psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 34 0 0 0 0 0 0 0 + SGN-E747703 1222 1112 1146 C04HBa0198L24.1 160432 24433 24467 1 34, 1112, 24433, 32 1 0 0 0 0 0 0 - SGN-E747697 426 190 223 C04HBa0198L24.1 160432 41343 41376 1 33, 203, 41343, 931 0 0 0 0 0 5 5483 - SGN-E746760 946 0 931 C04HBa0198L24.1 160432 121455 127869 6 344,82,85,89,75,256, 15,359,441,526,615,690, 121455,122817,123481,125253,126631,127613, 1752 0 0 0 0 0 1 1107 - SGN-E747392 1762 0 1752 C04HBa0198L24.1 160432 66633 69492 2 1264,488, 10,1274, 66633,69004, 41 0 0 0 0 0 0 0 - SGN-E745449 1351 456 497 C04HBa0198L24.1 160432 41334 41375 1 41, 854, 41334, 39 0 0 0 0 0 0 0 - SGN-E744990 1820 522 561 C04HBa0198L24.1 160432 41336 41375 1 39, 1259, 41336, 1821 7 0 0 3 3 4 1111 - SGN-E744968 1858 6 1837 C04HBa0198L24.1 160432 66507 69446 8 6,48,33,78,1058,6,157,442, 21,28,77,110,188,1246,1253,1410, 66507,66513,66561,66595,66675,67734,67740,69004, 39 0 0 0 0 0 0 0 - SGN-E744933 1596 303 342 C04HBa0198L24.1 160432 41336 41375 1 39, 1254, 41336, 30 0 0 0 0 0 0 0 + SGN-E744927 583 432 462 C04HBa0198L24.1 160432 24436 24466 1 30, 432, 24436, 37 1 0 0 0 0 2 9 + SGN-E551929 432 394 432 C04HBa0198L24.1 160432 63528 63575 3 7,17,14, 394,401,418, 63528,63537,63561, 38 1 0 0 0 0 2 9 + SGN-E553266 515 395 434 C04HBa0198L24.1 160432 63528 63576 3 7,17,15, 395,402,419, 63528,63537,63561, 486 0 0 0 0 0 3 1527 - SGN-E204702 486 0 486 C04HBa0198L24.1 160432 117952 119965 4 83,48,60,295, 0,83,131,191, 117952,119148,119518,119670, 36 1 0 0 0 0 0 0 - SGN-E203450 482 117 154 C04HBa0198L24.1 160432 24432 24469 1 37, 328, 24432, 396 0 0 0 0 0 3 1536 - SGN-E205588 396 0 396 C04HBa0198L24.1 160432 117972 119904 4 63,48,60,225, 0,63,111,171, 117972,119148,119518,119679, 39 0 0 0 0 0 0 0 - SGN-E208305 536 110 149 C04HBa0198L24.1 160432 41333 41372 1 39, 387, 41333, 41 0 0 0 0 0 0 0 - SGN-E211981 537 173 214 C04HBa0198L24.1 160432 41334 41375 1 41, 323, 41334, 723 0 0 0 0 0 0 0 - SGN-E210946 723 0 723 C04HBa0198L24.1 160432 66609 67332 1 723, 0, 66609, 41 0 0 0 0 0 0 0 + SGN-E578205 735 15 56 C04HBa0198L24.1 160432 41334 41375 1 41, 15, 41334, 76 4 0 0 0 0 0 0 + SGN-E578347 752 626 706 C04HBa0198L24.1 160432 7302 7382 1 80, 626, 7302, 459 15 0 0 1 10 4 1537 - SGN-E318898 484 0 484 C04HBa0198L24.1 160432 117907 119918 5 128,48,3,46,249, 0,128,176,179,235, 117907,119148,119212,119521,119669, 32 0 0 0 0 0 0 0 - SGN-E319362 410 105 137 C04HBa0198L24.1 160432 24437 24469 1 32, 273, 24437, 34 1 0 0 0 0 0 0 + SGN-E378337 745 285 320 C04HBa0198L24.1 160432 24434 24469 1 35, 285, 24434, 31 0 0 0 0 0 0 0 + SGN-E369471 766 0 31 C04HBa0198L24.1 160432 24436 24467 1 31, 0, 24436, 710 0 0 0 1 1 0 0 - SGN-E372132 711 0 711 C04HBa0198L24.1 160432 66634 67344 2 41,669, 0,42, 66634,66675, 672 0 0 0 0 0 1 1107 - SGN-E372133 672 0 672 C04HBa0198L24.1 160432 67708 69487 2 189,483, 0,189, 67708,69004, 635 12 0 0 0 0 4 4576 - SGN-E374094 664 0 647 C04HBa0198L24.1 160432 121457 126680 5 342,82,85,89,49, 17,359,441,526,615, 121457,122817,123481,125253,126631, 679 0 0 0 0 0 5 5483 - SGN-E374095 679 0 679 C04HBa0198L24.1 160432 121706 127868 6 93,82,85,89,75,255, 0,93,175,260,349,424, 121706,122817,123481,125253,126631,127613, 31 0 0 0 0 0 0 0 + SGN-E374378 673 453 484 C04HBa0198L24.1 160432 24436 24467 1 31, 453, 24436, 700 4 0 0 4 4 5 1721 - SGN-E375350 739 14 722 C04HBa0198L24.1 160432 109783 112208 10 411,114,91,29,5,5,15,14,16,4, 17,428,542,633,663,669,674,690,704,721, 109783,111682,111871,112045,112074,112079,112085,112100,112188,112204, 383 11 0 0 0 0 3 1527 - SGN-E375351 394 0 394 C04HBa0198L24.1 160432 117960 119881 4 75,48,60,211, 0,75,123,183, 117960,119148,119518,119670, 35 2 0 0 0 0 0 0 + SGN-E377152 607 363 400 C04HBa0198L24.1 160432 68339 68376 1 37, 363, 68339, 38 0 0 0 0 0 0 0 + SGN-E377421 521 342 380 C04HBa0198L24.1 160432 41335 41373 1 38, 342, 41335, 37 0 0 0 0 0 0 0 + SGN-E378055 608 463 500 C04HBa0198L24.1 160432 41338 41375 1 37, 463, 41338, 42 1 0 0 0 0 0 0 + SGN-E390309 540 369 412 C04HBa0198L24.1 160432 24449 24492 1 43, 369, 24449, 35 0 0 0 0 0 0 0 - SGN-E393275 269 130 165 C04HBa0198L24.1 160432 24432 24467 1 35, 104, 24432, 30 0 0 0 0 0 0 0 - SGN-E394591 221 147 177 C04HBa0198L24.1 160432 24434 24464 1 30, 44, 24434, 39 0 0 0 0 0 0 0 - SGN-E395898 688 111 150 C04HBa0198L24.1 160432 41333 41372 1 39, 538, 41333, 30 0 0 0 0 0 0 0 - SGN-E396221 644 21 51 C04HBa0198L24.1 160432 41333 41363 1 30, 593, 41333, 30 0 0 0 0 0 0 0 - SGN-E397085 564 534 564 C04HBa0198L24.1 160432 41345 41375 1 30, 0, 41345, 30 0 0 0 0 0 0 0 - SGN-E539450 533 147 177 C04HBa0198L24.1 160432 24436 24466 1 30, 356, 24436, 34 0 0 0 0 0 0 0 + SGN-E539470 799 682 716 C04HBa0198L24.1 160432 24433 24467 1 34, 682, 24433, 32 0 0 0 0 0 1 1 + SGN-E539849 627 140 172 C04HBa0198L24.1 160432 24434 24467 2 27,5, 140,167, 24434,24462, 41 0 0 0 0 0 0 0 + SGN-E539861 387 238 279 C04HBa0198L24.1 160432 41334 41375 1 41, 238, 41334, 39 0 0 0 0 0 0 0 + SGN-E539864 387 238 277 C04HBa0198L24.1 160432 41334 41373 1 39, 238, 41334, 31 0 0 0 0 0 0 0 - SGN-E543727 758 641 672 C04HBa0198L24.1 160432 24436 24467 1 31, 86, 24436, 44 0 0 1 1 1 1 6 - SGN-E544493 840 93 139 C04HBa0198L24.1 160432 24441 24492 2 35,10, 701,737, 24441,24482, 31 0 0 0 0 0 0 0 + SGN-E547738 481 352 383 C04HBa0198L24.1 160432 24436 24467 1 31, 352, 24436, 31 0 0 0 0 0 0 0 + SGN-E548291 558 0 31 C04HBa0198L24.1 160432 24436 24467 1 31, 0, 24436, 31 0 0 0 0 0 0 0 - SGN-E548797 735 119 150 C04HBa0198L24.1 160432 24436 24467 1 31, 585, 24436, 35 2 0 0 0 0 0 0 + SGN-E236373 607 363 400 C04HBa0198L24.1 160432 68339 68376 1 37, 363, 68339, 40 0 0 0 1 3 1 4 - SGN-E236516 504 320 363 C04HBa0198L24.1 160432 7374 7418 2 9,31, 141,153, 7374,7387, 37 1 0 0 0 0 2 10 + SGN-E235829 489 433 471 C04HBa0198L24.1 160432 63528 63576 3 7,16,15, 433,440,456, 63528,63538,63561, 38 0 0 0 0 0 0 0 + SGN-E237971 506 354 392 C04HBa0198L24.1 160432 41335 41373 1 38, 354, 41335, 40 0 0 0 0 0 0 0 - SGN-E237709 356 134 174 C04HBa0198L24.1 160432 41335 41375 1 40, 182, 41335, 40 0 0 0 0 0 0 0 - SGN-E240694 438 134 174 C04HBa0198L24.1 160432 41335 41375 1 40, 264, 41335, 40 0 0 0 0 0 0 0 - SGN-E240474 370 138 178 C04HBa0198L24.1 160432 41335 41375 1 40, 192, 41335, 40 0 0 0 0 0 0 0 - SGN-E240253 437 134 174 C04HBa0198L24.1 160432 41335 41375 1 40, 263, 41335, 40 0 0 0 0 0 0 0 - SGN-E231970 494 134 174 C04HBa0198L24.1 160432 41335 41375 1 40, 320, 41335, 40 0 0 0 0 0 0 0 + SGN-E232904 504 354 394 C04HBa0198L24.1 160432 41335 41375 1 40, 354, 41335, 506 1 0 0 0 0 3 4 - SGN-E725647 507 0 507 C04HBa0198L24.1 160432 67216 67727 4 10,9,9,479, 0,10,19,28, 67216,67228,67238,67248, 548 0 0 0 0 0 1 1107 - SGN-E725770 548 0 548 C04HBa0198L24.1 160432 67836 69491 2 61,487, 0,61, 67836,69004, 987 3 0 0 0 0 6 5484 - SGN-E727225 1000 0 990 C04HBa0198L24.1 160432 121414 127888 7 115,269,82,85,89,75,275, 10,125,394,476,561,650,725, 121414,121530,122817,123481,125253,126631,127613, 31 0 0 0 0 0 0 0 - SGN-E717849 597 359 390 C04HBa0198L24.1 160432 24437 24468 1 31, 207, 24437, 49 0 0 0 0 0 3 391 + SGN-E723326 678 626 675 C04HBa0198L24.1 160432 63114 63554 4 16,10,7,16, 626,642,652,659, 63114,63442,63528,63538, 43 1 0 0 0 0 2 415 + SGN-E724536 521 477 521 C04HBa0198L24.1 160432 63114 63573 3 16,16,12, 477,493,509, 63114,63538,63561, 38 2 0 0 0 0 0 0 - SGN-E732623 600 541 581 C04HBa0198L24.1 160432 69835 69875 1 40, 19, 69835, 637 0 0 0 0 0 4 4576 - SGN-E703068 695 0 637 C04HBa0198L24.1 160432 121448 126661 5 351,82,85,89,30, 58,409,491,576,665, 121448,122817,123481,125253,126631, 904 3 0 0 0 0 6 5484 - SGN-E705227 911 4 911 C04HBa0198L24.1 160432 121429 127820 7 97,272,82,85,89,75,207, 0,97,369,451,536,625,700, 121429,121527,122817,123481,125253,126631,127613, 30 0 0 0 0 0 0 0 + SGN-E713347 470 305 335 C04HBa0198L24.1 160432 24436 24466 1 30, 305, 24436, 31 0 0 0 0 0 0 0 - SGN-E713464 591 263 294 C04HBa0198L24.1 160432 24437 24468 1 31, 297, 24437, 32 0 0 1 0 0 0 0 - SGN-E242278 536 494 527 C04HBa0198L24.1 160432 24434 24467 1 33, 9, 24434, 41 0 0 0 0 0 0 0 - SGN-E243086 383 64 105 C04HBa0198L24.1 160432 41334 41375 1 41, 278, 41334, 41 0 0 0 0 0 0 0 - SGN-E244363 648 532 573 C04HBa0198L24.1 160432 41334 41375 1 41, 75, 41334, 41 0 0 0 0 0 0 0 - SGN-E247800 632 429 470 C04HBa0198L24.1 160432 41334 41375 1 41, 162, 41334, 30 0 0 0 0 0 0 0 - SGN-E247410 589 20 50 C04HBa0198L24.1 160432 41333 41363 1 30, 539, 41333, 41 0 0 0 0 0 0 0 - SGN-E248825 578 429 470 C04HBa0198L24.1 160432 41334 41375 1 41, 108, 41334, 41 0 0 0 0 0 0 0 - SGN-E249280 642 526 567 C04HBa0198L24.1 160432 41334 41375 1 41, 75, 41334, 30 0 0 0 0 0 0 0 - SGN-E245367 551 521 551 C04HBa0198L24.1 160432 41345 41375 1 30, 0, 41345, 41 0 0 0 0 0 0 0 - SGN-E248217 471 135 176 C04HBa0198L24.1 160432 41334 41375 1 41, 295, 41334, 31 0 0 0 0 0 0 0 + SGN-E249876 613 446 477 C04HBa0198L24.1 160432 24436 24467 1 31, 446, 24436, 41 0 0 0 0 0 0 0 - SGN-E257926 530 309 350 C04HBa0198L24.1 160432 41334 41375 1 41, 180, 41334, 792 1 0 1 0 0 6 7160 - SGN-E263415 794 0 794 C04HBa0198L24.1 160432 109847 117801 7 19,327,114,91,71,99,73, 0,19,346,460,551,622,721, 109847,109867,111682,111871,112045,112190,117728, 41 0 0 0 0 0 0 0 - SGN-E266579 537 60 101 C04HBa0198L24.1 160432 41334 41375 1 41, 436, 41334, 41 0 0 0 0 0 0 0 - SGN-E265318 569 60 101 C04HBa0198L24.1 160432 41334 41375 1 41, 468, 41334, 87 5 0 0 1 51 1 24 - SGN-E219032 407 202 345 C04HBa0198L24.1 160432 81502 81618 2 43,49, 62,156, 81502,81569, 519 1 0 0 1 1 2 1600 - SGN-E223470 539 0 521 C04HBa0198L24.1 160432 121411 123531 4 388,82,22,28, 18,406,488,511, 121411,122817,123481,123503, 428 0 0 0 1 1 1 1018 - SGN-E223531 447 0 429 C04HBa0198L24.1 160432 121411 122857 3 358,30,40, 18,377,407, 121411,121769,122817, 40 0 0 0 0 0 0 0 + SGN-E222246 431 263 303 C04HBa0198L24.1 160432 41335 41375 1 40, 263, 41335, 40 0 0 0 0 0 0 0 + SGN-E217461 384 222 262 C04HBa0198L24.1 160432 41335 41375 1 40, 222, 41335, 32 1 0 0 0 0 0 0 - SGN-E227427 430 200 233 C04HBa0198L24.1 160432 41343 41376 1 33, 197, 41343, 40 0 0 0 0 0 0 0 + SGN-E230928 384 223 263 C04HBa0198L24.1 160432 41335 41375 1 40, 223, 41335, 222 2 0 0 0 0 0 0 - SGN-E233965 242 0 224 C04HBa0198L24.1 160432 121411 121635 1 224, 18, 121411, 41 0 0 0 0 0 0 0 - SGN-E270536 526 50 91 C04HBa0198L24.1 160432 41334 41375 1 41, 435, 41334, 41 0 0 0 0 0 0 0 - SGN-E277058 457 55 96 C04HBa0198L24.1 160432 41334 41375 1 41, 361, 41334, 41 0 0 0 0 0 0 0 - SGN-E277072 585 4 45 C04HBa0198L24.1 160432 41334 41375 1 41, 540, 41334, 460 6 0 0 0 0 0 0 - SGN-E283015 481 0 466 C04HBa0198L24.1 160432 69000 69466 1 466, 15, 69000, 327 5 0 0 0 0 0 0 - SGN-E284807 332 0 332 C04HBa0198L24.1 160432 66806 67138 1 332, 0, 66806, 469 0 0 0 0 0 4 1624 - SGN-E278734 483 0 469 C04HBa0198L24.1 160432 117728 119821 5 77,133,48,60,151, 14,91,224,272,332, 117728,117902,119148,119518,119670, 31 0 0 0 0 0 0 0 - SGN-E277505 498 59 90 C04HBa0198L24.1 160432 24437 24468 1 31, 408, 24437, 532 0 0 0 0 0 0 0 - SGN-E278168 532 0 532 C04HBa0198L24.1 160432 67157 67689 1 532, 0, 67157, 37 1 0 0 0 0 2 10 + SGN-E290344 473 383 421 C04HBa0198L24.1 160432 63528 63576 3 7,16,15, 383,390,406, 63528,63538,63561, 39 0 0 0 0 0 0 0 - SGN-E282130 351 151 190 C04HBa0198L24.1 160432 41336 41375 1 39, 161, 41336, 40 0 0 0 0 0 0 0 + SGN-E292312 497 340 380 C04HBa0198L24.1 160432 41335 41375 1 40, 340, 41335, 39 0 0 0 0 0 0 0 - SGN-E294577 535 256 295 C04HBa0198L24.1 160432 41336 41375 1 39, 240, 41336, 30 0 0 0 0 0 0 0 + SGN-E291470 551 459 489 C04HBa0198L24.1 160432 24436 24466 1 30, 459, 24436, 570 0 0 0 0 0 4 4465 - SGN-E300495 570 0 570 C04HBa0198L24.1 160432 122833 127868 5 66,85,89,75,255, 0,66,151,240,315, 122833,123481,125253,126631,127613, 554 0 0 0 0 0 1 1107 - SGN-E299755 554 0 554 C04HBa0198L24.1 160432 67830 69491 2 67,487, 0,67, 67830,69004, 31 0 0 0 0 0 0 0 - SGN-E303073 441 118 149 C04HBa0198L24.1 160432 24436 24467 1 31, 292, 24436, 200 1 0 0 0 0 0 0 - SGN-E307863 201 0 201 C04HBa0198L24.1 160432 67337 67538 1 201, 0, 67337, 37 1 0 0 0 0 2 10 + SGN-E309231 227 184 222 C04HBa0198L24.1 160432 63528 63576 3 7,16,15, 184,191,207, 63528,63538,63561, 323 0 0 0 0 0 0 0 - SGN-E308996 359 0 323 C04HBa0198L24.1 160432 66728 67051 1 323, 36, 66728, 698 1 0 1 1 1 8 6928 - SGN-E334043 701 0 701 C04HBa0198L24.1 160432 111554 119182 10 36,6,54,144,91,71,50,81,133,34, 0,36,43,97,241,332,403,453,534,667, 111554,111591,111597,111652,111871,112045,112190,117728,117902,119148, 31 0 0 0 0 0 0 0 + SGN-E331093 512 131 162 C04HBa0198L24.1 160432 24436 24467 1 31, 131, 24436, 32 0 0 0 0 0 0 0 - SGN-E331884 606 234 266 C04HBa0198L24.1 160432 24437 24469 1 32, 340, 24437, 38 0 0 0 0 0 0 0 - SGN-E326629 614 80 118 C04HBa0198L24.1 160432 41331 41369 1 38, 496, 41331, 41 0 0 0 0 0 0 0 - SGN-E324336 635 303 344 C04HBa0198L24.1 160432 41334 41375 1 41, 291, 41334, 41 0 0 0 0 0 0 0 - SGN-E316335 629 43 84 C04HBa0198L24.1 160432 41334 41375 1 41, 545, 41334, 636 0 0 0 3 3 4 6966 - SGN-E343843 639 0 639 C04HBa0198L24.1 160432 112248 119850 8 11,30,13,52,242,48,60,180, 0,12,42,56,109,351,399,459, 112248,112259,117728,117741,117793,119148,119518,119670, 41 0 0 0 0 0 0 0 - SGN-E344958 738 513 554 C04HBa0198L24.1 160432 41334 41375 1 41, 184, 41334, 41 0 0 0 0 0 0 0 - SGN-E345941 684 293 334 C04HBa0198L24.1 160432 41334 41375 1 41, 350, 41334, 41 0 0 0 0 0 0 0 - SGN-E346666 721 178 219 C04HBa0198L24.1 160432 41334 41375 1 41, 502, 41334, 36 3 0 0 0 0 0 0 - SGN-E349548 618 74 113 C04HBa0198L24.1 160432 41336 41375 1 39, 505, 41336, 42 1 0 0 1 4 2 12 + SGN-E357823 608 241 288 C04HBa0198L24.1 160432 41332 41387 3 25,11,7, 241,266,281, 41332,41358,41380, 35 0 0 0 0 0 0 0 + SGN-E349085 745 590 625 C04HBa0198L24.1 160432 24432 24467 1 35, 590, 24432, 35 0 0 0 0 0 0 0 + SGN-E350209 738 590 625 C04HBa0198L24.1 160432 24432 24467 1 35, 590, 24432, 42 1 0 0 1 4 2 12 + SGN-E350472 401 224 271 C04HBa0198L24.1 160432 41332 41387 3 25,11,7, 224,249,264, 41332,41358,41380, 34 0 0 0 0 0 0 0 + SGN-E351307 368 242 276 C04HBa0198L24.1 160432 24433 24467 1 34, 242, 24433, 32 1 0 0 0 0 0 0 - SGN-E741115 403 190 223 C04HBa0198L24.1 160432 41343 41376 1 33, 180, 41343, 35 1 0 0 0 0 0 0 - SGN-E691516 741 273 309 C04HBa0198L24.1 160432 27807 27843 1 36, 432, 27807, 61 5 0 0 0 0 0 0 + SGN-E691704 799 508 574 C04HBa0198L24.1 160432 9309 9375 1 66, 508, 9309, 61 5 0 0 0 0 0 0 + SGN-E691727 761 509 575 C04HBa0198L24.1 160432 9309 9375 1 66, 509, 9309, 46 1 0 0 0 0 0 0 - SGN-E696994 809 637 684 C04HBa0198L24.1 160432 81562 81609 1 47, 125, 81562, 44 0 0 0 0 0 0 0 - SGN-E355680 493 421 465 C04HBa0198L24.1 160432 24438 24482 1 44, 28, 24438,