psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 42 0 0 0 1 4 1 1 + SGN-E744791 1405 1041 1087 C04SLm0014G22.1 51668 41329 41372 2 23,19, 1041,1068, 41329,41353, 441 3 0 0 0 0 2 1005 - SGN-E201226 444 0 444 C04SLm0014G22.1 51668 25596 27045 3 185,133,126, 0,185,318, 25596,26327,26919, 395 1 0 0 0 0 0 0 + SGN-E203501 396 0 396 C04SLm0014G22.1 51668 36522 36918 1 396, 0, 36522, 45 1 0 0 1 1 0 0 + SGN-E206694 376 25 72 C04SLm0014G22.1 51668 6871 6917 2 4,42, 25,30, 6871,6875, 40 0 0 0 0 0 0 0 - SGN-E209868 584 23 63 C04SLm0014G22.1 51668 41326 41366 1 40, 521, 41326, 239 7 0 0 5 52 5 57 + SGN-E578017 542 2 300 C04SLm0014G22.1 51668 6767 7070 8 16,21,25,31,43,57,39,14, 2,30,53,107,138,181,240,286, 6767,6793,6814,6879,6911,6955,7012,7056, 45 0 0 0 0 0 2 6 + SGN-E577578 736 75 120 C04SLm0014G22.1 51668 28623 28674 3 18,15,12, 75,93,108, 28623,28645,28662, 499 2 0 0 1 1 1 1 + SGN-E323114 502 0 502 C04SLm0014G22.1 51668 36530 37032 3 394,102,5, 0,394,497, 36530,36925,37027, 405 14 0 0 0 0 2 1005 - SGN-E308787 464 45 464 C04SLm0014G22.1 51668 25567 26991 3 214,133,72, 0,214,347, 25567,26327,26919, 529 4 0 0 0 0 2 1005 - SGN-E308789 533 0 533 C04SLm0014G22.1 51668 25495 27033 3 286,133,114, 0,286,419, 25495,26327,26919, 527 5 0 0 0 0 3 740 - SGN-E311078 532 0 532 C04SLm0014G22.1 51668 25178 26450 4 213,113,83,123, 0,213,326,409, 25178,25479,25698,26327, 45 1 0 0 1 5 3 8 - SGN-E379855 705 485 536 C04SLm0014G22.1 51668 21212 21266 4 8,8,12,18, 169,177,185,202, 21212,21221,21230,21248, 42 0 0 0 1 1 2 3 - SGN-E367833 346 259 302 C04SLm0014G22.1 51668 28606 28651 4 13,5,18,6, 44,57,63,81, 28606,28621,28626,28645, 755 5 0 0 1 1 2 2 - SGN-E368924 783 0 761 C04SLm0014G22.1 51668 32339 33101 4 334,341,80,5, 22,356,698,778, 32339,32674,33015,33096, 627 1 0 0 0 0 1 447 - SGN-E368925 628 0 628 C04SLm0014G22.1 51668 32804 33879 2 529,99, 0,529, 32804,33780, 696 0 0 0 0 0 2 634 - SGN-E372175 705 0 696 C04SLm0014G22.1 51668 25051 26381 3 340,302,54, 9,349,651, 25051,25479,26327, 441 0 0 0 0 0 3 489 - SGN-E372881 441 0 441 C04SLm0014G22.1 51668 31904 32834 4 6,301,50,84, 0,6,307,357, 31904,32305,32698,32750, 197 14 0 0 1 5 2 95 - SGN-E372881 441 0 216 C04SLm0014G22.1 51668 25309 25615 3 82,44,85, 225,307,356, 25309,25479,25530, 441 0 0 0 0 0 3 488 - SGN-E372882 441 0 441 C04SLm0014G22.1 51668 31904 32833 4 6,302,50,83, 0,6,308,358, 31904,32304,32698,32750, 196 14 0 0 1 5 2 95 - SGN-E372882 441 0 215 C04SLm0014G22.1 51668 25309 25614 3 82,44,84, 226,308,357, 25309,25479,25530, 50 1 0 0 0 0 0 0 + SGN-E375649 732 261 312 C04SLm0014G22.1 51668 41299 41350 1 51, 261, 41299, 50 1 0 0 0 0 0 0 + SGN-E375650 497 329 380 C04SLm0014G22.1 51668 41299 41350 1 51, 329, 41299, 45 1 0 0 1 5 3 8 - SGN-E376588 662 485 536 C04SLm0014G22.1 51668 21212 21266 4 8,13,7,18, 126,134,147,159, 21212,21221,21235,21248, 52 0 0 0 1 11 3 21 - SGN-E376911 668 521 584 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 84,102,117,139, 28637,28645,28662,28702, 44 0 0 0 1 11 2 3 - SGN-E377421 521 341 396 C04SLm0014G22.1 51668 28637 28684 3 7,15,22, 125,143,158, 28637,28645,28662, 42 0 0 0 1 4 1 1 + SGN-E378034 555 278 324 C04SLm0014G22.1 51668 41329 41372 2 23,19, 278,305, 41329,41353, 42 0 0 0 1 4 1 1 + SGN-E390564 575 297 343 C04SLm0014G22.1 51668 41329 41372 2 23,19, 297,324, 41329,41353, 42 0 0 0 1 4 1 1 + SGN-E390798 469 190 236 C04SLm0014G22.1 51668 41329 41372 2 23,19, 190,217, 41329,41353, 220 1 0 0 1 1 0 0 + SGN-E395556 222 0 222 C04SLm0014G22.1 51668 36521 36742 2 211,10, 0,212, 36521,36732, 42 0 0 0 1 4 1 1 + SGN-E396557 689 287 333 C04SLm0014G22.1 51668 41329 41372 2 23,19, 287,314, 41329,41353, 42 0 0 0 1 4 1 1 + SGN-E396796 515 113 159 C04SLm0014G22.1 51668 41329 41372 2 23,19, 113,140, 41329,41353, 436 8 0 0 0 0 0 0 - SGN-E397394 473 0 444 C04SLm0014G22.1 51668 25167 25611 1 444, 29, 25167, 344 6 0 0 3 13 1 10 - SGN-E397395 364 0 363 C04SLm0014G22.1 51668 26118 26478 4 61,88,48,153, 1,73,162,211, 26118,26189,26277,26325, 39 0 0 0 1 6 0 0 + SGN-E397555 665 352 397 C04SLm0014G22.1 51668 41333 41372 2 21,18, 352,379, 41333,41354, 337 0 0 0 0 0 0 0 + SGN-E398469 350 0 337 C04SLm0014G22.1 51668 37120 37457 1 337, 0, 37120, 48 0 0 0 1 1 3 4 - SGN-E539861 387 227 276 C04SLm0014G22.1 51668 28599 28651 5 6,13,5,18,6, 111,117,130,136,154, 28599,28606,28621,28626,28645, 48 0 0 0 1 1 3 4 - SGN-E539864 387 227 276 C04SLm0014G22.1 51668 28599 28651 5 6,13,5,18,6, 111,117,130,136,154, 28599,28606,28621,28626,28645, 42 0 0 0 1 4 1 1 + SGN-E540080 642 370 416 C04SLm0014G22.1 51668 41329 41372 2 23,19, 370,397, 41329,41353, 38 1 0 0 1 1 1 2 + SGN-E545067 841 657 697 C04SLm0014G22.1 51668 28578 28619 2 34,5, 657,692, 28578,28614, 571 4 0 0 0 0 3 740 - SGN-E545563 631 0 575 C04SLm0014G22.1 51668 25136 26451 4 255,113,83,124, 56,311,424,507, 25136,25479,25698,26327, 571 4 0 0 0 0 3 740 - SGN-E545564 602 0 575 C04SLm0014G22.1 51668 25136 26451 4 255,113,83,124, 27,282,395,478, 25136,25479,25698,26327, 41 1 0 0 1 3 0 0 + SGN-E548413 835 742 787 C04SLm0014G22.1 51668 41306 41348 2 34,8, 742,779, 41306,41340, 42 0 0 0 1 4 1 1 + SGN-E235335 622 568 614 C04SLm0014G22.1 51668 41329 41372 2 23,19, 568,595, 41329,41353, 52 0 0 0 1 11 3 21 + SGN-E235418 626 120 183 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 120,138,153,175, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 + SGN-E237709 356 120 183 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 120,138,153,175, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 + SGN-E237471 394 120 183 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 120,138,153,175, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 + SGN-E240694 438 120 183 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 120,138,153,175, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 + SGN-E240357 593 120 183 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 120,138,153,175, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 + SGN-E240253 437 120 183 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 120,138,153,175, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 + SGN-E231970 494 120 183 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 120,138,153,175, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 - SGN-E232904 504 345 408 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 96,114,129,151, 28637,28645,28662,28702, 50 1 0 0 0 0 0 0 + SGN-E719748 868 371 422 C04SLm0014G22.1 51668 41299 41350 1 51, 371, 41299, 50 1 0 0 0 0 0 0 + SGN-E725168 826 371 422 C04SLm0014G22.1 51668 41299 41350 1 51, 371, 41299, 34 1 0 0 0 0 0 0 + SGN-E733034 720 657 692 C04SLm0014G22.1 51668 41301 41336 1 35, 657, 41301, 32 0 0 0 0 0 0 0 + SGN-E735271 553 98 130 C04SLm0014G22.1 51668 41305 41337 1 32, 98, 41305, 39 0 0 0 1 1 2 3 - SGN-E737230 856 698 738 C04SLm0014G22.1 51668 28609 28651 4 10,5,18,6, 118,128,134,152, 28609,28621,28626,28645, 430 1 0 0 0 0 1 447 - SGN-E247399 431 0 431 C04SLm0014G22.1 51668 33001 33879 2 332,99, 0,332, 33001,33780, 176 13 0 0 0 0 1 459 - SGN-E247399 431 0 189 C04SLm0014G22.1 51668 26370 27018 2 90,99, 242,332, 26370,26919, 50 1 0 0 0 0 0 0 + SGN-E256108 585 329 380 C04SLm0014G22.1 51668 41299 41350 1 51, 329, 41299, 719 1 0 0 1 1 3 739 - SGN-E263312 721 0 721 C04SLm0014G22.1 51668 32429 33888 5 63,114,302,133,108, 0,64,178,480,613, 32429,32492,32698,33200,33780, 484 40 0 0 1 101 3 1194 - SGN-E263312 721 0 625 C04SLm0014G22.1 51668 25309 27027 4 82,271,63,108, 96,178,550,613, 25309,25479,26397,26919, 281 0 0 0 0 0 0 0 + SGN-E220098 386 91 372 C04SLm0014G22.1 51668 37087 37368 1 281, 91, 37087, 52 0 0 0 1 11 3 21 - SGN-E222571 450 273 336 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 114,132,147,169, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 - SGN-E222246 431 254 317 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 114,132,147,169, 28637,28645,28662,28702, 52 0 0 0 1 11 3 21 - SGN-E217461 384 213 276 C04SLm0014G22.1 51668 28637 28710 4 7,15,22,8, 108,126,141,163, 28637,28645,28662,28702, 50 1 0 0 0 0 0 0 + SGN-E276578 508 338 389 C04SLm0014G22.1 51668 41299 41350 1 51, 338, 41299, 509 1 0 0 0 0 2 647 - SGN-E290303 510 0 510 C04SLm0014G22.1 51668 32745 33902 3 255,133,122, 0,255,388, 32745,33200,33780, 379 30 0 0 1 101 2 1106 - SGN-E290303 510 0 510 C04SLm0014G22.1 51668 25526 27041 3 224,63,122, 0,325,388, 25526,26397,26919, 533 0 0 0 0 0 2 647 - SGN-E282085 533 0 533 C04SLm0014G22.1 51668 32708 33888 3 292,133,108, 0,292,425, 32708,33200,33780, 402 30 0 0 1 101 2 1106 - SGN-E282085 533 0 533 C04SLm0014G22.1 51668 25489 27027 3 261,63,108, 0,362,425, 25489,26397,26919, 441 0 0 0 0 0 3 488 - SGN-E292411 441 0 441 C04SLm0014G22.1 51668 31904 32833 4 6,302,50,83, 0,6,308,358, 31904,32304,32698,32750, 196 14 0 0 1 5 2 95 - SGN-E292411 441 0 215 C04SLm0014G22.1 51668 25309 25614 3 82,44,84, 226,308,357, 25309,25479,25530, 695 7 0 0 0 0 3 1093 - SGN-E291985 702 0 702 C04SLm0014G22.1 51668 25228 27023 4 163,302,133,104, 0,163,465,598, 25228,25479,26327,26919, 434 5 0 0 3 10 1 4 - SGN-E304916 449 0 449 C04SLm0014G22.1 51668 26034 26477 4 80,159,48,152, 0,88,248,297, 26034,26118,26277,26325, 363 1 0 0 2 2 1 459 - SGN-E309014 377 0 366 C04SLm0014G22.1 51668 26209 27032 4 68,49,134,113, 11,80,130,264, 26209,26277,26326,26919, 189 14 0 0 0 0 1 447 - SGN-E309014 377 0 203 C04SLm0014G22.1 51668 33243 33893 2 90,113, 174,264, 33243,33780, 356 3 0 0 4 4 1 88 - SGN-E309565 393 0 363 C04SLm0014G22.1 51668 25041 25488 6 75,175,31,51,18,9, 30,106,282,314,366,384, 25041,25116,25291,25322,25373,25479, 38 0 0 0 0 0 0 0 + SGN-E326629 614 77 115 C04SLm0014G22.1 51668 41304 41342 1 38, 77, 41304, 85 1 0 0 2 253 5 12677 - SGN-E341520 673 296 635 C04SLm0014G22.1 51668 28573 41336 7 8,25,11,6,5,26,5, 38,46,71,82,89,346,372, 28573,28582,28608,28621,28627,41304,41331, 49 0 0 0 0 0 0 0 + SGN-E335434 448 361 410 C04SLm0014G22.1 51668 41306 41355 1 49, 361, 41306, 51 1 0 0 1 2 0 0 + SGN-E335476 582 361 415 C04SLm0014G22.1 51668 41325 41377 2 47,5, 361,410, 41325,41372, 49 0 0 0 0 0 0 0 + SGN-E336439 424 328 377 C04SLm0014G22.1 51668 41306 41355 1 49, 328, 41306, 60 2 0 0 0 0 1 6 - SGN-E336491 580 487 549 C04SLm0014G22.1 51668 41299 41367 2 7,55, 31,38, 41299,41312, 172 8 0 0 0 0 3 3 + SGN-E353253 674 14 194 C04SLm0014G22.1 51668 6885 7068 4 27,41,84,28, 14,41,82,166, 6885,6913,6955,7040, 42 0 0 0 1 4 1 1 + SGN-E349578 725 558 604 C04SLm0014G22.1 51668 41329 41372 2 23,19, 558,585, 41329,41353, 60 2 0 0 0 0 1 6 + SGN-E349548 618 108 170 C04SLm0014G22.1 51668 41299 41367 2 7,55, 108,115, 41299,41312, 54 1 0 0 1 1 3 4 + SGN-E349548 618 112 168 C04SLm0014G22.1 51668 28573 28632 5 8,25,11,6,5, 112,120,145,156,163, 28573,28582,28608,28621,28627, 730 27 0 0 5 49 7 53 - SGN-E693965 827 0 806 C04SLm0014G22.1 51668 26226 27036 10 5,41,356,42,47,94,22,4,8,138, 21,26,67,424,479,526,622,671,675,689, 26226,26232,26289,26645,26687,26735,26834,26876,26881,26898, 122 7 0 0 0 0 1 1 - SGN-E693965 827 0 129 C04SLm0014G22.1 51668 33767 33897 2 5,124, 698,703, 33767,33773,