2 599 - SGN-E702204 941 0 941 C04HBa0178P03.1 80343 2089 3629 3 90,482,369, 0,90,572, 2089,2180,3260, 835 2 0 1 0 0 3 2205 - SGN-E703912 838 0 838 C04HBa0178P03.1 80343 40558 43601 4 141,225,141,331, 0,141,366,507, 40558,42498,43042,43270, 802 1 0 0 0 0 1 598 - SGN-E704480 809 6 809 C04HBa0178P03.1 80343 2113 3514 2 549,254, 0,549, 2113,3260, 813 0 0 0 0 0 1 840 - SGN-E704605 813 0 813 C04HBa0178P03.1 80343 68422 70075 2 254,559, 0,254, 68422,69516, 887 3 0 0 0 0 1 840 - SGN-E704635 890 0 890 C04HBa0178P03.1 80343 68353 70083 2 323,567, 0,323, 68353,69516, 767 0 0 0 1 1 1 583 - SGN-E705263 768 0 768 C04HBa0178P03.1 80343 64030 65380 2 121,646, 0,122, 64030,64734, 857 2 0 0 0 0 1 840 - SGN-E705653 859 0 859 C04HBa0178P03.1 80343 68387 70086 2 289,570, 0,289, 68387,69516, 496 4 0 0 0 0 2 841 - SGN-E247397 500 0 500 C04HBa0178P03.1 80343 68568 69909 3 108,196,196, 0,108,304, 68568,69516,69713, 480 1 0 0 0 0 2 406 - SGN-E248255 481 0 481 C04HBa0178P03.1 80343 42713 43600 3 10,141,330, 0,10,151, 42713,43042,43270, 273 0 0 0 0 0 0 0 - SGN-E249653 273 0 273 C04HBa0178P03.1 80343 39984 40257 1 273, 0, 39984, 517 2 0 0 0 0 0 0 - SGN-E253397 519 0 519 C04HBa0178P03.1 80343 69593 70112 1 519, 0, 69593, 37 0 0 0 0 0 0 0 - SGN-E256116 551 23 60 C04HBa0178P03.1 80343 37547 37584 1 37, 491, 37547, 622 1 0 0 0 0 1 112 + SGN-E257165 623 0 623 C04HBa0178P03.1 80343 36848 37583 2 80,543, 0,80, 36848,37040, 568 1 0 0 0 0 1 454 - SGN-E259850 569 0 569 C04HBa0178P03.1 80343 1039 2062 2 372,197, 0,372, 1039,1865, 37 0 0 0 0 0 0 0 - SGN-E260293 489 23 60 C04HBa0178P03.1 80343 37547 37584 1 37, 429, 37547, 317 14 0 0 2 3 2 3 - SGN-E217520 362 0 334 C04HBa0178P03.1 80343 68192 68526 3 9,34,288, 28,39,74, 68192,68202,68238, 372 8 0 0 0 0 0 0 + SGN-E280768 395 0 380 C04HBa0178P03.1 80343 69713 70093 1 380, 0, 69713, 529 2 0 0 0 0 0 0 - SGN-E272348 531 0 531 C04HBa0178P03.1 80343 64833 65364 1 531, 0, 64833, 490 3 0 0 0 0 0 0 - SGN-E271414 493 0 493 C04HBa0178P03.1 80343 69669 70162 1 493, 0, 69669, 553 0 0 0 0 0 3 3302 - SGN-E275134 553 0 553 C04HBa0178P03.1 80343 39247 43102 4 60,208,225,60, 0,60,268,493, 39247,40491,42498,43042, 398 2 0 0 0 0 0 0 - SGN-E279590 400 0 400 C04HBa0178P03.1 80343 69671 70071 1 400, 0, 69671, 489 0 0 0 0 0 1 454 - SGN-E279955 489 0 489 C04HBa0178P03.1 80343 1360 2303 2 51,438, 0,51, 1360,1865, 176 0 0 0 0 0 0 0 - SGN-E288984 185 0 176 C04HBa0178P03.1 80343 68230 68406 1 176, 9, 68230, 374 25 0 0 0 0 0 0 - SGN-E293279 399 0 399 C04HBa0178P03.1 80343 69683 70082 1 399, 0, 69683, 431 1 0 0 0 0 1 58 - SGN-E300528 443 0 432 C04HBa0178P03.1 80343 5284 5774 2 426,6, 11,437, 5284,5768, 608 0 0 0 0 0 2 406 - SGN-E301804 608 0 608 C04HBa0178P03.1 80343 42616 43630 3 107,141,360, 0,107,248, 42616,43042,43270, 404 1 0 0 0 0 1 840 - SGN-E305697 405 0 405 C04HBa0178P03.1 80343 68599 69844 2 77,328, 0,77, 68599,69516, 553 2 0 0 0 0 1 1 - SGN-E307202 555 0 555 C04HBa0178P03.1 80343 69539 70095 2 233,322, 0,233, 69539,69773, 566 0 0 0 0 0 1 1856 - SGN-E324361 566 0 566 C04HBa0178P03.1 80343 45474 47896 2 346,220, 0,346, 45474,47676, 309 0 0 0 0 0 0 0 - SGN-E313312 309 0 309 C04HBa0178P03.1 80343 52132 52441 1 309, 0, 52132, 649 2 0 0 0 0 2 1074 - SGN-E312327 651 0 651 C04HBa0178P03.1 80343 4717 6442 3 30,614,7, 0,30,644, 4717,5361,6435, 276 3 0 0 0 0 0 0 - SGN-E337477 279 0 279 C04HBa0178P03.1 80343 5647 5926 1 279, 0, 5647, 625 2 0 1 0 0 1 840 - SGN-E344127 628 0 628 C04HBa0178P03.1 80343 68648 70116 2 28,600, 0,28, 68648,69516, 677 2 0 0 0 0 1 840 - SGN-E347810 679 0 679 C04HBa0178P03.1 80343 68600 70119 2 76,603, 0,76, 68600,69516, 414 4 0 0 0 0 1 840 - SGN-E353173 426 0 418 C04HBa0178P03.1 80343 68394 69652 2 282,136, 8,290, 68394,69516, 654 20 0 1 1 4 1 6 - SGN-E353198 679 0 679 C04HBa0178P03.1 80343 68245 68926 3 552,106,17, 0,556,662, 68245,68797,68909, 414 4 0 0 0 0 1 840 - SGN-E355118 426 0 418 C04HBa0178P03.1 80343 68394 69652 2 282,136, 8,290, 68394,69516, 354 9 0 1 2 8 1 3 - SGN-E357067 376 4 376 C04HBa0178P03.1 80343 68536 68903 3 261,61,42, 0,265,330, 68536,68797,68861, 414 4 0 0 0 0 1 840 - SGN-E350629 426 0 418 C04HBa0178P03.1 80343 68394 69652 2 282,136, 8,290, 68394,69516, 621 10 0 0 0 0 3 533 - SGN-E362636 631 0 631 C04HBa0178P03.1 80343 38131 39295 4 358,67,81,125, 0,358,425,506, 38131,38569,38815,39170, 42 1 0 0 0 0 0 0 - SGN-E364287 309 49 92 C04HBa0178P03.1 80343 69612 69655 1 43, 217, 69612,