psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 39 0 0 0 1 7 1 6 - SGN-E747703 1222 1114 1160 C04SLm0130G07.1 102775 23559 23604 2 32,7, 62,101, 23559,23597, 44 2 0 0 0 0 0 0 + SGN-E689213 856 663 709 C04SLm0130G07.1 102775 19523 19569 1 46, 663, 19523, 272 14 0 0 2 3 3 37 - SGN-E204223 580 291 580 C04SLm0130G07.1 102775 11912 12235 6 34,48,162,7,15,20, 0,36,85,247,254,269, 11912,11946,11994,12162,12191,12215, 37 1 0 0 0 0 0 0 - SGN-E204092 457 414 452 C04SLm0130G07.1 102775 12196 12234 1 38, 5, 12196, 60 2 0 0 0 0 1 3 - SGN-E577899 392 0 62 C04SLm0130G07.1 102775 12098 12163 2 5,57, 330,335, 12098,12106, 98 4 0 0 0 0 0 0 + SGN-E577960 387 285 387 C04SLm0130G07.1 102775 11835 11937 1 102, 285, 11835, 230 19 0 0 0 0 0 0 - SGN-E578392 506 255 504 C04SLm0130G07.1 102775 11986 12235 1 249, 2, 11986, 408 0 0 0 0 0 2 5808 + SGN-E319720 408 0 408 C04SLm0130G07.1 102775 33480 39696 3 277,98,33, 0,277,375, 33480,39463,39663, 32 0 0 0 0 0 0 0 - SGN-E319362 410 106 138 C04SLm0130G07.1 102775 23560 23592 1 32, 272, 23560, 553 1 0 0 0 0 2 5808 + SGN-E318698 554 0 554 C04SLm0130G07.1 102775 33337 39699 3 420,98,36, 0,420,518, 33337,39463,39663, 32 1 0 0 0 0 0 0 + SGN-E374116 649 526 559 C04SLm0130G07.1 102775 23558 23591 1 33, 526, 23558, 35 1 0 0 0 0 0 0 - SGN-E375052 649 608 644 C04SLm0130G07.1 102775 12196 12232 1 36, 5, 12196, 32 1 0 0 0 0 0 0 - SGN-E375053 640 607 640 C04SLm0130G07.1 102775 12199 12232 1 33, 0, 12199, 246 15 0 0 1 1 3 37 - SGN-E374844 554 291 553 C04SLm0130G07.1 102775 11937 12235 5 57,162,7,15,20, 1,59,221,228,243, 11937,11994,12162,12191,12215, 118 5 0 0 1 1 1 212 + SGN-E376754 662 534 658 C04SLm0130G07.1 102775 11835 12170 3 45,65,13, 534,580,645, 11835,11880,12157, 222 13 0 0 2 3 0 0 - SGN-E377238 484 0 238 C04SLm0130G07.1 102775 11852 12087 3 94,48,93, 246,342,391, 11852,11946,11994, 85 5 0 0 0 0 1 21 + SGN-E377316 765 673 763 C04SLm0130G07.1 102775 11835 11946 2 28,62, 673,701, 11835,11884, 76 4 0 0 0 0 1 167 - SGN-E391901 346 266 346 C04SLm0130G07.1 102775 11986 12233 2 8,72, 0,8, 11986,12161, 263 12 0 0 1 1 2 3884 - SGN-E392202 453 61 337 C04SLm0130G07.1 102775 23816 27975 4 7,37,6,225, 116,124,161,167, 23816,23823,24653,27750, 260 15 0 0 1 1 2 3884 - SGN-E392422 609 218 494 C04SLm0130G07.1 102775 23816 27975 4 7,37,6,225, 115,123,160,166, 23816,23823,24653,27750, 261 11 0 0 2 2 2 3884 - SGN-E392423 543 214 488 C04SLm0130G07.1 102775 23819 27975 5 4,37,6,22,203, 55,60,97,103,126, 23819,23823,24653,27750,27772, 87 3 0 0 1 1 2 3884 - SGN-E392578 207 0 91 C04SLm0130G07.1 102775 23816 27790 4 7,37,6,40, 116,124,161,167, 23816,23823,24653,27750, 264 11 0 0 1 1 2 3884 - SGN-E392579 606 214 490 C04SLm0130G07.1 102775 23816 27975 4 7,37,6,225, 116,124,161,167, 23816,23823,24653,27750, 106 5 0 0 1 1 2 3884 - SGN-E392587 230 2 114 C04SLm0130G07.1 102775 23816 27811 4 7,37,6,61, 116,124,161,167, 23816,23823,24653,27750, 37 1 0 0 0 0 0 0 - SGN-E394807 217 175 213 C04SLm0130G07.1 102775 12196 12234 1 38, 4, 12196, 314 14 0 0 4 19 4 3974 - SGN-E397884 616 184 531 C04SLm0130G07.1 102775 23778 28080 8 14,9,7,13,24,6,225,30, 85,102,125,133,147,171,177,402, 23778,23792,23816,23823,23836,24653,27750,28050, 264 11 0 0 1 1 2 3884 - SGN-E397911 605 214 490 C04SLm0130G07.1 102775 23816 27975 4 7,37,6,225, 115,123,160,166, 23816,23823,24653,27750, 38 0 0 0 0 0 0 0 - SGN-E398336 459 416 454 C04SLm0130G07.1 102775 12196 12234 1 38, 5, 12196, 233 0 0 0 0 0 3 955 - SGN-E537729 786 0 233 C04SLm0130G07.1 102775 3017 4205 4 53,54,50,76, 553,606,660,710, 3017,3254,3428,4129, 733 31 0 0 1 5 2 113 - SGN-E543213 782 0 769 C04SLm0130G07.1 102775 30637 31514 3 8,208,548, 13,21,234, 30637,30647,30966, 67 2 0 0 0 0 0 0 + SGN-E543214 777 62 131 C04SLm0130G07.1 102775 24124 24193 1 69, 62, 24124, 406 14 0 0 1 1 1 8 - SGN-E543214 777 356 777 C04SLm0130G07.1 102775 31363 31791 2 413,7, 0,414, 31363,31784, 83 6 0 0 0 0 0 0 + SGN-E546063 812 695 784 C04SLm0130G07.1 102775 12084 12173 1 89, 695, 12084, 489 26 0 0 0 0 0 0 + SGN-E547123 529 0 515 C04SLm0130G07.1 102775 26370 26885 1 515, 0, 26370, 161 10 0 0 0 0 0 0 + SGN-E547124 713 542 713 C04SLm0130G07.1 102775 23994 24165 1 171, 542, 23994, 51 1 0 0 0 0 0 0 - SGN-E547334 453 379 431 C04SLm0130G07.1 102775 12183 12235 1 52, 22, 12183, 51 1 0 0 0 0 0 0 - SGN-E547335 453 379 431 C04SLm0130G07.1 102775 12183 12235 1 52, 22, 12183, 222 13 0 0 2 3 0 0 - SGN-E233594 310 0 238 C04SLm0130G07.1 102775 11852 12087 3 94,48,93, 72,168,217, 11852,11946,11994, 222 13 0 0 2 3 0 0 - SGN-E233735 514 0 238 C04SLm0130G07.1 102775 11852 12087 3 94,48,93, 276,372,421, 11852,11946,11994, 221 13 0 0 2 3 0 0 - SGN-E237992 666 0 237 C04SLm0130G07.1 102775 11852 12086 3 94,48,92, 429,525,574, 11852,11946,11994, 35 1 0 0 0 0 0 0 - SGN-E227060 564 523 559 C04SLm0130G07.1 102775 12196 12232 1 36, 5, 12196, 83 7 0 0 0 0 0 0 + SGN-E240526 430 340 430 C04SLm0130G07.1 102775 11835 11925 1 90, 340, 11835, 222 13 0 0 2 3 0 0 - SGN-E240879 434 0 238 C04SLm0130G07.1 102775 11852 12087 3 94,48,93, 196,292,341, 11852,11946,11994, 222 13 0 0 2 3 0 0 - SGN-E242674 528 0 238 C04SLm0130G07.1 102775 11852 12087 3 94,48,93, 290,386,435, 11852,11946,11994, 31 1 0 0 0 0 0 0 - SGN-E242812 626 368 400 C04SLm0130G07.1 102775 23559 23591 1 32, 226, 23559, 222 13 0 0 2 3 0 0 - SGN-E233074 643 0 238 C04SLm0130G07.1 102775 11852 12087 3 94,48,93, 405,501,550, 11852,11946,11994, 323 1 0 0 0 0 4 1046 - SGN-E728112 777 6 330 C04SLm0130G07.1 102775 3017 4387 5 53,54,50,78,89, 447,500,554,604,682, 3017,3254,3428,4129,4298, 38 0 0 0 0 0 0 0 - SGN-E719799 683 556 594 C04SLm0130G07.1 102775 12196 12234 1 38, 89, 12196, 38 0 0 0 0 0 0 0 - SGN-E721929 648 556 594 C04SLm0130G07.1 102775 12196 12234 1 38, 54, 12196, 876 1 0 0 0 0 6 12315 + SGN-E724015 878 1 878 C04SLm0130G07.1 102775 33403 46595 7 354,98,51,114,57,86,117, 1,355,453,504,618,675,761, 33403,39463,39663,39876,46158,46296,46478, 32 0 0 0 0 0 0 0 + SGN-E242278 536 488 520 C04SLm0130G07.1 102775 23559 23591 1 32, 488, 23559, 561 35 0 0 1 19 3 309 - SGN-E245630 623 8 623 C04SLm0130G07.1 102775 29346 30251 4 210,113,6,267, 0,229,342,348, 29346,29659,29975,29984, 238 15 0 0 1 7 2 23 + SGN-E249253 618 358 618 C04SLm0130G07.1 102775 11835 12111 3 109,19,125, 358,467,493, 11835,11946,11986, 292 19 0 0 1 7 2 23 + SGN-E253695 540 222 540 C04SLm0130G07.1 102775 11835 12169 3 109,19,183, 222,331,357, 11835,11946,11986, 53 2 0 0 0 0 0 0 - SGN-E256217 514 0 55 C04SLm0130G07.1 102775 11835 11890 1 55, 459, 11835, 232 0 0 0 0 0 3 955 - SGN-E266850 584 0 232 C04SLm0130G07.1 102775 3017 4204 4 53,54,50,75, 352,405,459,509, 3017,3254,3428,4129, 97 1 0 0 1 44 3 24 + SGN-E217478 385 221 363 C04SLm0130G07.1 102775 11835 11957 4 28,39,20,11, 221,249,332,352, 11835,11884,11925,11946, 102 1 0 0 2 46 4 25 + SGN-E228654 468 304 453 C04SLm0130G07.1 102775 11835 11963 5 28,39,20,11,5, 304,332,415,435,448, 11835,11884,11925,11946,11958, 102 2 0 0 1 44 3 24 + SGN-E229134 397 233 381 C04SLm0130G07.1 102775 11835 11963 4 28,39,20,17, 233,261,344,364, 11835,11884,11925,11946, 36 0 0 0 0 0 0 0 - SGN-E233998 377 319 355 C04SLm0130G07.1 102775 12196 12232 1 36, 22, 12196, 36 0 0 0 0 0 0 0 - SGN-E234253 351 293 329 C04SLm0130G07.1 102775 12196 12232 1 36, 22, 12196, 40 1 0 0 0 0 1 3 - SGN-E276199 500 82 123 C04SLm0130G07.1 102775 23547 23591 2 7,34, 377,384, 23547,23557, 80 4 0 0 0 0 0 0 - SGN-E273974 304 220 304 C04SLm0130G07.1 102775 27884 27968 1 84, 0, 27884, 211 10 0 0 0 0 0 0 - SGN-E274092 434 213 434 C04SLm0130G07.1 102775 27754 27975 1 221, 0, 27754, 67 2 0 0 0 0 0 0 + SGN-E303831 465 61 130 C04SLm0130G07.1 102775 24124 24193 1 69, 61, 24124, 97 3 0 0 1 1 1 8 - SGN-E303831 465 355 456 C04SLm0130G07.1 102775 31683 31791 2 93,7, 9,103, 31683,31784, 79 3 0 0 1 7 1 1 + SGN-E309286 599 341 430 C04SLm0130G07.1 102775 46133 46216 3 6,8,68, 341,354,362, 46133,46139,46148, 45 0 0 0 1 10 1 12 + SGN-E332822 620 49 104 C04SLm0130G07.1 102775 23538 23595 2 10,35, 49,69, 23538,23560, 45 0 0 0 1 10 1 12 + SGN-E331882 627 219 274 C04SLm0130G07.1 102775 23538 23595 2 10,35, 219,239, 23538,23560, 45 0 0 0 1 10 1 12 + SGN-E331883 609 219 274 C04SLm0130G07.1 102775 23538 23595 2 10,35, 219,239, 23538,23560, 45 0 0 0 1 10 1 12 + SGN-E331884 606 219 274 C04SLm0130G07.1 102775 23538 23595 2 10,35, 219,239, 23538,23560, 45 0 0 0 1 10 1 12 + SGN-E316250 703 214 269 C04SLm0130G07.1 102775 23538 23595 2 10,35, 214,234, 23538,23560, 32 0 0 0 0 0 0 0 - SGN-E316250 703 230 262 C04SLm0130G07.1 102775 23560 23592 1 32, 441, 23560, 32 0 0 0 0 0 0 0 - SGN-E349972 832 800 832 C04SLm0130G07.1 102775 23559 23591 1 32, 0, 23559, 51 1 0 0 0 0 0 0 - SGN-E362032 430 378 430 C04SLm0130G07.1 102775 12183 12235 1 52, 0, 12183,