GeneSeqer. Version of March 12, 2006. Date run: Tue Jul 25 14:53:09 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 175665 Total sequence length: 93213537 Minimum sequence length: 89 Maximum sequence length: 1082 Length distribution (number of sequences of specified length): < 100: 1 < 200: 2188 < 300: 8544 < 400: 20465 < 500: 39499 < 600: 49432 < 700: 32872 < 800: 19308 < 900: 3155 < 1000: 193 >=1000: 8 Input file : /tmp/bac-submission-temp-61GTC/C04HBa0119A16/C04HBa0119A16.seq.screen ________________________________________________________________________________ Sequence 1: C04HBa0119A16.1, from 1 to 11681, both strands analyzed. ... started at: Tue Jul 25 15:18:14 2006 EST library file: /tmp/cxgn-bacpublish-resources-TVM7Ac/sgn_ests; matching gDNA +strand ... ... found all matches, elapsed seconds = 4 ... matches indexed, elapsed seconds = 4 HitsTableSize = 38 EST library file: /tmp/cxgn-bacpublish-resources-TVM7Ac/sgn_ests; matching gDNA -strand ... ... found all matches, elapsed seconds = 4 ... matches indexed, elapsed seconds = 4 HitsTableSize = 62 ******************************************************************************** EST sequence 3 -strand 731 n (File: SGN-E578076-) 1 GCATCATCAA TCCCATTATT TTAGTTCATC ACGCCTTCTT TTATACCAAG GCCTCATTAT 61 GAACAAAGAG ATTAAGATTT TGCAAGATTT GGGATTCAAT AACTTCATCA TGCTTATATA 121 ATCACAATTA TATAGTTACA TTCATGCAAG CATACAATTA AGCACATAGC AGGGTTTACA 181 ATATTATCAA TACATATCAT TCTCTATTAA GAGTTTACTA CGAATATCGT AAGAGAAACC 241 ATAACCTACC TCCACCGAAG AATTGCGATC AACAAGTTAT CTTCTCAAAA TCCTTGCTAT 301 CCTCTTCGTT TCTCTTTCTT TTTCTGTTTT CTCTTTGTTC TTTCTATTTT TCTTATTCAA 361 ACGTCCTAAC GAGCAAAACA GAGAACAAAA CAACCCTAAA AATTTCAACT TTTTTCGGTT 421 TCCCGACTTC CAATTTACCA GAGATATAGA TAATTCACTG AAATTGAACA AGGGTTAAGA 481 GCAGAAGAAA TTTACGTTGT GATTAATTGG GGCAAAGCGT CGAACAGTTG AACTGCAAAT 541 TTGTTCTTCA GTTATAGATA CAAAAGATAG AGTCTTATAT GAGTTAAAGA AGACGTAGAG 601 TATACCCTAG TAAGCGAGCT GACCACGGCG GAATGAGGTG GTGAGTTGGT GGGTTTCGTC 661 GGTCAACCAA GAAATGAAAA GGAAATTGAA GTATGAAAAA CTACAGAAAA ATGACGCGTT 721 TGGCCGAGAA A Predicted gene structure (within gDNA segment 7990 to 1): Exon 1 5700 5330 ( 371 n); cDNA 3 363 ( 361 n); score: 0.778 Intron 1 5329 1506 (3824 n); Pd: 0.000 (s: 0.76), Pa: 0.252 (s: 0) Exon 2 1505 1476 ( 30 n); cDNA 364 394 ( 31 n); score: 0.417 Intron 2 1475 665 ( 811 n); Pd: 0.916 (s: 0), Pa: 0.000 (s: 0) Exon 3 664 643 ( 22 n); cDNA 395 416 ( 22 n); score: 0.773 MATCH C04HBa0119A16.1- SGN-E578076- 0.778 423 0.579 C PGS_C04HBa0119A16.1-_SGN-E578076- (5700 5330,1505 1476,664 643) Alignment (genomic DNA sequence = upper lines): ATCCCCTAAT CTCACTACTT TAATTCATCA AGCCTTCTTT TATACCAAGG CATCATCATT 5641 ||| | ||| | || || || || ||||||| ||||||||| |||||||||| | |||| || ATCATC-AAT CCCATTATTT TAGTTCATCA CGCCTTCTTT TATACCAAGG CCTCATTATG 61 AACAAAGTAG ATTAGGATTT CTTTTTCAAG ATTTAGGATT C-ATAGCTTC ATCATGCTTA 5582 ||||||| || |||| || |||| |||| |||| ||||| | ||| |||| |||||||||| AACAAAG-AG ATTAAGA--- -TTTTGCAAG ATTTGGGATT CAATAACTTC ATCATGCTTA 116 TTTTATCTCA ATCATATAAT CACA-ACATG CAAACACATA ATTAAGCATA TAGAAGGGTT 5523 | | ||| || || ||||| | ||| |||| ||| || | | |||||||| | ||| |||||| TATAATCACA ATTATATAGT TACATTCATG CAAGCATACA ATTAAGCACA TAGCAGGGTT 176 TACAACACTA CCCAATACAT ATCATTCTCT ATTAAGAGTT TACTACGAAT A--GT-ATAA 5466 ||||| | || |||||||| |||||||||| |||||||||| |||||||||| | || | | TACAATATTA -TCAATACAT ATCATTCTCT ATTAAGAGTT TACTACGAAT ATCGTAAGAG 235 AAACCATAAC CTACCTCCAC CGAAGAATTT TGATCCAGCA AGCAAATTTC CCAAGCTTTT 5406 |||||||||| |||||||||| ||||||||| ||| || || || | ||| ||| | | AAACCATAAC CTACCTCCAC CGAAGAATTG CGAT-CAACA AGTTATCTTC TCAAAATCCT 294 GTTTTTCCTC TTCGTTCGTC TCTCTCTAGC AATCATTTTT CCCTATCTTG TTCTTTCTAT 5346 | ||||| |||||| || ||| ||| || | ||| || | ||| |||||||||| TGCTATCCTC TTCGTT--TC TCTTTCT--T TTTC-TGTTT -TCTCT-TTG TTCTTTCTAT 347 TTTTCTTATT CAAACCATCT TTCTTTTACC CTAATTAGCA TATAATTAAG TATAAAAGAT 5286 |||||||||| ||||| TTTTCTTATT CAAACG.... .......... .......... .......... .......... 363 GAGGACTTAA CCCACTAATT AACTCAAGGT TACCTCTTTT AACCCCCAAG TAATTGAGTT 5226 .......... .......... .......... .......... .......... .......... 363 ATTAATATTA AACCACTAAC TTTATAATTA TAGCAGGAAT AGTCCAAAAC GTCCCTTAAA 5166 .......... .......... .......... .......... .......... .......... 363 ATATTTAAAG AAATCCGACC TCGCTTGGGA TTACGCAGCC TGTGACGGGC CGTCGTGCCT 5106 .......... .......... .......... .......... .......... .......... 363 GCGACGGTCT GTCCTGCTGC TCCGTCACAG AGTTCAGAGA CTCACTTTTT ATTTAAGACC 5046 .......... .......... .......... .......... .......... .......... 363 CTGTGACGGC CCGTCATGCC TGTGACGGTC CATCCTGCAC TTTTGTCACG AAGTTCAGAG 4986 .......... .......... .......... .......... .......... .......... 363 AGTTGATTTC AGTACCCAAA TTTCAGAATT TCTAAGTGTT TTGAAACGAG ACCCCCTTGA 4926 .......... .......... .......... .......... .......... .......... 363 CGGTCCGTTG TGCCCATGAC GGTCCGTCGT GGGATCCGTC GTCTCAGCCA GTTTTCCAGA 4866 .......... .......... .......... .......... .......... .......... 363 AATAACATCT GTTGCTCAAA ACGACTAAAC AGGTCGTTAC AATAGATACC AATTTACCCA 4806 .......... .......... .......... .......... .......... .......... 363 TTGTTCGTCC TCGAACGATC ATAAGAAGAA AACAAGGGCG AAAAGAAGTA CCTGAATCTG 4746 .......... .......... .......... .......... .......... .......... 363 TAAACAGGTG GGGGTATCTT TCTTGCATAT CAACCTCTTT CTCCCAAGTG GCTTCTTCAA 4686 .......... .......... .......... .......... .......... .......... 363 CGGGTCGATT CTTCCATTGA ACTTTGATGG ATGCAATCTC CCTTGACCTC AGCTTGCGAA 4626 .......... .......... .......... .......... .......... .......... 363 CTTCTCTATC TAAAATAGCA ACAGACTCCT CCTCATAAGA CAAATTTTCA TCAAGCAGCA 4566 .......... .......... .......... .......... .......... .......... 363 CTAAATCCCA ACGAATGATG TAGTTTCCAT CCCCATGGTA TCTTTTTCAC ATAGACACAT 4506 .......... .......... .......... .......... .......... .......... 363 GAAATACCGG ATGCACTCCG TACAGTCCCG GAGGCAAGGC TAACTCATAA GCCACCTCTC 4446 .......... .......... .......... .......... .......... .......... 363 CTATGCGCTT CAAAACTTCA AATGGACCAA TATACCTCGG ACTAAGTTTA CCTGGCTTAC 4386 .......... .......... .......... .......... .......... .......... 363 CAAACAACAT CACCCCTTTC ATGGGCGAAA CCTTCAACAA GACTTGTTCA CACTCCATAA 4326 .......... .......... .......... .......... .......... .......... 363 ACTCCAAGTC TCTAACCTTT CGAACGACAT ATTCCTTTTG CCTACTTTGC GCCGCCAAAA 4266 .......... .......... .......... .......... .......... .......... 363 GCTTTTCTTG AATACATTTC ACCTTCTCCA ATGAATCCCT CAAAAGGTCA ATACCCCAAG 4206 .......... .......... .......... .......... .......... .......... 363 GTCTAACCTC AAATACATCA AACCAACCGA TGGGAGACCT ACATCTCCTT CCATACAGTG 4146 .......... .......... .......... .......... .......... .......... 363 CTTCAAATGG GGCCATATCA ATACTTGAGT GATAGATATT GTTGTAGGAG AACTCCGCTA 4086 .......... .......... .......... .......... .......... .......... 363 AGGGTAAGAA GTTATCCCAA TGAACTCCAA ATTCTATCAC ACATGCACGA AGCATATCCT 4026 .......... .......... .......... .......... .......... .......... 363 CCAACACTTG AATCGTTCGC TCAGACTAAC CATCGGTCTG AGGATGGAAT GCAGTACTAA 3966 .......... .......... .......... .......... .......... .......... 363 GGTCCAACCT AGTATCTAAT TCAGCATGCA ATGTTCTCCA AAACTTAGAA GTAAACTGCG 3906 .......... .......... .......... .......... .......... .......... 363 TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACAATT TCTGAGATGT 3846 .......... .......... .......... .......... .......... .......... 363 AAATTTTGGC TAACTTCTCT GCATTATAAG TCACCTTGAC CGGAATGAAG TGAGCAGACT 3786 .......... .......... .......... .......... .......... .......... 363 TCGTTAACCT ATCGACAATC ACCCAAATGG AGTCATACTT ACTCATTGTC TTTTGAAGAC 3726 .......... .......... .......... .......... .......... .......... 363 CAACCACGAA GTCCATTGCA ATTCTCTCCC ACATCCATTT AGGAATGGGC ATTCTCTGAA 3666 .......... .......... .......... .......... .......... .......... 363 GTGTTCCTCT AGGCCTCTGG TGTTCATACT TTACTTGCTT ACAATTTGGA CATTTGGCAA 3606 .......... .......... .......... .......... .......... .......... 363 CAAAATCAAC AATGTCGCGC TTCATTCTAC TCCACCAAAA GTGTTGCTTT AGGTCACGGT 3546 .......... .......... .......... .......... .......... .......... 363 ACATCTTGGT TGCACCAGGA TGTATAGAGT ACCTTGAACT ATGAGCTTCT GCCAGAATAG 3486 .......... .......... .......... .......... .......... .......... 363 TGTTTATCAA ATCATCAACG CGGGGTACAC ATACCCTTCC CTTGATTCTC AAAACACCTT 3426 .......... .......... .......... .......... .......... .......... 363 CCTCATCGAT TTGCGCTTCC TTAGCCTCTC CTCGCAATAC TTTATCTTGG ATTCTGCTTA 3366 .......... .......... .......... .......... .......... .......... 363 GTTTCTCATC ATCAAACTAT TTTCCCTTAA TCTTGTCAAG AAAAGAAGAT CTTGCCTCCA 3306 .......... .......... .......... .......... .......... .......... 363 CACAAGCCAA CAATCCTCCC TTCTCATTTA CTTCTAACCT CATCAAGTCG TTAGCCAGAG 3246 .......... .......... .......... .......... .......... .......... 363 TCTGAACCTC TCTAGCCAAT GGACGTCTAG AAACTTGCAA GTGAGCCAGG CTTCCCATGC 3186 .......... .......... .......... .......... .......... .......... 363 TTCTTGCCTT TCTACTTAAG GTGTCTGCCA CAACATTAGC CTTTCCCGGA TGATACAAGA 3126 .......... .......... .......... .......... .......... .......... 363 TAGTGATATC GTAGTCCTTC AGTAGTTCCA TCCATCTCCT CTGTCTCAAA TTCAAATCTT 3066 .......... .......... .......... .......... .......... .......... 363 TTTGAGTAAA CACATACTGT AGGCTACGAT GATCCGTGTA TACTTCACAC TTAACCCCAT 3006 .......... .......... .......... .......... .......... .......... 363 ATAGATAGTA CCTCCATTGC TTTAAGGCAA ACACTACCGC AGCTAATTCC AAATCATGGG 2946 .......... .......... .......... .......... .......... .......... 363 TCGGATAATT ACCTTCGTGC ACATTTAATT GCCTTGAAGC ATAAGCAATT ACGTTCTTCT 2886 .......... .......... .......... .......... .......... .......... 363 CTTGCATTAG CACTGCACCC AAACCCGAAT AGGATGCATC ACAATAGACG ATGAAATGCT 2826 .......... .......... .......... .......... .......... .......... 363 TACCTTCCAC TGGCAGGGTA AGGATTAGTG CAGTAGTCAA CAAGGTCTTG AGTTTCTGAA 2766 .......... .......... .......... .......... .......... .......... 363 AGCTTTCCTC ACATTCGTCC GACCATACAA ATGGAACATT CTGTTTAGTC AAGTTCGTCA 2706 .......... .......... .......... .......... .......... .......... 363 ATTGGGAAGC AATGGAAGAG AATCCCTTGA CAAATCGACG GTAATAGCTA GCTAAACCAA 2646 .......... .......... .......... .......... .......... .......... 363 CAAAGCTCCT TATTTCTGAC ACATTAGTAG GTCTTACCCA ATTCTTTACT GTCTCAATCT 2586 .......... .......... .......... .......... .......... .......... 363 TAGAAGGATA GACCATCACC TCATCCTTAG AAACCACATT CCCCAAGAAG GACACTGCAT 2526 .......... .......... .......... .......... .......... .......... 363 CTAGCCAAAA CTCACACTTG GAGAATTTGG CATAAAGCTT TTTCTCCCTC AACATTTCCA 2466 .......... .......... .......... .......... .......... .......... 363 ATACAATTCT CAAGTGCTTC TCGTGTTCCT TCTTGCTCTT TGAGTATACC AATATATCAT 2406 .......... .......... .......... .......... .......... .......... 363 CAATAAATAC GATCACAAAG AGATCCAGAT ATGGCTTAAA AATCCCGTTC ATCAAGCTCA 2346 .......... .......... .......... .......... .......... .......... 363 TGAAAGCAGC AGGGGCATTC GTAAGACCAA AAGACATCAC TACAAATTCG TAATGCCCAT 2286 .......... .......... .......... .......... .......... .......... 363 ACCTGGTCCG AAAAGCAGTT TTTGGCACAT CCATTGCCAG TATCTTCAAT TGATGATAAC 2226 .......... .......... .......... .......... .......... .......... 363 CGAACCTCAA GTCAATCTTA GAGAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT 2166 .......... .......... .......... .......... .......... .......... 363 CAATGCGAGG AATGGGATAC TTGTTCTTAA TAGTTACCTT GTTCAACTGC CGGTAGTTTA 2106 .......... .......... .......... .......... .......... .......... 363 TGCACATCCG AAAACTCCCA TCCTTCTTCT TCACAAATAA CACTGGAGCT TCCCAAGGGG 2046 .......... .......... .......... .......... .......... .......... 363 ATGCACTTGG TCTAATGAAG CCTTTGCTTA ACAACTCTTG AAGTTAAGCT TTTAACTCTC 1986 .......... .......... .......... .......... .......... .......... 363 TTAACTCCGC GGGAGCCATT TTATAAGGGG GTATAGAAAT GGGGCGAGTA CCCGGTTCAA 1926 .......... .......... .......... .......... .......... .......... 363 GATCAATGCA GAAGTCAATA TCCCTATCTG GTGGCATACC AGGAAGATCT GCAGGGAACA 1866 .......... .......... .......... .......... .......... .......... 363 CATCCAGAAA CTCACGGACT ACCGAAACCG ACTCAATTGG AGGTACTTGG GTAGTATCAT 1806 .......... .......... .......... .......... .......... .......... 363 CTCGGAGGTG TGCCAAGAAC GCTAAACAAC CCTTACTAAC CATTTTCTTA GCACGAAGAA 1746 .......... .......... .......... .......... .......... .......... 363 AGGAGATAAT ACGAACCGGA TTGGAAGTGT AGTCACCCTC CCACACTAAT GGATCTGTAC 1686 .......... .......... .......... .......... .......... .......... 363 CAGGCTTGGC TAACGTCACG GTTTTAGCAT TGCAATCCAA GATCGCAAAA TTCGGAGAAA 1626 .......... .......... .......... .......... .......... .......... 363 GCCAAGTCAT ACCCAGAATT ACATCAAAAT CCACCATTTC TAAGATAACC AAGTCTACAT 1566 .......... .......... .......... .......... .......... .......... 363 AAGTATTGCT CCCCACAAAA GTCACCAGAC CAGACCTATA TACTTTTTCA ACTATCACAG 1506 .......... .......... .......... .......... .......... .......... 363 ACTCACCCAC CGGAGTAGA- AACACGAATA GGCATGTCAA GCAATTCACA ATGTAAATTA 1447 | | | | | | ||| |||| | | TCCTAACGAG CAAAACAGAG AACAAAACAA C......... .......... .......... 394 TGACCATTAG CAAATGAGGA AGATATATAA GAAAATGTGG ATCCAGGGTC AAATAATACA 1387 .......... .......... .......... .......... .......... .......... 394 GAAGCCATAC AATCACAAAC CAAAAGATTA CCTGTGATAA CAGCATCTGA TGTCTCCGCT 1327 .......... .......... .......... .......... .......... .......... 394 TCCGACCGCC CAGGGAAAGC GTAACAATGG GCCCTCTCAC CTGTCTGTCC GTTGCCCCTA 1267 .......... .......... .......... .......... .......... .......... 394 CCATGTTGTG ATGTAGTGGC TCCAGTTTGC CCATCACCCC GGCCGTTTTG GTGACCACCA 1207 .......... .......... .......... .......... .......... .......... 394 TTACCTCGAC CACCGCGTCC TCCAGAATGA CGGCCTCTTC CATAACCACC TCTACCTCTA 1147 .......... .......... .......... .......... .......... .......... 394 ACATTTGGAG GTCTGTAACT CTGTTTTGGA CAATACCTCT TAATGTGTCC AGTCTCCCCA 1087 .......... .......... .......... .......... .......... .......... 394 CATCCATAAC ACTTTCTGGA TTCAAGCATA GTTCTCTCAG AGAAGTGTTG ACCGGTCTGA 1027 .......... .......... .......... .......... .......... .......... 394 GGTGGACCCC CAACTACAGT CTGTAGTGAA GACTGAATTG GTCAGACTGA GTAACCTCCT 967 .......... .......... .......... .......... .......... .......... 394 GAACCCTGTC CTCTAGAGTA AGAACCATTA AACTCACCTC CCTTTCGAAA CCTTTTTGAT 907 .......... .......... .......... .......... .......... .......... 394 GTAGTTGCCA TGGTGAAGTA ATCTGGCTTC ACTTCCTCTA CCTCTATCAC GAAGTCTACC 847 .......... .......... .......... .......... .......... .......... 394 ACTTTTTGAA AAGATTTCGC TGTAGTTGCT ACCTGTAAGG CTGAAATCCG CAACTCTGAT 787 .......... .......... .......... .......... .......... .......... 394 CACAACCCCT TCACAAAACA GTGAATCCGC TCTTGTAGAC TGAAACATAG TTGGGTGGCA 727 .......... .......... .......... .......... .......... .......... 394 TACCGGGATA ATGCACGAAA CTTAGCCTCA TATGCAGTAA CCGACATCCT ACCTTGCTCT 667 .......... .......... .......... .......... .......... .......... 394 AGGCTCAAAA ATTCATCTCT TTTC 643 || |||| |||| || | |||| ..CCTAAAAA TTTCAACTTT TTTC 416 hqPGS_C04HBa0119A16.1-_SGN-E578076- (5700 5330,1505 1476,664 643) ******************************************************************************** EST sequence 80 +strand 694 n (File: SGN-E353359+) 1 TGTAGTCTAT GCACATTCAA AAACTGCCGA TCTTTACAAC AAAACCGGAG CACCCCAAGG 61 AGATGCACTT GGTCTAATGA AGCCTTTGTT CAATAACTCT TGAAGTTGTG CCTTTAACTC 121 TCTTAACTCT GCGGGAGCCA TTCTATAAGG GGGTATAAAA ATGGGGCGTG TGCCCGGTTC 181 GAGATCAATA CAGAAGTCAA TATCCCTATC CGGTGGCATA CCAGGATGAT CTGCAGGGAA 241 CACATCCATA AACTCACGAA CTACTGAAAC TGAGTCAATC GAAGGTACTT GGGTAGTGTT 301 ATCCTTGAGA TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG 361 AAAGGAGATG ATACGCACCG GATTGGAAGT GTAGTCACCC TCCTACACTA ACAGATCTGT 421 CCCAGGCTTG GCTAACGTCA CGGTTTTAGC ATTACAATCC AAGATTGCAA AATTTGGAGA 481 AAGCCAAGTC ATACCCAGAA TTACATCGAA GTCAACCATT TCTTGCAAGG ATTTTGCCGT 541 AGCCGCTACC TGTAACGCTG AAATCCGCAA CTCTGACCTC AACCCTTTCA CAAAACGACG 601 AATCCTCTCT TGTGGACTGA AACAAAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 661 AGCCTCATAT GCATTGACCT ACATCCTACC TTGC Predicted gene structure (within gDNA segment 4417 to 1): Exon 1 2064 1601 ( 464 n); cDNA 44 507 ( 464 n); score: 0.905 Intron 1 1600 857 ( 744 n); Pd: 0.000 (s: 0.96), Pa: 0.000 (s: 0.80) Exon 2 856 670 ( 187 n); cDNA 508 694 ( 187 n); score: 0.861 MATCH C04HBa0119A16.1- SGN-E353359+ 0.892 651 0.938 C PGS_C04HBa0119A16.1-_SGN-E353359+ (2064 1601,856 670) Alignment (genomic DNA sequence = upper lines): ACTGGAGCTT CCCAAGGGGA TGCACTTGGT CTAATGAAGC CTTTGCTTAA CAACTCTTGA 2005 || ||||| ||||||| || |||||||||| |||||||||| ||||| | || ||||||||| ACCGGAGCAC CCCAAGGAGA TGCACTTGGT CTAATGAAGC CTTTGTTCAA TAACTCTTGA 103 AGTTAAGCTT TTAACTCTCT TAACTCCGCG GGAGCCATTT TATAAGGGGG TATAGAAATG 1945 |||| || | |||||||||| |||||| ||| ||||||||| |||||||||| |||| ||||| AGTTGTGCCT TTAACTCTCT TAACTCTGCG GGAGCCATTC TATAAGGGGG TATAAAAATG 163 GGGCGAGTAC CCGGTTCAAG ATCAATGCAG AAGTCAATAT CCCTATCTGG TGGCATACCA 1885 ||||| || | ||||||| || |||||| ||| |||||||||| ||||||| || |||||||||| GGGCGTGTGC CCGGTTCGAG ATCAATACAG AAGTCAATAT CCCTATCCGG TGGCATACCA 223 GGAAGATCTG CAGGGAACAC ATCCAGAAAC TCACGGACTA CCGAAACCGA CTCAATTGGA 1825 ||| |||||| |||||||||| ||||| |||| ||||| |||| | ||||| || ||||| | | GGATGATCTG CAGGGAACAC ATCCATAAAC TCACGAACTA CTGAAACTGA GTCAATCGAA 283 GGTACTTGGG TAGTATCATC TCGGAGGTGT GCCAAGAACG CTAAACAACC CTTACTAACC 1765 |||||||||| |||| | ||| ||| ||| |||||||| | ||||||| || ||||||||| GGTACTTGGG TAGTGTTATC CTTGAGATGT GCCAAGAAAG CTAAACACCC TTTACTAACC 343 ATTTTCTTAG CACGAAGAAA GGAGATAATA CGAACCGGAT TGGAAGTGTA GTCACCCTCC 1705 |||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| |||||||||| ATTTTCTTAG CACGAAGAAA GGAGATGATA CGCACCGGAT TGGAAGTGTA GTCACCCTCC 403 CACACTAATG GATCTGTACC AGGCTTGGCT AACGTCACGG TTTTAGCATT GCAATCCAAG 1645 ||||||| ||||||| || |||||||||| |||||||||| |||||||||| ||||||||| TACACTAACA GATCTGTCCC AGGCTTGGCT AACGTCACGG TTTTAGCATT ACAATCCAAG 463 ATCGCAAAAT TCGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC CACCATTTCT 1585 || ||||||| | |||||||| |||||||||| |||||||||| |||| ATTGCAAAAT TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATC...... .......... 507 AAGATAACCA AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT 1525 .......... .......... .......... .......... .......... .......... 507 ACTTTTTCAA CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC 1465 .......... .......... .......... .......... .......... .......... 507 AATTCACAAT GTAAATTATG ACCATTAGCA AATGAGGAAG ATATATAAGA AAATGTGGAT 1405 .......... .......... .......... .......... .......... .......... 507 CCAGGGTCAA ATAATACAGA AGCCATACAA TCACAAACCA AAAGATTACC TGTGATAACA 1345 .......... .......... .......... .......... .......... .......... 507 GCATCTGATG TCTCCGCTTC CGACCGCCCA GGGAAAGCGT AACAATGGGC CCTCTCACCT 1285 .......... .......... .......... .......... .......... .......... 507 GTCTGTCCGT TGCCCCTACC ATGTTGTGAT GTAGTGGCTC CAGTTTGCCC ATCACCCCGG 1225 .......... .......... .......... .......... .......... .......... 507 CCGTTTTGGT GACCACCATT ACCTCGACCA CCGCGTCCTC CAGAATGACG GCCTCTTCCA 1165 .......... .......... .......... .......... .......... .......... 507 TAACCACCTC TACCTCTAAC ATTTGGAGGT CTGTAACTCT GTTTTGGACA ATACCTCTTA 1105 .......... .......... .......... .......... .......... .......... 507 ATGTGTCCAG TCTCCCCACA TCCATAACAC TTTCTGGATT CAAGCATAGT TCTCTCAGAG 1045 .......... .......... .......... .......... .......... .......... 507 AAGTGTTGAC CGGTCTGAGG TGGACCCCCA ACTACAGTCT GTAGTGAAGA CTGAATTGGT 985 .......... .......... .......... .......... .......... .......... 507 CAGACTGAGT AACCTCCTGA ACCCTGTCCT CTAGAGTAAG AACCATTAAA CTCACCTCCC 925 .......... .......... .......... .......... .......... .......... 507 TTTCGAAACC TTTTTGATGT AGTTGCCATG GTGAAGTAAT CTGGCTTCAC TTCCTCTACC 865 .......... .......... .......... .......... .......... .......... 507 TCTATCACGA AGTCTACCAC TTTTTGAAAA GATTTCGCTG TAGTTGCTAC CTGTAAGGCT 805 || |||| |||| || ||| || ||||| || | ||| ||||| |||||| ||| ........GA AGTCAACCAT TTCTTGCAAG GATTTTGCCG TAGCCGCTAC CTGTAACGCT 559 GAAATCCGCA ACTCTGATCA CAACCCCTTC ACAAAACAGT GAATCCGCTC TTGTAGACTG 745 |||||||||| ||||||| | |||||| ||| ||||||| |||||| ||| |||| ||||| GAAATCCGCA ACTCTGACCT CAACCCTTTC ACAAAACGAC GAATCCTCTC TTGTGGACTG 619 AAACATAGTT GGGTGGCATA CCGGGATAAT GCACGAAACT TAGCCTCATA TGCAGTAACC 685 ||||| |||| | |||||||| | ||||| | |||||||||| |||||||||| |||| | ||| AAACAAAGTT GAGTGGCATA TCTGGATAGT GCACGAAACT TAGCCTCATA TGCATTGACC 679 GACATCCTAC CTTGC 670 ||||||||| ||||| TACATCCTAC CTTGC 694 hqPGS_C04HBa0119A16.1-_SGN-E353359+ (2064 1601,856 670) ******************************************************************************** EST sequence 73 +strand 433 n (File: SGN-E352180+) 1 CCCTTGAAGA CCGGAGGTTT CAATTTCAAG AACTTACTGA AAAGTTCATG CTGATCATTT 61 GTCATTATAG GCCCAGTAGT CAAACGTGGA AATGTACCTA TGTGCAATGG AACATCCATG 121 CGGGGAGCCA TAGTAGCCGC ATGTTGTACT TCTGAAACCG GAGGTGTTGG CGCAGAAAAC 181 ACTGGAGGTG CTTGACCTTG ATCAGATAAA CCGCTAAGAT AAGCCAGAAC CTGATTGATC 241 ATCTCTGGGG TAGGTTGGGG TGGCATTTCC TCATTTTGCA CTTGTTCAGT TTCCCCATCC 301 TCCCCTTCTC TTATTACTTC CTCAGTCGGT GGAGGAGTCA CCGCCCTAGT ACCAGATGGG 361 CTCGGTTCTC GTTCTCTTCC TCTAGATGAC GTCCTCCCAC GACCTCTACC ACGGCCCCTT 421 GCCGCTGTTC TCC Predicted gene structure (within gDNA segment 1116 to 1): Exon 1 408 1 ( 408 n); cDNA 1 408 ( 408 n); score: 0.885 MATCH C04HBa0119A16.1- SGN-E352180+ 0.885 408 0.942 C PGS_C04HBa0119A16.1-_SGN-E352180+ (408 1) Alignment (genomic DNA sequence = upper lines): CCCTTGAAGA CTGGAGGTTT CAATTTCAAG AACTTACTGA AAAGTTCATG CTGATCATTT 349 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTTGAAGA CCGGAGGTTT CAATTTCAAG AACTTACTGA AAAGTTCATG CTGATCATTT 60 GTCATTATCG GCCCTGTAGT CAGACGAGGA AACGTACCTA TTTCCAATGA GGCATCCATG 289 |||||||| | |||| ||||| || ||| ||| || ||||||| | | ||||| |||||||| GTCATTATAG GCCCAGTAGT CAAACGTGGA AATGTACCTA TGTGCAATGG AACATCCATG 120 CGGGGAGCCA TAGTAGCCGC ATGTTGTACC TCCAGAGCCT GAGGTGCTGG TGCAGAAAAC 229 |||||||||| |||||||||| ||||||||| || | || |||||| ||| ||||||||| CGGGGAGCCA TAGTAGCCGC ATGTTGTACT TCTGAAACCG GAGGTGTTGG CGCAGAAAAC 180 ACTGGAGGTG TTTGACCTTG ATCAGATAAC CCACTAAGAT AAGTAAGGAC CTGATTTATC 169 |||||||||| ||||||||| ||||||||| || ||||||| ||| || || |||||| ||| ACTGGAGGTG CTTGACCTTG ATCAGATAAA CCGCTAAGAT AAGCCAGAAC CTGATTGATC 240 ATCTCTGGGG TAGGTTGGGG TGGTAGTTCC TCATTCTGCA CTTGCTCAGT TTCCCCTTCC 109 |||||||||| |||||||||| ||| | |||| ||||| |||| |||| ||||| |||||| ||| ATCTCTGGGG TAGGTTGGGG TGGCATTTCC TCATTTTGCA CTTGTTCAGT TTCCCCATCC 300 TCACCCTCTC TTACTACTTC TTTAGTCGGT GGAGGAGTCA CCGCCCTAGT ACTAGATGGG 49 || || |||| ||| |||||| | ||||||| |||||||||| |||||||||| || ||||||| TCCCCTTCTC TTATTACTTC CTCAGTCGGT GGAGGAGTCA CCGCCCTAGT ACCAGATGGG 360 ACGGGCGCTT GTCCTCTTCC CCTAGAGGAT GTCCTCCCAC GACCTCTA 1 || || || ||||||| ||||| || |||||||||| |||||||| CTCGGTTCTC GTTCTCTTCC TCTAGATGAC GTCCTCCCAC GACCTCTA 408 hqPGS_C04HBa0119A16.1-_SGN-E352180+ (408 1) ******************************************************************************** EST sequence 30 -strand 554 n (File: SGN-E329287-) 1 AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 61 ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 121 CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 181 ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 241 GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 301 TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 361 CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 421 GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 481 CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 541 CAGATGGGCT AGGT Predicted gene structure (within gDNA segment 1206 to 1): Exon 1 596 44 ( 553 n); cDNA 1 553 ( 553 n); score: 0.924 MATCH C04HBa0119A16.1- SGN-E329287- 0.924 553 0.998 C PGS_C04HBa0119A16.1-_SGN-E329287- (596 44) Alignment (genomic DNA sequence = upper lines): AGAATGATGC CCAAGTCATA GGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 537 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 60 ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 477 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 120 CTATACCCAT CTTGTGTAGT AGCTCATGAT AGTTAACCAA AAAATCGTAG GCATCCTCAG 417 |||||||||| |||||||||| ||||||||| ||| ||||| |||||||||| |||||||||| CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 180 ATTCAGCACC CTTGAAGACT GGAGGTTTCA ATTTCAAGAA CTTACTGAAA AGTTCATGCT 357 ||||| |||| |||| ||||| ||||||||| |||||||||| |||||| ||| |||||||||| ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 240 GATCATTTGT CATTATCGGC CCTGTAGTCA GACGAGGAAA CGTACCTATT TCCAATGAGG 297 |||||||||| |||||| ||| |||||||||| |||| ||||| ||| |||||| |||||||||| GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 300 CATCCATGCG GGGAGCCATA GTAGCCGCAT GTTGTACCTC CAGAGCCTGA GGTGCTGGTG 237 ||| ||||| ||||| || | |||| ||||| |||||||||| | |||||||| |||||| ||| TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 360 CAGAAAACAC TGGAGGTGTT TGACCTTGAT CAGATAACCC ACTAAGATAA GTAAGGACCT 177 |||||||||| |||||||| | || ||||||| |||||||||| ||||| ||| | ||| |||| CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 420 GATTTATCAT CTCTGGGGTA GGTTGGGGTG GTAGTTCCTC ATTCTGCACT TGCTCAGTTT 117 |||| ||||| |||| ||||| |||||||||| | | |||||| |||||||||| || ||| | | GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 480 CCCCTTCCTC ACCCTCTCTT ACTACTTCTT TAGTCGGTGG AGGAGTCACC GCCCTAGTAC 57 |||| ||||| |||||||||| || ||||| | ||| ||||| ||| |||||| ||| |||||| CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 540 TAGATGGGAC GGG 44 ||||||| || CAGATGGGCT AGG 553 hqPGS_C04HBa0119A16.1-_SGN-E329287- (596 44) ******************************************************************************** EST sequence 40 +strand 716 n (File: SGN-E577713+) 1 CGGTGGATAC CTAGGCACCC AGAGACGAGG AAGGGCGTAG TAATCGACGA AATGCTTCGG 61 GGAGTTGAAA ATAAGCATAG ATCCGGAGAT TCCCGAATAG GGCAACCTTT CGAACTGCTG 121 CTGAATCCAT GGGCAGGCAA GAGACAACCT GGCGAACTGA AACATCTTAG TAGCCAGAGG 181 AAAAGAAAGC AAATAAGGAA GATACATAAG AAAACGTGGA TCCAGGATCA AACAATACAG 241 AAGCCATGCA ATCACAAACC AGAAGATTAC CTGTGATGAC AACATCAGAT GCCTCCGCTT 301 CACACCGCCC AGGGAAAGCG TAACAATGGG CCCTATCGTT CGTCTGTCCG TTGCCCCTAC 361 CATGTTGTGA TGTAGTGGCC CAAGTTTGCC CATTACCTCT GCCGTTTTGG TGACCACCAT 421 TACCTCGACC ACCACGTCCT CCAGAATAAC GGCCTCTACC ATGACCACCT CTACCTCTAG 481 CTATTGGGGG TCTATAACTT TGTCTGGGAC AATTTTTCCT AATATGTCCA ATCTCCCCAC 541 ATCCATACCA TTCTCTGGAG TCAATCCTAG GCCCCTCGGA GAAGTGTTGA CCGGTCTGAG 601 GTGGTCCCCC AACTACAGTC TGTAGTGAAG ACTCAATTGG TCGGACTGAG TAACTTCCCG 661 AACCCTGTCC TCTAGTGTAA GAACCATTAA ACTCACCTCC CTTTCGAAGC CTTTTT Predicted gene structure (within gDNA segment 4952 to 228): Exon 1 1505 1476 ( 30 n); cDNA 156 185 ( 30 n); score: 0.633 Intron 1 1475 1441 ( 35 n); Pd: 0.916 (s: 0), Pa: 0.000 (s: 0.86) Exon 2 1440 910 ( 531 n); cDNA 186 716 ( 531 n); score: 0.887 MATCH C04HBa0119A16.1- SGN-E577713+ 0.887 561 0.784 C PGS_C04HBa0119A16.1-_SGN-E577713+ (1505 1476,1440 910) Alignment (genomic DNA sequence = upper lines): ACTCACCCAC CGGAGTAGAA ACACGAATAG GCATGTCAAG CAATTCACAA TGTAAATTAT 1446 ||| | || | ||||| | | ||| || ACTGAAACAT CTTAGTAGCC AGAGGAAAAG .......... .......... .......... 185 GACCATTAGC AAATGAGGAA GATATATAAG AAAATGTGGA TCCAGGGTCA AATAATACAG 1386 ||| |||| ||||| |||| ||||| |||| ||||| |||||| ||| || ||||||| .....AAAGC AAATAAGGAA GATACATAAG AAAACGTGGA TCCAGGATCA AACAATACAG 240 AAGCCATACA ATCACAAACC AAAAGATTAC CTGTGATAAC AGCATCTGAT GTCTCCGCTT 1326 ||||||| || |||||||||| | |||||||| ||||||| || | |||| ||| | |||||||| AAGCCATGCA ATCACAAACC AGAAGATTAC CTGTGATGAC AACATCAGAT GCCTCCGCTT 300 CCGACCGCCC AGGGAAAGCG TAACAATGGG CCCTCTCACC TGTCTGTCCG TTGCCCCTAC 1266 | ||||||| |||||||||| |||||||||| |||| || ||||||||| |||||||||| CACACCGCCC AGGGAAAGCG TAACAATGGG CCCTATCGTT CGTCTGTCCG TTGCCCCTAC 360 CATGTTGTGA TGTAGTGGCT CCAGTTTGCC CATCACCCCG GCCGTTTTGG TGACCACCAT 1206 |||||||||| ||||||||| | |||||||| ||| ||| | |||||||||| |||||||||| CATGTTGTGA TGTAGTGGCC CAAGTTTGCC CATTACCTCT GCCGTTTTGG TGACCACCAT 420 TACCTCGACC ACCGCGTCCT CCAGAATGAC GGCCTCTTCC ATAACCACCT CTACCTCTAA 1146 |||||||||| ||| |||||| ||||||| || ||||||| || || ||||||| ||||||||| TACCTCGACC ACCACGTCCT CCAGAATAAC GGCCTCTACC ATGACCACCT CTACCTCTAG 480 CATTTGGAGG TCTGTAACTC TGTTTTGGAC AATACCTCTT AATGTGTCCA GTCTCCCCAC 1086 | |||| || ||| ||||| ||| | |||| ||| || | ||| |||||| ||||||||| CTATTGGGGG TCTATAACTT TGTCTGGGAC AATTTTTCCT AATATGTCCA ATCTCCCCAC 540 ATCCATAACA CTTTCTGGAT TCAAGCATAG TTCTCTCAGA GAAGTGTTGA CCGGTCTGAG 1026 ||||||| || | |||||| |||| | ||| | ||| || |||||||||| |||||||||| ATCCATACCA TTCTCTGGAG TCAATCCTAG GCCCCTCGGA GAAGTGTTGA CCGGTCTGAG 600 GTGGACCCCC AACTACAGTC TGTAGTGAAG ACTGAATTGG TCAGACTGAG TAACCTCCTG 966 |||| ||||| |||||||||| |||||||||| ||| |||||| || ||||||| |||| ||| | GTGGTCCCCC AACTACAGTC TGTAGTGAAG ACTCAATTGG TCGGACTGAG TAACTTCCCG 660 AACCCTGTCC TCTAGAGTAA GAACCATTAA ACTCACCTCC CTTTCGAAAC CTTTTT 910 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||| | |||||| AACCCTGTCC TCTAGTGTAA GAACCATTAA ACTCACCTCC CTTTCGAAGC CTTTTT 716 hqPGS_C04HBa0119A16.1-_SGN-E577713+ (1505 1476,1440 910) ******************************************************************************** EST sequence 89 +strand 720 n (File: SGN-E356614+) 1 GCGAATCCGC TCTTGAGGAC TGAAACAGAG TTGAGTGGCA TATCTGGATA GTGCACGAAA 61 CTTAGCCTCA TAAGCATTAA CTGACACCCT ACCTTGCTCT AGGCTCAAGA ACTCATCCCT 121 TTTCTTATCC CTCAAAGTCC GGGGGATATA CTTCTCCATA AACAAACTAT AGAATGAGGC 181 CCAAGTCATA GGTGATGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC ACCACATTTG 241 GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA CTATACCCAT 301 CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCCG ATTCAGCACC 361 CTTGAAGACC GGAGGTTTCA ATTTCAAGAA CTTACTGAAA AGTTCATGCT GATCATTTGT 421 CATTATAGGG ACAGTAGTCA AACGTGGAAA TGTGCCTATG TCCAATGGAA CATCCATGCG 481 GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG CAGAAAACAC 541 TGGAGGTGCT TGACCTTGAT CAGATAACCC GCTAAGATAA GCCAGAACCT GATTGATCAT 601 CTCTGGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGNTCAGTTT CCCCATCCCT 661 CCCTTTCTCT ATTACTTCCT CAGTCAGTGG AAGAGTCACT GCCCTAGTAT CAGATGGGCT Predicted gene structure (within gDNA segment 1825 to 1): Exon 1 764 49 ( 716 n); cDNA 3 718 ( 716 n); score: 0.893 MATCH C04HBa0119A16.1- SGN-E356614+ 0.893 716 0.994 C PGS_C04HBa0119A16.1-_SGN-E356614+ (764 49) Alignment (genomic DNA sequence = upper lines): GAATCCGCTC TTGTAGACTG AAACATAGTT GGGTGGCATA CCGGGATAAT GCACGAAACT 705 |||||||||| ||| ||||| ||||| |||| | |||||||| | ||||| | |||||||||| GAATCCGCTC TTGAGGACTG AAACAGAGTT GAGTGGCATA TCTGGATAGT GCACGAAACT 62 TAGCCTCATA TGCAGTAACC GACATCCTAC CTTGCTCTAG GCTCAAAAAT TCATCTCTTT 645 |||||||||| ||| |||| |||| ||||| |||||||||| |||||| || ||||| |||| TAGCCTCATA AGCATTAACT GACACCCTAC CTTGCTCTAG GCTCAAGAAC TCATCCCTTT 122 TCATATCCCT CAAAGTCCGG GGGATATACT TCTCCATAAA CAAGCTAGAG AATGATGCCC 585 || ||||||| |||||||||| |||||||||| |||||||||| ||| ||| || ||||| |||| TCTTATCCCT CAAAGTCCGG GGGATATACT TCTCCATAAA CAAACTATAG AATGAGGCCC 182 AAGTCATAGG TGGTGCCTCT GTTGGTTGAC ACTCAACATG TGACCGCCAC CACATTTTGG 525 |||||||||| || ||||||| ||||||||| |||| | ||| |||||||||| ||||||| || AAGTCATAGG TGATGCCTCT ATTGGTTGAC ACTCGATATG TGACCGCCAC CACATTTGGG 242 CGTTCCCTTG AAACTGATAA GTCACAAACT CAACACCAAA CCGTTCTACT ATACCCATCT 465 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| CGTTCCCTTG AAACTGATAA GTCACAAACT CCACACCAAA CCGTTCTACT ATACCCATCT 302 TGTGTAGTAG CTCATGATAG TTAACCAAAA AATCGTAGGC ATCCTCAGAT TCAGCACCCT 405 |||||||||| ||| ||| || | ||||| || |||| || || |||||| ||| |||||||||| TGTGTAGTAG CTCGTGACAG TCAACCAGAA AATCATAAGC ATCCTCCGAT TCAGCACCCT 362 TGAAGACTGG AGGTTTCAAT TTCAAGAACT TACTGAAAAG TTCATGCTGA TCATTTGTCA 345 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGACCGG AGGTTTCAAT TTCAAGAACT TACTGAAAAG TTCATGCTGA TCATTTGTCA 422 TTATCGGCCC TGTAGTCAGA CGAGGAAACG TACCTATTTC CAATGAGGCA TCCATGCGGG 285 |||| || | ||||||| | || ||||| | | ||||| || ||||| || |||||||||| TTATAGGGAC AGTAGTCAAA CGTGGAAATG TGCCTATGTC CAATGGAACA TCCATGCGGG 482 GAGCCATAGT AGCCGCATGT TGTACCTCCA GAGCCTGAGG TGCTGGTGCA GAAAACACTG 225 |||||||||| |||||||||| ||||| || | || |||| || ||| ||| |||||||||| GAGCCATAGT AGCCGCATGT TGTACTTCTG AAACCGGAGG TGTTGGCGCA GAAAACACTG 542 GAGGTGTTTG ACCTTGATCA GATAACCCAC TAAGATAAGT AAGGACCTGA TTTATCATCT 165 |||||| ||| |||||||||| |||||||| | ||||||||| || |||||| || ||||||| GAGGTGCTTG ACCTTGATCA GATAACCCGC TAAGATAAGC CAGAACCTGA TTGATCATCT 602 CTGGGGTAGG TTGGGGTGGT AGTTCCTCAT TCTGCACTTG CTCAGTTTCC CCTTCCTCAC 105 |||||||||| ||||||||| | |||||||| | |||||||| ||||||||| || ||| | | CTGGGGTAGG TTGGGGTGGC ATTTCCTCAT TTTGCACTTG NTCAGTTTCC CCATCC-CTC 661 CCTCTCT-TA CTACTTCTTT AGTCGGTGGA GGAGTCACCG CCCTAGTACT AGATGGG 49 ||| ||| || |||||| | |||| ||||| ||||||| | |||||||| ||||||| CCTTTCTCTA TTACTTCCTC AGTCAGTGGA AGAGTCACTG CCCTAGTATC AGATGGG 718 hqPGS_C04HBa0119A16.1-_SGN-E356614+ (764 49) ******************************************************************************** EST sequence 49 +strand 664 n (File: SGN-E352401+) 1 AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 61 AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 121 CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 181 AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 241 GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 301 GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 361 GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 421 TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 481 AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 541 AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 601 TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT TTGCACTTGT TCAGTTTCCC CATCCTCCCC 661 TTCT Predicted gene structure (within gDNA segment 1795 to 1): Exon 1 763 100 ( 664 n); cDNA 1 664 ( 664 n); score: 0.897 MATCH C04HBa0119A16.1- SGN-E352401+ 0.897 664 1.000 C PGS_C04HBa0119A16.1-_SGN-E352401+ (763 100) Alignment (genomic DNA sequence = upper lines): AATCCGCTCT TGTAGACTGA AACATAGTTG GGTGGCATAC CGGGATAATG CACGAAACTT 704 |||||||||| || |||||| |||| ||||| |||||||| | ||||| || |||||||||| AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 60 AGCCTCATAT GCAGTAACCG ACATCCTACC TTGCTCTAGG CTCAAAAATT CATCTCTTTT 644 ||||||||| ||| |||| | ||| |||||| |||||||||| ||||| || | |||| ||||| AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 120 CATATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAGCTAGAGA ATGATGCCCA 584 | |||||||| |||||||||| |||||||||| |||||||||| || ||| ||| |||| ||||| CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 180 AGTCATAGGT GGTGCCTCTG TTGGTTGACA CTCAACATGT GACCGCCACC ACATTTTGGC 524 |||||||||| | ||||||| |||||||||| ||| | |||| |||||||||| |||||| ||| AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 240 GTTCCCTTGA AACTGATAAG TCACAAACTC AACACCAAAC CGTTCTACTA TACCCATCTT 464 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 300 GTGTAGTAGC TCATGATAGT TAACCAAAAA ATCGTAGGCA TCCTCAGATT CAGCACCCTT 404 |||||||||| || ||| ||| ||||| ||| ||| || ||| ||||| |||| |||||||||| GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 360 GAAGACTGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 344 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 420 TATCGGCCCT GTAGTCAGAC GAGGAAACGT ACCTATTTCC AATGAGGCAT CCATGCGGGG 284 ||| || | ||||||| || | ||||| || ||||| ||| |||| ||| |||||||||| TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 480 AGCCATAGTA GCCGCATGTT GTACCTCCAG AGCCTGAGGT GCTGGTGCAG AAAACACTGG 224 |||||||||| |||||||||| |||| || | || ||||| | ||| |||| |||||||||| AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 540 AGGTGTTTGA CCTTGATCAG ATAACCCACT AAGATAAGTA AGGACCTGAT TTATCATCTC 164 ||||| |||| |||||||||| ||||||| || |||||||| || ||||||| | |||||||| AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 600 TGGGGTAGGT TGGGGTGGTA GTT-CCTCAT TCTGCACTTG CTCAGTTTCC CCTTCCTCAC 105 |||||||||| ||||||| | || |||||| | |||||||| ||||||||| || ||||| | TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT T-TGCACTTG TTCAGTTTCC CCATCCTCCC 659 CCTCT 100 | ||| CTTCT 664 hqPGS_C04HBa0119A16.1-_SGN-E352401+ (763 100) ******************************************************************************** EST sequence 86 +strand 713 n (File: SGN-E349404+) 1 GGGGTTCTGT CCTCTAGAAT AAGAACCATT ATACTCTCCT CCCCTTCTAA ACCTCTTCGA 61 TGTCGATGTC GTGGTGAAGT CATCCGGTTT CACTCCTTCC ACCTCAATCA CAAAGTCTAC 121 CACCTCTTGA AAGGATGTTG CTGTTGCCGC TATCTGTAAG GCTGAAATCC GCAATTCTGA 181 TCTCAACCCC TTCACAAAAC GGCGGATCCG TTCTTGTGGA CTAAAACAGA GTTGGGTGGC 241 GTATCTGGAT AGTGCGCGAA ATTTAGCCTC ATACGCGTTT ACTGTCATCC TTCCCTGTTC 301 AAGACTCAAG AACTCATCCC TTTTCCTATC TCTCAAAGTC CTTGGGATAT ATTTCTCCAT 361 GAACAAACTA GAGAATGATT CCCAAGTCAT AGGTGGTGCC TCTGTTGGTT GACACTCAAC 421 ATGTGAACGC CACCACATCT TGGCGTTCCC TTGGAACTGA TAGCTCACGA ACTCGACGCC 481 AAACCTCTCT ACTATCCCCA TTTTGTGTAG TAGCTCATGA CAATCAACCA GAAAATCATA 541 AGCATCTTCA GATTCTGCAC CCTTGAAGAC TGGAGGTTTC AGTTTCAAGA ACTTACTGAA 601 AAGTTCATGT TGATCGTTTG TCATAATAGG CCCAGTAGTC AGACGTGGAA ATGTGCCTAT 661 TCCCAATGGT GCATCTATGC GGGGAGCCAT AGTAGCCGCA TGTCGTATCT CTG Predicted gene structure (within gDNA segment 2944 to 1): Exon 1 961 257 ( 705 n); cDNA 7 711 ( 705 n); score: 0.858 MATCH C04HBa0119A16.1- SGN-E349404+ 0.858 705 0.989 C PGS_C04HBa0119A16.1-_SGN-E349404+ (961 257) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GAGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAACCTTT TTGATGTAGT 902 |||||||||| || ||||||| ||||| |||| |||||| || | |||||| | | ||||| | CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 66 TGCCATGGTG AAGTAATCTG GCTTCACTTC CTCTACCTCT ATCACGAAGT CTACCACTTT 842 || | ||||| |||| ||| | | |||||| | || ||||| ||||| |||| ||||||| | TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 126 TTGAAAAGAT TTCGCTGTAG TTGCTACCTG TAAGGCTGAA ATCCGCAACT CTGATCACAA 782 |||||| ||| | ||||| | |||| ||| |||||||||| |||||||| | |||||| ||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 186 CCCCTTCACA AAACAGTGAA TCCGCTCTTG TAGACTGAAA CATAGTTGGG TGGCATACCG 722 |||||||||| |||| | | | |||| ||||| | |||| ||| || ||||||| |||| || | CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 246 GGATAATGCA CGAAACTTAG CCTCATATGC AGTAACCGAC ATCCTACCTT GCTCTAGGCT 662 ||||| ||| ||||| |||| ||||||| || | || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 306 CAAAAATTCA TCTCTTTTCA TATCCCTCAA AGTCCGGGGG ATATACTTCT CCATAAACAA 602 ||| || ||| || |||||| |||| ||||| ||||| ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 366 GCTAGAGAAT GATGCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 542 ||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 426 CCGCCACCAC ATTTTGGCGT TCCCTTGAAA CTGATAAGTC ACAAACTCAA CACCAAACCG 482 ||||||||| || ||||||| ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 486 TTCTACTATA CCCATCTTGT GTAGTAGCTC ATGATAGTTA ACCAAAAAAT CGTAGGCATC 422 |||||||| ||||| |||| |||||||||| |||| | | | |||| ||||| | || ||||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGACAATCA ACCAGAAAAT CATAAGCATC 546 CTCAGATTCA GCACCCTTGA AGACTGGAGG TTTCAATTTC AAGAACTTAC TGAAAAGTTC 362 |||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TTCAGATTCT GCACCCTTGA AGACTGGAGG TTTCAGTTTC AAGAACTTAC TGAAAAGTTC 606 ATGCTGATCA TTTGTCATTA TCGGCCCTGT AGTCAGACGA GGAAACGTAC CTATTTCCAA 302 ||| ||||| |||||||| | | ||||| || ||||||||| ||||| || | ||||| |||| ATGTTGATCG TTTGTCATAA TAGGCCCAGT AGTCAGACGT GGAAATGTGC CTATTCCCAA 666 TGAGGCATCC ATGCGGGGAG CCATAGTAGC CGCATGTTGT ACCTC 257 || ||||| |||||||||| |||||||||| ||||||| || | ||| TGGTGCATCT ATGCGGGGAG CCATAGTAGC CGCATGTCGT ATCTC 711 hqPGS_C04HBa0119A16.1-_SGN-E349404+ (961 257) ******************************************************************************** EST sequence 71 +strand 679 n (File: SGN-E351625+) 1 GGGGTTCTGT CCTCTAGAAT AAGAACCATT ATACTCTCCT CCCCTTCTAA ACCTCTTCGA 61 TGTCGATGTC GTGGTGAAGT CATCCGGTTT CACTCCTTCC ACCTCAATCA CAAAGTCTAC 121 CACCTCTTGA AAGGATGTTG CTGTTGCCGC TATCTGTAAG GCTGAAATCC GCAATTCTGA 181 TCTCAACCCC TTCACAAAAC GGCGGATCCG TTCTTGTGGA CTAAAACAGA GTTGGGTGGC 241 GTATCTGGAT AGTGCGCGAA ATTTAGCCTC ATACGCGTTT ACTGTCATCC TTCCCTGTTC 301 AAGACTCAAG AACTCATCCC TTTTCCTATC TCTCAAAGTC CTTGGGATAT ATTTCTCCAT 361 GAACAAACTA GAGAATGATT CCCAAGTCAT AGGTGGTGCC TCTGTTGGTT GACACTCAAC 421 ATGTGAACGC CACCACATCT TGGCGTTCCC TTGGAACTGA TAGCTCACGA ACTCGACGCC 481 AAACCTCTCT ACTATCCCCA TTTTGTGTAG TAGCTCATGA CAATCAACCA GAAAATCATA 541 AGCATCTTCA GATTCTGCAC CCTTGAAGAC TGGAGGTTTC AGTTTCAAGA ACTTACTGAA 601 AAGTTCATGT TGATCGTTTG TCATAATAAG CCCAGTAGTC AGACGTGGAA ATGTGCCTAT 661 TCCCAATGGT GCATCTATG Predicted gene structure (within gDNA segment 2944 to 1): Exon 1 961 289 ( 673 n); cDNA 7 679 ( 673 n); score: 0.853 MATCH C04HBa0119A16.1- SGN-E351625+ 0.853 673 0.991 C PGS_C04HBa0119A16.1-_SGN-E351625+ (961 289) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GAGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAACCTTT TTGATGTAGT 902 |||||||||| || ||||||| ||||| |||| |||||| || | |||||| | | ||||| | CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 66 TGCCATGGTG AAGTAATCTG GCTTCACTTC CTCTACCTCT ATCACGAAGT CTACCACTTT 842 || | ||||| |||| ||| | | |||||| | || ||||| ||||| |||| ||||||| | TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 126 TTGAAAAGAT TTCGCTGTAG TTGCTACCTG TAAGGCTGAA ATCCGCAACT CTGATCACAA 782 |||||| ||| | ||||| | |||| ||| |||||||||| |||||||| | |||||| ||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 186 CCCCTTCACA AAACAGTGAA TCCGCTCTTG TAGACTGAAA CATAGTTGGG TGGCATACCG 722 |||||||||| |||| | | | |||| ||||| | |||| ||| || ||||||| |||| || | CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 246 GGATAATGCA CGAAACTTAG CCTCATATGC AGTAACCGAC ATCCTACCTT GCTCTAGGCT 662 ||||| ||| ||||| |||| ||||||| || | || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 306 CAAAAATTCA TCTCTTTTCA TATCCCTCAA AGTCCGGGGG ATATACTTCT CCATAAACAA 602 ||| || ||| || |||||| |||| ||||| ||||| ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 366 GCTAGAGAAT GATGCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 542 ||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 426 CCGCCACCAC ATTTTGGCGT TCCCTTGAAA CTGATAAGTC ACAAACTCAA CACCAAACCG 482 ||||||||| || ||||||| ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 486 TTCTACTATA CCCATCTTGT GTAGTAGCTC ATGATAGTTA ACCAAAAAAT CGTAGGCATC 422 |||||||| ||||| |||| |||||||||| |||| | | | |||| ||||| | || ||||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGACAATCA ACCAGAAAAT CATAAGCATC 546 CTCAGATTCA GCACCCTTGA AGACTGGAGG TTTCAATTTC AAGAACTTAC TGAAAAGTTC 362 |||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TTCAGATTCT GCACCCTTGA AGACTGGAGG TTTCAGTTTC AAGAACTTAC TGAAAAGTTC 606 ATGCTGATCA TTTGTCATTA TCGGCCCTGT AGTCAGACGA GGAAACGTAC CTATTTCCAA 302 ||| ||||| |||||||| | | |||| || ||||||||| ||||| || | ||||| |||| ATGTTGATCG TTTGTCATAA TAAGCCCAGT AGTCAGACGT GGAAATGTGC CTATTCCCAA 666 TGAGGCATCC ATG 289 || ||||| ||| TGGTGCATCT ATG 679 hqPGS_C04HBa0119A16.1-_SGN-E351625+ (961 289) ******************************************************************************** EST sequence 93 +strand 612 n (File: SGN-E357065+) 1 GGGTTCTGTC CTCTAGAATA AGAACCATTA TACTCTCCTC CCCTTCTAAA CCTCTTCGAT 61 GTCGATGTCG TGGTGAAGTC ATCCGGTTTC ACTCCTTCCA CCTCAATCAC AAAGTCTACC 121 ACCTCTTGAA AGGATGTTGC TGTTGCCGCT ATCTGTAAGG CTGAAATCCG CAATTCTGAT 181 CTCAACCCCT TCACAAAACG GCGGATCCGT TCTTGTGGAC TAAAACAGAG TTGGGTGGCG 241 TATCTGGATA GTGCGCGAAA TTTAGCCTCA TACGCGTTTA CTGTCATCCT TCCCTGTTCA 301 AGACTCAAGA ACTCATCCCT TTTCCTATCT CTCAAAGTCC TTGGGATATA TTTCTCCATG 361 AACAAACTAG AGAATGATTC CCAAGTCATA GGTGGTGCCT CTGTTGGTTG ACACTCAACA 421 TGTGAACGCC ACCACATCTT GGCGTTCCCT TGGAACTGAT AGCTCACGAA CTCGACGCCA 481 AACCTCTCTA CTATCCCCAT TTTGTGTAGT AGCTCATGAC AATCAACCAG AAAATCATAA 541 GCATCTTCAG ATTCTGCACC CTTGAAGACT GGAGGTTTCA GTTTCAAGAA CTTACTGAAA 601 AGTCATGTTG AT Predicted gene structure (within gDNA segment 2934 to 1): Exon 1 961 354 ( 608 n); cDNA 6 612 ( 607 n); score: 0.855 MATCH C04HBa0119A16.1- SGN-E357065+ 0.855 608 0.993 C PGS_C04HBa0119A16.1-_SGN-E357065+ (961 354) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GAGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAACCTTT TTGATGTAGT 902 |||||||||| || ||||||| ||||| |||| |||||| || | |||||| | | ||||| | CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 65 TGCCATGGTG AAGTAATCTG GCTTCACTTC CTCTACCTCT ATCACGAAGT CTACCACTTT 842 || | ||||| |||| ||| | | |||||| | || ||||| ||||| |||| ||||||| | TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 125 TTGAAAAGAT TTCGCTGTAG TTGCTACCTG TAAGGCTGAA ATCCGCAACT CTGATCACAA 782 |||||| ||| | ||||| | |||| ||| |||||||||| |||||||| | |||||| ||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 185 CCCCTTCACA AAACAGTGAA TCCGCTCTTG TAGACTGAAA CATAGTTGGG TGGCATACCG 722 |||||||||| |||| | | | |||| ||||| | |||| ||| || ||||||| |||| || | CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 245 GGATAATGCA CGAAACTTAG CCTCATATGC AGTAACCGAC ATCCTACCTT GCTCTAGGCT 662 ||||| ||| ||||| |||| ||||||| || | || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 305 CAAAAATTCA TCTCTTTTCA TATCCCTCAA AGTCCGGGGG ATATACTTCT CCATAAACAA 602 ||| || ||| || |||||| |||| ||||| ||||| ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 365 GCTAGAGAAT GATGCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 542 ||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 425 CCGCCACCAC ATTTTGGCGT TCCCTTGAAA CTGATAAGTC ACAAACTCAA CACCAAACCG 482 ||||||||| || ||||||| ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 485 TTCTACTATA CCCATCTTGT GTAGTAGCTC ATGATAGTTA ACCAAAAAAT CGTAGGCATC 422 |||||||| ||||| |||| |||||||||| |||| | | | |||| ||||| | || ||||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGACAATCA ACCAGAAAAT CATAAGCATC 545 CTCAGATTCA GCACCCTTGA AGACTGGAGG TTTCAATTTC AAGAACTTAC TGAAAAGTTC 362 |||||||| |||||||||| |||||||||| ||||| |||| |||||||||| ||||||| || TTCAGATTCT GCACCCTTGA AGACTGGAGG TTTCAGTTTC AAGAACTTAC TGAAAAG-TC 604 ATGCTGAT 354 ||| |||| ATGTTGAT 612 hqPGS_C04HBa0119A16.1-_SGN-E357065+ (961 354) ******************************************************************************** EST sequence 50 +strand 524 n (File: SGN-E352365+) 1 GGGGTTCTGT CCTCTAGAAT AAGAACCATT ATACTCTCCT CCCCTTCTAA ACCTCTTCGA 61 TGTCGATGTC GTGGTGAAGT CATCCGGTTT CACTCCTTCC ACCTCAATCA CAAAGTCTAC 121 CACCTCTTGA AAGGATGTTG CTGTTGCCGC TATCTGTAAG GCTGAAATCC GCAATTCTGA 181 TCTCAACCCC TTCACAAAAC GGCGGATCCG TTCTTGTGGA CTAAAACAGA GTTGGGTGGC 241 GTATCTGGAT AGTGCGCGAA ATTTAGCCTC ATACGCGTTT ACTGTCATCC TTCCCTGTTC 301 AAGACTCAAG AACTCATCCC TTTTCCTATC TCTCAAAGTC CTTGGGATAT ATTTCTCCAT 361 GAACAAACTA GAGAATGATT CCCAAGTCAT AGGTGGTGCC TCTGTTGGTT GACACTCAAC 421 ATGTGAACGC CACCACATCT TGGCGTTCCC TTGGAACTGA TAGCTCACGA ACTCGACGCC 481 AAACCTCTCT ACTATCCCCA TTTTGTGTAG TAGCTCATGA CAAT Predicted gene structure (within gDNA segment 2944 to 1): Exon 1 961 448 ( 514 n); cDNA 7 520 ( 514 n); score: 0.850 MATCH C04HBa0119A16.1- SGN-E352365+ 0.850 514 0.981 C PGS_C04HBa0119A16.1-_SGN-E352365+ (961 448) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GAGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAACCTTT TTGATGTAGT 902 |||||||||| || ||||||| ||||| |||| |||||| || | |||||| | | ||||| | CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 66 TGCCATGGTG AAGTAATCTG GCTTCACTTC CTCTACCTCT ATCACGAAGT CTACCACTTT 842 || | ||||| |||| ||| | | |||||| | || ||||| ||||| |||| ||||||| | TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 126 TTGAAAAGAT TTCGCTGTAG TTGCTACCTG TAAGGCTGAA ATCCGCAACT CTGATCACAA 782 |||||| ||| | ||||| | |||| ||| |||||||||| |||||||| | |||||| ||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 186 CCCCTTCACA AAACAGTGAA TCCGCTCTTG TAGACTGAAA CATAGTTGGG TGGCATACCG 722 |||||||||| |||| | | | |||| ||||| | |||| ||| || ||||||| |||| || | CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 246 GGATAATGCA CGAAACTTAG CCTCATATGC AGTAACCGAC ATCCTACCTT GCTCTAGGCT 662 ||||| ||| ||||| |||| ||||||| || | || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 306 CAAAAATTCA TCTCTTTTCA TATCCCTCAA AGTCCGGGGG ATATACTTCT CCATAAACAA 602 ||| || ||| || |||||| |||| ||||| ||||| ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 366 GCTAGAGAAT GATGCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 542 ||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 426 CCGCCACCAC ATTTTGGCGT TCCCTTGAAA CTGATAAGTC ACAAACTCAA CACCAAACCG 482 ||||||||| || ||||||| ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 486 TTCTACTATA CCCATCTTGT GTAGTAGCTC ATGA 448 |||||||| ||||| |||| |||||||||| |||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGA 520 hqPGS_C04HBa0119A16.1-_SGN-E352365+ (961 448) ******************************************************************************** EST sequence 91 +strand 790 n (File: SGN-E356912+) 1 CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACTAG AAGATTACCT GTGATGACAG 61 CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTTG 121 TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC AGTTTGCCCA TTACCTCTGC 181 CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT 241 GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTGG TCCAGGACAA TTTATCCTAA 301 TATGTCCAAT CTCCCCACAT CCATAACATT CTCTGGAGTC ACTCATAGGC CCCTTGGAGA 361 AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATGGGTC 421 GAGCCGAGTA ACCTCCGGAA CCTTGTCCTC TAGAGTAAGA ACCCTTAAAC TCACCTCCCT 481 TTCGAAACCT CTTTGATGTT GATGTCGTGG TGAAGTCGTC TGGCTTCACT CCTTCCACTT 541 CTATCACAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT TGCCGCTACC TGTAAGGCCG 601 AAATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGAG AATCCGCTCT TGAGGACTGA 661 AACAGAGTTG AGTGGCATAT CCGGATAGTG CACGGAACTT AGCCTCATAA GCATTAACCG 721 ACATCCTACC TTGCTCTAGG CTCAGGAACT CATCTCTTTT CCTATCCCTC AAAGTCCGGG 781 GGATATACTT Predicted gene structure (within gDNA segment 2723 to 4): Exon 1 1403 614 ( 790 n); cDNA 1 790 ( 790 n); score: 0.875 MATCH C04HBa0119A16.1- SGN-E356912+ 0.875 790 1.000 C PGS_C04HBa0119A16.1-_SGN-E356912+ (1403 614) Alignment (genomic DNA sequence = upper lines): CAGGGTCAAA TAATACAGAA GCCATACAAT CACAAACCAA AAGATTACCT GTGATAACAG 1344 |||| ||||| ||||| ||| ||||| |||| ||||||| | |||||||||| ||||| |||| CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACTAG AAGATTACCT GTGATGACAG 60 CATCTGATGT CTCCGCTTCC GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTCTCACCTG 1284 |||| |||| ||||||||| |||||||||| |||||||||| |||||||||| || || || CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTTG 120 TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCTCC AGTTTGCCCA TCACCCCGGC 1224 |||| || || |||||||||| |||||||||| ||||||| || |||||||||| | ||| | || TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC AGTTTGCCCA TTACCTCTGC 180 CGTTTTGGTG ACCACCATTA CCTCGACCAC CGCGTCCTCC AGAATGACGG CCTCTTCCAT 1164 |||||||||| |||||||||| |||||||||| | |||||||| ||||| |||| ||||| |||| CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT 240 AACCACCTCT ACCTCTAACA TTTGGAGGTC TGTAACTCTG TTTTGGACAA TACCTCTTAA 1104 ||||||||| ||||||| | |||| |||| | ||||| | | |||||| | || ||| GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTGG TCCAGGACAA TTTATCCTAA 300 TGTGTCCAGT CTCCCCACAT CCATAACACT TTCTGGATTC AAGCATAGTT CTCTCAGAGA 1044 | |||||| | |||||||||| |||||||| | |||||| || | ||||| | || |||| TATGTCCAAT CTCCCCACAT CCATAACATT CTCTGGAGTC ACTCATAGGC CCCTTGGAGA 360 AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATTGGTC 984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATGGGTC 420 AGACTGAGTA ACCTCCTGAA CCCTGTCCTC TAGAGTAAGA ACCATTAAAC TCACCTCCCT 924 | ||||| |||||| ||| || ||||||| |||||||||| ||| |||||| |||||||||| GAGCCGAGTA ACCTCCGGAA CCTTGTCCTC TAGAGTAAGA ACCCTTAAAC TCACCTCCCT 480 TTCGAAACCT TTTTGATGTA GTTGCCATGG TGAAGTAATC TGGCTTCACT TCCTCTACCT 864 |||||||||| |||||||| | || | ||| |||||| || |||||||||| | || || | TTCGAAACCT CTTTGATGTT GATGTCGTGG TGAAGTCGTC TGGCTTCACT CCTTCCACTT 540 CTATCACGAA GTCTACCACT TTTTGAAAAG ATTTCGCTGT AGTTGCTACC TGTAAGGCTG 804 ||||||| || |||||||||| | ||| || | |||| || || | |||||| |||||||| | CTATCACAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT TGCCGCTACC TGTAAGGCCG 600 AAATCCGCAA CTCTGATCAC AACCCCTTCA CAAAACAGTG AATCCGCTCT TGTAGACTGA 744 |||||||||| ||||| | | |||||||||| |||| | | | |||||||||| || |||||| AAATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGAG AATCCGCTCT TGAGGACTGA 660 AACATAGTTG GGTGGCATAC CGGGATAATG CACGAAACTT AGCCTCATAT GCAGTAACCG 684 |||| ||||| |||||||| | ||||| || |||| ||||| ||||||||| ||| |||||| AACAGAGTTG AGTGGCATAT CCGGATAGTG CACGGAACTT AGCCTCATAA GCATTAACCG 720 ACATCCTACC TTGCTCTAGG CTCAAAAATT CATCTCTTTT CATATCCCTC AAAGTCCGGG 624 |||||||||| |||||||||| |||| || | |||||||||| | |||||||| |||||||||| ACATCCTACC TTGCTCTAGG CTCAGGAACT CATCTCTTTT CCTATCCCTC AAAGTCCGGG 780 GGATATACTT 614 |||||||||| GGATATACTT 790 hqPGS_C04HBa0119A16.1-_SGN-E356912+ (1403 614) ******************************************************************************** EST sequence 88 +strand 698 n (File: SGN-E356209+) 1 TTCAGACCGC CCAGGGAAAG CGTAACAATG GGCCCTATCG TTCGTCTGTC CGTTGCCCCT 61 ACCATGTTGT GATGTAGTGG CCCCAGTTTG CCCATTACCT CTGCCATTTT GGTGACCACC 121 ATTACCTCGA CCACCACGTC CTCCAGAATA ACGGCCTCTA CCATGACCAC CTCTACCTCT 181 AGCTATTGGG GGTCTATAAC TTTGTCTGGG ACAATTTTTC CTAATATGTC CAATCTCCCC 241 ACATCCATAA CATTCTCTGG AGTCAAGCAT AGGCCCCTCG GAGAAGTGTT AACCGGTCTG 301 AGGTGGTCTC CCAACTACAG TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC 361 CGAACCCTGT CCTCTAGTGT AAGAACCATT AAACTCACCT CCCTTCCGAA ACCTTTTTGA 421 TGTCGATGTT GTGGTGAAGT CGTCTGGCTT CACTCCTTCC ACTTCTATCA CAAAGTCTAC 481 CACTTCTTGG AAGGATTTTG CCGTTGCCGC TATCTGTAAG GACGAAATCC GCAATTCTGA 541 CCTCAACCCC TTCACAAACC GGCGAATCCG CTCTTGAGGA CTGAAACAGA GTTGAGTGGC 601 ATATCTGGAT AGTGCACGAA ACTTAGCCTC ATAAGCATTA ACCGACATCC TACCTTGCTC 661 TAGGCTCAAG AACTCATCCC TTTTCCTATC CCTCAAAG Predicted gene structure (within gDNA segment 1963 to 1): Exon 1 1327 630 ( 698 n); cDNA 1 698 ( 698 n); score: 0.877 MATCH C04HBa0119A16.1- SGN-E356209+ 0.877 698 1.000 C PGS_C04HBa0119A16.1-_SGN-E356209+ (1327 630) Alignment (genomic DNA sequence = upper lines): TTCCGACCGC CCAGGGAAAG CGTAACAATG GGCCCTCTCA CCTGTCTGTC CGTTGCCCCT 1268 ||| |||||| |||||||||| |||||||||| |||||| || ||||||| |||||||||| TTCAGACCGC CCAGGGAAAG CGTAACAATG GGCCCTATCG TTCGTCTGTC CGTTGCCCCT 60 ACCATGTTGT GATGTAGTGG CTCCAGTTTG CCCATCACCC CGGCCGTTTT GGTGACCACC 1208 |||||||||| |||||||||| | |||||||| ||||| ||| | ||| |||| |||||||||| ACCATGTTGT GATGTAGTGG CCCCAGTTTG CCCATTACCT CTGCCATTTT GGTGACCACC 120 ATTACCTCGA CCACCGCGTC CTCCAGAATG ACGGCCTCTT CCATAACCAC CTCTACCTCT 1148 |||||||||| ||||| |||| ||||||||| ||||||||| |||| ||||| |||||||||| ATTACCTCGA CCACCACGTC CTCCAGAATA ACGGCCTCTA CCATGACCAC CTCTACCTCT 180 AACATTTGGA GGTCTGTAAC TCTGTTTTGG ACAATACCTC TTAATGTGTC CAGTCTCCCC 1088 | | |||| ||||| |||| | ||| | || ||||| || |||| |||| || ||||||| AGCTATTGGG GGTCTATAAC TTTGTCTGGG ACAATTTTTC CTAATATGTC CAATCTCCCC 240 ACATCCATAA CACTTTCTGG ATTCAAGCAT AGTTCTCTCA GAGAAGTGTT GACCGGTCTG 1028 |||||||||| || | ||||| | |||||||| || | ||| |||||||||| ||||||||| ACATCCATAA CATTCTCTGG AGTCAAGCAT AGGCCCCTCG GAGAAGTGTT AACCGGTCTG 300 AGGTGGACCC CCAACTACAG TCTGTAGTGA AGACTGAATT GGTCAGACTG AGTAACCTCC 968 |||||| | | |||||||||| |||||||||| |||||||||| |||| ||||| |||||| ||| AGGTGGTCTC CCAACTACAG TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC 360 TGAACCCTGT CCTCTAGAGT AAGAACCATT AAACTCACCT CCCTTTCGAA ACCTTTTTGA 908 ||||||||| ||||||| || |||||||||| |||||||||| ||||| |||| |||||||||| CGAACCCTGT CCTCTAGTGT AAGAACCATT AAACTCACCT CCCTTCCGAA ACCTTTTTGA 420 TGTAGTTGCC ATGGTGAAGT AATCTGGCTT CACTTCCTCT ACCTCTATCA CGAAGTCTAC 848 ||| | || ||||||||| |||||||| |||| | || || ||||||| | |||||||| TGTCGATGTT GTGGTGAAGT CGTCTGGCTT CACTCCTTCC ACTTCTATCA CAAAGTCTAC 480 CACTTTTTGA AAAGATTTCG CTGTAGTTGC TACCTGTAAG GCTGAAATCC GCAACTCTGA 788 ||||| ||| || ||||| | | || | || || ||||||| | ||||||| |||| ||||| CACTTCTTGG AAGGATTTTG CCGTTGCCGC TATCTGTAAG GACGAAATCC GCAATTCTGA 540 TCACAACCCC TTCACAAAAC AGTGAATCCG CTCTTGTAGA CTGAAACATA GTTGGGTGGC 728 | ||||||| |||||||| | | ||||||| |||||| || |||||||| | |||| ||||| CCTCAACCCC TTCACAAACC GGCGAATCCG CTCTTGAGGA CTGAAACAGA GTTGAGTGGC 600 ATACCGGGAT AATGCACGAA ACTTAGCCTC ATATGCAGTA ACCGACATCC TACCTTGCTC 668 ||| | |||| | |||||||| |||||||||| ||| ||| || |||||||||| |||||||||| ATATCTGGAT AGTGCACGAA ACTTAGCCTC ATAAGCATTA ACCGACATCC TACCTTGCTC 660 TAGGCTCAAA AATTCATCTC TTTTCATATC CCTCAAAG 630 ||||||||| || ||||| | ||||| |||| |||||||| TAGGCTCAAG AACTCATCCC TTTTCCTATC CCTCAAAG 698 hqPGS_C04HBa0119A16.1-_SGN-E356209+ (1327 630) ******************************************************************************** EST sequence 67 +strand 763 n (File: SGN-E214046+) 1 ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 61 TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACAAG 121 AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA 181 ACAATGGGCC CTATAGTTTG TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC 241 AGTTTGTCCA TTACCTCTGC CGTTTTGGTG ACCACCATTG CCTCGACCAC CACGTCCTCC 301 AAAATAACGG CCTCTACCAT GACAACCTCT ACCTCTAACT ATTGGGGGTC TATAACTTGG 361 TCCGGGAAAA TTTCTCCTAA TATGTCCAAT CTCCCCACAT CCATAACATT CTCTAGAGTC 421 ACTCATAGGC CCCTCGGAGA AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTTTG 481 TAGTGAAGAC TGAATGGGTC GAACTGAGTA ACCTCCAGAA CCTTGTCCTC TAGAGTAAGA 541 ACCCTTAAAC TCATCTCCCC TTTGAAACCT CATCGATGTC GATGTCGTGG TGAAGTCGTC 601 TGGTTTCACT CCTTCCACTT CTATCAAAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT 661 TGCCGCTACC TGTAAGGGCG AAATCCGCAA TTCTGACCTC AACCCCTTCA CAACCGGCGA 721 ATCCGCTCTT GAGGGACTGA ACAGAGTTGA GTGGCATATC TGG Predicted gene structure (within gDNA segment 2254 to 1): Exon 1 1483 720 ( 764 n); cDNA 1 763 ( 763 n); score: 0.850 MATCH C04HBa0119A16.1- SGN-E214046+ 0.850 764 1.001 C PGS_C04HBa0119A16.1-_SGN-E214046+ (1483 720) Alignment (genomic DNA sequence = upper lines): ACGAATAGGC ATGTCAAGCA ATTCACAATG TAAATTATGA CCATTAGCAA ATGAGGAAGA 1424 |||||||||| || ||||| | |||||||||| |||||| || |||||||||| |||||||||| ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 60 TATATAAGAA AATGTGGATC CAGGGTCAAA TAATACAGAA GCCATACAAT CACAAACCAA 1364 || ||||||| || ||||||| |||| ||||| ||||| ||| ||||| |||| ||||||| | TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACAAG 120 AAGATTACCT GTGATAACAG CATCTGATGT CTCCGCTTCC GACCGCCCAG GGAAAGCGTA 1304 |||||||||| ||||| |||| |||| |||| |||||||| |||||||||| |||||||||| AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA 180 ACAATGGGCC CTCTCACCTG TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCTCC 1244 |||||||||| || | || | ||||| || |||||||||| ||| |||||| ||||||| || ACAATGGGCC CTATAGTTTG TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC 240 AGTTTGCCCA TCACCCCGGC CGTTTTGGTG ACCACCATTA CCTCGACCAC CGCGTCCTCC 1184 |||||| ||| | ||| | || |||||||||| ||||||||| |||||||||| | |||||||| AGTTTGTCCA TTACCTCTGC CGTTTTGGTG ACCACCATTG CCTCGACCAC CACGTCCTCC 300 AGAATGACGG CCTCTTCCAT AACCACCTCT ACCTCTAACA TTTGGAGGTC TGTAACTCTG 1124 | ||| |||| ||||| |||| || |||||| ||||||||| |||| |||| | ||||| | AAAATAACGG CCTCTACCAT GACAACCTCT ACCTCTAACT ATTGGGGGTC TATAACTTGG 360 TTTTGGACAA TACCTCTTAA TGTGTCCAGT CTCCCCACAT CCATAACACT TTCTGGATTC 1064 | ||| || | ||| ||| | |||||| | |||||||||| |||||||| | ||| || || TCCGGGAAAA TTTCTCCTAA TATGTCCAAT CTCCCCACAT CCATAACATT CTCTAGAGTC 420 AAGCATAGTT CTCTCAGAGA AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG 1004 | ||||| | ||| |||| |||||||||| |||||||||| |||||||||| ||||||| || ACTCATAGGC CCCTCGGAGA AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTTTG 480 TAGTGAAGAC TGAATTGGTC AGACTGAGTA ACCTCCTGAA CCCTGTCCTC TAGAGTAAGA 944 |||||||||| ||||| |||| |||||||| |||||| ||| || ||||||| |||||||||| TAGTGAAGAC TGAATGGGTC GAACTGAGTA ACCTCCAGAA CCTTGTCCTC TAGAGTAAGA 540 ACCATTAAAC TCACCTCCCT TTCGAAACCT TTTTGATGTA GTTGCCATGG TGAAGTAATC 884 ||| |||||| ||| ||||| || ||||||| | ||||| | || | ||| |||||| || ACCCTTAAAC TCATCTCCCC TTTGAAACCT CATCGATGTC GATGTCGTGG TGAAGTCGTC 600 TGGCTTCACT TCCTCTACCT CTATCACGAA GTCTACCACT TTTTGAAAAG ATTTCGCTGT 824 ||| |||||| | || || | |||||| || |||||||||| | ||| || | |||| || || TGGTTTCACT CCTTCCACTT CTATCAAAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT 660 AGTTGCTACC TGTAAGGCTG AAATCCGCAA CTCTGATCAC AACCCCTTCA CAAAACAGTG 764 | |||||| ||||||| | |||||||||| ||||| | | |||||||||| | || | | | TGCCGCTACC TGTAAGGGCG AAATCCGCAA TTCTGACCTC AACCCCTTCA C-AACCGGCG 719 AATCCGCTCT TG-TAGACTG AAACATAGTT GGGTGGCATA CCGGG 720 |||||||||| || ||||| |||| |||| | |||||||| | || AATCCGCTCT TGAGGGACTG -AACAGAGTT GAGTGGCATA TCTGG 763 hqPGS_C04HBa0119A16.1-_SGN-E214046+ (1483 720) ******************************************************************************** EST sequence 63 +strand 533 n (File: SGN-E353805+) 1 GGATCAACAA TACGGAAGCC ATGCAATCAC AAACTAGAAG ATTACCTGTG ATGACAGCAT 61 CAGATGCCTC CGCTTCAGAC CGCCCAGGGA AAGCGTAACA ATGGGCCCTA TCGTTTGTCT 121 GCCCATTGCC CCTACCATGT TGTGATGTAG TGGCCCCAGT TTGCCCATTA CCTCTGCCGT 181 TTTGGTGACC ACCATTACCT CGACCACCAC GTCCTCCAGA ATAACGGCCT CTACCATGAC 241 CACCTCTACC TCTAGCTATT GGGGGTCTAT AACTTGGTCC AGGACAATTT ATCCTAATAT 301 GTCCAATCTC CCCACATCCA TAACATTCTC TGGAGTCACT CATAGGCCCC TTGGAGAAGT 361 GTTGACCGGT CTGAGGTGGA CCCCCAACTA CAGTCTGTAG TGAAGACTGA ATGGGTCGAG 421 CCGAGTAACC TCCGGAACCT TGTCCTCTAA AGTAAGAACC CTTAAACTCA CCTCCCTTTC 481 GAAACCTCTT TGATGTTGAT GTCGTGGTGA AGTCGTCTGG CTTCACTCCT TCC Predicted gene structure (within gDNA segment 2693 to 1): Exon 1 1401 869 ( 533 n); cDNA 1 532 ( 532 n); score: 0.871 MATCH C04HBa0119A16.1- SGN-E353805+ 0.871 533 1.000 C PGS_C04HBa0119A16.1-_SGN-E353805+ (1401 869) Alignment (genomic DNA sequence = upper lines): GGGTCAAATA ATACAGAAGC CATACAATCA CAAACCAAAA GATTACCTGT GATAACAGCA 1342 || || || | |||| ||||| ||| |||||| ||||| | || |||||||||| ||| |||||| GGATC-AACA ATACGGAAGC CATGCAATCA CAAACTAGAA GATTACCTGT GATGACAGCA 59 TCTGATGTCT CCGCTTCCGA CCGCCCAGGG AAAGCGTAAC AATGGGCCCT CTCACCTGTC 1282 || |||| || ||||||| || |||||||||| |||||||||| |||||||||| || |||| TCAGATGCCT CCGCTTCAGA CCGCCCAGGG AAAGCGTAAC AATGGGCCCT ATCGTTTGTC 119 TGTCCGTTGC CCCTACCATG TTGTGATGTA GTGGCTCCAG TTTGCCCATC ACCCCGGCCG 1222 || || |||| |||||||||| |||||||||| ||||| |||| ||||||||| ||| | |||| TGCCCATTGC CCCTACCATG TTGTGATGTA GTGGCCCCAG TTTGCCCATT ACCTCTGCCG 179 TTTTGGTGAC CACCATTACC TCGACCACCG CGTCCTCCAG AATGACGGCC TCTTCCATAA 1162 |||||||||| |||||||||| ||||||||| |||||||||| ||| |||||| ||| |||| | TTTTGGTGAC CACCATTACC TCGACCACCA CGTCCTCCAG AATAACGGCC TCTACCATGA 239 CCACCTCTAC CTCTAACATT TGGAGGTCTG TAACTCTGTT TTGGACAATA CCTCTTAATG 1102 |||||||||| ||||| | | ||| ||||| ||||| || ||||||| || |||| CCACCTCTAC CTCTAGCTAT TGGGGGTCTA TAACTTGGTC CAGGACAATT TATCCTAATA 299 TGTCCAGTCT CCCCACATCC ATAACACTTT CTGGATTCAA GCATAGTTCT CTCAGAGAAG 1042 |||||| ||| |||||||||| |||||| | | ||||| ||| ||||| | || |||||| TGTCCAATCT CCCCACATCC ATAACATTCT CTGGAGTCAC TCATAGGCCC CTTGGAGAAG 359 TGTTGACCGG TCTGAGGTGG ACCCCCAACT ACAGTCTGTA GTGAAGACTG AATTGGTCAG 982 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||| TGTTGACCGG TCTGAGGTGG ACCCCCAACT ACAGTCTGTA GTGAAGACTG AATGGGTCGA 419 ACTGAGTAAC CTCCTGAACC CTGTCCTCTA GAGTAAGAAC CATTAAACTC ACCTCCCTTT 922 | ||||||| |||| ||||| ||||||||| ||||||||| | |||||||| |||||||||| GCCGAGTAAC CTCCGGAACC TTGTCCTCTA AAGTAAGAAC CCTTAAACTC ACCTCCCTTT 479 CGAAACCTTT TTGATGTAGT TGCCATGGTG AAGTAATCTG GCTTCACTTC CTC 869 |||||||| | ||||||| | || | ||||| |||| |||| |||||||| | || CGAAACCTCT TTGATGTTGA TGTCGTGGTG AAGTCGTCTG GCTTCACTCC TTC 532 hqPGS_C04HBa0119A16.1-_SGN-E353805+ (1401 869) ******************************************************************************** EST sequence 69 +strand 559 n (File: SGN-E244046+) 1 AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 61 AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 121 CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 181 CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 241 CTCCAGTTTG CCCATCACCT CGGCCGTTTT GGTGACCACC ATTTCCTCGA CCGCCACGTC 301 CTCCAGAATA ACGGACTCTG CCATGACCAC CTCTACCTCT AACCTTTGGA GGTCTGTAAC 361 TCTGTTTTGG ACAATATCTC TTAATATGTC CAATCTCCCC ACACCCATAG CACTCTCTGG 421 GTTCATGCAT AAGTCTCTCA GAGAAGTGTT GACCGGTCGA AGGTGGACCC CCAACTACAG 481 TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC CGAACCCTGT CCTCTAGTGT 541 AAGCACCATT AAACTCACC Predicted gene structure (within gDNA segment 2465 to 121): Exon 1 1487 929 ( 559 n); cDNA 1 559 ( 559 n); score: 0.914 MATCH C04HBa0119A16.1- SGN-E244046+ 0.914 559 1.000 C PGS_C04HBa0119A16.1-_SGN-E244046+ (1487 929) Alignment (genomic DNA sequence = upper lines): AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT ATGACCATTA GCAAATGAGG 1428 |||||||||| |||||| ||| || ||||||| |||||||| | |||||||| |||||||||| AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 60 AAGATATATA AGAAAATGTG GATCCAGGGT CAAATAATAC AGAAGCCATA CAATCACAAA 1368 |||||| ||| |||||||||| |||||||| | |||| ||||| ||||||||| |||||||||| AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 120 CCAAAAGATT ACCTGTGATA ACAGCATCTG ATGTCTCCGC TTCCGACCGC CCAGGGAAAG 1308 |||||||||| ||||||||| ||| |||| | || |||||| ||| |||||| |||||||||| CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 180 CGTAACAATG GGCCCTCTCA CCTGTCTGTC CGTTGCCCCT ACCATGTTGT GATGTAGTGG 1248 |||||||||| |||||| ||| | |||| ||||||||| |||||||||| |||||||||| CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 240 CTCCAGTTTG CCCATCACCC CGGCCGTTTT GGTGACCACC ATTACCTCGA CCACCGCGTC 1188 |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| || || |||| CTCCAGTTTG CCCATCACCT CGGCCGTTTT GGTGACCACC ATTTCCTCGA CCGCCACGTC 300 CTCCAGAATG ACGGCCTCTT CCATAACCAC CTCTACCTCT AACATTTGGA GGTCTGTAAC 1128 ||||||||| |||| |||| |||| ||||| |||||||||| ||| |||||| |||||||||| CTCCAGAATA ACGGACTCTG CCATGACCAC CTCTACCTCT AACCTTTGGA GGTCTGTAAC 360 TCTGTTTTGG ACAATACCTC TTAATGTGTC CAGTCTCCCC ACATCCATAA CACTTTCTGG 1068 |||||||||| |||||| ||| ||||| |||| || ||||||| ||| ||||| |||| ||||| TCTGTTTTGG ACAATATCTC TTAATATGTC CAATCTCCCC ACACCCATAG CACTCTCTGG 420 ATTCAAGCAT AGTTCTCTCA GAGAAGTGTT GACCGGTCTG AGGTGGACCC CCAACTACAG 1008 |||| |||| | ||||||| |||||||||| |||||||| |||||||||| |||||||||| GTTCATGCAT AAGTCTCTCA GAGAAGTGTT GACCGGTCGA AGGTGGACCC CCAACTACAG 480 TCTGTAGTGA AGACTGAATT GGTCAGACTG AGTAACCTCC TGAACCCTGT CCTCTAGAGT 948 |||||||||| |||||||||| |||| ||||| |||||| ||| ||||||||| ||||||| || TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC CGAACCCTGT CCTCTAGTGT 540 AAGAACCATT AAACTCACC 929 ||| |||||| ||||||||| AAGCACCATT AAACTCACC 559 hqPGS_C04HBa0119A16.1-_SGN-E244046+ (1487 929) ******************************************************************************** EST sequence 85 +strand 543 n (File: SGN-E355026+) 1 GAACACATCC AAAAATTCTC AAACTACCAA AACTAATTCA ATTGAGGGTA CTTGGATAGT 61 GTCATCCTTG AGATGTGCCA AGAAGGATAG ACAACCCTTA CTAACCATCT TCTGAGCACA 121 AAGAAAGGAG ATAATACGCA CCGGATTGGA AGTGTAGTCA CCCTCCCACA CTAACGGATC 181 TGTCCCAGGC TTGGCTAACG TCACCGTTTT AGCATTACAA TCCAAGATCG CAAAATTGGG 241 AGAAAGCCAA GTCATACCCA GAATTACATC AAAGTCACCC ATTTCTAAAG TAACCAAATC 301 TAGATAAGTG TTGCTCCCCA CGAAATTCAC CAAACAAGAC CTATGTACCT TTTCAACTAT 361 CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGCATG TCAAGTAATT CACAATGCAA 421 TTTTAGACCA TTAGCAAATG ATGAAGATAC ATATGAAAAC GTGGAGCCAG GGTCAAATAA 481 TACAGATGCC ATGCAATCAC AAACCAAGAG ATTACCTGTG ATAACAGCAT CAGACGCCTC 541 TGC Predicted gene structure (within gDNA segment 3280 to 1): Exon 1 1870 1328 ( 543 n); cDNA 1 543 ( 543 n); score: 0.890 MATCH C04HBa0119A16.1- SGN-E355026+ 0.890 543 1.000 C PGS_C04HBa0119A16.1-_SGN-E355026+ (1870 1328) Alignment (genomic DNA sequence = upper lines): GAACACATCC AGAAACTCAC GGACTACCGA AACCGACTCA ATTGGAGGTA CTTGGGTAGT 1811 |||||||||| | ||| || | |||||| | ||| | ||| |||| |||| ||||| |||| GAACACATCC AAAAATTCTC AAACTACCAA AACTAATTCA ATTGAGGGTA CTTGGATAGT 60 ATCATCTCGG AGGTGTGCCA AGAACGCTAA ACAACCCTTA CTAACCATTT TCTTAGCACG 1751 ||||| | || ||||||| |||| | || |||||||||| |||||||| | ||| ||||| GTCATCCTTG AGATGTGCCA AGAAGGATAG ACAACCCTTA CTAACCATCT TCTGAGCACA 120 AAGAAAGGAG ATAATACGAA CCGGATTGGA AGTGTAGTCA CCCTCCCACA CTAATGGATC 1691 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||| ||||| AAGAAAGGAG ATAATACGCA CCGGATTGGA AGTGTAGTCA CCCTCCCACA CTAACGGATC 180 TGTACCAGGC TTGGCTAACG TCACGGTTTT AGCATTGCAA TCCAAGATCG CAAAATTCGG 1631 ||| |||||| |||||||||| |||| ||||| |||||| ||| |||||||||| ||||||| || TGTCCCAGGC TTGGCTAACG TCACCGTTTT AGCATTACAA TCCAAGATCG CAAAATTGGG 240 AGAAAGCCAA GTCATACCCA GAATTACATC AAAATCCACC ATTTCTAAGA TAACCAAGTC 1571 |||||||||| |||||||||| |||||||||| ||| || || |||||||| ||||||| || AGAAAGCCAA GTCATACCCA GAATTACATC AAAGTCACCC ATTTCTAAAG TAACCAAATC 300 TACATAAGTA TTGCTCCCCA CAAAAGTCAC CAGACCAGAC CTATATACTT TTTCAACTAT 1511 || |||||| |||||||||| | ||| |||| || || |||| |||| ||| | |||||||||| TAGATAAGTG TTGCTCCCCA CGAAATTCAC CAAACAAGAC CTATGTACCT TTTCAACTAT 360 CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGCATG TCAAGCAATT CACAATGTAA 1451 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||||| || CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGCATG TCAAGTAATT CACAATGCAA 420 ATTATGACCA TTAGCAAATG AGGAAGATAT ATAAGAAAAT GTGGATCCAG GGTCAAATAA 1391 || ||||| |||||||||| | ||||||| ||| ||||| ||||| |||| |||||||||| TTTTAGACCA TTAGCAAATG ATGAAGATAC ATATGAAAAC GTGGAGCCAG GGTCAAATAA 480 TACAGAAGCC ATACAATCAC AAACCAAAAG ATTACCTGTG ATAACAGCAT CTGATGTCTC 1331 |||||| ||| || ||||||| ||||||| || |||||||||| |||||||||| | || | ||| TACAGATGCC ATGCAATCAC AAACCAAGAG ATTACCTGTG ATAACAGCAT CAGACGCCTC 540 CGC 1328 || TGC 543 hqPGS_C04HBa0119A16.1-_SGN-E355026+ (1870 1328) ******************************************************************************** EST sequence 83 +strand 761 n (File: SGN-E355244+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TCAACAATAC AGAAGCCATG 721 CAATCACAAT CGAAAGATTA CCTGTGATGA CAGCATCTAA T Predicted gene structure (within gDNA segment 3156 to 1): Exon 1 2097 1336 ( 762 n); cDNA 1 761 ( 761 n); score: 0.900 MATCH C04HBa0119A16.1- SGN-E355244+ 0.900 762 1.001 C PGS_C04HBa0119A16.1-_SGN-E355244+ (2097 1336) Alignment (genomic DNA sequence = upper lines): CGAAAACTCC CATCCTTCTT CTTCACAAAT AACACTGGAG CTTCCCAAGG GGATGCACTT 2038 || ||||||| |||||||||| ||||||||| || | |||| | ||||||| ||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATGA AGCCTTTGCT TAACAACTCT TGAAGTTAAG CTTTTAACTC TCTTAACTCC 1978 |||||||||| | |||||||| ||||||||| ||||||| | | |||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TTTTATAAGG GGGTATAGAA ATGGGGCGAG TACCCGGTTC AAGATCAATG 1918 ||||||||| || ||||||| |||||||||| |||||||| | | |||||||| |||||| || ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAGA 1858 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 240 AACTCACGGA CTACCGAAAC CGACTCAATT GGAGGTACTT GGGTAGTATC ATCTCGGAGG 1798 ||||||| || ||| |||| ||||||||| | |||||||| ||||||| || ||| ||| AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 300 TGTGCCAAGA ACGCTAAACA ACCCTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATA 1738 |||||||||| | |||||||| || |||||| |||||||||| |||||||||| ||||||||| TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 360 ATACGAACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ATGGATCTGT ACCAGGCTTG 1678 || | |||| |||||||||| |||||||||| |||||||||| | |||||||| ||||||||| ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 420 GCTAACGTCA CGGTTTTAGC ATTGCAATCC AAGATCGCAA AATTCGGAGA AAGCCAAGTC 1618 ||||| |||| | |||||||| ||| |||||| |||||||||| | | |||||| |||||||||| GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 480 ATACCCAGAA TTACATCAAA ATCCACCATT TCTAAGATAA CCAAGTCTAC ATAAGTATTG 1558 |||||||||| |||||||||| ||| |||||| |||||||||| |||| ||||| |||||| ||| ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 540 CTCCCCACAA AAGTCACCAG ACCAGACCTA TATACTTTTT CAACTATCAC AGACTCACCC 1498 |||||||||| | |||||| || ||||||| ||||| |||| |||||| ||| |||||||||| CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 600 ACCGGAGTAG AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT ATGACCATTA 1438 |||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| |||| ||| ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 660 GCAAATGAGG AAGATATATA AGAAAATGTG GATCCAGGGT CAAATAATAC AGAAGCCATA 1378 |||||||||| |||||| | |||||| ||| ||||| || || ||||| ||||||||| GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TCAACAATAC AGAAGCCATG 720 CAATCACAAA CCAAAAGATT ACCTGTGATA ACAGCATCTG AT 1336 ||||||| || | ||||||| ||||||||| ||||||||| || CAATCAC-AA TCGAAAGATT ACCTGTGATG ACAGCATCTA AT 761 hqPGS_C04HBa0119A16.1-_SGN-E355244+ (2097 1336) ******************************************************************************** EST sequence 64 +strand 331 n (File: SGN-E352716+) 1 GATCTGTCCC AGGCTTGGCT AACGTCACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 61 TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC AACCATTTCT AAGATAACCA 121 AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 181 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCATAAT 241 TTAATTTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGGTCAA 301 ATAATACAAA AGCCATGCAA TCACAAAAAA A Predicted gene structure (within gDNA segment 2852 to 547): Exon 1 1694 1364 ( 331 n); cDNA 1 331 ( 331 n); score: 0.949 MATCH C04HBa0119A16.1- SGN-E352716+ 0.949 331 1.000 C PGS_C04HBa0119A16.1-_SGN-E352716+ (1694 1364) Alignment (genomic DNA sequence = upper lines): GATCTGTACC AGGCTTGGCT AACGTCACGG TTTTAGCATT GCAATCCAAG ATCGCAAAAT 1635 ||||||| || |||||||||| |||||||| | |||||||||| ||||||||| || ||||||| GATCTGTCCC AGGCTTGGCT AACGTCACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 60 TCGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC CACCATTTCT AAGATAACCA 1575 | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC AACCATTTCT AAGATAACCA 120 AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 1515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 180 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCACAAT 1455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCATAAT 240 GTAAATTATG ACCATTAGCA AATGAGGAAG ATATATAAGA AAATGTGGAT CCAGGGTCAA 1395 ||| ||| | |||| ||||| |||||||||| ||| ||| || |||||||||| |||||||||| TTAATTTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGGTCAA 300 ATAATACAGA AGCCATACAA TCACAAACCA A 1364 |||||||| | |||||| ||| ||||||| | | ATAATACAAA AGCCATGCAA TCACAAAAAA A 331 hqPGS_C04HBa0119A16.1-_SGN-E352716+ (1694 1364) ******************************************************************************** EST sequence 17 -strand 659 n (File: SGN-E352117-) 1 CCCAAGGGGA TGCACTTGGC NTAATGAAGC CCTTACNTAA CAACTCTTGA AGTTGGGCCT 61 TTAACTCCCC CAACTCAGCG GGAGCCATTC TATAAGGGGG TATGGAAATG GGGTGATCAC 121 CCGGCTCCAG ATCAATGCAA AAGTCAATAT CCCTATCCGG TGGCATACCA GGAAGGTCTG 181 CAGGAAACAC ATCCAGAAAC TCACGGACTA TCGAAACTGA CTCAATTGAA GGTACTTGGG 241 TAGTATCATC CCTGAGGTGT GCCAAGAAAG CTAAACACCC TTTACTAACC ATTCTCTTAG 301 CACAAAGAAA GGAGATGATA CGAACTGGAG TGGAAGTGTA GTCACCCTCC CACACTAACG 361 CATCTATCTC AGGCTTGGCC AACGTTACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 421 TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTAT AGGATAACCA 481 AGTCTACATG AGTATTGCTC CCACAAATGT CACAAGACAA GACCTATACA CCTTTTCAAC 541 AATCACAGAC TCACCCACCG GAGTAGAACA CGAATAGGTA TGTCAAGCGA TTCACTATGT 601 AAATTAAGAA CAGTAGCAAA TGAGGAAGAT ACATATGAAA ATGTGGAGGC AGGATCAAA Predicted gene structure (within gDNA segment 2664 to 1): Exon 1 2054 1394 ( 661 n); cDNA 1 659 ( 659 n); score: 0.890 MATCH C04HBa0119A16.1- SGN-E352117- 0.890 661 1.003 C PGS_C04HBa0119A16.1-_SGN-E352117- (2054 1394) Alignment (genomic DNA sequence = upper lines): CCCAAGGGGA TGCACTTGGT CTAATGAAGC CTTTGCTTAA CAACTCTTGA AGTTAAGCTT 1995 |||||||||| ||||||||| ||||||||| | || | ||| |||||||||| |||| || | CCCAAGGGGA TGCACTTGGC NTAATGAAGC CCTTACNTAA CAACTCTTGA AGTTGGGCCT 60 TTAACTCTCT TAACTCCGCG GGAGCCATTT TATAAGGGGG TATAGAAATG GGGCGAGTAC 1935 ||||||| | ||||| ||| ||||||||| |||||||||| ||| |||||| ||| || || TTAACTCCCC CAACTCAGCG GGAGCCATTC TATAAGGGGG TATGGAAATG GGGTGATCAC 120 CCGGTTCAAG ATCAATGCAG AAGTCAATAT CCCTATCTGG TGGCATACCA GGAAGATCTG 1875 |||| || || ||||||||| |||||||||| ||||||| || |||||||||| ||||| |||| CCGGCTCCAG ATCAATGCAA AAGTCAATAT CCCTATCCGG TGGCATACCA GGAAGGTCTG 180 CAGGGAACAC ATCCAGAAAC TCACGGACTA CCGAAACCGA CTCAATTGGA GGTACTTGGG 1815 |||| ||||| |||||||||| |||||||||| |||||| || |||||||| | |||||||||| CAGGAAACAC ATCCAGAAAC TCACGGACTA TCGAAACTGA CTCAATTGAA GGTACTTGGG 240 TAGTATCATC TCGGAGGTGT GCCAAGAACG CTAAACAACC CTTACTAACC ATTTTCTTAG 1755 |||||||||| | ||||||| |||||||| | ||||||| || ||||||||| ||| |||||| TAGTATCATC CCTGAGGTGT GCCAAGAAAG CTAAACACCC TTTACTAACC ATTCTCTTAG 300 CACGAAGAAA GGAGATAATA CGAACCGGAT TGGAAGTGTA GTCACCCTCC CACACTAATG 1695 ||| |||||| |||||| ||| ||||| ||| |||||||||| |||||||||| |||||||| | CACAAAGAAA GGAGATGATA CGAACTGGAG TGGAAGTGTA GTCACCCTCC CACACTAACG 360 GATCTGTACC AGGCTTGGCT AACGTCACGG TTTTAGCATT GCAATCCAAG ATCGCAAAAT 1635 |||| | | ||||||||| ||||| || | |||||||||| ||||||||| || ||||||| CATCTATCTC AGGCTTGGCC AACGTTACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 420 TCGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC CACCATTTCT AAGATAACCA 1575 | ||||| || |||||||||| |||||||||| |||| || || ||||||| | | |||||||| TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTAT AGGATAACCA 480 AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 1515 ||||||||| ||||||||| |||||||| | |||| |||| ||||||||| || ||||||| AGTCTACATG AGTATTGCT- CCCACAAATG TCACAAGACA AGACCTATAC ACCTTTTCAA 539 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCACAAT 1455 | |||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||||| || CAATCACAGA CTCACCCACC GGAGTAG-AA CACGAATAGG TATGTCAAGC GATTCACTAT 598 GTAAATTATG ACCATTAGCA AATGAGGAAG ATATATAAGA AAATGTGGAT CCAGGGTCAA 1395 |||||||| | | || ||||| |||||||||| ||| ||| || ||||||||| |||| |||| GTAAATTAAG AACAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAG GCAGGATCAA 658 A 1394 | A 659 hqPGS_C04HBa0119A16.1-_SGN-E352117- (2054 1394) ******************************************************************************** EST sequence 68 +strand 661 n (File: SGN-E351414+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 G Predicted gene structure (within gDNA segment 3156 to 728): Exon 1 2097 1437 ( 661 n); cDNA 1 661 ( 661 n); score: 0.909 MATCH C04HBa0119A16.1- SGN-E351414+ 0.909 661 1.000 C PGS_C04HBa0119A16.1-_SGN-E351414+ (2097 1437) Alignment (genomic DNA sequence = upper lines): CGAAAACTCC CATCCTTCTT CTTCACAAAT AACACTGGAG CTTCCCAAGG GGATGCACTT 2038 || ||||||| |||||||||| ||||||||| || | |||| | ||||||| ||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATGA AGCCTTTGCT TAACAACTCT TGAAGTTAAG CTTTTAACTC TCTTAACTCC 1978 |||||||||| | |||||||| ||||||||| ||||||| | | |||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TTTTATAAGG GGGTATAGAA ATGGGGCGAG TACCCGGTTC AAGATCAATG 1918 ||||||||| || ||||||| |||||||||| |||||||| | | |||||||| |||||| || ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAGA 1858 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 240 AACTCACGGA CTACCGAAAC CGACTCAATT GGAGGTACTT GGGTAGTATC ATCTCGGAGG 1798 ||||||| || ||| |||| ||||||||| | |||||||| ||||||| || ||| ||| AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 300 TGTGCCAAGA ACGCTAAACA ACCCTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATA 1738 |||||||||| | |||||||| || |||||| |||||||||| |||||||||| ||||||||| TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 360 ATACGAACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ATGGATCTGT ACCAGGCTTG 1678 || | |||| |||||||||| |||||||||| |||||||||| | |||||||| ||||||||| ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 420 GCTAACGTCA CGGTTTTAGC ATTGCAATCC AAGATCGCAA AATTCGGAGA AAGCCAAGTC 1618 ||||| |||| | |||||||| ||| |||||| |||||||||| | | |||||| |||||||||| GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 480 ATACCCAGAA TTACATCAAA ATCCACCATT TCTAAGATAA CCAAGTCTAC ATAAGTATTG 1558 |||||||||| |||||||||| ||| |||||| |||||||||| |||| ||||| |||||| ||| ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 540 CTCCCCACAA AAGTCACCAG ACCAGACCTA TATACTTTTT CAACTATCAC AGACTCACCC 1498 |||||||||| | |||||| || ||||||| ||||| |||| |||||| ||| |||||||||| CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 600 ACCGGAGTAG AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT ATGACCATTA 1438 |||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| |||| ||| ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 660 G 1437 | G 661 hqPGS_C04HBa0119A16.1-_SGN-E351414+ (2097 1437) ******************************************************************************** EST sequence 47 +strand 560 n (File: SGN-E242765+) 1 TGGTTCTAGC ATTAGGACAT CATAGCTCAT TTGATTATTT CTCATCTCAT AATTAGTATT 61 TAGTATTCCC TCAATTTAAT AATTTCATTA AAGTGTTCAT AGAGACTTAT CTCTTCATTA 121 GCTTTACACT ATAAAAGGTG AGTAAGTGTT GGTAATATTT ACTTAGGCTT ATTTGCTATT 181 GAAACCGACT CAATCGAAGG TACTTGGGTA GTGTCATCAT TGAGATGTGC TAAGAAAGAT 241 AAACACCTTT TACTAATCAT TTTCTTAGCA AGAAGAAAGG AGACGATGCG GACCGGATTG 301 GAAGTGTAGT CACCCTCTCA CACTAACGGG TCTATCCCAG GCTTGGCTAA CGTCACCGTT 361 TTAGCATTAC AATCCAAGAT TGCAAATTGC GGAGAAAGCA AAGTCATACC CAGAATCACA 421 TCAAAATCAT CCATTGCCAA GATAACCAAA TCTACATAAG TGTTGCTCCC CACAAAGTTT 481 ACGACACAAG ACCTATATAC TTTTTCAACT ACCTCAGACT CACCCACCGG AGTAGAAACA 541 CGAATAGGCA TATCAAGAAA Predicted gene structure (within gDNA segment 7014 to 772): Exon 1 1846 1463 ( 384 n); cDNA 177 560 ( 384 n); score: 0.872 MATCH C04HBa0119A16.1- SGN-E242765+ 0.872 384 0.686 C PGS_C04HBa0119A16.1-_SGN-E242765+ (1846 1463) Alignment (genomic DNA sequence = upper lines): TACCGAAACC GACTCAATTG GAGGTACTTG GGTAGTATCA TCTCGGAGGT GTGCCAAGAA 1787 || |||||| |||||||| | ||||||||| |||||| ||| || ||| | |||| ||||| TATTGAAACC GACTCAATCG AAGGTACTTG GGTAGTGTCA TCATTGAGAT GTGCTAAGAA 236 CGCTAAACAA CCCTTACTAA CCATTTTCTT AGCACGAAGA AAGGAGATAA TACGAACCGG 1727 | |||||| | ||||||| ||||||||| |||| ||||| ||||||| | | || ||||| AGATAAACAC CTTTTACTAA TCATTTTCTT AGCAAGAAGA AAGGAGACGA TGCGGACCGG 296 ATTGGAAGTG TAGTCACCCT CCCACACTAA TGGATCTGTA CCAGGCTTGG CTAACGTCAC 1667 |||||||||| |||||||||| | |||||||| || ||| | |||||||||| |||||||||| ATTGGAAGTG TAGTCACCCT CTCACACTAA CGGGTCTATC CCAGGCTTGG CTAACGTCAC 356 GGTTTTAGCA TTGCAATCCA AGATCGCAAA ATTCGGAGAA AGCCAAGTCA TACCCAGAAT 1607 ||||||||| || ||||||| |||| ||||| | ||||||| ||| |||||| |||||||||| CGTTTTAGCA TTACAATCCA AGATTGCAAA TTGCGGAGAA AGCAAAGTCA TACCCAGAAT 416 TACATCAAAA TCCACCATTT CTAAGATAAC CAAGTCTACA TAAGTATTGC TCCCCACAAA 1547 ||||||||| || ||||| | |||||||| ||| |||||| ||||| |||| |||||||||| CACATCAAAA TCATCCATTG CCAAGATAAC CAAATCTACA TAAGTGTTGC TCCCCACAAA 476 AGTCACCAGA CCAGACCTAT ATACTTTTTC AACTATCACA GACTCACCCA CCGGAGTAGA 1487 | || | | | |||||||| |||||||||| ||||| | || |||||||||| |||||||||| GTTTACGACA CAAGACCTAT ATACTTTTTC AACTACCTCA GACTCACCCA CCGGAGTAGA 536 AACACGAATA GGCATGTCAA GCAA 1463 |||||||||| ||||| |||| | || AACACGAATA GGCATATCAA GAAA 560 hqPGS_C04HBa0119A16.1-_SGN-E242765+ (1846 1463) ******************************************************************************** EST sequence 82 +strand 658 n (File: SGN-E355232+) 1 TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TGTTCAGTTG TCTGTAGTCT 61 ATGCACATTC TAAAACTTCC ATCCTTCTTC TTCACAAATA AAACTGGAGC ACCCCAAGGA 121 GATGCACTTG GTCTAATGAA GACCTTGCTC AACAACTCTT GAAGTTGAGC CTTTAACTCT 181 CTTAATTCGG CGGGAGCCAT TCTATAAGGG GGTATAGAAA TGGGGCGTGT GCCTGGTTCA 241 AGATCGATAC AGAAGTCAAT ATCCCTATCT GGTGGCATAC CAGGAAGATC TGCAGGAAAC 301 ACGTCCAAAA ACTCGCGGAC TACCGAAACC GACTCAATTG AGGGTACTTG AGTAGTGTCA 361 TCCTTGAGAT GTGCCAAGAA AGCTGAACAC CCTTTACTAA CCATTTTCTT AGCACGAAGA 421 AAGGATATGA TACGCACCAG ATTGGAAGTG TAGTCACCCT CCCACACTAA CGGATCTGTC 481 CCAGGCTTGG CTAACGTCAC CGTTTTAGCA TTACAATCCA AGATCGCAAA ATTTGGAGAA 541 AGCCAAGTCA TACCCAGAAT TACATCAATG TCACCCATTT CTAAAAAACC AAATCTACAT 601 AAGTGTTGCT CCCCACGAAA TTCNACAAAA CAGAACTATG TACCTTTTCA ACTACCAC Predicted gene structure (within gDNA segment 2901 to 89): Exon 1 2166 1508 ( 659 n); cDNA 1 658 ( 658 n); score: 0.894 MATCH C04HBa0119A16.1- SGN-E355232+ 0.894 659 1.002 C PGS_C04HBa0119A16.1-_SGN-E355232+ (2166 1508) Alignment (genomic DNA sequence = upper lines): TCAATGCGAG GAATGGGATA CTTGTTCTTA ATAGTTACCT TGTTCAACTG CCGGTAGTTT 2107 |||||||||| ||| ||||| |||||||||| |||||||||| |||||| || | ||||| | TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TGTTCAGTTG TCTGTAGTCT 60 ATGCACATCC GAAAACTCCC ATCCTTCTTC TTCACAAATA ACACTGGAGC TTCCCAAGGG 2047 |||||||| | |||||| || |||||||||| |||||||||| | |||||||| ||||||| ATGCACATTC TAAAACTTCC ATCCTTCTTC TTCACAAATA AAACTGGAGC ACCCCAAGGA 120 GATGCACTTG GTCTAATGAA GCCTTTGCTT AACAACTCTT GAAGTTAAGC TTTTAACTCT 1987 |||||||||| |||||||||| | | ||||| |||||||||| |||||| ||| ||||||||| GATGCACTTG GTCTAATGAA GACCTTGCTC AACAACTCTT GAAGTTGAGC CTTTAACTCT 180 CTTAACTCCG CGGGAGCCAT TTTATAAGGG GGTATAGAAA TGGGGCGAGT ACCCGGTTCA 1927 ||||| || | |||||||||| | |||||||| |||||||||| ||||||| || || |||||| CTTAATTCGG CGGGAGCCAT TCTATAAGGG GGTATAGAAA TGGGGCGTGT GCCTGGTTCA 240 AGATCAATGC AGAAGTCAAT ATCCCTATCT GGTGGCATAC CAGGAAGATC TGCAGGGAAC 1867 ||||| || | |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| AGATCGATAC AGAAGTCAAT ATCCCTATCT GGTGGCATAC CAGGAAGATC TGCAGGAAAC 300 ACATCCAGAA ACTCACGGAC TACCGAAACC GACTCAATTG GAGGTACTTG GGTAGTATCA 1807 || |||| || |||| ||||| |||||||||| |||||||||| |||||||| ||||| ||| ACGTCCAAAA ACTCGCGGAC TACCGAAACC GACTCAATTG AGGGTACTTG AGTAGTGTCA 360 TCTCGGAGGT GTGCCAAGAA CGCTAAACAA CCCTTACTAA CCATTTTCTT AGCACGAAGA 1747 || ||| | |||||||||| ||| |||| || ||||||| |||||||||| |||||||||| TCCTTGAGAT GTGCCAAGAA AGCTGAACAC CCTTTACTAA CCATTTTCTT AGCACGAAGA 420 AAGGAGATAA TACGAACCGG ATTGGAAGTG TAGTCACCCT CCCACACTAA TGGATCTGTA 1687 ||||| || | |||| ||| | |||||||||| |||||||||| |||||||||| |||||||| AAGGATATGA TACGCACCAG ATTGGAAGTG TAGTCACCCT CCCACACTAA CGGATCTGTC 480 CCAGGCTTGG CTAACGTCAC GGTTTTAGCA TTGCAATCCA AGATCGCAAA ATTCGGAGAA 1627 |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| ||| |||||| CCAGGCTTGG CTAACGTCAC CGTTTTAGCA TTACAATCCA AGATCGCAAA ATTTGGAGAA 540 AGCCAAGTCA TACCCAGAAT TACATCAAAA TCCACCATTT CTAAGATAAC CAAGTCTACA 1567 |||||||||| |||||||||| |||||||| || |||||| |||| | ||| ||| |||||| AGCCAAGTCA TACCCAGAAT TACATCAATG TCACCCATTT CTAA-AAAAC CAAATCTACA 599 TAAGTATTGC TCCCCACAAA AGTCACCAGA CCAGACCTAT ATACTTTTTC AACTATCAC 1508 ||||| |||| ||||||| || | || || | |||| |||| ||| ||||| ||||| ||| TAAGTGTTGC TCCCCACGAA ATTCNACAAA ACAGAACTAT GTACCTTTTC AACTACCAC 658 hqPGS_C04HBa0119A16.1-_SGN-E355232+ (2166 1508) ******************************************************************************** EST sequence 87 +strand 679 n (File: SGN-E368762+) 1 GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACATC 361 CGTTGCCCGT ATTTTCAATT GATGATAACC GGATCTCAAG TCAATCTTAG AGAAGACACA 421 AGCACCTTGT AACTGATCGA ACAAGTCATC AATGCGAGGA AGTGGATACT TGTTCTTAAT 481 AGTTACCTTG TTCAACTGCC GGTAGTCTAT GCACATCCGA AAACTCCCAT CCTTCTTCTT 541 CACAAACCAA ACCGGAGCAC CCCAAGGAGA TGCACTTGGT CTAATGAAGA CTTTGCTCAA 601 AAACTCTTGA AGTTGGGCCT TTAACTCTCT TAACTCCGCG GGAGCCATTC TATAAGGGGG 661 TATAGAAATG GGGCGAGTG Predicted gene structure (within gDNA segment 3674 to 1317): Exon 1 2615 1937 ( 679 n); cDNA 1 678 ( 678 n); score: 0.923 MATCH C04HBa0119A16.1- SGN-E368762+ 0.923 679 1.000 C PGS_C04HBa0119A16.1-_SGN-E368762+ (2615 1937) Alignment (genomic DNA sequence = upper lines): GTCTTACCCA ATTCTTTACT GTCTCAATCT TAGAAGGATA GACCATCACC TCATCCTTAG 2556 |||| ||||| |||||| ||| |||||||||| || |||||| |||||||| ||||||||| GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 60 AAACCACATT CCCCAAGAAG GACACTGCAT CTAGCCAAAA CTCACACTTG GAGAATTTGG 2496 ||||||| | |||||||||| |||||||||| ||| |||||| ||||||||| ||||| |||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATAAAGCTT TTTCTCCCTC AACATTTCCA ATACAATTCT CAAGTGCTTC TCGTGTTCCT 2436 |||||||||| |||||||||| |||||||| | |||||||||| ||| |||| | || ||||||| CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AATATATCAT CAATAAATAC GATCACAAAG AGATCCAGAT 2376 |||| || || ||||||| | | |||||||| ||||||| | ||| |||||| ||||||| || TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 240 ATGGCTTAAA AATCCCGTTC ATCAAGCTCA TGAAAGCAGC AGGGGCATTC GTAAGACCAA 2316 ||||||| || |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ATGGCTT-AA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTCCG AAAAGCAGTT TTTGGCACAT 2256 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| |||||||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACAT 359 CCATTGCCAG TATCTTCAAT TGATGATAAC CGAACCTCAA GTCAATCTTA GAGAAGACAC 2196 || ||||| | ||| |||||| |||||||||| || | ||||| |||||||||| |||||||||| CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA GAGAAGACAC 419 AAGCACCTTG TAACTGATCG AACAAGTCAT CAATGCGAGG AATGGGATAC TTGTTCTTAA 2136 |||||||||| |||||||||| |||||||||| |||||||||| || |||||| |||||||||| AAGCACCTTG TAACTGATCG AACAAGTCAT CAATGCGAGG AAGTGGATAC TTGTTCTTAA 479 TAGTTACCTT GTTCAACTGC CGGTAGTTTA TGCACATCCG AAAACTCCCA TCCTTCTTCT 2076 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| TAGTTACCTT GTTCAACTGC CGGTAGTCTA TGCACATCCG AAAACTCCCA TCCTTCTTCT 539 TCACAAATAA CACTGGAGCT TCCCAAGGGG ATGCACTTGG TCTAATGAAG CCTTTGCTTA 2016 ||||||| | || ||||| ||||||| | |||||||||| |||||||||| ||||||| | TCACAAACCA AACCGGAGCA CCCCAAGGAG ATGCACTTGG TCTAATGAAG ACTTTGCTCA 599 ACAACTCTTG AAGTTAAGCT TTTAACTCTC TTAACTCCGC GGGAGCCATT TTATAAGGGG 1956 | |||||||| ||||| || |||||||||| |||||||||| |||||||||| ||||||||| AAAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCCGC GGGAGCCATT CTATAAGGGG 659 GTATAGAAAT GGGGCGAGT 1937 |||||||||| ||||||||| GTATAGAAAT GGGGCGAGT 678 hqPGS_C04HBa0119A16.1-_SGN-E368762+ (2615 1937) ******************************************************************************** EST sequence 48 +strand 712 n (File: SGN-E379315+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTNCACTG CCGGTAGCCT ATGCACATCC GAAAACTCCA 601 ATCCTTCTTC TTTACAAACA AAACCGGAGC ACCCCAAGGA GATGCAGTTG GTCTAATGAA 661 GCCTTTGCTC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG Predicted gene structure (within gDNA segment 3619 to 1): Exon 1 2686 1974 ( 713 n); cDNA 1 712 ( 712 n); score: 0.902 MATCH C04HBa0119A16.1- SGN-E379315+ 0.902 713 1.001 C PGS_C04HBa0119A16.1-_SGN-E379315+ (2686 1974) Alignment (genomic DNA sequence = upper lines): GAATCCCTTG ACAAATCGAC GGTAATAGCT AGCTAAACCA ACAAAGCTCC TTATTTCTGA 2627 |||||||||| |||||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 60 CACATTAGTA GGTCTTACCC AATTCTTTAC TGTCTCAATC TTAGAAGGAT AGACCATCAC 2567 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||| CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 120 CTCATCCTTA GAAACCACAT TCCCCAAGAA GGACACTGCA TCTAGCCAAA ACTCACACTT 2507 |||||||| |||||||| | |||||||||| ||||||| || |||||||||| |||||||||| TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 180 GGAGAATTTG GCATAAAGCT TTTTCTCCCT CAACATTTCC AATACAATTC TCAAGTGCTT 2447 ||||| ||| ||||||| || |||||||||| |||||||||| ||||| |||| |||| |||| AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 240 CTCGTGTTCC TTCTTGCTCT TTGAGTATAC CAATATATCA TCAATAAATA CGATCACAAA 2387 || |||||| | ||| || | | ||||||| || ||||||| |||||||||| |||||||||| TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 300 GAGATCCAGA TATGGCTTAA AAATCCCGTT CATCAAGCTC ATGAAAGCAG CAGGGGCATT 2327 |||||||| | |||||||||| ||||||| || || || ||| || || |||| |||||||||| GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 360 CGTAAGACCA AAAGACATCA CTACAAATTC GTAATGCCCA TACCTGGTCC GAAAAGCAGT 2267 | |||||||| |||||||||| ||||||||| |||||||||| |||||||| | ||||||||| CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 420 TTTTGGCACA TCCATTGCCA GTATCTTCAA TTGATGATAA CCGAACCTCA AGTCAATCTT 2207 ||||||||| ||| ||||| |||| ||||| |||||||||| ||| | |||| |||||||||| CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 480 AGAGAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TCAATGCGAG GAATGGGATA 2147 ||| |||||| |||||||||| |||||||||| |||||||||| | |||||||| ||| ||||| AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 540 CTTGTTCTTA ATAGTTACCT TGTTCAACTG CCGGTAGTTT ATGCACATCC GAAAACTCCC 2087 ||||||||| || ||||||| |||| |||| ||||||| | |||||||||| ||||||||| CTTGTTCTTT ATGGTTACCT TGTTNCACTG CCGGTAGCCT ATGCACATCC GAAAACTCCA 600 ATCCTTCTTC TTCACAAATA ACACTGGAGC TTCCCAAGGG GATGCACTTG GTCTAATGAA 2027 |||||||||| || ||||| | | || ||||| ||||||| |||||| ||| |||||||||| ATCCTTCTTC TTTACAAACA AAACCGGAGC ACCCCAAGGA GATGCAGTTG GTCTAATGAA 660 GCCTTTGCTT AACAACTCTT GAAGTTAAGC TTTTAACTCT CTTAACTCCG CGG 1974 |||||||| | ||||||||| | | | |||||||||| |||||||| | ||| GCCTTTGC-T CACAACTCTT TGAAGTGGTC TTTTAACTCT CTTAACTCTG CGG 712 hqPGS_C04HBa0119A16.1-_SGN-E379315+ (2686 1974) ******************************************************************************** EST sequence 62 +strand 596 n (File: SGN-E375319+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTCAACTG CCGGTAGCCT ATGCACATCC GAAAAC Predicted gene structure (within gDNA segment 3619 to 1481): Exon 1 2686 2091 ( 596 n); cDNA 1 596 ( 596 n); score: 0.918 MATCH C04HBa0119A16.1- SGN-E375319+ 0.918 596 1.000 C PGS_C04HBa0119A16.1-_SGN-E375319+ (2686 2091) Alignment (genomic DNA sequence = upper lines): GAATCCCTTG ACAAATCGAC GGTAATAGCT AGCTAAACCA ACAAAGCTCC TTATTTCTGA 2627 |||||||||| |||||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 60 CACATTAGTA GGTCTTACCC AATTCTTTAC TGTCTCAATC TTAGAAGGAT AGACCATCAC 2567 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||| CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 120 CTCATCCTTA GAAACCACAT TCCCCAAGAA GGACACTGCA TCTAGCCAAA ACTCACACTT 2507 |||||||| |||||||| | |||||||||| ||||||| || |||||||||| |||||||||| TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 180 GGAGAATTTG GCATAAAGCT TTTTCTCCCT CAACATTTCC AATACAATTC TCAAGTGCTT 2447 ||||| ||| ||||||| || |||||||||| |||||||||| ||||| |||| |||| |||| AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 240 CTCGTGTTCC TTCTTGCTCT TTGAGTATAC CAATATATCA TCAATAAATA CGATCACAAA 2387 || |||||| | ||| || | | ||||||| || ||||||| |||||||||| |||||||||| TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 300 GAGATCCAGA TATGGCTTAA AAATCCCGTT CATCAAGCTC ATGAAAGCAG CAGGGGCATT 2327 |||||||| | |||||||||| ||||||| || || || ||| || || |||| |||||||||| GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 360 CGTAAGACCA AAAGACATCA CTACAAATTC GTAATGCCCA TACCTGGTCC GAAAAGCAGT 2267 | |||||||| |||||||||| ||||||||| |||||||||| |||||||| | ||||||||| CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 420 TTTTGGCACA TCCATTGCCA GTATCTTCAA TTGATGATAA CCGAACCTCA AGTCAATCTT 2207 ||||||||| ||| ||||| |||| ||||| |||||||||| ||| | |||| |||||||||| CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 480 AGAGAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TCAATGCGAG GAATGGGATA 2147 ||| |||||| |||||||||| |||||||||| |||||||||| | |||||||| ||| ||||| AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 540 CTTGTTCTTA ATAGTTACCT TGTTCAACTG CCGGTAGTTT ATGCACATCC GAAAAC 2091 ||||||||| || ||||||| |||||||||| ||||||| | |||||||||| |||||| CTTGTTCTTT ATGGTTACCT TGTTCAACTG CCGGTAGCCT ATGCACATCC GAAAAC 596 hqPGS_C04HBa0119A16.1-_SGN-E375319+ (2686 2091) ******************************************************************************** EST sequence 54 +strand 526 n (File: SGN-E204434+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATG Predicted gene structure (within gDNA segment 3619 to 1506): Exon 1 2686 2161 ( 526 n); cDNA 1 526 ( 526 n); score: 0.918 MATCH C04HBa0119A16.1- SGN-E204434+ 0.918 526 1.000 C PGS_C04HBa0119A16.1-_SGN-E204434+ (2686 2161) Alignment (genomic DNA sequence = upper lines): GAATCCCTTG ACAAATCGAC GGTAATAGCT AGCTAAACCA ACAAAGCTCC TTATTTCTGA 2627 |||||||||| |||||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 60 CACATTAGTA GGTCTTACCC AATTCTTTAC TGTCTCAATC TTAGAAGGAT AGACCATCAC 2567 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||| CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 120 CTCATCCTTA GAAACCACAT TCCCCAAGAA GGACACTGCA TCTAGCCAAA ACTCACACTT 2507 |||||||| |||||||| | |||||||||| ||||||| || |||||||||| |||||||||| TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 180 GGAGAATTTG GCATAAAGCT TTTTCTCCCT CAACATTTCC AATACAATTC TCAAGTGCTT 2447 ||||| ||| ||||||| || |||||||||| |||||||||| ||||| |||| |||| |||| AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 240 CTCGTGTTCC TTCTTGCTCT TTGAGTATAC CAATATATCA TCAATAAATA CGATCACAAA 2387 || |||||| | ||| || | | ||||||| || ||||||| |||||||||| |||||||||| TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 300 GAGATCCAGA TATGGCTTAA AAATCCCGTT CATCAAGCTC ATGAAAGCAG CAGGGGCATT 2327 |||||||| | |||||||||| ||||||| || || || ||| || || |||| |||||||||| GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 360 CGTAAGACCA AAAGACATCA CTACAAATTC GTAATGCCCA TACCTGGTCC GAAAAGCAGT 2267 | |||||||| |||||||||| ||||||||| |||||||||| |||||||| | ||||||||| CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 420 TTTTGGCACA TCCATTGCCA GTATCTTCAA TTGATGATAA CCGAACCTCA AGTCAATCTT 2207 ||||||||| ||| ||||| |||| ||||| |||||||||| ||| | |||| |||||||||| CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 480 AGAGAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TCAATG 2161 ||| |||||| |||||||||| |||||||||| |||||||||| | |||| AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATG 526 hqPGS_C04HBa0119A16.1-_SGN-E204434+ (2686 2161) ******************************************************************************** EST sequence 95 +strand 358 n (File: SGN-E240817+) 1 GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACA Predicted gene structure (within gDNA segment 3674 to 1449): Exon 1 2615 2257 ( 359 n); cDNA 1 358 ( 358 n); score: 0.900 MATCH C04HBa0119A16.1- SGN-E240817+ 0.900 359 1.003 C PGS_C04HBa0119A16.1-_SGN-E240817+ (2615 2257) Alignment (genomic DNA sequence = upper lines): GTCTTACCCA ATTCTTTACT GTCTCAATCT TAGAAGGATA GACCATCACC TCATCCTTAG 2556 |||| ||||| ||||| ||| |||||||||| || ||||| |||||||| ||||||||| GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 60 AAACCACATT CCCCAAGAAG GACACTGCAT CTAGCCAAAA CTCACACTTG GAGAATTTGG 2496 ||||||| | |||||||||| |||||||||| ||| |||||| ||||||||| ||||| |||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATAAAGCTT TTTCTCCCTC AACATTTCCA ATACAATTCT CAAGTGCTTC TCGTGTTCCT 2436 |||||||||| |||||||||| |||||||| | |||||||||| ||| |||| | || ||||||| CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AATATATCAT CAATAAATAC GATCACAAAG AGATCCAGAT 2376 |||| || || ||| ||| | | |||||||| |||| || | ||| || || ||||||| || TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 240 ATGGCTTAAA AATCCCGTTC ATCAAGCTCA TGAAAGCAGC AGGGGCATTC GTAAGACCAA 2316 ||||||| || |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ATGGCTT-AA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTCCG AAAAGCAGTT TTTGGCACA 2257 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACA 358 hqPGS_C04HBa0119A16.1-_SGN-E240817+ (2615 2257) ******************************************************************************** EST sequence 75 +strand 587 n (File: SGN-E352950+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTGC Predicted gene structure (within gDNA segment 4658 to 486): Exon 1 3498 2914 ( 585 n); cDNA 3 587 ( 585 n); score: 0.877 MATCH C04HBa0119A16.1- SGN-E352950+ 0.877 585 0.997 C PGS_C04HBa0119A16.1-_SGN-E352950+ (3498 2914) Alignment (genomic DNA sequence = upper lines): TCTGCCAGAA TAGTGTTTAT CAAATCATCA ACGCGGGGTA CACATACCCT TCCCTTGATT 3439 |||| |||| |||||| || |||||| || | ||||||| |||||||| | |||||| || TCTGTAAGAA TAGTGTGAAT CAAATCGTCG GCACGGGGTA CACATACCTT TCCCTTAATC 62 CTCAAAACAC CTTCCTCATC GATTTGCGCT TCCTTAGCCT CTCCTCGCAA TACTTTATCT 3379 |||||||||| |||||| ||| ||||| ||| || ||||||| ||||||||| ||| |||||| CTCAAAACAC CTTCCTTATC GATTTTTGCT TCTTTAGCCT CTCCTCGCAT TACCTTATCT 122 TGGATTCTGC TTAGTTTCTC ATCATCAAAC TATTTTCCCT TAATCTTGTC AAGAAAAGAA 3319 | || | | | |||||||| ||| |||| | ||||| | ||||||| || |||||| ||| CGAATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 182 GATCTTGCCT CCACACAAGC CAACAATCCT CCCTTCTCAT TTACTTCTAA CCTCATCAAG 3259 |||||||||| |||||||||| ||| ||| || |||||||||| ||| ||||| |||||| | | GATCTTGCCT CCACACAAGC CAAAAATTCT CCCTTCTCAT TTAATTCTAG CCTCATAAGG 242 TCGTTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGACGTC TAGAAACTTG CAAGTGAGCC 3199 || ||||||| |||||||||| |||||||||| ||||| | || ||||||| || ||||||||| TCATTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGGCATC TAGAAACCTG CAAGTGAGCT 302 AGGCTTCCCA TGCTTCTTGC CTTTCTACTT AAGGTGTCTG CCACAACATT AGCCTTTCCC 3139 || ||||||| |||| | ||| |||||||||| || | |||| |||||||||| |||||||||| AGACTTCCCA TGCTCCCTGC CTTTCTACTT AAAGCATCTG CCACAACATT AGCCTTTCCC 362 GGATGATACA AGATAGTGAT ATCGTAGTCC TTCAGTAGTT CCATCCATCT CCTCTGTCTC 3079 |||||||||| |||||||||| ||| |||||| |||||||| | ||||| |||| |||||||||| GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGCT CCATCGATCT CCTCTGTCTC 422 AAATTCAAAT CTTTTTGAGT AAACACATAC TGTAGGCTAC GATGATCCGT GTATACTTCA 3019 |||||||||| |||| ||||| ||| |||||| |||| |||| |||||||| | || |||||| AAATTCAAAT CTTTCTGAGT AAAGACATAC TGTAAACTAC GATGATCCAT ATAGACTTCA 482 CACTTAACCC CATATAGATA GTACCTCCAT TGCTTTAAGG CAAACACTAC CGCAGCTAAT 2959 |||||||||| |||| ||||| | ||| || | |||||| | ||| |||||| || ||||| CACTTAACCC CATAGAGATA ATGTCTCTAT TACTTTAATG CAATCACTAC TGCCGCTAAC 542 TCCAAATCAT GGGTCGGATA ATTACCTTCG TGCACATTTA ATTGC 2914 |||||||||| |||||||||| ||||| ||| ||||| |||| ||||| TCCAAATCAT GGGTCGGATA ATTACGTTCA TGCACCTTTA ATTGC 587 hqPGS_C04HBa0119A16.1-_SGN-E352950+ (3498 2914) ******************************************************************************** EST sequence 92 +strand 587 n (File: SGN-E357100+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTGC Predicted gene structure (within gDNA segment 4658 to 486): Exon 1 3498 2914 ( 585 n); cDNA 3 587 ( 585 n); score: 0.877 MATCH C04HBa0119A16.1- SGN-E357100+ 0.877 585 0.997 C PGS_C04HBa0119A16.1-_SGN-E357100+ (3498 2914) Alignment (genomic DNA sequence = upper lines): TCTGCCAGAA TAGTGTTTAT CAAATCATCA ACGCGGGGTA CACATACCCT TCCCTTGATT 3439 |||| |||| |||||| || |||||| || | ||||||| |||||||| | |||||| || TCTGTAAGAA TAGTGTGAAT CAAATCGTCG GCACGGGGTA CACATACCTT TCCCTTAATC 62 CTCAAAACAC CTTCCTCATC GATTTGCGCT TCCTTAGCCT CTCCTCGCAA TACTTTATCT 3379 |||||||||| |||||| ||| ||||| ||| || ||||||| ||||||||| ||| |||||| CTCAAAACAC CTTCCTTATC GATTTTTGCT TCTTTAGCCT CTCCTCGCAT TACCTTATCT 122 TGGATTCTGC TTAGTTTCTC ATCATCAAAC TATTTTCCCT TAATCTTGTC AAGAAAAGAA 3319 | || | | | |||||||| ||| |||| | ||||| | ||||||| || |||||| ||| CGAATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 182 GATCTTGCCT CCACACAAGC CAACAATCCT CCCTTCTCAT TTACTTCTAA CCTCATCAAG 3259 |||||||||| |||||||||| ||| ||| || |||||||||| ||| ||||| |||||| | | GATCTTGCCT CCACACAAGC CAAAAATTCT CCCTTCTCAT TTAATTCTAG CCTCATAAGG 242 TCGTTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGACGTC TAGAAACTTG CAAGTGAGCC 3199 || ||||||| |||||||||| |||||||||| ||||| | || ||||||| || ||||||||| TCATTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGGCATC TAGAAACCTG CAAGTGAGCT 302 AGGCTTCCCA TGCTTCTTGC CTTTCTACTT AAGGTGTCTG CCACAACATT AGCCTTTCCC 3139 || ||||||| |||| | ||| |||||||||| || | |||| |||||||||| |||||||||| AGACTTCCCA TGCTCCCTGC CTTTCTACTT AAAGCATCTG CCACAACATT AGCCTTTCCC 362 GGATGATACA AGATAGTGAT ATCGTAGTCC TTCAGTAGTT CCATCCATCT CCTCTGTCTC 3079 |||||||||| |||||||||| ||| |||||| |||||||| | ||||| |||| |||||||||| GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGCT CCATCGATCT CCTCTGTCTC 422 AAATTCAAAT CTTTTTGAGT AAACACATAC TGTAGGCTAC GATGATCCGT GTATACTTCA 3019 |||||||||| |||| ||||| ||| |||||| |||| |||| |||||||| | || |||||| AAATTCAAAT CTTTCTGAGT AAAGACATAC TGTAAACTAC GATGATCCAT ATAGACTTCA 482 CACTTAACCC CATATAGATA GTACCTCCAT TGCTTTAAGG CAAACACTAC CGCAGCTAAT 2959 |||||||||| |||| ||||| | ||| || | |||||| | ||| |||||| || ||||| CACTTAACCC CATAGAGATA ATGTCTCTAT TACTTTAATG CAATCACTAC TGCCGCTAAC 542 TCCAAATCAT GGGTCGGATA ATTACCTTCG TGCACATTTA ATTGC 2914 |||||||||| |||||||||| ||||| ||| ||||| |||| ||||| TCCAAATCAT GGGTCGGATA ATTACGTTCA TGCACCTTTA ATTGC 587 hqPGS_C04HBa0119A16.1-_SGN-E357100+ (3498 2914) ******************************************************************************** EST sequence 65 +strand 554 n (File: SGN-E352647+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAA CCCATAGAGA TAATGGCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGG Predicted gene structure (within gDNA segment 4658 to 816): Exon 1 3498 2947 ( 552 n); cDNA 3 554 ( 552 n); score: 0.873 MATCH C04HBa0119A16.1- SGN-E352647+ 0.873 552 0.996 C PGS_C04HBa0119A16.1-_SGN-E352647+ (3498 2947) Alignment (genomic DNA sequence = upper lines): TCTGCCAGAA TAGTGTTTAT CAAATCATCA ACGCGGGGTA CACATACCCT TCCCTTGATT 3439 |||| |||| |||||| || |||||| || | ||||||| |||||||| | |||||| || TCTGTAAGAA TAGTGTGAAT CAAATCGTCG GCACGGGGTA CACATACCTT TCCCTTAATC 62 CTCAAAACAC CTTCCTCATC GATTTGCGCT TCCTTAGCCT CTCCTCGCAA TACTTTATCT 3379 |||||||||| |||||| ||| ||||| ||| || ||||||| ||||||||| ||| |||||| CTCAAAACAC CTTCCTTATC GATTTTTGCT TCTTTAGCCT CTCCTCGCAT TACCTTATCT 122 TGGATTCTGC TTAGTTTCTC ATCATCAAAC TATTTTCCCT TAATCTTGTC AAGAAAAGAA 3319 | || | | | |||||||| ||| |||| | ||||| | ||||||| || |||||| ||| CGAATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 182 GATCTTGCCT CCACACAAGC CAACAATCCT CCCTTCTCAT TTACTTCTAA CCTCATCAAG 3259 |||||||||| |||||||||| ||| ||| || |||||||||| ||| ||||| |||||| | | GATCTTGCCT CCACACAAGC CAAAAATTCT CCCTTCTCAT TTAATTCTAG CCTCATAAGG 242 TCGTTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGACGTC TAGAAACTTG CAAGTGAGCC 3199 || ||||||| |||||||||| |||||||||| ||||| | || ||||||| || ||||||||| TCATTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGGCATC TAGAAACCTG CAAGTGAGCT 302 AGGCTTCCCA TGCTTCTTGC CTTTCTACTT AAGGTGTCTG CCACAACATT AGCCTTTCCC 3139 || ||||||| |||| | ||| |||||||||| || | |||| |||||||||| |||||||||| AGACTTCCCA TGCTCCCTGC CTTTCTACTT AAAGCATCTG CCACAACATT AGCCTTTCCC 362 GGATGATACA AGATAGTGAT ATCGTAGTCC TTCAGTAGTT CCATCCATCT CCTCTGTCTC 3079 |||||||||| |||||||||| ||| |||||| |||||||| | ||||| |||| |||||||||| GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGCT CCATCGATCT CCTCTGTCTC 422 AAATTCAAAT CTTTTTGAGT AAACACATAC TGTAGGCTAC GATGATCCGT GTATACTTCA 3019 |||||||||| |||| ||||| ||| |||||| |||| |||| |||||||| | || |||||| AAATTCAAAT CTTTCTGAGT AAAGACATAC TGTAAACTAC GATGATCCAT ATAGACTTCA 482 CACTTAACCC CATATAGATA GTACCTCCAT TGCTTTAAGG CAAACACTAC CGCAGCTAAT 2959 ||||||| || |||| ||||| | ||| || | |||||| | ||| |||||| || ||||| CACTTAAACC CATAGAGATA ATGGCTCTAT TACTTTAATG CAATCACTAC TGCCGCTAAC 542 TCCAAATCAT GG 2947 |||||||||| || TCCAAATCAT GG 554 hqPGS_C04HBa0119A16.1-_SGN-E352647+ (3498 2947) ******************************************************************************** EST sequence 74 +strand 542 n (File: SGN-E353207+) 1 TCGGCATGTA CTGTTTTCCA AAACTTAGAA GTAAATTGCG TACCTCTATC TGATATGATG 61 GAGAGTGGAA CTCCGTGCAA TCGAACAATT TCTAAGATGT AAAGTTTGGC TAACTTCTCT 121 GCATTGTAAG TCACCTTAAC CGAAATAGAG TGAGCAGACT TAGTTAATCT GTCAACAATC 181 ACCCAAATAG AGTCATACCT ACCCATCGTC TTTGGATGAC TAACCACGAA GTCCATTGCA 241 ATTCTCTCCC ACTTCCATTC AGGAATGGGC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 301 TGTTCATACT TTACTTGCTG ACAATTCGGG CATTGAGCAA CAAAATTAAC AATGTCACGC 361 TTCATCCTAC TCCACCAAAA ATGTTGCTTT AGGTCACGAT ACATCTTGTT TGCACCAGGA 421 TGTATAGAGT ACTTCGAACT ATGAGCCTAT ATAAGAATAG TGTGAATCAA ATCATCGACG 481 CGGGGTACAC ATACTCCTTC CCTTATTCTC AAAACACCTT CCTCATCGAT TTTTGCTTCT 541 TT Predicted gene structure (within gDNA segment 4689 to 2704): Exon 1 3945 3404 ( 542 n); cDNA 1 542 ( 542 n); score: 0.898 MATCH C04HBa0119A16.1- SGN-E353207+ 0.898 542 1.000 C PGS_C04HBa0119A16.1-_SGN-E353207+ (3945 3404) Alignment (genomic DNA sequence = upper lines): TCAGCATGCA ATGTTCTCCA AAACTTAGAA GTAAACTGCG TACCTCTATC TGATATGATG 3886 || ||||| | |||| |||| |||||||||| ||||| |||| |||||||||| |||||||||| TCGGCATGTA CTGTTTTCCA AAACTTAGAA GTAAATTGCG TACCTCTATC TGATATGATG 60 GAGAGTGGAA CTCCATGCAA TCGAACAATT TCTGAGATGT AAATTTTGGC TAACTTCTCT 3826 |||||||||| |||| ||||| |||||||||| ||| |||||| ||| |||||| |||||||||| GAGAGTGGAA CTCCGTGCAA TCGAACAATT TCTAAGATGT AAAGTTTGGC TAACTTCTCT 120 GCATTATAAG TCACCTTGAC CGGAATGAAG TGAGCAGACT TCGTTAACCT ATCGACAATC 3766 ||||| |||| ||||||| || || ||| || |||||||||| | ||||| || || |||||| GCATTGTAAG TCACCTTAAC CGAAATAGAG TGAGCAGACT TAGTTAATCT GTCAACAATC 180 ACCCAAATGG AGTCATACTT ACTCATTGTC TTTTGAAGAC CAACCACGAA GTCCATTGCA 3706 |||||||| | |||||||| | || ||| ||| ||| || ||| ||||||||| |||||||||| ACCCAAATAG AGTCATACCT ACCCATCGTC TTTGGATGAC TAACCACGAA GTCCATTGCA 240 ATTCTCTCCC ACATCCATTT AGGAATGGGC ATTCTCTGAA GTGTTCCTCT AGGCCTCTGG 3646 |||||||||| || |||||| |||||||||| |||||||||| |||| |||| |||||||||| ATTCTCTCCC ACTTCCATTC AGGAATGGGC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 300 TGTTCATACT TTACTTGCTT ACAATTTGGA CATTTGGCAA CAAAATCAAC AATGTCGCGC 3586 |||||||||| ||||||||| |||||| || |||| |||| |||||| ||| |||||| ||| TGTTCATACT TTACTTGCTG ACAATTCGGG CATTGAGCAA CAAAATTAAC AATGTCACGC 360 TTCATTCTAC TCCACCAAAA GTGTTGCTTT AGGTCACGGT ACATCTTGGT TGCACCAGGA 3526 ||||| |||| |||||||||| ||||||||| |||||||| | |||||||| | |||||||||| TTCATCCTAC TCCACCAAAA ATGTTGCTTT AGGTCACGAT ACATCTTGTT TGCACCAGGA 420 TGTATAGAGT ACCTTGAACT ATGAGCTTCT GCCAGAATAG TGTTTATCAA ATCATCAACG 3466 |||||||||| || | ||||| |||||| | | ||||||| ||| ||||| |||||| ||| TGTATAGAGT ACTTCGAACT ATGAGCCTAT ATAAGAATAG TGTGAATCAA ATCATCGACG 480 CGGGGTACAC ATAC-CCTTC CCTTGATTCT CAAAACACCT TCCTCATCGA TTTGCGCTTC 3407 |||||||||| |||| ||||| |||| ||||| |||||||||| |||||||||| ||| ||||| CGGGGTACAC ATACTCCTTC CCTT-ATTCT CAAAACACCT TCCTCATCGA TTTTTGCTTC 539 CTT 3404 || TTT 542 hqPGS_C04HBa0119A16.1-_SGN-E353207+ (3945 3404) ******************************************************************************** EST sequence 37 +strand 654 n (File: SGN-E578131+) 1 GTAAACTGCA TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACGATT 61 TCTGAGATAT AGATTCTGAC TAACTTCTCT ACATTGTAGG TCACCTTGAC CGGAATGCAA 121 TGAGCAGACT TAGTCAATCT GTCAACAATT ACACAAATGG AGTCATACTT ACCCATTGTC 181 TTTGGAAGGC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGGC 241 ATTCTCTGAA GTGTCCGTCC AGGCCTTTGC TGTTCATACT TTACATGCTG ACCATTCGGT 301 TAGAAATGCT AATGGACGCT ACTTTCCCAC TAGTTCAAAA TTTGTGAAGC CACGGGCTTG 361 CTTGAAGATT GGTCTTGGTC TCTTAACAAA ACAGATCCGC TGATATGTTT CTAATTATGC 421 AGAGGATTTT GCAAGAAAGA GTTGTTAGTA GCCGGGAAGC TGAACTCAAT AGATTGAAGC 481 AGGAGAGACG AGAAAGGATC AGCCAGATAA TTCAATCAAG GAAGCAGGAG AGGGAAGCTA 541 AGAGGAAAAT GTTATTCTTT CTGCGAACTG AGGAGGAGCG TCAAAAGAGG TTACTGGAAG 601 AGGAGGAAGC CCGCAAACGT GAAGGTTCTC CTGTGGGAAG CCGGACTTGC TAAG Predicted gene structure (within gDNA segment 4605 to 1): Exon 1 3915 3616 ( 300 n); cDNA 1 300 ( 300 n); score: 0.890 Intron 1 3615 1491 (2125 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0) Exon 2 1490 1478 ( 13 n); cDNA 301 313 ( 13 n); score: 0.769 MATCH C04HBa0119A16.1- SGN-E578131+ 0.890 313 0.479 C PGS_C04HBa0119A16.1-_SGN-E578131+ (3915 3616,1490 1478) Alignment (genomic DNA sequence = upper lines): GTAAACTGCG TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACAATT 3856 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| GTAAACTGCA TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACGATT 60 TCTGAGATGT AAATTTTGGC TAACTTCTCT GCATTATAAG TCACCTTGAC CGGAATGAAG 3796 |||||||| | | ||| || | |||||||||| |||| || | |||||||||| ||||||| | TCTGAGATAT AGATTCTGAC TAACTTCTCT ACATTGTAGG TCACCTTGAC CGGAATGCAA 120 TGAGCAGACT TCGTTAACCT ATCGACAATC ACCCAAATGG AGTCATACTT ACTCATTGTC 3736 |||||||||| | || || || || ||||| || ||||||| |||||||||| || ||||||| TGAGCAGACT TAGTCAATCT GTCAACAATT ACACAAATGG AGTCATACTT ACCCATTGTC 180 TTTTGAAGAC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACATCCATTT AGGAATGGGC 3676 ||| |||| | |||||||||| |||||||||| |||||||||| || |||||| |||||||||| TTTGGAAGGC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGGC 240 ATTCTCTGAA GTGTTCCTCT AGGCCTCTGG TGTTCATACT TTACTTGCTT ACAATTTGGA 3616 |||||||||| |||| | || |||||| || |||||||||| |||| |||| || ||| || ATTCTCTGAA GTGTCCGTCC AGGCCTTTGC TGTTCATACT TTACATGCTG ACCATTCGGT 300 CATTTGGCAA CAAAATCAAC AATGTCGCGC TTCATTCTAC TCCACCAAAA GTGTTGCTTT 3556 .......... .......... .......... .......... .......... .......... 300 AGGTCACGGT ACATCTTGGT TGCACCAGGA TGTATAGAGT ACCTTGAACT ATGAGCTTCT 3496 .......... .......... .......... .......... .......... .......... 300 GCCAGAATAG TGTTTATCAA ATCATCAACG CGGGGTACAC ATACCCTTCC CTTGATTCTC 3436 .......... .......... .......... .......... .......... .......... 300 AAAACACCTT CCTCATCGAT TTGCGCTTCC TTAGCCTCTC CTCGCAATAC TTTATCTTGG 3376 .......... .......... .......... .......... .......... .......... 300 ATTCTGCTTA GTTTCTCATC ATCAAACTAT TTTCCCTTAA TCTTGTCAAG AAAAGAAGAT 3316 .......... .......... .......... .......... .......... .......... 300 CTTGCCTCCA CACAAGCCAA CAATCCTCCC TTCTCATTTA CTTCTAACCT CATCAAGTCG 3256 .......... .......... .......... .......... .......... .......... 300 TTAGCCAGAG TCTGAACCTC TCTAGCCAAT GGACGTCTAG AAACTTGCAA GTGAGCCAGG 3196 .......... .......... .......... .......... .......... .......... 300 CTTCCCATGC TTCTTGCCTT TCTACTTAAG GTGTCTGCCA CAACATTAGC CTTTCCCGGA 3136 .......... .......... .......... .......... .......... .......... 300 TGATACAAGA TAGTGATATC GTAGTCCTTC AGTAGTTCCA TCCATCTCCT CTGTCTCAAA 3076 .......... .......... .......... .......... .......... .......... 300 TTCAAATCTT TTTGAGTAAA CACATACTGT AGGCTACGAT GATCCGTGTA TACTTCACAC 3016 .......... .......... .......... .......... .......... .......... 300 TTAACCCCAT ATAGATAGTA CCTCCATTGC TTTAAGGCAA ACACTACCGC AGCTAATTCC 2956 .......... .......... .......... .......... .......... .......... 300 AAATCATGGG TCGGATAATT ACCTTCGTGC ACATTTAATT GCCTTGAAGC ATAAGCAATT 2896 .......... .......... .......... .......... .......... .......... 300 ACGTTCTTCT CTTGCATTAG CACTGCACCC AAACCCGAAT AGGATGCATC ACAATAGACG 2836 .......... .......... .......... .......... .......... .......... 300 ATGAAATGCT TACCTTCCAC TGGCAGGGTA AGGATTAGTG CAGTAGTCAA CAAGGTCTTG 2776 .......... .......... .......... .......... .......... .......... 300 AGTTTCTGAA AGCTTTCCTC ACATTCGTCC GACCATACAA ATGGAACATT CTGTTTAGTC 2716 .......... .......... .......... .......... .......... .......... 300 AAGTTCGTCA ATTGGGAAGC AATGGAAGAG AATCCCTTGA CAAATCGACG GTAATAGCTA 2656 .......... .......... .......... .......... .......... .......... 300 GCTAAACCAA CAAAGCTCCT TATTTCTGAC ACATTAGTAG GTCTTACCCA ATTCTTTACT 2596 .......... .......... .......... .......... .......... .......... 300 GTCTCAATCT TAGAAGGATA GACCATCACC TCATCCTTAG AAACCACATT CCCCAAGAAG 2536 .......... .......... .......... .......... .......... .......... 300 GACACTGCAT CTAGCCAAAA CTCACACTTG GAGAATTTGG CATAAAGCTT TTTCTCCCTC 2476 .......... .......... .......... .......... .......... .......... 300 AACATTTCCA ATACAATTCT CAAGTGCTTC TCGTGTTCCT TCTTGCTCTT TGAGTATACC 2416 .......... .......... .......... .......... .......... .......... 300 AATATATCAT CAATAAATAC GATCACAAAG AGATCCAGAT ATGGCTTAAA AATCCCGTTC 2356 .......... .......... .......... .......... .......... .......... 300 ATCAAGCTCA TGAAAGCAGC AGGGGCATTC GTAAGACCAA AAGACATCAC TACAAATTCG 2296 .......... .......... .......... .......... .......... .......... 300 TAATGCCCAT ACCTGGTCCG AAAAGCAGTT TTTGGCACAT CCATTGCCAG TATCTTCAAT 2236 .......... .......... .......... .......... .......... .......... 300 TGATGATAAC CGAACCTCAA GTCAATCTTA GAGAAGACAC AAGCACCTTG TAACTGATCG 2176 .......... .......... .......... .......... .......... .......... 300 AACAAGTCAT CAATGCGAGG AATGGGATAC TTGTTCTTAA TAGTTACCTT GTTCAACTGC 2116 .......... .......... .......... .......... .......... .......... 300 CGGTAGTTTA TGCACATCCG AAAACTCCCA TCCTTCTTCT TCACAAATAA CACTGGAGCT 2056 .......... .......... .......... .......... .......... .......... 300 TCCCAAGGGG ATGCACTTGG TCTAATGAAG CCTTTGCTTA ACAACTCTTG AAGTTAAGCT 1996 .......... .......... .......... .......... .......... .......... 300 TTTAACTCTC TTAACTCCGC GGGAGCCATT TTATAAGGGG GTATAGAAAT GGGGCGAGTA 1936 .......... .......... .......... .......... .......... .......... 300 CCCGGTTCAA GATCAATGCA GAAGTCAATA TCCCTATCTG GTGGCATACC AGGAAGATCT 1876 .......... .......... .......... .......... .......... .......... 300 GCAGGGAACA CATCCAGAAA CTCACGGACT ACCGAAACCG ACTCAATTGG AGGTACTTGG 1816 .......... .......... .......... .......... .......... .......... 300 GTAGTATCAT CTCGGAGGTG TGCCAAGAAC GCTAAACAAC CCTTACTAAC CATTTTCTTA 1756 .......... .......... .......... .......... .......... .......... 300 GCACGAAGAA AGGAGATAAT ACGAACCGGA TTGGAAGTGT AGTCACCCTC CCACACTAAT 1696 .......... .......... .......... .......... .......... .......... 300 GGATCTGTAC CAGGCTTGGC TAACGTCACG GTTTTAGCAT TGCAATCCAA GATCGCAAAA 1636 .......... .......... .......... .......... .......... .......... 300 TTCGGAGAAA GCCAAGTCAT ACCCAGAATT ACATCAAAAT CCACCATTTC TAAGATAACC 1576 .......... .......... .......... .......... .......... .......... 300 AAGTCTACAT AAGTATTGCT CCCCACAAAA GTCACCAGAC CAGACCTATA TACTTTTTCA 1516 .......... .......... .......... .......... .......... .......... 300 ACTATCACAG ACTCACCCAC CGGAGTAGAA ACACGAAT 1478 ||||| | | ||| .......... .......... .....TAGAA ATGCTAAT 313 hqPGS_C04HBa0119A16.1-_SGN-E578131+ (3915 3616) ******************************************************************************** EST sequence 23 -strand 763 n (File: SGN-E354383-) 1 AGAGAGTCGA TTTTCATATC CAAATTCAGA AATTCTAAGT ATGCTGAAAC GATGCACCTT 61 CGACGGGCCG TCGTGCCTGT GACGGTCCGT CGCAGTGCCC GTGGTCTTGG CCAGTTTTTC 121 CAGAATTAAA ATCTGCTGCT CAAAACGACT AAACAGGTCG TTACAATAGA TACCAATTTA 181 CCCATCGTTC GTCCCCGAAC GATCAAATGA AGAAAAACAA TGGCGAAAAG GAGTACCTGA 241 ATCTGTAAAC AGATGTGGGT ATTTTTCTTG CATATCTGCC TCCTTCTCCC AAGTAGCTTC 301 TTCAACCGGT CGATTCTTCC ATTGAACTTT GATGGATGCA ATTTCTCTCG ACCTCAACTT 361 GCGAACCTCT CTATCTAAAA TAGCAACTGG TTCCTCCTCA TAAGTCCAAT TCTCACCAAG 421 CGAAACTGAA TCCCAACGGA TGATGTAGTT TCCATCTCCA TGGTATCTTT TCAACATGGA 481 TACATGAAAT ACCGGATGTA CTCCGGACAG CCCTGGAGGT AAGGCTAATT CATAAGCCAC 541 CTCCCCTACT CGCTTTAGTA CCTCAAATGG TCCAATATAC CTTGGACTTA ACTTACCTCT 601 TTTACGAAAC CGCATCACCC CTTTCATTGG CGAGACTTTC AACAAGACTT GTTCGCCCTC 661 CATGAACTCT AAGTCTCTAA CCTTTCGATC TGCATATTCT TTTTGTCTAC TTTGCGCCGC 721 TAGAAGCTTT TCTTGAATAG ACTTCACTTT CTCCATCGAA TCT Predicted gene structure (within gDNA segment 6823 to 2953): Exon 1 4989 4229 ( 761 n); cDNA 1 762 ( 762 n); score: 0.850 MATCH C04HBa0119A16.1- SGN-E354383- 0.850 761 0.997 C PGS_C04HBa0119A16.1-_SGN-E354383- (4989 4229) Alignment (genomic DNA sequence = upper lines): AGAGAGTTGA TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA CGAGACCCCC 4930 ||||||| || ||| || | |||| ||||| || ||||||| | | ||||| ||| | || AGAGAGTCGA TTTTCATATC CAAA-TTCAG AAATTCTAAG TATGCTGAAA CGATGCACCT 59 TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA GCCAG-TTTT 4871 | ||||| || || ||||| |||||||||| ||| | | ||| |||| ||||| |||| TCGACGGGCC GTCGTGCCTG TGACGGTCCG TCGCAGTGCC CGTGGTCTTG GCCAGTTTTT 119 CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACAATAG ATACCAATTT 4811 |||||| ||| ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGAATTAA AATCTGCTGC TCAAAACGAC TAAACAGGTC GTTACAATAG ATACCAATTT 179 ACCCATTGTT CGTCCTCGAA CGATCATAAG AAG-AAAACA AGGGCGAAAA GAAGTACCTG 4752 |||||| ||| ||||| |||| |||||| | | ||| |||||| | |||||||| | |||||||| ACCCATCGTT CGTCCCCGAA CGATCAAATG AAGAAAAACA ATGGCGAAAA GGAGTACCTG 239 AATCTGTAAA CAGGTGGGGG TATCTTTCTT GCATATCAAC CTCTTTCTCC CAAGTGGCTT 4692 |||||||||| ||| || ||| ||| |||||| ||||||| | ||| |||||| ||||| |||| AATCTGTAAA CAGATGTGGG TATTTTTCTT GCATATCTGC CTCCTTCTCC CAAGTAGCTT 299 CTTCAACGGG TCGATTCTTC CATTGAACTT TGATGGATGC AATCTCCCTT GACCTCAGCT 4632 ||||||| || |||||||||| |||||||||| |||||||||| ||| || || ||||||| || CTTCAACCGG TCGATTCTTC CATTGAACTT TGATGGATGC AATTTCTCTC GACCTCAACT 359 TGCGAACTTC TCTATCTAAA ATAGCAACAG ACTCCTCCTC ATAAGACAAA TTTTCATCAA 4572 ||||||| || |||||||||| |||||||| | |||||||| ||||| | || || ||| ||| TGCGAACCTC TCTATCTAAA ATAGCAACTG GTTCCTCCTC ATAAGTCCAA TTCTCACCAA 419 GCAGCACTAA ATCCCAACGA ATGATGTAGT TTCCATCCCC ATGGTATCTT TTTCACATAG 4512 || ||| | ||||||||| |||||||||| ||||||| || |||||||||| || |||| | GCGAAACTGA ATCCCAACGG ATGATGTAGT TTCCATCTCC ATGGTATCTT TTCAACATGG 479 ACACATGAAA TACCGGATGC ACTCCGTACA GTCCCGGAGG CAAGGCTAAC TCATAAGCCA 4452 | |||||||| ||||||||| |||||| ||| | || ||||| |||||||| |||||||||| ATACATGAAA TACCGGATGT ACTCCGGACA GCCCTGGAGG TAAGGCTAAT TCATAAGCCA 539 CCTCTCCTAT GCGCTTCAAA ACTTCAAATG GACCAATATA CCTCGGACTA AGTTTACCTG 4392 |||| |||| ||||| | || ||||||| | |||||||| ||| ||||| | |||||| CCTCCCCTAC TCGCTTTAGT ACCTCAAATG GTCCAATATA CCTTGGACTT AACTTACCTC 599 GCTTACCAAA CAACATCACC CCTTTCATGG GCGAAACCTT CAACAAGACT TGTTCACACT 4332 |||| ||| | ||||||| |||||||| | |||| || || |||||||||| ||||| | || TTTTACGAAA CCGCATCACC CCTTTCATTG GCGAGACTTT CAACAAGACT TGTTCGCCCT 659 CCATAAACTC CAAGTCTCTA ACCTTTCGAA CGACATATTC CTTTTGCCTA CTTTGCGCCG 4272 |||| ||||| ||||||||| ||||||||| | ||||||| ||||| ||| |||||||||| CCATGAACTC TAAGTCTCTA ACCTTTCGAT CTGCATATTC TTTTTGTCTA CTTTGCGCCG 719 CCAAAAGCTT TTCTTGAATA CATTTCACCT TCTCCAATGA ATC 4229 | | |||||| |||||||||| | ||||| | |||||| || ||| CTAGAAGCTT TTCTTGAATA GACTTCACTT TCTCCATCGA ATC 762 hqPGS_C04HBa0119A16.1-_SGN-E354383- (4989 4229) ******************************************************************************** EST sequence 1 -strand 605 n (File: SGN-E347579-) 1 ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC 61 GTGACACCTG ATCCCCTAAT CTACGTGCCG GTTCGTGACA CCCGATCCCC TAATTCTACG 121 TGCCAGTTCG TGACACCCGA TCCCCTAATT CTACGTGTCG GTTCGTGACA CCCGATCCCC 181 TGCATGTGTC GGTACGTGAC ACTCCGATCC ACTAATATCA TTCTGTAAAT CATCAGGCCT 241 TCTCTATACC AAGGCATCAT CAATCCCATT ACTTTTATTC ATCAAGCCTT CTTCTATACC 301 AAGGCATCAT CATTAATAAG AGATTAGATT TTTATCAAGA TTTGGGATTC AATAACTTCA 361 TCATGCTTAA TATAATCACA ATTATATAAT CACGTTCATG CATGCATACA ATTAAGCATA 421 TAGCAGGGTT TACAATACTA CCAATACATA TCATTCTCTA TTAAGAGTTT ACTATGAAAG 481 CATGAAAACC ATAACCTACC TCCACCGAAG ATTAGTGATC AAGCAAGCAA ATTTTTCTCC 541 AAGCTTTGTT TCTCCCTTCT CGTTCGATTC TTCCTCTCTC TCTTGTTCTT TCTATTTTCT 601 TTATT Predicted gene structure (within gDNA segment 9048 to 3900): Exon 1 5990 5888 ( 103 n); cDNA 84 178 ( 95 n); score: 0.718 Intron 1 5887 5845 ( 43 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.74) Exon 2 5844 5761 ( 84 n); cDNA 179 261 ( 83 n); score: 0.589 Intron 2 5760 5694 ( 67 n); Pd: 0.000 (s: 0.46), Pa: 0.000 (s: 0.92) Exon 3 5693 5431 ( 263 n); cDNA 262 520 ( 259 n); score: 0.846 MATCH C04HBa0119A16.1- SGN-E347579- 0.769 450 0.744 C PGS_C04HBa0119A16.1-_SGN-E347579- (5990 5888,5844 5761,5693 5431) Alignment (genomic DNA sequence = upper lines): CGTGTCGGTA CGTGACACTC CGCTCCTCAT GTACTATCCT AGTGTCAGAA CGTGACACTC 5931 |||| |||| |||||||| | || ||| | | | | || ||| ||| |||||||| | CGTGCCGGTT CGTGACAC-C CGATCC-CCT -AA-T-TCTA CGTGCCAGTT CGTGACAC-C 137 CGATCCTCAT TCTATCCTGG TGTCAAAACG TGACACCCGA TCCATATTCT ATCCTGGTAC 5871 |||||| | | | || | |||| || |||||||||| ||| CGATCC-CCT AAT-TCTACG TGTCGGTTCG TGACACCCGA TCC....... .......... 178 CGGAACGTGG CACCCGATCC ATATACTATC CTGGTGTCGG AACGTGACAC TCCGATCCTC 5811 | | ||||||| ||||||||| |||||||| | .......... .......... ......CCTG CATGTGTCGG TACGTGACAC TCCGATCCAC 212 ATATACTATC CTGGTACCGG AACGTGGC-A CCCGATCCAT ATACTATCCT GGTGTCGGAA 5752 ||| || || ||| | | | | | | || | | | ||| | TAATATCATT CT-GTAAATC ATCAGGCCTT CTCTATACCA AGGC-ATCAT C......... 261 TGTGACACTC CGATCCTCAT ATACTATCCT GGTACCGGAA CGTGGCACCC GATCCCCTAA 5692 || .......... .......... .......... .......... .......... ........AA 263 TCTCACTACT TTAATTCATC AAGCCTTCTT TTATACCAAG GCATCATCAT TAACAAAGTA 5632 || || |||| || ||||||| |||||||||| ||||||||| |||||||||| ||| ||| | TCCCATTACT TTTATTCATC AAGCCTTCTT CTATACCAAG GCATCATCAT TAA-TAAG-A 321 GATTAGGATT TCTTTTTCAA GATTTAGGAT TC-ATAGCTT CATCATGCTT -ATTTTATCT 5574 ||||| || | | ||| |||| ||||| |||| || ||| ||| |||||||||| || | ||| GATTA-GA-T T-TTTATCAA GATTTGGGAT TCAATAACTT CATCATGCTT AATATAATCA 378 CAATCATATA ATCAC-AACA TGCAAACACA TAATTAAGCA TATAGAAGGG TTTACAACAC 5515 |||| ||||| ||||| || |||| || | ||||||||| ||||| |||| ||||||| || CAATTATATA ATCACGTTCA TGCATGCATA CAATTAAGCA TATAGCAGGG TTTACAATAC 438 TACCCAATAC ATATCATTCT CTATTAAGAG TTTACTACGA ATAGTATAAA AACCATAACC 5455 || ||||||| |||||||||| |||||||||| ||||||| || | || || || |||||||||| TA-CCAATAC ATATCATTCT CTATTAAGAG TTTACTATGA A-AGCATGAA AACCATAACC 496 TACCTCCACC GAAGAATTTT GATC 5431 |||||||||| ||||| | | |||| TACCTCCACC GAAGATTAGT GATC 520 hqPGS_C04HBa0119A16.1-_SGN-E347579- (5990 5888,5844 5761,5693 5431) ******************************************************************************** EST sequence 11 -strand 542 n (File: SGN-E252199-) 1 CGACCCAGCC TGGGATTACG CAGTCTGTGA CGGTCCGTCC TGCACGTCCG TCACAGAGTT 61 CAGAGACTAG ATTTTTACCA AGGGTCTGTG ACGGCCCATC ACGCCTGTGA CGGTCCGTCC 121 TGCCATTCCG TCACGAAGTT CAGAGAGTCG ATTTCAGTAC CCAAATTTCA GAATTCTAAG 181 TGTTTTGGAA CGAGACCCCC TCGACGGTCC GTCGTGGGAT CCGTCGTCTC AGTCAGTTTT 241 TCCAGAAATA AAATCTGTTA CTCAAAACGA CTAAACAGGT CGTTACAATA GATACCAATT 301 TACCCATCGT TCGTCCCCGA ACGATCACAA GAAGAAAAAC AAGGGCGAAA AGGAGTACCT 361 GAATCTGTAA ACAGGTATGG GTATCTTTCT CGCATATCAA CTTCCTTCTC CCAAGTGGAT 421 TCTTCAACTG GTCGATTCTT CCATTGAACT TTGATAGATG CAATCTCCCT TGACCTCAAT 481 TTGCGGACTT CTCTATCTAA AATGGCAACA GGCTCCTCCT CATAAGACAA ATTCTCATCA 541 AG Predicted gene structure (within gDNA segment 6901 to 3890): Exon 1 5133 4571 ( 563 n); cDNA 3 542 ( 540 n); score: 0.858 MATCH C04HBa0119A16.1- SGN-E252199- 0.858 563 1.039 C PGS_C04HBa0119A16.1-_SGN-E252199- (5133 4571) Alignment (genomic DNA sequence = upper lines): ACGCAGCCTG TGACGGGCCG TCGTGCCTGC GACGGTCTGT CCTGCTGCTC CGTCACAGAG 5074 || ||||||| || || | | ||| ||||||| || ||||| || |||||||||| ACCCAGCCTG GGA--TTACG -C-AGTCTGT GACGGTCCGT CCTGCACGTC CGTCACAGAG 58 TTCAGAGACT CACTTTTTAT TTAAGACCCT GTGACGGCCC GTCATGCCTG TGACGGTCCA 5014 |||||||||| |||||| ||| || |||||||||| ||| ||||| ||||||||| TTCAGAGACT AGATTTTTA- CCAAGGGTCT GTGACGGCCC ATCACGCCTG TGACGGTCCG 117 TCCTGCACTT TTGTCACGAA GTTCAGAGAG TTGATTTCAG TACCCAAATT TCAGAATTTC 4954 |||||| || |||||||| |||||||||| | |||||||| |||||||||| |||||| ||| TCCTGCCATT CCGTCACGAA GTTCAGAGAG TCGATTTCAG TACCCAAATT TCAGAA-TTC 176 TAAGTGTTTT GAAACGAGAC CCCCTTGACG GTCCGTTGTG CCCATGACGG TCCGTCGTGG 4894 |||||||||| | ||||||| |||| | | | | |||| |||||||||| TAAGTGTTTT GGAACGAGA- CCCC----C- -T-C---G-- ------ACGG TCCGTCGTGG 217 GATCCGTCGT CTCAGCCAG- TTTTCCAGAA ATAACATCTG TTGCTCAAAA CGACTAAACA 4835 |||||||||| ||||| ||| |||||||||| |||| ||||| || ||||||| |||||||||| GATCCGTCGT CTCAGTCAGT TTTTCCAGAA ATAAAATCTG TTACTCAAAA CGACTAAACA 277 GGTCGTTACA ATAGATACCA ATTTACCCAT TGTTCGTCCT CGAACGATCA TAAGAAG-AA 4776 |||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||| || GGTCGTTACA ATAGATACCA ATTTACCCAT CGTTCGTCCC CGAACGATCA CAAGAAGAAA 337 AACAAGGGCG AAAAGAAGTA CCTGAATCTG TAAACAGGTG GGGGTATCTT TCTTGCATAT 4716 |||||||||| ||||| |||| |||||||||| ||||||||| ||||||||| ||| |||||| AACAAGGGCG AAAAGGAGTA CCTGAATCTG TAAACAGGTA TGGGTATCTT TCTCGCATAT 397 CAACCTCTTT CTCCCAAGTG GCTTCTTCAA CGGGTCGATT CTTCCATTGA ACTTTGATGG 4656 |||| || || |||||||||| | |||||||| | |||||||| |||||||||| |||||||| | CAACTTCCTT CTCCCAAGTG GATTCTTCAA CTGGTCGATT CTTCCATTGA ACTTTGATAG 457 ATGCAATCTC CCTTGACCTC AGCTTGCGAA CTTCTCTATC TAAAATAGCA ACAGACTCCT 4596 |||||||||| |||||||||| | ||||| | |||||||||| |||||| ||| |||| ||||| ATGCAATCTC CCTTGACCTC AATTTGCGGA CTTCTCTATC TAAAATGGCA ACAGGCTCCT 517 CCTCATAAGA CAAATTTTCA TCAAG 4571 |||||||||| |||||| ||| ||||| CCTCATAAGA CAAATTCTCA TCAAG 542 hqPGS_C04HBa0119A16.1-_SGN-E252199- (5133 4571) ******************************************************************************** EST sequence 16 -strand 515 n (File: SGN-E242359-) 1 AGTATGTATT AAGCAATATC ATAAAATTAA CTAATATCCT TAGCATGCAG CATTTGCAAT 61 TACCATAACC CTTGGTTGCA TCACCAAGCA CATCAATGAG GACTCACACC TCCTCATCAT 121 ACTTATTTGG GAATTTAGTT CATTGGATTG CATATATTAA CATATTTCAA GATTCATCAT 181 ATTTATTCCC CTCGTGTCCT TACGTGACAC TCCACTCCTC AATATACTAT CCTGGCACCG 241 GAACGTGGCA CCCGATCCAT ATTCTATCCT GGTGTCAGAA CGTGACACCC GATCCATATT 301 CTATCCTGGT GTCGGAACGT GACACCCGAT CCATATTCTA TCCTGGTACC GGAACGTGGC 361 ACCCGATCCA TATTCTATCC TGGTGTCGGA ACGTGACACC CGATCCATAT TCTATCCTGG 421 TACCGGAACG TGGCACCCGA TCCCCTAATC TCACCACTTT CGTTCATCAA GCCTTCTTTT 481 ATACCAAGGC ATCATTATTA ACAAAGTAGA TTAGG Predicted gene structure (within gDNA segment 9142 to 5025): Exon 1 6182 5838 ( 345 n); cDNA 1 345 ( 345 n); score: 0.871 Intron 1 5837 5798 ( 40 n); Pd: 0.000 (s: 0.92), Pa: 0.000 (s: 0.96) Exon 2 5797 5625 ( 173 n); cDNA 346 515 ( 170 n); score: 0.942 MATCH C04HBa0119A16.1- SGN-E242359- 0.895 518 1.006 C PGS_C04HBa0119A16.1-_SGN-E242359- (6182 5838,5797 5625) Alignment (genomic DNA sequence = upper lines): AGTATATATT AGATAACATC ATAAAATCAA CTATAATACT CAACATGCAG CATTTACAAT 6123 ||||| |||| | || ||| ||||||| || ||| || || | ||||||| ||||| |||| AGTATGTATT AAGCAATATC ATAAAATTAA CTAATATCCT TAGCATGCAG CATTTGCAAT 60 TACCATAACC CTTGGTTACA ACACCAAGCA CATCAATGAG GACTCACGCC TCCTCATCAT 6063 |||||||||| ||||||| || ||||||||| |||||||||| ||||||| || |||||||||| TACCATAACC CTTGGTTGCA TCACCAAGCA CATCAATGAG GACTCACACC TCCTCATCAT 120 ACTCATTTGG GAATTAGGTT CATTAGATTG AATATATTAA CATCTTTCAA GATTCATTAT 6003 ||| |||||| ||||| ||| |||| ||||| ||||||||| ||| |||||| ||||||| || ACTTATTTGG GAATTTAGTT CATTGGATTG CATATATTAA CATATTTCAA GATTCATCAT 180 CTTTATTCCT CTCGTGTCGG TACGTGACAC TCCGCTCCTC -ATGTACTAT CCTAGTGTCA 5944 |||||||| |||||||| |||||||||| ||| |||||| || |||||| ||| | | ATTTATTCCC CTCGTGTCCT TACGTGACAC TCCACTCCTC AATATACTAT CCTGGCACCG 240 GAACGTGACA CTCCGATCCT CATTCTATCC TGGTGTCAAA ACGTGACACC CGATCCATAT 5884 ||||||| || | ||||||| ||||||||| |||||||| | |||||||||| |||||||||| GAACGTGGCA C-CCGATCCA TATTCTATCC TGGTGTCAGA ACGTGACACC CGATCCATAT 299 TCTATCCTGG TACCGGAACG TGGCACCCGA TCCATATACT ATCCTGGTGT CGGAACGTGA 5824 |||||||||| | ||||||| || ||||||| ||||||| || |||||| TCTATCCTGG TGTCGGAACG TGACACCCGA TCCATATTCT ATCCTG.... .......... 345 CACTCCGATC CTCATATACT ATCCTGGTAC CGGAACGTGG CACCCGATCC ATATACTATC 5764 |||| |||||||||| |||||||||| |||| ||||| .......... .......... ......GTAC CGGAACGTGG CACCCGATCC ATATTCTATC 379 CTGGTGTCGG AATGTGACAC TCCGATCCTC ATATACTATC CTGGTACCGG AACGTGGCAC 5704 |||||||||| || ||||||| ||||| | | |||| ||||| |||||||||| |||||||||| CTGGTGTCGG AACGTGACAC -CCGAT-C-C ATATTCTATC CTGGTACCGG AACGTGGCAC 436 CCGATCCCCT AATCTCACTA CTTTAATTCA TCAAGCCTTC TTTTATACCA AGGCATCATC 5644 |||||||||| |||||||| | |||| |||| |||||||||| |||||||||| ||||||||| CCGATCCCCT AATCTCACCA CTTTCGTTCA TCAAGCCTTC TTTTATACCA AGGCATCATT 496 ATTAACAAAG TAGATTAGG 5625 |||||||||| ||||||||| ATTAACAAAG TAGATTAGG 515 hqPGS_C04HBa0119A16.1-_SGN-E242359- (6182 5838,5797 5625) ******************************************************************************** EST sequence 66 +strand 686 n (File: SGN-E241789+) 1 ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 61 CAATAGCTCA CCCTGAAATC TGACGTGATG AAGACTGGTT AGAGTTGCGG TTGAGTTGAA 121 GACGACGGTA CGTTTGCTGC ACTCCACAAT TAACAAAAAG AAAACATAAA AGTAGGGGTC 181 AGTACAAACA CGAGTACTGA GTAGATATCA TCGGCCAACT CAGAATAGAG AACAATATAT 241 ATCAAATAAT AAAATAAAAT CAACCATAAC ACTTAACAGG TGACAACAAC AAGTACCATA 301 ACCATTGGGC ACAACCCAAG AACATCTATG AGGACTCAAG CCTCCACACC ATACTCATTT 361 GGGAAACAGG TTCATTAAAT TGAGTACATT AACATAATTC AAGATTCATT CTTTTTACTA 421 TCGTGGTGTC GGAACGTGAT ACTCCGATCC CCTAATGCTA CGTGTCGGTT CGTGACACCC 481 GATCCCCTAA TACTACGTGT CGGTTCGTTA CACCCGATCT CCTAATACTA CGTGCCGATT 541 CGTGACACCC GATCCATTAA TACTATGTGT CGGTTCGTGA CACCCGATCC ATTAATACTA 601 CGTGTCGGTT CGTGACACCC GATCCCCTAA CCTCATTCTT TTAGTTCATC AAGCCTTCTT 661 TTATACCAAG ACATCATCAT TAACAA Predicted gene structure (within gDNA segment 7907 to 459): Exon 1 6413 5948 ( 466 n); cDNA 1 465 ( 465 n); score: 0.821 Intron 1 5947 5871 ( 77 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.72) Exon 2 5870 5636 ( 235 n); cDNA 466 686 ( 221 n); score: 0.762 MATCH C04HBa0119A16.1- SGN-E241789+ 0.801 701 1.022 C PGS_C04HBa0119A16.1-_SGN-E241789+ (6413 5948,5870 5636) Alignment (genomic DNA sequence = upper lines): ATGCCGGAAC TTCAAGG-CA TCAAGACATG AA-GAG-GAA GATCCAGTCC AAGCTAGAAG 6357 ||| | || | ||||||| || |||||||||| || ||| || ||||||||| |||||| | ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 60 CATTAGCTCA CCCTGAAATC CGGAGTAATG AAGACTGGCT AGAGTTGCGG TTGAGTTGAA 6297 || ||||||| |||||||||| | || ||| |||||||| | |||||||||| |||||||||| CAATAGCTCA CCCTGAAATC TGACGTGATG AAGACTGGTT AGAGTTGCGG TTGAGTTGAA 120 GACGACGGCA CGTTTGCTGC ACTCCACAAT GAACAAAAAG AAAACATACA AGTAGGGGTC 6237 |||||||| | |||||||||| |||||||||| ||||||||| |||||||| | |||||||||| GACGACGGTA CGTTTGCTGC ACTCCACAAT TAACAAAAAG AAAACATAAA AGTAGGGGTC 180 ACTACAAAAC ACAGGTACTG AGTAGGTATC ATCGGCCAAC TCAAAATAGA AAACAGTATA 6177 | ||| |||| || |||||| ||||| |||| |||||||||| ||| |||||| |||| |||| AGTAC-AAAC ACGAGTACTG AGTAGATATC ATCGGCCAAC TCAGAATAGA GAACAATATA 239 TATTAGATAA CATCATAAAA TCAACTATAA TACTCAACAT GCAGCATTTA CAATTACCAT 6117 ||| | |||| | |||||| ||||| |||| ||| |||| | || | ||| |||||| TATCAAATAA TAAAATAAAA TCAACCATAA CACTTAACAG GTGACAACAA CAAGTACCAT 299 AACCCTTGGT TACAACACCA AGCACATCAA TGAGGACTCA CGCCTCCTCA TCATACTCAT 6057 |||| |||| ||||| ||| || ||||| | |||||||||| |||||| || ||||||||| AACCATTGGG CACAAC-CCA AGAACATCTA TGAGGACTCA AGCCTCCACA CCATACTCAT 358 TTGGGAATTA GGTTCATTAG ATTGAATATA TTAACATCTT TCAAGATTCA TTATCTTTAT 5997 ||||||| | ||||||||| ||||| || | ||||||| | |||||||||| || | |||| TTGGGAAACA GGTTCATTAA ATTGAGTACA TTAACATAAT TCAAGATTCA TTCTTTTTAC 418 TCCTCTCGTG TCGGTACGTG ACACTCCGCT CCTCATGTAC TATCCTAGTG TCAGAACGTG 5937 | | ||| |||| ||||| | |||||| | || | | | || | | || TATCGTGGTG TCGGAACGTG ATACTCCGAT CCCCTAATGC TA-CGT-GT. .......... 465 ACACTCCGAT CCTCATTCTA TCCTGGTGTC AAAACGTGAC ACCCGATCCA TATTCTATCC 5877 .......... .......... .......... .......... .......... .......... 465 TGGTACCGGA ACGTGGCACC CGATCCATAT ACTATCCTGG TGTCGGAACG TGACACTCCG 5817 ||| |||| |||| |||||| | | || | | |||||| || | |||| ||| ......CGGT TCGTGACACC CGATCC-CCT AATA-CTACG TGTCGGTTCG TTACAC-CCG 516 ATCCTCATAT ACTATCCTGG TACCGGAACG TGGCACCCGA TCCATATACT ATCCTGGTGT 5757 || ||| || | || | | | ||| || || ||||||| ||||| || | | | |||| AT-CTCCTA- A-TA-CTACG TGCCGATTCG TGACACCCGA TCCAT-TAAT A-CTATGTGT 570 CGGAATGTGA CACTCCGATC CTCATATACT ATCCTGGTAC CGGAACGTGG CACCCGATCC 5697 ||| |||| ||| |||||| | ||||| | | | || ||| |||| |||||||||| CGGTTCGTGA CAC-CCGATC CATTAATACT A-CGT-GT-- CGGTTCGTGA CACCCGATCC 625 CCTAATCTCA CTACTTTAAT TCATCAAGCC TTCTTTTATA CCAAGGCATC ATCATTAACA 5637 ||||| |||| | |||| | |||||||||| |||||||||| ||||| |||| |||||||||| CCTAACCTCA TTCTTTTAGT TCATCAAGCC TTCTTTTATA CCAAGACATC ATCATTAACA 685 A 5636 | A 686 hqPGS_C04HBa0119A16.1-_SGN-E241789+ (6413 5948,5870 5636) ******************************************************************************** EST sequence 8 -strand 681 n (File: SGN-E389553-) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCGTTCC TACTTAAATA TTATTATTAT TTTACGATTT 601 ATAACACTAT TAGAAACAAA GATTTTCTCA ACCATGAATT AATGAAAAAA TTATGGAATA 661 AAATATAAAA AATTACTCAT T Predicted gene structure (within gDNA segment 6485 to 1994): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 MATCH C04HBa0119A16.1- SGN-E389553- 0.855 533 0.783 C PGS_C04HBa0119A16.1-_SGN-E389553- (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E389553- (5357 4825) ******************************************************************************** EST sequence 53 +strand 720 n (File: SGN-E389834+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTA CGTCGACTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAGAACGAC 541 TAAACAGGAC GTTACATTTA TGATCGTCCT ACTTAAATAT CATTATTATT TTACGATTTA 601 TAACACTATT AGAAACGAAG ATTTTCTCGA CCATGAATTA ATGAAAAAAT ATGCCATGAA 661 ATATAAAAAT TTACTCGTTC TTCATTGAGC TATTCGTGAA AAAAAAAAAA AAATCGAGGG Predicted gene structure (within gDNA segment 6475 to 1594): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.847 Intron 1 4824 3044 (1781 n); Pd: 0.000 (s: 0.88), Pa: 0.669 (s: 0) Exon 2 3043 3031 ( 13 n); cDNA 557 569 ( 13 n); score: 0.615 PPA cDNA 699 714 MATCH C04HBa0119A16.1- SGN-E389834+ 0.847 546 0.758 C PGS_C04HBa0119A16.1-_SGN-E389834+ (5357 4825,3043 3031) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| | ||||| |||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTA CGTCGACTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACAATAG 4821 || | |||| ||| |||||| ||||| | | ||| |||||| |||||||| | |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAGAACGAC TAAACAGGAC GTTACA.... 556 ATACCAATTT ACCCATTGTT CGTCCTCGAA CGATCATAAG AAGAAAACAA GGGCGAAAAG 4761 .......... .......... .......... .......... .......... .......... 556 AAGTACCTGA ATCTGTAAAC AGGTGGGGGT ATCTTTCTTG CATATCAACC TCTTTCTCCC 4701 .......... .......... .......... .......... .......... .......... 556 AAGTGGCTTC TTCAACGGGT CGATTCTTCC ATTGAACTTT GATGGATGCA ATCTCCCTTG 4641 .......... .......... .......... .......... .......... .......... 556 ACCTCAGCTT GCGAACTTCT CTATCTAAAA TAGCAACAGA CTCCTCCTCA TAAGACAAAT 4581 .......... .......... .......... .......... .......... .......... 556 TTTCATCAAG CAGCACTAAA TCCCAACGAA TGATGTAGTT TCCATCCCCA TGGTATCTTT 4521 .......... .......... .......... .......... .......... .......... 556 TTCACATAGA CACATGAAAT ACCGGATGCA CTCCGTACAG TCCCGGAGGC AAGGCTAACT 4461 .......... .......... .......... .......... .......... .......... 556 CATAAGCCAC CTCTCCTATG CGCTTCAAAA CTTCAAATGG ACCAATATAC CTCGGACTAA 4401 .......... .......... .......... .......... .......... .......... 556 GTTTACCTGG CTTACCAAAC AACATCACCC CTTTCATGGG CGAAACCTTC AACAAGACTT 4341 .......... .......... .......... .......... .......... .......... 556 GTTCACACTC CATAAACTCC AAGTCTCTAA CCTTTCGAAC GACATATTCC TTTTGCCTAC 4281 .......... .......... .......... .......... .......... .......... 556 TTTGCGCCGC CAAAAGCTTT TCTTGAATAC ATTTCACCTT CTCCAATGAA TCCCTCAAAA 4221 .......... .......... .......... .......... .......... .......... 556 GGTCAATACC CCAAGGTCTA ACCTCAAATA CATCAAACCA ACCGATGGGA GACCTACATC 4161 .......... .......... .......... .......... .......... .......... 556 TCCTTCCATA CAGTGCTTCA AATGGGGCCA TATCAATACT TGAGTGATAG ATATTGTTGT 4101 .......... .......... .......... .......... .......... .......... 556 AGGAGAACTC CGCTAAGGGT AAGAAGTTAT CCCAATGAAC TCCAAATTCT ATCACACATG 4041 .......... .......... .......... .......... .......... .......... 556 CACGAAGCAT ATCCTCCAAC ACTTGAATCG TTCGCTCAGA CTAACCATCG GTCTGAGGAT 3981 .......... .......... .......... .......... .......... .......... 556 GGAATGCAGT ACTAAGGTCC AACCTAGTAT CTAATTCAGC ATGCAATGTT CTCCAAAACT 3921 .......... .......... .......... .......... .......... .......... 556 TAGAAGTAAA CTGCGTACCT CTATCTGATA TGATGGAGAG TGGAACTCCA TGCAATCGAA 3861 .......... .......... .......... .......... .......... .......... 556 CAATTTCTGA GATGTAAATT TTGGCTAACT TCTCTGCATT ATAAGTCACC TTGACCGGAA 3801 .......... .......... .......... .......... .......... .......... 556 TGAAGTGAGC AGACTTCGTT AACCTATCGA CAATCACCCA AATGGAGTCA TACTTACTCA 3741 .......... .......... .......... .......... .......... .......... 556 TTGTCTTTTG AAGACCAACC ACGAAGTCCA TTGCAATTCT CTCCCACATC CATTTAGGAA 3681 .......... .......... .......... .......... .......... .......... 556 TGGGCATTCT CTGAAGTGTT CCTCTAGGCC TCTGGTGTTC ATACTTTACT TGCTTACAAT 3621 .......... .......... .......... .......... .......... .......... 556 TTGGACATTT GGCAACAAAA TCAACAATGT CGCGCTTCAT TCTACTCCAC CAAAAGTGTT 3561 .......... .......... .......... .......... .......... .......... 556 GCTTTAGGTC ACGGTACATC TTGGTTGCAC CAGGATGTAT AGAGTACCTT GAACTATGAG 3501 .......... .......... .......... .......... .......... .......... 556 CTTCTGCCAG AATAGTGTTT ATCAAATCAT CAACGCGGGG TACACATACC CTTCCCTTGA 3441 .......... .......... .......... .......... .......... .......... 556 TTCTCAAAAC ACCTTCCTCA TCGATTTGCG CTTCCTTAGC CTCTCCTCGC AATACTTTAT 3381 .......... .......... .......... .......... .......... .......... 556 CTTGGATTCT GCTTAGTTTC TCATCATCAA ACTATTTTCC CTTAATCTTG TCAAGAAAAG 3321 .......... .......... .......... .......... .......... .......... 556 AAGATCTTGC CTCCACACAA GCCAACAATC CTCCCTTCTC ATTTACTTCT AACCTCATCA 3261 .......... .......... .......... .......... .......... .......... 556 AGTCGTTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGACG TCTAGAAACT TGCAAGTGAG 3201 .......... .......... .......... .......... .......... .......... 556 CCAGGCTTCC CATGCTTCTT GCCTTTCTAC TTAAGGTGTC TGCCACAACA TTAGCCTTTC 3141 .......... .......... .......... .......... .......... .......... 556 CCGGATGATA CAAGATAGTG ATATCGTAGT CCTTCAGTAG TTCCATCCAT CTCCTCTGTC 3081 .......... .......... .......... .......... .......... .......... 556 TCAAATTCAA ATCTTTTTGA GTAAACACAT ACTGTAGGCT ACGATGATCC 3031 | | ||| ||| .......... .......... .......... .......TTT ATGATCGTCC 569 hqPGS_C04HBa0119A16.1-_SGN-E389834+ (5357 4825) ******************************************************************************** EST sequence 42 +strand 710 n (File: SGN-E550065+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATGA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTGATTCAT AAGAAAAAAA Predicted gene structure (within gDNA segment 6475 to 1694): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 MATCH C04HBa0119A16.1- SGN-E550065+ 0.855 533 0.751 C PGS_C04HBa0119A16.1-_SGN-E550065+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550065+ (5357 4825) ******************************************************************************** EST sequence 43 +strand 726 n (File: SGN-E550322+) 1 TCGCACCAGA TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC 61 CTCCTTCTTT TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT 121 AATTTACTCA AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA 181 CTAACTTTAT AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC 241 CGACCCAGAC TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT 301 GCAGGTCGTC GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA 361 CGCCCGTGAC GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC 421 CCAATTTCAG AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT 481 GACGGTCCGT CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT 541 CAAAACGACT AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT 601 TACGATTTAT AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT 661 ATGCCATAAA ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA 721 AAAAAC Predicted gene structure (within gDNA segment 6565 to 1624): Exon 1 5357 4825 ( 533 n); cDNA 34 565 ( 532 n); score: 0.855 PPA cDNA 708 725 MATCH C04HBa0119A16.1- SGN-E550322+ 0.855 533 0.734 C PGS_C04HBa0119A16.1-_SGN-E550322+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 92 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 152 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 212 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 272 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 331 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 391 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 450 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 509 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 565 hqPGS_C04HBa0119A16.1-_SGN-E550322+ (5357 4825) ******************************************************************************** EST sequence 44 +strand 732 n (File: SGN-E550201+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCNA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAAAAAACT 721 CGAGGGGGGG CC Predicted gene structure (within gDNA segment 6475 to 1474): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 699 718 MATCH C04HBa0119A16.1- SGN-E550201+ 0.855 533 0.728 C PGS_C04HBa0119A16.1-_SGN-E550201+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550201+ (5357 4825) ******************************************************************************** EST sequence 45 +strand 709 n (File: SGN-E550207+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTNCA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAA Predicted gene structure (within gDNA segment 6475 to 1704): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 699 709 MATCH C04HBa0119A16.1- SGN-E550207+ 0.855 533 0.752 C PGS_C04HBa0119A16.1-_SGN-E550207+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550207+ (5357 4825) ******************************************************************************** EST sequence 46 +strand 715 n (File: SGN-E550335+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAATCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTCNAC CATGAATTAA TGAAAAAATT ATGCCATAAA 661 ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 6465 to 1634): Exon 1 5357 4825 ( 533 n); cDNA 25 555 ( 531 n); score: 0.853 PPA cDNA 698 715 MATCH C04HBa0119A16.1- SGN-E550335+ 0.853 533 0.745 C PGS_C04HBa0119A16.1-_SGN-E550335+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| ||||| || | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAACCC-T CCTTCTTTTA CCCTAATTAG CATATAATTA 82 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 142 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 202 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 262 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 321 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AATCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 381 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 440 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 499 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 555 hqPGS_C04HBa0119A16.1-_SGN-E550335+ (5357 4825) ******************************************************************************** EST sequence 52 +strand 714 n (File: SGN-E390013+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACNAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 6475 to 1654): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 699 714 MATCH C04HBa0119A16.1- SGN-E390013+ 0.855 533 0.746 C PGS_C04HBa0119A16.1-_SGN-E390013+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E390013+ (5357 4825) ******************************************************************************** EST sequence 55 +strand 717 n (File: SGN-E550484+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 6475 to 1624): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 699 717 MATCH C04HBa0119A16.1- SGN-E550484+ 0.855 533 0.743 C PGS_C04HBa0119A16.1-_SGN-E550484+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550484+ (5357 4825) ******************************************************************************** EST sequence 56 +strand 713 n (File: SGN-E550211+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT ATGCCATAAA 661 ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 6465 to 1654): Exon 1 5357 4825 ( 533 n); cDNA 25 555 ( 531 n); score: 0.853 PPA cDNA 698 713 MATCH C04HBa0119A16.1- SGN-E550211+ 0.853 533 0.748 C PGS_C04HBa0119A16.1-_SGN-E550211+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| ||||| || | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAACCC-T CCTTCTTTTA CCCTAATTAG CATATAATTA 82 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 142 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 202 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 262 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 321 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 381 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 440 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 499 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 555 hqPGS_C04HBa0119A16.1-_SGN-E550211+ (5357 4825) ******************************************************************************** EST sequence 57 +strand 713 n (File: SGN-E550464+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GNTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCTA CCATGAATTA ATGAAAAATT ATGCCATAAG 661 ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 6475 to 1664): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.853 PPA cDNA 698 713 MATCH C04HBa0119A16.1- SGN-E550464+ 0.853 533 0.748 C PGS_C04HBa0119A16.1-_SGN-E550464+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| | |||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GNTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550464+ (5357 4825) ******************************************************************************** EST sequence 58 +strand 713 n (File: SGN-E549941+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA TATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCGA CCNATGATTA ATGAAAAATT ATGCCATCAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 6475 to 1664): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 699 713 MATCH C04HBa0119A16.1- SGN-E549941+ 0.855 533 0.748 C PGS_C04HBa0119A16.1-_SGN-E549941+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA TATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E549941+ (5357 4825) ******************************************************************************** EST sequence 59 +strand 714 n (File: SGN-E550025+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 6475 to 1654): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 699 714 MATCH C04HBa0119A16.1- SGN-E550025+ 0.855 533 0.746 C PGS_C04HBa0119A16.1-_SGN-E550025+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550025+ (5357 4825) ******************************************************************************** EST sequence 60 +strand 558 n (File: SGN-E231589+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA TAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTT Predicted gene structure (within gDNA segment 6465 to 3204): Exon 1 5357 4825 ( 533 n); cDNA 24 555 ( 532 n); score: 0.853 MATCH C04HBa0119A16.1- SGN-E231589+ 0.853 533 0.955 C PGS_C04HBa0119A16.1-_SGN-E231589+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 82 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 142 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 202 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 262 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || ||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAT AGACTCAATT 321 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 381 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 440 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 499 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 555 hqPGS_C04HBa0119A16.1-_SGN-E231589+ (5357 4825) ******************************************************************************** EST sequence 72 +strand 649 n (File: SGN-E374999+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CCAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTTCAC CCTGAATTAA TGAAAAAAT Predicted gene structure (within gDNA segment 6465 to 2294): Exon 1 5357 4825 ( 533 n); cDNA 24 555 ( 532 n); score: 0.853 MATCH C04HBa0119A16.1- SGN-E374999+ 0.853 533 0.821 C PGS_C04HBa0119A16.1-_SGN-E374999+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 82 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 142 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 202 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 262 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 321 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 381 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 440 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 499 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | || ||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCCAAACGAC TAAACAGGTC GTTACA 555 hqPGS_C04HBa0119A16.1-_SGN-E374999+ (5357 4825) ******************************************************************************** EST sequence 76 +strand 711 n (File: SGN-E396039+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AAAAACAAAG ATTTTCTCCA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AAATAAAAAA AATTTACTCA TTTTTTCTTG GAGCTAATTC AAAAAAAAAA A Predicted gene structure (within gDNA segment 6475 to 1684): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 661 672 MATCH C04HBa0119A16.1- SGN-E396039+ 0.855 533 0.750 C PGS_C04HBa0119A16.1-_SGN-E396039+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E396039+ (5357 4825) ******************************************************************************** EST sequence 77 +strand 618 n (File: SGN-E396054+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAA Predicted gene structure (within gDNA segment 6475 to 2614): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 MATCH C04HBa0119A16.1- SGN-E396054+ 0.855 533 0.862 C PGS_C04HBa0119A16.1-_SGN-E396054+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E396054+ (5357 4825) ******************************************************************************** EST sequence 78 +strand 711 n (File: SGN-E396056+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAA ATTTTCTCAC CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATAATAAAA ATTTACTCAT TTTTTCTTTG AGCTAATTCA TAAAAAAAAA A Predicted gene structure (within gDNA segment 6475 to 1684): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 PPA cDNA 700 711 MATCH C04HBa0119A16.1- SGN-E396056+ 0.855 533 0.750 C PGS_C04HBa0119A16.1-_SGN-E396056+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E396056+ (5357 4825) ******************************************************************************** EST sequence 79 +strand 610 n (File: SGN-E396058+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTGTTT CCAAAAATAA AATCTGCTAC TCACAACGAC 541 TAAACAGGTC GTTACATTTA GGTTCTTCAT AGTTAACTAT TATTATTATT TTACGATTTA 601 TAACACTATT Predicted gene structure (within gDNA segment 6475 to 2694): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.853 MATCH C04HBa0119A16.1- SGN-E396058+ 0.853 533 0.874 C PGS_C04HBa0119A16.1-_SGN-E396058+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAGT-TTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || || ||| ||| |||||| ||||| | | ||| |||||| |||||||||| |||||| ACCTGTGTTT CCAAAAATAA AATCTGCTAC TCACAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E396058+ (5357 4825) ******************************************************************************** EST sequence 84 +strand 690 n (File: SGN-E377133+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT ATGCCATAAA 661 ATATAAAAAA TTTACTCATT TTTCATTGAG Predicted gene structure (within gDNA segment 6465 to 1884): Exon 1 5357 4825 ( 533 n); cDNA 24 555 ( 532 n); score: 0.855 MATCH C04HBa0119A16.1- SGN-E377133+ 0.855 533 0.772 C PGS_C04HBa0119A16.1-_SGN-E377133+ (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 82 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 142 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 202 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 262 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 321 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 381 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 440 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 499 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 555 hqPGS_C04HBa0119A16.1-_SGN-E377133+ (5357 4825) ******************************************************************************** EST sequence 6 -strand 673 n (File: SGN-E550140-) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTACTCN 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATGTTATCAA CCATGAATTA ACAAAAAATT AGACCAAAAA 661 TATAAAAAAT TAC Predicted gene structure (within gDNA segment 6485 to 2074): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.849 MATCH C04HBa0119A16.1- SGN-E550140- 0.849 533 0.792 C PGS_C04HBa0119A16.1-_SGN-E550140- (5357 4825) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| ||| ||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTACTCNAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACA 4825 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550140- (5357 4825) ******************************************************************************** EST sequence 41 +strand 729 n (File: SGN-E550212+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAAAACTCG 721 GGGGGGGGC Predicted gene structure (within gDNA segment 6475 to 1504): Exon 1 5357 4825 ( 533 n); cDNA 25 556 ( 532 n); score: 0.855 Intron 1 4824 3044 (1781 n); Pd: 0.000 (s: 0.92), Pa: 0.669 (s: 0) Exon 2 3043 3031 ( 13 n); cDNA 557 569 ( 13 n); score: 0.538 PPA cDNA 699 716 MATCH C04HBa0119A16.1- SGN-E550212+ 0.855 546 0.749 C PGS_C04HBa0119A16.1-_SGN-E550212+ (5357 4825,3043 3031) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 83 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 143 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 203 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 263 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 322 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 382 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 441 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 500 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACAGGTC GTTACAATAG 4821 || | |||| ||| |||||| ||||| | | |||||||||| |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA.... 556 ATACCAATTT ACCCATTGTT CGTCCTCGAA CGATCATAAG AAGAAAACAA GGGCGAAAAG 4761 .......... .......... .......... .......... .......... .......... 556 AAGTACCTGA ATCTGTAAAC AGGTGGGGGT ATCTTTCTTG CATATCAACC TCTTTCTCCC 4701 .......... .......... .......... .......... .......... .......... 556 AAGTGGCTTC TTCAACGGGT CGATTCTTCC ATTGAACTTT GATGGATGCA ATCTCCCTTG 4641 .......... .......... .......... .......... .......... .......... 556 ACCTCAGCTT GCGAACTTCT CTATCTAAAA TAGCAACAGA CTCCTCCTCA TAAGACAAAT 4581 .......... .......... .......... .......... .......... .......... 556 TTTCATCAAG CAGCACTAAA TCCCAACGAA TGATGTAGTT TCCATCCCCA TGGTATCTTT 4521 .......... .......... .......... .......... .......... .......... 556 TTCACATAGA CACATGAAAT ACCGGATGCA CTCCGTACAG TCCCGGAGGC AAGGCTAACT 4461 .......... .......... .......... .......... .......... .......... 556 CATAAGCCAC CTCTCCTATG CGCTTCAAAA CTTCAAATGG ACCAATATAC CTCGGACTAA 4401 .......... .......... .......... .......... .......... .......... 556 GTTTACCTGG CTTACCAAAC AACATCACCC CTTTCATGGG CGAAACCTTC AACAAGACTT 4341 .......... .......... .......... .......... .......... .......... 556 GTTCACACTC CATAAACTCC AAGTCTCTAA CCTTTCGAAC GACATATTCC TTTTGCCTAC 4281 .......... .......... .......... .......... .......... .......... 556 TTTGCGCCGC CAAAAGCTTT TCTTGAATAC ATTTCACCTT CTCCAATGAA TCCCTCAAAA 4221 .......... .......... .......... .......... .......... .......... 556 GGTCAATACC CCAAGGTCTA ACCTCAAATA CATCAAACCA ACCGATGGGA GACCTACATC 4161 .......... .......... .......... .......... .......... .......... 556 TCCTTCCATA CAGTGCTTCA AATGGGGCCA TATCAATACT TGAGTGATAG ATATTGTTGT 4101 .......... .......... .......... .......... .......... .......... 556 AGGAGAACTC CGCTAAGGGT AAGAAGTTAT CCCAATGAAC TCCAAATTCT ATCACACATG 4041 .......... .......... .......... .......... .......... .......... 556 CACGAAGCAT ATCCTCCAAC ACTTGAATCG TTCGCTCAGA CTAACCATCG GTCTGAGGAT 3981 .......... .......... .......... .......... .......... .......... 556 GGAATGCAGT ACTAAGGTCC AACCTAGTAT CTAATTCAGC ATGCAATGTT CTCCAAAACT 3921 .......... .......... .......... .......... .......... .......... 556 TAGAAGTAAA CTGCGTACCT CTATCTGATA TGATGGAGAG TGGAACTCCA TGCAATCGAA 3861 .......... .......... .......... .......... .......... .......... 556 CAATTTCTGA GATGTAAATT TTGGCTAACT TCTCTGCATT ATAAGTCACC TTGACCGGAA 3801 .......... .......... .......... .......... .......... .......... 556 TGAAGTGAGC AGACTTCGTT AACCTATCGA CAATCACCCA AATGGAGTCA TACTTACTCA 3741 .......... .......... .......... .......... .......... .......... 556 TTGTCTTTTG AAGACCAACC ACGAAGTCCA TTGCAATTCT CTCCCACATC CATTTAGGAA 3681 .......... .......... .......... .......... .......... .......... 556 TGGGCATTCT CTGAAGTGTT CCTCTAGGCC TCTGGTGTTC ATACTTTACT TGCTTACAAT 3621 .......... .......... .......... .......... .......... .......... 556 TTGGACATTT GGCAACAAAA TCAACAATGT CGCGCTTCAT TCTACTCCAC CAAAAGTGTT 3561 .......... .......... .......... .......... .......... .......... 556 GCTTTAGGTC ACGGTACATC TTGGTTGCAC CAGGATGTAT AGAGTACCTT GAACTATGAG 3501 .......... .......... .......... .......... .......... .......... 556 CTTCTGCCAG AATAGTGTTT ATCAAATCAT CAACGCGGGG TACACATACC CTTCCCTTGA 3441 .......... .......... .......... .......... .......... .......... 556 TTCTCAAAAC ACCTTCCTCA TCGATTTGCG CTTCCTTAGC CTCTCCTCGC AATACTTTAT 3381 .......... .......... .......... .......... .......... .......... 556 CTTGGATTCT GCTTAGTTTC TCATCATCAA ACTATTTTCC CTTAATCTTG TCAAGAAAAG 3321 .......... .......... .......... .......... .......... .......... 556 AAGATCTTGC CTCCACACAA GCCAACAATC CTCCCTTCTC ATTTACTTCT AACCTCATCA 3261 .......... .......... .......... .......... .......... .......... 556 AGTCGTTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGACG TCTAGAAACT TGCAAGTGAG 3201 .......... .......... .......... .......... .......... .......... 556 CCAGGCTTCC CATGCTTCTT GCCTTTCTAC TTAAGGTGTC TGCCACAACA TTAGCCTTTC 3141 .......... .......... .......... .......... .......... .......... 556 CCGGATGATA CAAGATAGTG ATATCGTAGT CCTTCAGTAG TTCCATCCAT CTCCTCTGTC 3081 .......... .......... .......... .......... .......... .......... 556 TCAAATTCAA ATCTTTTTGA GTAAACACAT ACTGTAGGCT ACGATGATCC 3031 | | | | ||| .......... .......... .......... .......TTT ATGTTCTTCC 569 hqPGS_C04HBa0119A16.1-_SGN-E550212+ (5357 4825) ******************************************************************************** EST sequence 5 -strand 679 n (File: SGN-E550127-) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTCCT TTTCTTTTTC TTATCAAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTGCACAA CCATGAATTA ATGAAAAAAT TATGACATAA 661 AATATAAAAA ATTACTCAT Predicted gene structure (within gDNA segment 6485 to 2014): Exon 1 5346 4825 ( 522 n); cDNA 35 556 ( 522 n); score: 0.852 MATCH C04HBa0119A16.1- SGN-E550127- 0.852 522 0.769 C PGS_C04HBa0119A16.1-_SGN-E550127- (5346 4825) Alignment (genomic DNA sequence = upper lines): TTTTTCTTAT TCAAACCATC TTTCTTTTAC CCTAATTAGC ATATAATTAA GTATAAAAGA 5287 |||||||||| ||||| || ||||||||| |||||||||| |||||||||| | |||||||| TTTTTCTTAT CAAAACCCTC CTTCTTTTAC CCTAATTAGC ATATAATTAA GAATAAAAGA 94 TGAGGACTTA ACCCACTAAT TAACTCAAGG TTACCTCTTT TAACCCCCAA GTAATT-GAG 5228 || || |||||||||| | |||||||| |||||||||| ||||||||| |||||| || TGGAATAATA ACCCACTAAT TTACTCAAGG TTACCTCTTT TAACCCCCAG GTAATTAGAC 154 TTATTAATAT TAAACCACTA ACTTTATAAT TATAGCAGGA ATAGTCCAAA ACGTCCCTTA 5168 ||||||| || || |||||| |||||||||| || || |||| |||||||||| |||||||||| TTATTAACAT AAACCCACTA ACTTTATAAT TAAAGTAGGA ATAGTCCAAA ACGTCCCTTA 214 AAATATTTAA AGAAATCCGA CCTCGCTTGG GATTACGCAG CCTGTGACGG GCCGTCGTGC 5108 ||| | ||| |||||||||| || | ||| ||||||||| ||||||| || ||||||||| AAACGTGTAA AGAAATCCGA CCCAGACTGG GATTACGCAA CCTGTGATGG CCCGTCGTGC 274 CTGCGACGGT CTGTCCTGCT GCTCCGTCAC AGAGTTCAGA GACTCACTTT TTATTTAAGA 5048 |||||||||| | ||||||| | | |||| | | ||||||| |||||| ||| | |||| CTGCGACGGT CCGTCCTGCA GGT-CGTCGC AAGGTTCAGA GACTCAATTT CCACCAAAGA 333 CCCTGTGACG GCCCGTCATG CCTGTGACGG TCCATCCTGC ACTTTTGTCA CGAAGTTCAG 4988 |||||||| | |||||| | || ||||||| ||| || ||| || || | |||||||||| GTCTGTGACG GTCCGTCACG CCCGTGACGG TCCGTCGTGC CATTCCGTTA CGAAGTTCAG 393 AGAGTTGA-T TTCAGTACCC AAATTTCAGA ATTTCTAAGT GTTTTGAAAC GAGACCCCCT 4929 ||||| || | || ||||||| ||||||||| |||||||||| |||||||||| |||| | ||| AGAGTCGATT TTTAGTACCC -AATTTCAGA ATTTCTAAGT GTTTTGAAAC GAGA-CTCCT 451 TGACGGTCCG TTGTGCCCAT GACGGTCCGT CGTGGGATCC GTCGTCTCAG CCAG-TTTTC 4870 |||||||| | |||| ||| |||||||||| |||||| ||| ||||||||| || | ||||| CGACGGTCCA TCGTGCTCAT GACGGTCCGT CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC 511 CAGAAATAAC ATCTGTTGCT CAAAACGACT AAACAGGTCG TTACA 4825 || |||||| ||||| | || |||||||||| |||||||||| ||||| CAAAAATAAA ATCTGCTACT CAAAACGACT AAACAGGTCG TTACA 556 hqPGS_C04HBa0119A16.1-_SGN-E550127- (5346 4825) ******************************************************************************** EST sequence 25 -strand 658 n (File: SGN-E377132-) 1 TTCCTTCTTT TACCCTAATT AGCATATATT TAAGAATAAA AGATGGAATA ATAACCCACT 61 AATTTACTCA AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA 121 CTAACTTTAT AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC 181 CGACCCAGAC TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT 241 GCAGGTCGTC GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA 301 CGCCCGTGAC GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC 361 CCAATTTCAG AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT 421 GACGGTCCGT CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT 481 CAAAACGACT AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT 541 TACGATTTAT AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT 601 ATGCCATAAA ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAA Predicted gene structure (within gDNA segment 8918 to 1714): Exon 1 5328 4825 ( 504 n); cDNA 2 505 ( 504 n); score: 0.850 PPA cDNA 648 658 MATCH C04HBa0119A16.1- SGN-E377132- 0.850 504 0.766 C PGS_C04HBa0119A16.1-_SGN-E377132- (5328 4825) Alignment (genomic DNA sequence = upper lines): TCTTTCTTTT ACCCTAATTA GCATATAATT AAGTATAAAA GATGAGGACT TAACCCACTA 5269 || ||||||| |||||||||| ||||||| || ||| |||||| |||| |||||||||| TCCTTCTTTT ACCCTAATTA GCATATATTT AAGAATAAAA GATGGAATAA TAACCCACTA 61 ATTAACTCAA GGTTACCTCT TTTAACCCCC AAGTAATT-G AGTTATTAAT ATTAAACCAC 5210 ||| |||||| |||||||||| |||||||||| | |||||| | | ||||||| || || |||| ATTTACTCAA GGTTACCTCT TTTAACCCCC AGGTAATTAG ACTTATTAAC ATAAACCCAC 121 TAACTTTATA ATTATAGCAG GAATAGTCCA AAACGTCCCT TAAAATATTT AAAGAAATCC 5150 |||||||||| |||| || || |||||||||| |||||||||| ||||| | | |||||||||| TAACTTTATA ATTAAAGTAG GAATAGTCCA AAACGTCCCT TAAAACGTGT AAAGAAATCC 181 GACCTCGCTT GGGATTACGC AGCCTGTGAC GGGCCGTCGT GCCTGCGACG GTCTGTCCTG 5090 |||| | | |||||||||| | ||||||| || ||||||| |||||||||| ||| |||||| GACCCAGACT GGGATTACGC AACCTGTGAT GGCCCGTCGT GCCTGCGACG GTCCGTCCTG 241 CTGCTCCGTC ACAGAGTTCA GAGACTCACT TTTTATTTAA GACCCTGTGA CGGCCCGTCA 5030 | | | |||| || ||||| |||||||| | || | || || |||||| ||| |||||| CAGGT-CGTC GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA 300 TGCCTGTGAC GGTCCATCCT GCACTTTTGT CACGAAGTTC AGAGAGTTGA -TTTCAGTAC 4971 ||| ||||| ||||| || | || || || ||||||||| ||||||| || ||| ||||| CGCCCGTGAC GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC 360 CCAAATTTCA GAATTTCTAA GTGTTTTGAA ACGAGACCCC CTTGACGGTC CGTTGTGCCC 4911 || ||||||| |||||||||| |||||||||| |||||| | | || ||||||| | | |||| | CC-AATTTCA GAATTTCTAA GTGTTTTGAA ACGAGA-CTC CTCGACGGTC CATCGTGCTC 418 ATGACGGTCC GTCGTGGGAT CCGTCGTCTC AGCCAG-TTT TCCAGAAATA ACATCTGTTG 4852 |||||||||| |||||||| | |||||||||| | || | ||| |||| ||||| | ||||| | ATGACGGTCC GTCGTGGGTT CCGTCGTCTC AACCTGTTTT TCCAAAAATA AAATCTGCTA 478 CTCAAAACGA CTAAACAGGT CGTTACA 4825 |||||||||| |||||||||| ||||||| CTCAAAACGA CTAAACAGGT CGTTACA 505 hqPGS_C04HBa0119A16.1-_SGN-E377132- (5328 4825) ******************************************************************************** EST sequence 21 -strand 647 n (File: SGN-E396055-) 1 ATTAGCATAT AATTAAGAAT AAAAAGATGG AAATAATAAC CCACTAATTT ACTCAAGGGT 61 TCCTTTTTTT AACCCCCAGG GTAATTAGAC TTATTAACAT AAACCCCACT AACTTTATAA 121 TTAAAGTAGG AATAGTCCAA AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG 181 GGATTACGCA ACCTGTGATG GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGTCGTCGC 241 AAGGTTCAGA GACTCAATTT CCACCAAAGA GTCTGTGACG GTCCGTCACG CCCGTGACGG 301 TCCGTCGTGC CATTCCGTTA CGAAGTTCAG AGAGTCGATT TTTAGTACCC AATTTCAGAA 361 TTTCTAAGTG TTTTGAAACG AGACTCCTCG ACGGTCCATC GTGCTCATGA CGGTCCGTCG 421 TGGGTTCCGT CGTCTCAACC TGTTTTTCCA AAAATAAAAT CTGCTACTCA AAACGACTAA 481 ACAGGTCGTT ACATTTATGT TCTTCCTACT TAAATATTAT TATTATTTTA CGATTTATAA 541 CACTATTAGA AACAAAGATT TTCTCAACCA TGAATTAATG AAAAAATTAT GCCATAAAAT 601 ATAAAAAATT TACTCATTTT TCATTGAGCT AATTCATAAA AAAAAAA Predicted gene structure (within gDNA segment 8798 to 1704): Exon 1 5312 4825 ( 488 n); cDNA 1 493 ( 493 n); score: 0.820 PPA cDNA 636 647 MATCH C04HBa0119A16.1- SGN-E396055- 0.820 488 0.754 C PGS_C04HBa0119A16.1-_SGN-E396055- (5312 4825) Alignment (genomic DNA sequence = upper lines): ATTAGCATAT AATTAAGTAT -AAAAGAT-G AGGACTTAAC CCACTAATTA ACTCAAGG-T 5256 |||||||||| ||||||| || ||||||| | | |||| ||||||||| |||||||| | ATTAGCATAT AATTAAGAAT AAAAAGATGG AAATAATAAC CCACTAATTT ACTCAAGGGT 60 TACCTCTTTT AACCCCCA-A GTAATT-GAG TTATTAATAT TAA-ACCACT AACTTTATAA 5199 | | | |||| |||||||| |||||| || ||||||| || || ||||| |||||||||| TCCTTTTTTT AACCCCCAGG GTAATTAGAC TTATTAACAT AAACCCCACT AACTTTATAA 120 TTATAGCAGG AATAGTCCAA AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG 5139 ||| || ||| |||||||||| |||||||||| |||| | || |||||||||| ||| | || TTAAAGTAGG AATAGTCCAA AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG 180 GGATTACGCA GCCTGTGACG GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA 5079 |||||||||| ||||||| | | |||||||| |||||||||| || ||||||| | | |||| GGATTACGCA ACCTGTGATG GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG 239 CAGAGTTCAG AGACTCACTT TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG 5019 || |||||| ||||||| || | | ||| | ||||||| || |||||| ||| |||||| CAAGGTTCAG AGACTCAATT TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG 299 GTCCATCCTG CACTTTTGTC ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG 4960 |||| || || | || || |||||||||| |||||| || ||| |||||| | |||||||| GTCCGTCGTG CCATTCCGTT ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG 358 AATTTCTAAG TGTTTTGAAA CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG 4900 |||||||||| |||||||||| ||||| | || | |||||||| | |||| || |||||||||| AATTTCTAAG TGTTTTGAAA CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 417 TCGTGGGATC CGTCGTCTCA GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC 4841 ||||||| || |||||||||| || | |||| ||| |||||| ||||| | | |||||||||| TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 477 TAAACAGGTC GTTACA 4825 |||||||||| |||||| TAAACAGGTC GTTACA 493 hqPGS_C04HBa0119A16.1-_SGN-E396055- (5312 4825) ******************************************************************************** EST sequence 20 -strand 640 n (File: SGN-E398551-) 1 TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAA TAATTTACTC AAGGTTACCT 61 CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA TAATTAAAGT 121 AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA CTGGGATTAC 181 GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGCAAGGTTC 241 AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA CGGTCCGTCG 301 TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GAATTTCTAA 361 GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC 421 CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC 481 GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA TAACACTATT 541 AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA AATATAAAAA 601 ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA Predicted gene structure (within gDNA segment 8728 to 1704): Exon 1 5310 4825 ( 486 n); cDNA 1 486 ( 486 n); score: 0.847 PPA cDNA 629 640 MATCH C04HBa0119A16.1- SGN-E398551- 0.847 486 0.759 C PGS_C04HBa0119A16.1-_SGN-E398551- (5310 4825) Alignment (genomic DNA sequence = upper lines): TAGCATATAA TTAAGTATAA AAGATGAGGA CTTAACCCAC TAATTAACTC AAGGTTACCT 5251 |||||||||| ||||| |||| |||||| ||||||| ||||| |||| |||||||||| TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAA TAATTTACTC AAGGTTACCT 60 CTTTTAACCC CCAAGTAATT -GAGTTATTA ATATTAAACC ACTAACTTTA TAATTATAGC 5192 |||||||||| ||| |||||| || |||||| | || || || |||||||||| |||||| || CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA TAATTAAAGT 120 AGGAATAGTC CAAAACGTCC CTTAAAATAT TTAAAGAAAT CCGACCTCGC TTGGGATTAC 5132 |||||||||| |||||||||| ||||||| | ||||||||| |||||| | ||||||||| AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA CTGGGATTAC 180 GCAGCCTGTG ACGGGCCGTC GTGCCTGCGA CGGTCTGTCC TGCTGCTCCG TCACAGAGTT 5072 ||| |||||| | || ||||| |||||||||| ||||| |||| ||| | | || || || ||| GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGT-CG TCGCAAGGTT 239 CAGAGACTCA CTTTTTATTT AAGACCCTGT GACGGCCCGT CATGCCTGTG ACGGTCCATC 5012 |||||||||| ||| | |||| |||| ||||| |||| || ||| ||| ||||||| || CAGAGACTCA ATTTCCACCA AAGAGTCTGT GACGGTCCGT CACGCCCGTG ACGGTCCGTC 299 CTGCACTTTT GTCACGAAGT TCAGAGAGTT GA-TTTCAGT ACCCAAATTT CAGAATTTCT 4953 ||| || || ||||||| ||||||||| || ||| ||| |||| ||||| |||||||||| GTGCCATTCC GTTACGAAGT TCAGAGAGTC GATTTTTAGT ACCC-AATTT CAGAATTTCT 358 AAGTGTTTTG AAACGAGACC CCCTTGACGG TCCGTTGTGC CCATGACGGT CCGTCGTGGG 4893 |||||||||| |||||||| | ||| ||||| ||| | |||| ||||||||| |||||||||| AAGTGTTTTG AAACGAGA-C TCCTCGACGG TCCATCGTGC TCATGACGGT CCGTCGTGGG 417 ATCCGTCGTC TCAGCCAG-T TTTCCAGAAA TAACATCTGT TGCTCAAAAC GACTAAACAG 4834 ||||||||| ||| || | | |||||| ||| ||| ||||| | |||||||| |||||||||| TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC GACTAAACAG 477 GTCGTTACA 4825 ||||||||| GTCGTTACA 486 hqPGS_C04HBa0119A16.1-_SGN-E398551- (5310 4825) ******************************************************************************** EST sequence 19 -strand 630 n (File: SGN-E396038-) 1 TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC AAGGTTACCT CTTTTAACCC 61 CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA TAATTAAAGT AGGAATAGTC 121 CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA CTGGGATTAC GCAACCTGTG 181 ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGCAAGGTTC AGAGACTCAA 241 TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA CGGTCCGTCG TGCCATTCCG 301 TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GAATTTCTAA GTGTTTTGAA 361 ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 421 ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACATTTA 481 TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA TAACACTATT AGAAACAAAG 541 ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA AATATAAAAA ATTTACTCAT 601 TTTTCATAGA GTTAAATAAT AAAAAAAAAA Predicted gene structure (within gDNA segment 8628 to 1704): Exon 1 5300 4825 ( 476 n); cDNA 1 476 ( 476 n); score: 0.846 PPA cDNA 621 630 MATCH C04HBa0119A16.1- SGN-E396038- 0.846 476 0.756 C PGS_C04HBa0119A16.1-_SGN-E396038- (5300 4825) Alignment (genomic DNA sequence = upper lines): TTAAGTATAA AAGATGAGGA CTTAACCCAC TAATTAACTC AAGGTTACCT CTTTTAACCC 5241 ||||| |||| |||||| |||||||| ||||| |||| |||||||||| |||||||||| TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC AAGGTTACCT CTTTTAACCC 60 CCAAGTAATT -GAGTTATTA ATATTAAACC ACTAACTTTA TAATTATAGC AGGAATAGTC 5182 ||| |||||| || |||||| | || || || |||||||||| |||||| || |||||||||| CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA TAATTAAAGT AGGAATAGTC 120 CAAAACGTCC CTTAAAATAT TTAAAGAAAT CCGACCTCGC TTGGGATTAC GCAGCCTGTG 5122 |||||||||| ||||||| | ||||||||| |||||| | ||||||||| ||| |||||| CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA CTGGGATTAC GCAACCTGTG 180 ACGGGCCGTC GTGCCTGCGA CGGTCTGTCC TGCTGCTCCG TCACAGAGTT CAGAGACTCA 5062 | || ||||| |||||||||| ||||| |||| ||| | | || || || ||| |||||||||| ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGT-CG TCGCAAGGTT CAGAGACTCA 239 CTTTTTATTT AAGACCCTGT GACGGCCCGT CATGCCTGTG ACGGTCCATC CTGCACTTTT 5002 ||| | |||| |||| ||||| |||| || ||| ||| ||||||| || ||| || ATTTCCACCA AAGAGTCTGT GACGGTCCGT CACGCCCGTG ACGGTCCGTC GTGCCATTCC 299 GTCACGAAGT TCAGAGAGTT GA-TTTCAGT ACCCAAATTT CAGAATTTCT AAGTGTTTTG 4943 || ||||||| ||||||||| || ||| ||| |||| ||||| |||||||||| |||||||||| GTTACGAAGT TCAGAGAGTC GATTTTTAGT ACCC-AATTT CAGAATTTCT AAGTGTTTTG 358 AAACGAGACC CCCTTGACGG TCCGTTGTGC CCATGACGGT CCGTCGTGGG ATCCGTCGTC 4883 |||||||| | ||| ||||| ||| | |||| ||||||||| |||||||||| ||||||||| AAACGAGA-C TCCTCGACGG TCCATCGTGC TCATGACGGT CCGTCGTGGG TTCCGTCGTC 417 TCAGCCAG-T TTTCCAGAAA TAACATCTGT TGCTCAAAAC GACTAAACAG GTCGTTACA 4825 ||| || | | |||||| ||| ||| ||||| | |||||||| |||||||||| ||||||||| TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC GACTAAACAG GTCGTTACA 476 hqPGS_C04HBa0119A16.1-_SGN-E396038- (5300 4825) ******************************************************************************** EST sequence 22 -strand 525 n (File: SGN-E396069-) 1 AAAGTAGGAA TAGTCCAAAA CGTCCCTTAA AACGTGTAAA GAAATCCGAC CCCCACCGGG 61 ATTACGCAAC CTGTGATGGC CCGTCGTGCC TGCGACGGTC CGTCCTGCAG GTCGTCGCAA 121 GGTTCAGAGA CTCAATTTCC ACCAAAGAGT CTGTGACGGT CCGTCACGCC CGTGACGGTC 181 CGTCGTGCCA TTCCGTTACG AAGTTCAGAG AGTCGATTTT TAGTACCCAA TTTCAGAATT 241 TCTAAGTGTT TTGAAACGAG ACTCCTCGAC GGTCCATCGT GCTCATGACG GTCCGTCGTG 301 GGTTCCGTCG TCTCAACCTG TTTTTCCAAA AATAAAATCT GCTACTCAAA ACGACTAAAC 361 AGGTCGTTAC ATTTATGTTC TTCCTACTTA AATATTATTA TTATTTTACG ATTTATAACA 421 CTATTAGAAA CAAAGATTTT CTCAACCATG AATTAATGAA AAAATTATGC CATAAAATAT 481 AAAAAATTTA CTCATTTTTC ATTGAGCTAA TTCATAAAAA AAAAA Predicted gene structure (within gDNA segment 7578 to 1704): Exon 1 5194 4825 ( 370 n); cDNA 3 371 ( 369 n); score: 0.843 PPA cDNA 514 525 MATCH C04HBa0119A16.1- SGN-E396069- 0.843 370 0.705 C PGS_C04HBa0119A16.1-_SGN-E396069- (5194 4825) Alignment (genomic DNA sequence = upper lines): AGCAGGAATA GTCCAAAACG TCCCTTAAAA TATTTAAAGA AATCCGACCT CGCTTGGGAT 5135 || ||||||| |||||||||| |||||||||| | |||||| ||||||||| | ||||| AGTAGGAATA GTCCAAAACG TCCCTTAAAA CGTGTAAAGA AATCCGACCC CCACCGGGAT 62 TACGCAGCCT GTGACGGGCC GTCGTGCCTG CGACGGTCTG TCCTGCTGCT CCGTCACAGA 5075 |||||| ||| |||| || || |||||||||| |||||||| | |||||| | | |||| || TACGCAACCT GTGATGGCCC GTCGTGCCTG CGACGGTCCG TCCTGCAGGT -CGTCGCAAG 121 GTTCAGAGAC TCACTTTTTA TTTAAGACCC TGTGACGGCC CGTCATGCCT GTGACGGTCC 5015 |||||||||| ||| ||| | |||| | |||||||| | ||||| ||| |||||||||| GTTCAGAGAC TCAATTTCCA CCAAAGAGTC TGTGACGGTC CGTCACGCCC GTGACGGTCC 181 ATCCTGCACT TTTGTCACGA AGTTCAGAGA GTTGA-TTTC AGTACCCAAA TTTCAGAATT 4956 || ||| | | || |||| |||||||||| || || ||| ||||||| || |||||||||| GTCGTGCCAT TCCGTTACGA AGTTCAGAGA GTCGATTTTT AGTACCC-AA TTTCAGAATT 240 TCTAAGTGTT TTGAAACGAG ACCCCCTTGA CGGTCCGTTG TGCCCATGAC GGTCCGTCGT 4896 |||||||||| |||||||||| | | ||| || |||||| | | ||| |||||| |||||||||| TCTAAGTGTT TTGAAACGAG A-CTCCTCGA CGGTCCATCG TGCTCATGAC GGTCCGTCGT 299 GGGATCCGTC GTCTCAGCCA G-TTTTCCAG AAATAACATC TGTTGCTCAA AACGACTAAA 4837 ||| |||||| |||||| || | ||||||| |||||| ||| || | ||||| |||||||||| GGGTTCCGTC GTCTCAACCT GTTTTTCCAA AAATAAAATC TGCTACTCAA AACGACTAAA 359 CAGGTCGTTA CA 4825 |||||||||| || CAGGTCGTTA CA 371 hqPGS_C04HBa0119A16.1-_SGN-E396069- (5194 4825) ******************************************************************************** EST sequence 15 -strand 519 n (File: SGN-E374998-) 1 GGAATAGTAC ATAACGTCCC TTAAAACGTG TAAAAGAAAT CCGACCCAGA CTGGGATTAC 61 GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGCAAGGTTC 121 AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA CGGTCCGTCG 181 TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GAATTTCTAA 241 GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC 301 CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC 361 GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA TAACACTATT 421 AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA AATATAAAAA 481 ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAA Predicted gene structure (within gDNA segment 7528 to 1714): Exon 1 5190 4825 ( 366 n); cDNA 1 366 ( 366 n); score: 0.835 PPA cDNA 509 519 MATCH C04HBa0119A16.1- SGN-E374998- 0.835 366 0.705 C PGS_C04HBa0119A16.1-_SGN-E374998- (5190 4825) Alignment (genomic DNA sequence = upper lines): GGAATAGTCC AAAACGTCCC TTAAAATAT- TTAAAGAAAT CCGACCTCGC TTGGGATTAC 5132 |||||||| | | |||||||| |||||| | | |||||||| |||||| | ||||||||| GGAATAGTAC ATAACGTCCC TTAAAACGTG TAAAAGAAAT CCGACCCAGA CTGGGATTAC 60 GCAGCCTGTG ACGGGCCGTC GTGCCTGCGA CGGTCTGTCC TGCTGCTCCG TCACAGAGTT 5072 ||| |||||| | || ||||| |||||||||| ||||| |||| ||| | | || || || ||| GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGT-CG TCGCAAGGTT 119 CAGAGACTCA CTTTTTATTT AAGACCCTGT GACGGCCCGT CATGCCTGTG ACGGTCCATC 5012 |||||||||| ||| | |||| |||| ||||| |||| || ||| ||| ||||||| || CAGAGACTCA ATTTCCACCA AAGAGTCTGT GACGGTCCGT CACGCCCGTG ACGGTCCGTC 179 CTGCACTTTT GTCACGAAGT TCAGAGAGTT GA-TTTCAGT ACCCAAATTT CAGAATTTCT 4953 ||| || || ||||||| ||||||||| || ||| ||| |||| ||||| |||||||||| GTGCCATTCC GTTACGAAGT TCAGAGAGTC GATTTTTAGT ACCC-AATTT CAGAATTTCT 238 AAGTGTTTTG AAACGAGACC CCCTTGACGG TCCGTTGTGC CCATGACGGT CCGTCGTGGG 4893 |||||||||| |||||||| | ||| ||||| ||| | |||| ||||||||| |||||||||| AAGTGTTTTG AAACGAGA-C TCCTCGACGG TCCATCGTGC TCATGACGGT CCGTCGTGGG 297 ATCCGTCGTC TCAGCCAG-T TTTCCAGAAA TAACATCTGT TGCTCAAAAC GACTAAACAG 4834 ||||||||| ||| || | | |||||| ||| ||| ||||| | |||||||| |||||||||| TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC GACTAAACAG 357 GTCGTTACA 4825 ||||||||| GTCGTTACA 366 hqPGS_C04HBa0119A16.1-_SGN-E374998- (5190 4825) ******************************************************************************** EST sequence 98 +strand 545 n (File: SGN-E241959+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACA Predicted gene structure (within gDNA segment 6465 to 3334): Exon 1 5357 4835 ( 523 n); cDNA 24 545 ( 522 n); score: 0.852 MATCH C04HBa0119A16.1- SGN-E241959+ 0.852 523 0.960 C PGS_C04HBa0119A16.1-_SGN-E241959+ (5357 4835) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 82 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 142 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 202 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 262 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 321 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 381 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 440 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGACGGTCCG TCGTGGGATC CGTCGTCTCA 4880 ||||| | || | |||||||| | |||| || |||||||||| ||||||| || |||||||||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 499 GCCAG-TTTT CCAGAAATAA CATCTGTTGC TCAAAACGAC TAAACA 4835 || | |||| ||| |||||| ||||| | | |||||||||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACA 545 hqPGS_C04HBa0119A16.1-_SGN-E241959+ (5357 4835) ******************************************************************************** EST sequence 81 +strand 472 n (File: SGN-E236652+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GA Predicted gene structure (within gDNA segment 6465 to 4064): Exon 1 5357 4907 ( 451 n); cDNA 24 472 ( 449 n); score: 0.849 MATCH C04HBa0119A16.1- SGN-E236652+ 0.849 451 0.956 C PGS_C04HBa0119A16.1-_SGN-E236652+ (5357 4907) Alignment (genomic DNA sequence = upper lines): TGTTCTTTCT ATTTTTCTTA TTCAAACCAT CTTTCTTTTA CCCTAATTAG CATATAATTA 5298 |||||||| | ||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TGTTCTTT-T CTTTTTCTTA TTCAAACCCT CCTTCTTTTA CCCTAATTAG CATATAATTA 82 AGTATAAAAG ATGAGGACTT AACCCACTAA TTAACTCAAG GTTACCTCTT TTAACCCCCA 5238 || ||||||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| AGAATAAAAG ATGGAATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCCCA 142 AGTAATT-GA GTTATTAATA TTAAACCACT AACTTTATAA TTATAGCAGG AATAGTCCAA 5179 |||||| || ||||||| | | || ||||| |||||||||| ||| || ||| |||||||||| GGTAATTAGA CTTATTAACA TAAACCCACT AACTTTATAA TTAAAGTAGG AATAGTCCAA 202 AACGTCCCTT AAAATATTTA AAGAAATCCG ACCTCGCTTG GGATTACGCA GCCTGTGACG 5119 |||||||||| |||| | || |||||||||| ||| | || |||||||||| ||||||| | AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG GGATTACGCA ACCTGTGATG 262 GGCCGTCGTG CCTGCGACGG TCTGTCCTGC TGCTCCGTCA CAGAGTTCAG AGACTCACTT 5059 | |||||||| |||||||||| || ||||||| | | |||| || |||||| ||||||| || GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGT-CGTCG CAAGGTTCAG AGACTCAATT 321 TTTATTTAAG ACCCTGTGAC GGCCCGTCAT GCCTGTGACG GTCCATCCTG CACTTTTGTC 4999 | | ||| | ||||||| || |||||| ||| |||||| |||| || || | || || TCCACCAAAG AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT 381 ACGAAGTTCA GAGAGTTGA- TTTCAGTACC CAAATTTCAG AATTTCTAAG TGTTTTGAAA 4940 |||||||||| |||||| || ||| |||||| | |||||||| |||||||||| |||||||||| ACGAAGTTCA GAGAGTCGAT TTTTAGTACC C-AATTTCAG AATTTCTAAG TGTTTTGAAA 440 CGAGACCCCC TTGACGGTCC GTTGTGCCCA TGA 4907 ||||| | || | |||||||| | |||| || ||| CGAGA-CTCC TCGACGGTCC ATCGTGCTCA TGA 472 hqPGS_C04HBa0119A16.1-_SGN-E236652+ (5357 4907) ******************************************************************************** EST sequence 2 -strand 774 n (File: SGN-E349977-) 1 AGTAGATATC ATCGCTAACT CAAAATAGGG AACAATATAT ATCAATAATA ATGTAAATCA 61 ACTACAATAC TCATCATGTA GCAATAGCAA TTTCTTNATC ATTAACAATT ACCGTCAAGT 121 TCACACATGA GGACTCAAGC CTCAATACCA TACTCATTTG GGAATTAAGT TCATTAGATT 181 GAGTATATTC ATTATCTTTC AAGATTCATT ATCTTTCTTC CTCTTGTGTC GGTACGTGAC 241 ACTCCGCTCC TCTATTTCTA TCCTGGTGCC GGAACGTGGC ACTCCGATCC TCATATTCAT 301 TCTATCCTGG TACCGGAACG TGGCACCCGA TCCTCATATT CTATCCTGGT GTCGGAACGT 361 AACACTCCGA TCCTCATATT CATTCTATCC TGGTACCGGA ACGTGGCACC CGATCCTCAT 421 ATTCTATCCT GGTGTCGGAA CGTGACACTC CGATCCTCAT ATTCTATCCT GGTGTCGGAA 481 CGTGACACTC CGATCCTCAT ATTCATTCTA TCCTGGTACC GAAACGTGGC ACCCGATCCC 541 CTAATTCATC AAGCCTTCTT CTACACTAAG GCATCATCAT TCTCATTATA TAATTTATCA 601 AGCCTTCTCT CATACTAAGG CCTCATCAAT CTTATTATAT AATATATCAA GTGAATTAGG 661 GTTCTTTCAA GATTTGGGAT TCAATAGCTT CATCATGCTT TGTTAATTCA TAACAATTTC 721 ATAATCATAA TCATGCAAGC ATACCAATAA GCATATAGAC AGGTTTACAA CATC Predicted gene structure (within gDNA segment 10305 to 2460): Exon 1 6216 5918 ( 299 n); cDNA 1 297 ( 297 n); score: 0.786 Intron 1 5917 5887 ( 31 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.85) Exon 2 5886 5691 ( 196 n); cDNA 298 502 ( 205 n); score: 0.824 MATCH C04HBa0119A16.1- SGN-E349977- 0.801 495 0.640 C PGS_C04HBa0119A16.1-_SGN-E349977- (6216 5918,5886 5691) Alignment (genomic DNA sequence = upper lines): AGTAGGTATC ATCGGCCAAC TCAAAATAGA AAACAGTATA TATTAGATAA CATCATAAAA 6157 ||||| |||| ||| || ||| ||||||||| |||| |||| ||| | |||| | | ||| AGTAGATATC ATC-GCTAAC TCAAAATAGG GAACAATATA TATCA-ATAA TAATGT-AAA 57 TCAACTATAA TACTCAACAT GCAGCATTTA CAATTACCAT AACCCTTGGT TA-CAACACC 6098 ||||||| || |||||| ||| | |||| | ||||| | | | | || | | | | TCAACTACAA TACTCATCAT GTAGCAATAG CAATT-TCTT NATCATTAAC AATTACCGTC 116 AAGCACATCA ATGAGGACTC ACGCCTCCTC ATCATACTCA TTTGGGAATT AGGTTCATTA 6038 ||| || |||||||||| | ||||| | |||||||| |||||||||| | |||||||| AAGTTCACAC ATGAGGACTC AAGCCTCAAT ACCATACTCA TTTGGGAATT AAGTTCATTA 176 GATTGAATAT ATT-AACATC TTTCAAGATT CATTATCTTT ATTCCTCTCG TGTCGGTACG 5979 |||||| ||| ||| | ||| |||||||||| |||||||||| ||||||| | |||||||||| GATTGAGTAT ATTCATTATC TTTCAAGATT CATTATCTTT CTTCCTCTTG TGTCGGTACG 236 TGACACTCCG CTCCTCATGT ACTATCCTAG TGTCAGAACG TGACACTCCG ATCCTCATTC 5919 |||||||||| |||||| | ||||||| | || | ||||| || ||||||| |||||||| TGACACTCCG CTCCTCTATT TCTATCCTGG TGCCGGAACG TGGCACTCCG ATCCTCATAT 296 TATCCTGGTG TCAAAACGTG ACACCCGATC CATATTCTAT CCTGGTACCG GAACGTGGCA 5859 | ||||||| |||||||||| |||||||||| T......... .......... .......... ..CATTCTAT CCTGGTACCG GAACGTGGCA 325 CCCGAT-C-C ATATACTATC CTGGTGTCGG AACGTGACAC TCCGATCCTC ATA-T-A--C 5805 |||||| | | |||| ||||| |||||||||| ||||| |||| |||||||||| ||| | | | CCCGATCCTC ATATTCTATC CTGGTGTCGG AACGTAACAC TCCGATCCTC ATATTCATTC 385 TATCCTGGTA CCGGAACGTG GCACCCGAT- C-CATATACT ATCCTGGTGT CGGAATGTGA 5747 |||||||||| |||||||||| ||||||||| | ||||| || |||||||||| ||||| |||| TATCCTGGTA CCGGAACGTG GCACCCGATC CTCATATTCT ATCCTGGTGT CGGAACGTGA 445 CACTCCGATC CTCATATACT ATCCTGGTAC CGGAACGTGG CAC-CCGATC CCCTAAT 5691 |||||||||| ||||||| || |||||||| ||||||||| ||| |||||| | | || CACTCCGATC CTCATATTCT ATCCTGGTGT CGGAACGTGA CACTCCGATC CTCATAT 502 hqPGS_C04HBa0119A16.1-_SGN-E349977- (6216 5918,5886 5691) ******************************************************************************** EST sequence 96 +strand 730 n (File: SGN-E546506+) 1 TTTTTTTTTT TTTTTTTTAA TAAAAACAAT TCAATACTAT TATTATTATC CCCAAAATCT 61 GGAAGTCATC ATCACAAGAA CATCTATCTC AAATTACTTA ACTAGGAATG TCTAAGAACA 121 AAATAACTAA AAAGCTAGTC CATGCCGGAA ATTCAAGGCA TCAAGACTTG AAGAAGAAGA 181 CCCAGTCCAA GCTAGACGCA TTAGCTCACC CTGAATTTTC CGATGAAGTG AAGACTGGCT 241 AGATCTACTG TTGAGTTGAA GTTGACGGAA CGTTTGCTGC ATTACACAAA TAACAAAGAG 301 GAAAACATGA AAGTAGGGGT CAGTACAACC ACACGTACTG AGTAGATATC ATCGGCCAAC 361 TCAAAATAGG GAACAGTATA TATCAATAAT AATGTAAATC AACTACAATA CTCAACATGT 421 AGCAATAACA CCATGAATTC ATCAATAACT ACAACCGAGT TCACACATGA GGACTCAAGC 481 CTCAATACCA TACTCATTTG GGAATTAAGT TCATTAGATT GAGTATATTC ATTATCTTTC 541 AAGATTCATT ATCTTTCTTC CTCTTGTGTC GGTACGTGAC ACTCCGATCC TCTATTTCTA 601 TCCTGGTGCC GGAACGTGGC ACTCCGATCC TCATTCTATC CTGGTACCGG AACGTGGCAC 661 CCGATCCATT TTCTATCCTG GTGTCGGAAC GTGACACTCC GATCCTCATA TTCTATCCTG 721 GTACCGGAAC Predicted gene structure (within gDNA segment 11681 to 4930): Exon 1 6517 5912 ( 606 n); cDNA 41 643 ( 603 n); score: 0.826 Intron 1 5911 5875 ( 37 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.96) Exon 2 5874 5788 ( 87 n); cDNA 644 730 ( 87 n); score: 0.966 PPA cDNA 18 1 MATCH C04HBa0119A16.1- SGN-E546506+ 0.843 693 0.949 C PGS_C04HBa0119A16.1-_SGN-E546506+ (6517 5912,5874 5788) Alignment (genomic DNA sequence = upper lines): TATTATTATC CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA 6458 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||||||||| TATTATTATC CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTAT-CT CAAATTACTT 99 ATCTAAGAGT ATCTAAGAAG CTAAAATACA TAAAAAGCTA GTCTATGCCG GAACTTCAAG 6398 | ||| || | |||||||| | |||||| |||||||||| ||| |||||| ||| |||||| AACTAGGAAT GTCTAAGAA- C-AAAATAAC TAAAAAGCTA GTCCATGCCG GAAATTCAAG 157 GCATCAAGAC ATGAAGAGGA AGATCCAGTC CAAGCTAGAA GCATTAGCTC ACCCTGAA-- 6340 |||||||||| |||||| || ||| |||||| ||||||||| |||||||||| |||||||| GCATCAAGAC TTGAAGAAGA AGACCCAGTC CAAGCTAGAC GCATTAGCTC ACCCTGAATT 217 ATCCGGAGTA ATGAAGACTG GCTAGAGTTG CGGTTGAGTT GAAGACGACG GCACGTTTGC 6280 |||| | | ||||||||| |||||| | | |||||||| |||| |||| | |||||||| TTCCGATGAA GTGAAGACTG GCTAGATCTA CTGTTGAGTT GAAGTTGACG GAACGTTTGC 277 TGCACTCCAC AATGAACAAA -AAGAAAACA TACAAGTAGG GGTCACTACA AAACACAGGT 6221 |||| | ||| || |||||| | ||||||| | ||||||| ||||| ||| || |||| || TGCATTACAC AAATAACAAA GAGGAAAACA TGAAAGTAGG GGTCAGTAC- AACCACACGT 336 ACTGAGTAGG TATCATCGGC CAACTCAAAA TAGAAAACAG TATATATTAG ATAACATCAT 6161 ||||||||| |||||||||| |||||||||| ||| ||||| ||||||| | |||| | | ACTGAGTAGA TATCATCGGC CAACTCAAAA TAGGGAACAG TATATATCA- ATAATAATGT 395 AAAATCAACT ATAATACTCA ACATGCAGCA TTTACAATTA CCATAACCCT TGGTTACAAC 6101 ||||||||| | |||||||| ||||| |||| | || | | | | | | | || || -AAATCAACT ACAATACTCA ACATGTAGCA ATAAC-ACCA TGA-ATTCAT CAATAACTAC 452 -ACCAAGCAC ATCAATGAGG ACTCACGCCT CCTCATCATA CTCATTTGGG AATTAGGTTC 6042 ||| || | | |||||| ||||| |||| | | |||| |||||||||| ||||| |||| AACCGAGTTC ACACATGAGG ACTCAAGCCT CAATACCATA CTCATTTGGG AATTAAGTTC 512 ATTAGATTGA ATATATT-AA CATCTTTCAA GATTCATTAT CTTTATTCCT CTCGTGTCGG 5983 |||||||||| |||||| | ||||||||| |||||||||| |||| ||||| || ||||||| ATTAGATTGA GTATATTCAT TATCTTTCAA GATTCATTAT CTTTCTTCCT CTTGTGTCGG 572 TACGTGACAC TCCGCTCCTC ATGTACTATC CTAGTGTCAG AACGTGACAC TCCGATCCTC 5923 |||||||||| |||| ||||| | ||||| || ||| | | |||||| ||| |||||||||| TACGTGACAC TCCGATCCTC TATTTCTATC CTGGTGCCGG AACGTGGCAC TCCGATCCTC 632 ATTCTATCCT GGTGTCAAAA CGTGACACCC GATCCATATT CTATCCTGGT ACCGGAACGT 5863 |||||||||| | || |||||||||| ATTCTATCCT G......... .......... .......... ........GT ACCGGAACGT 655 GGCACCCGAT CCATATACTA TCCTGGTGTC GGAACGTGAC ACTCCGATCC TCATATACTA 5803 |||||||||| |||| | ||| |||||||||| |||||||||| |||||||||| |||||| ||| GGCACCCGAT CCATTTTCTA TCCTGGTGTC GGAACGTGAC ACTCCGATCC TCATATTCTA 715 TCCTGGTACC GGAAC 5788 |||||||||| ||||| TCCTGGTACC GGAAC 730 hqPGS_C04HBa0119A16.1-_SGN-E546506+ (6517 5912,5874 5788) ******************************************************************************** EST sequence 34 -strand 660 n (File: SGN-E349296-) 1 AATATTATCA ATACATATTA TTCGCTATTA AGAGCTTACT ACGAATATCG TAAGAGAAAC 61 CATAACCTAC CTCCACCGAA GATTCGTGAT CAAGCAAGTG ATTTCCCAAG CTTTGTGTTT 121 TTTCCTCTCG TTCGATCCTC TTTCTCGTTC GACTTTCTCT CTCTTTCTCT TGTTCTTTCT 181 ATTTTCTTTA TTCAAACCCT CTTTCTTTTA CCCTAATTAG TATATAATTA AGAATAAAAT 241 ATGGCAATAA TAACCCACTA ATTAACTTAA GGTTACCTCT TTTAACCCCC AAGTAATTAG 301 ACTTATTAAC ATTAACCCAC TAACTTTATA ATTAAAGCAG GAATAGTCAA AAACGTCCCT 361 TAAAACAATT GAGGAATTCC GACTCAGACT GGGATTTACG CAGCCTGTGA CAGCCCGTTG 421 TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC GCAAGGTTCA GAGACTGGAT TTTCACTGAA 481 GACTCTGTGA TGGTCCATCA CGCCTGTGAC GGTCCGTCTT GCCATTCCGT TACGAAGTTC 541 AGAGAGTCGA TTTTCAGTAC CCAATTTCAG ATTTCCTAAG TGTTTTGAAA TGAGACCCTG 601 CGACGGTCCG TCGTGCCCAT GATGGTCCGT CGTGGGGTCC GTCATTTCTG CCAGTTTTTC Predicted gene structure (within gDNA segment 7640 to 1615): Exon 1 5519 4871 ( 649 n); cDNA 1 658 ( 658 n); score: 0.793 MATCH C04HBa0119A16.1- SGN-E349296- 0.793 649 0.983 C PGS_C04HBa0119A16.1-_SGN-E349296- (5519 4871) Alignment (genomic DNA sequence = upper lines): AACACTACCC AATACATATC ATTCTCTATT AAGAGTTTAC TACGAATA-- GT-ATAAAAA 5463 || | || | ||||||||| |||| ||||| ||||| |||| |||||||| || | | ||| AATATTA-TC AATACATATT ATTCGCTATT AAGAGCTTAC TACGAATATC GTAAGAGAAA 59 CCATAACCTA CCTCCACCGA AGAATTTTGA TCCAGCAAGC AAATTTCCCA AGCTTT-TG- 5405 |||||||||| |||||||||| ||| | ||| || |||||| |||||||| |||||| || CCATAACCTA CCTCCACCGA AGATTCGTGA TCAAGCAAG- TGATTTCCCA AGCTTTGTGT 118 TTTTTCCTCT TCGTTCGTCT CTCTCTAGCA ATC-A-TTT- T-TC-C-CTA TCTTGTTCTT 5351 ||||||||| ||||||| |||| | | || | ||| | || | | |||||||||| TTTTTCCTC- TCGTTCGATC CTCTTTCTCG TTCGACTTTC TCTCTCTTTC TCTTGTTCTT 177 TCTATTTTTC TTATTCAAAC CATCTTTCTT TTACCCTAAT TAGCATATAA TTAAGTATAA 5291 |||||||| |||||||||| | |||||||| |||||||||| ||| |||||| ||||| |||| TCTATTTTCT TTATTCAAAC CCTCTTTCTT TTACCCTAAT TAGTATATAA TTAAGAATAA 237 AAGATGAGGA -CTTAACCCA CTAATTAACT CAAGGTTACC TCTTTTAACC CCCAAGTAAT 5232 || ||| | ||||||| |||||||||| ||||||||| |||||||||| |||||||||| AATATGGCAA TAATAACCCA CTAATTAACT TAAGGTTACC TCTTTTAACC CCCAAGTAAT 297 T-GAGTTATT AATATTAAAC CACTAACTTT ATAATTATAG CAGGAATAGT CCAAAACGTC 5173 | || ||||| || ||||| | |||||||||| ||||||| || |||||||||| | |||||||| TAGACTTATT AACATTAACC CACTAACTTT ATAATTAAAG CAGGAATAGT CAAAAACGTC 357 CCTTAAAATA TTTAAAGAAA TCCGACCTCG CTTGGGA-TT ACGCAGCCTG TGACGGGCCG 5114 |||||||| | || | ||| |||||| | ||||| || |||||||||| |||| | ||| CCTTAAAACA ATTGAGGAAT TCCGACTCAG ACTGGGATTT ACGCAGCCTG TGACAGCCCG 417 TCGTGCCTGC GACGGTCTGT CCTGCTGCTC CGTCACAGAG TTCAGAGACT CACTTTTTAT 5054 | |||||||| ||||||| || ||||| | | |||| || | |||||||||| |||| | TTGTGCCTGC GACGGTCCGT CCTGCAGGT- CGTCGCAAGG TTCAGAGACT GGATTTTCAC 476 TTAAGACCCT GTGACGGCCC GTCATGCCTG TGACGGTCCA TCCTGCACTT TTGTCACGAA 4994 | ||||| || |||| || || ||| ||||| ||||||||| || ||| || || ||||| TGAAGACTCT GTGATGGTCC ATCACGCCTG TGACGGTCCG TCTTGCCATT CCGTTACGAA 536 GTTCAGAGAG TTGA-TTTCA GTACCCAAAT TTCAGAATTT CTAAGTGTTT TGAAACGAGA 4935 |||||||||| | || ||||| |||||| ||| |||||| || |||||||||| ||||| |||| GTTCAGAGAG TCGATTTTCA GTACCC-AAT TTCAGATTTC CTAAGTGTTT TGAAATGAGA 595 CCCCCTTGAC GGTCCGTTGT GCCCATGACG GTCCGTCGTG GGATCCGTCG TCTCAGCCAG 4875 ||| ||| ||||||| || |||||||| | |||||||||| || |||||| | || ||||| -CCCTGCGAC GGTCCGTCGT GCCCATGATG GTCCGTCGTG GGGTCCGTCA TTTCTGCCAG 654 TTTT 4871 |||| TTTT 658 hqPGS_C04HBa0119A16.1-_SGN-E349296- (5519 4871) ******************************************************************************** EST sequence 35 -strand 717 n (File: SGN-E349726-) 1 TTATGTTCAT TAGATTGAGT ATATAACATC TTTCAAGATT CATTGTCTTT ATTTCTCTTG 61 TGTCGGTACG TGACATTCCG CTCCNTCATA TTCATTAATC TTCTTGTGTC GGTACGTGAT 121 ACTCTGATCC CCTAAATCTA CGTGTCGGAA CGTGACACTC CGATCCCCTA AATCTACGTG 181 TCGGTTCGTG ACACCTGATC CCCTAAATCT ACGTGTCGGT TCGTGACACC CGATCCCCTA 241 AATCTACGTG TCGGTTCGTG ACACCCGATC CCCTAAATCT ACGTGTCGGT TCGTGACACC 301 CGATCCCCTA ATCTATGTGT TGGTTCGTGA CACCTGATCC CTTAATCTAC GTGTCGGTTT 361 GTGACACCCG ATCCCCTAAT TCTACGTGTC AGTTCGTGAC ACCCGATCCC CTAATCTCAT 421 TCTATCAATT CATCAAGCCT TCTCCCTTAC CAAGGCATCA TCAATCTCAT TACTTTAGTT 481 CATCAAGCCT TCTCCCTTAC CAAGGCATCA TCATTAAAAA GAGATTAGGT TTTTACAAGA 541 TTTGGGATTC AATAACTTCA TCATGCTTAT ATAATAACAA TTATATAGTT ACATTCATGC 601 AAGCATACAA TTAAGCACAT AGCAGGGTTT ACAATATTAT CAATACATAT CATTCTCTAT 661 TAAGAGTTTA CTACGAATAT CGTAAGAGAA ACAATAACCT ACCTCCACCG AAGACTA Predicted gene structure (within gDNA segment 7465 to 4810): Exon 1 5990 5774 ( 217 n); cDNA 212 409 ( 198 n); score: 0.694 Intron 1 5773 5743 ( 31 n); Pd: 0.000 (s: 0.72), Pa: 0.000 (s: 0.26) Exon 2 5742 5440 ( 303 n); cDNA 410 714 ( 305 n); score: 0.723 MATCH C04HBa0119A16.1- SGN-E349726- 0.711 520 0.725 C PGS_C04HBa0119A16.1-_SGN-E349726- (5990 5774,5742 5440) Alignment (genomic DNA sequence = upper lines): CGTGTCGGTA CGTGACACTC CGCTCCTCAT GTACTATCCT AGTGTCAGAA CGTGACACTC 5931 ||||||||| |||||||| | || ||| | || ||| ||||| | |||||||| | CGTGTCGGTT CGTGACAC-C CGATCC-C-- CTAA-ATCTA CGTGTCGGTT CGTGACAC-C 265 CGATCCTCAT TCTATCCTGG TGTCAAAACG TGACACCCGA T-CCATATTC TATCCTGGTA 5872 |||||| | | ||| | |||| || |||||||||| | || || || ||| | || CGATCC-C-C TAAATCTACG TGTCGGTTCG TGACACCCGA TCCCCTAATC TAT-GT-GT- 320 CCGGAACGTG GCACCCGATC CATATACTAT CCTGGTGTCG GAACGTGACA CTCCGATCCT 5812 || |||| |||| |||| | | || || | |||||| | |||||| | ||||||| -TGGTTCGTG ACACCTGATC CCT-TA--AT CTACGTGTCG GTTTGTGACA C-CCGATCCC 375 CATATACTAT CCTGGTACCG GAACGTGGCA CCCGATCCAT ATACTATCCT GGTGTCGGAA 5752 | || ||| | | || | | |||| || |||||||| CTAATTCTA- CGT-GT-CAG -TTCGTGACA CCCGATCC.. .......... .......... 409 TGTGACACTC CGATCCTCAT -ATA-CTA-T CCTGGTACC- -GGAACGTGG CACCCGATCC 5697 | | | ||||| || | | | | | || | | || ||| .........C CTAATCTCAT TCTATCAATT CATCAAGCCT TCTCCCTTAC CAAGGCATCA 460 CCTAATCTCA CTACTTTAAT TCATCAAGCC TTCTTTTATA CCAAGGCATC ATCATTAACA 5637 | ||||||| ||||||| | |||||||||| |||| || |||||||||| |||||||| | TC-AATCTCA TTACTTTAGT TCATCAAGCC TTCTCCCTTA CCAAGGCATC ATCATTAA-A 518 AAGTAGATTA GGATTTCTTT TTCAAGATTT AGGATTC-AT AGCTTCATCA TGCTTATTTT 5578 ||| |||||| || | ||| | |||||||| |||||| || | |||||||| ||||||| | AAG-AGATTA GG---T-TTT TACAAGATTT GGGATTCAAT AACTTCATCA TGCTTATATA 573 ATCTCAATCA TATAATCACA -ACATGCAAA CACATAATTA AGCATATAGA AGGGTTTACA 5519 || |||| | |||| | ||| ||||||| || | ||||| |||| |||| |||||||||| ATAACAATTA TATAGTTACA TTCATGCAAG CATACAATTA AGCACATAGC AGGGTTTACA 633 ACACTACCCA ATACATATCA TTCTCTATTA AGAGTTTACT ACGAATA--G T-ATAAAAAC 5462 | | || || |||||||||| |||||||||| |||||||||| ||||||| | | | | |||| ATATTA-TCA ATACATATCA TTCTCTATTA AGAGTTTACT ACGAATATCG TAAGAGAAAC 692 CATAACCTAC CTCCACCGAA GA 5440 ||||||||| |||||||||| || AATAACCTAC CTCCACCGAA GA 714 hqPGS_C04HBa0119A16.1-_SGN-E349726- (5742 5440) ******************************************************************************** EST sequence 31 -strand 402 n (File: SGN-E357559-) 1 TGTGTTGGTT CGTGACACCT GATCCCTTAA TCTACGTGTC GGTTTGTGAC ACCCGATCCC 61 CTAATTCTAC GTGTCAGTTC GTGACACCCG ATCCCCTAAT CTCATTCTAT CAATTCATCA 121 AGCCTTCTCC CTTACCAAGG CATCATCAAT CTCATTACTT TAGTTCATCA AGCCTTCTCC 181 CTTACCAAGG CATCATCATT AAAAAGAGAT TAGGTTTTTA CAAGATTTGG GATTCAATAA 241 CTTCATCATG CTTATATAAT AACAATTATA TAGTTACATT CATGCAAGCA TACAATTAAG 301 CACATAGCAG GGTTTACAAT ATTATCAATA CATATCATTC TCTATTAAGA GTTTACTACG 361 AATATCGTAA GAGAAACAAT AACCTACCTC CACCGAAGAC TA Predicted gene structure (within gDNA segment 7165 to 4810): Exon 1 5693 5440 ( 254 n); cDNA 148 399 ( 252 n); score: 0.813 MATCH C04HBa0119A16.1- SGN-E357559- 0.813 254 0.632 C PGS_C04HBa0119A16.1-_SGN-E357559- (5693 5440) Alignment (genomic DNA sequence = upper lines): AATCTCACTA CTTTAATTCA TCAAGCCTTC TTTTATACCA AGGCATCATC ATTAACAAAG 5634 ||||||| || ||||| |||| |||||||||| | ||||| |||||||||| ||||| |||| AATCTCATTA CTTTAGTTCA TCAAGCCTTC TCCCTTACCA AGGCATCATC ATTAA-AAAG 206 TAGATTAGGA TTTCTTTTTC AAGATTTAGG ATTC-ATAGC TTCATCATGC TTATTTTATC 5575 |||||||| || ||| | ||||||| || |||| ||| | |||||||||| |||| | || -AGATTAGG- -TT--TTTAC AAGATTTGGG ATTCAATAAC TTCATCATGC TTATATAATA 261 TCAATCATAT AATCACA-AC ATGCAAACAC ATAATTAAGC ATATAGAAGG GTTTACAACA 5516 |||| |||| | | ||| | |||||| || | |||||||| | |||| ||| |||||||| | ACAATTATAT AGTTACATTC ATGCAAGCAT ACAATTAAGC ACATAGCAGG GTTTACAATA 321 CTACCCAATA CATATCATTC TCTATTAAGA GTTTACTACG AATA--GT-A TAAAAACCAT 5459 || ||||| |||||||||| |||||||||| |||||||||| |||| || | | |||| || TTA-TCAATA CATATCATTC TCTATTAAGA GTTTACTACG AATATCGTAA GAGAAACAAT 380 AACCTACCTC CACCGAAGA 5440 |||||||||| ||||||||| AACCTACCTC CACCGAAGA 399 hqPGS_C04HBa0119A16.1-_SGN-E357559- (5693 5440) ******************************************************************************** EST sequence 33 -strand 725 n (File: SGN-E546548-) 1 GGTACCGGAA CGTGGCACCC GATCCATATT CTATCCTGGT GTCGGAACGT GACACTCCGA 61 TCCTCATATT CATTCTATCC TGGTACCGGA ACGTGGCACC CGATCCCCTA ATCCATCAAG 121 CCTTCTTTTA CACTAAGGCA TCATCATTCT CATTATATAA TTTATCAAGC CTTCTTTCAT 181 ACTAAGGCAT CATCATTCTC ATTATATAAT ATATCAAGCG AATTAGGGTT CTTTCAAGAT 241 TTGGGATTCA ATTGCTTCAT CATGCTTTGT TAATTCATCG CAATTTCATA ATCATAATCA 301 TGCAAGCATA CAACTTAAGC ACATAGCAGG GTTTACAATA CTATCAACAC ATAATATTCA 361 CTATTAAGAG TTCACTACGA ATATCGTAAC ATAAACCATA ACCTACCTCC ACCGAAGAAT 421 TGAATCAACA AGCTATCTTC TCAAAATCCT TGCTATCCTC TTCGTTTCTC TCTCTCTACT 481 CGTTCGTTTC TCCTCTCTTT CTGTTCTTTT CTTTTGTTTT GTTTTATTCA AACCCTCCTT 541 CTTTTTACCC TAATTAAAAG TATAATTAAG TGTAAAGGAG GACAATAAAA CCCACTAATT 601 AACTTAAGGT TACCTCTTTT AACCCCCAAG TAATTAGACC TATTAATATT AACCCTCAAT 661 CTTTATAATT AAGGAAAGAA TAGTCCAAAA CGACCCCTAA AACGTGTAGA GGAATCCTAT 721 TTTGC Predicted gene structure (within gDNA segment 6507 to 1): Exon 1 5875 5732 ( 144 n); cDNA 1 144 ( 144 n); score: 0.771 Intron 1 5731 5695 ( 37 n); Pd: 0.000 (s: 0.56), Pa: 0.000 (s: 0.84) Exon 2 5694 5142 ( 553 n); cDNA 145 725 ( 581 n); score: 0.675 MATCH C04HBa0119A16.1- SGN-E546548- 0.694 697 0.961 C PGS_C04HBa0119A16.1-_SGN-E546548- (5875 5732,5694 5142) Alignment (genomic DNA sequence = upper lines): GGTACCGGAA CGTGGCACCC GATCCATATA CTATCCTGGT GTCGGAACGT GACACTCCGA 5816 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GGTACCGGAA CGTGGCACCC GATCCATATT CTATCCTGGT GTCGGAACGT GACACTCCGA 60 TCCTCATA-T -A--CTATCC TGGTACCGGA ACGTGGCACC CGATCCATAT ACTATCCTGG 5760 |||||||| | | |||||| |||||||||| |||||||||| |||||| | | |||| TCCTCATATT CATTCTATCC TGGTACCGGA ACGTGGCACC CGATCC-CCT A--ATCCATC 117 TGTCGGAATG TGACACTCCG ATCCTCATAT ACTATCCTGG TACCGGAACG TGGCACCCGA 5700 | | | ||||| | | |||| AAGCCTTCTT TTACACTAAG -GCATCAT.. .......... .......... .......... 144 TCCCCTAATC TCACTACTTT AATTCATCAA GCCTTCTTTT ATACCAAGGC ATCATCA-T- 5642 | || ||| || | | |||| ||||| ||||||||| |||| ||||| ||||||| | .....CATTC TCATTA-TAT AATTTATCAA GCCTTCTTTC ATACTAAGGC ATCATCATTC 198 T-A--ACAAA GTAGAT-TAG -GATTTC--- TT-TTTCAAG ATTTAGGATT C-ATAGCTTC 5592 | | | | | || || || || || || ||||||| |||| ||||| | || ||||| TCATTATATA ATATATCAAG CGAATTAGGG TTCTTTCAAG ATTTGGGATT CAATTGCTTC 258 ATCATGC-TT ATT--TT-AT CTCAATCATA TAATCACAA- CATGCAAACA CATAA-TTAA 5538 ||||||| || || || || | |||| | |||||| || ||||||| || | || |||| ATCATGCTTT GTTAATTCAT CGCAATTTCA TAATCATAAT CATGCAAGCA TACAACTTAA 318 GCATATAGAA GGGTTTACAA CACTACCCAA TACATATCAT TCTCTATTAA GAGTTTACTA 5478 ||| |||| | |||||||||| |||| ||| ||||| || || ||||||| ||||| |||| GCACATAGCA GGGTTTACAA TACTA-TCAA CACATAATAT TCACTATTAA GAGTTCACTA 377 CGAATA--GT -ATAAAAACC ATAACCTACC TCCACCGAAG AATTTTGATC CAGCAAGCAA 5421 |||||| || | | ||||| |||||||||| |||||||||| || |||| || ||||| | CGAATATCGT AACATAAACC ATAACCTACC TCCACCGAAG AA--TTGAAT CAACAAGCTA 435 ATTTCCCAAG CTTTTGTTTT TCCTCTTCGT TCGTCTCTCT CTA-GCAATC ATTTTTCC-C 5363 ||| ||| | | | |||||||||| | ||||||| ||| | || ||| ||| | TCTTCTCAAA ATCCTTGCTA TCCTCTTCGT TTCTCTCTCT CTACTCGTTC GTTTCTCCTC 495 TATCT-TGTT C-TTTC---T ATTTT-TCTT ATTCAAACCA TCTTTC-TTT TACCCTAATT 5310 | | | |||| | |||| | |||| | || ||||||||| || ||| ||| |||||||||| TCTTTCTGTT CTTTTCTTTT GTTTTGTTTT ATTCAAACCC TCCTTCTTTT TACCCTAATT 555 AGCA-TATAA TTAAGTATAA AAGATGAGGA CTTAACCCAC TAATTAACTC AAGGTTACCT 5251 | | ||||| |||||| ||| | || || | ||||||| ||||||||| |||||||||| AAAAGTATAA TTAAGTGTAA AGGAGGACAA TAAAACCCAC TAATTAACTT AAGGTTACCT 615 CTTTTAACCC CCAAGTAATT -GAGTTATTA ATATTAAACC ACTAACTTTA TAATTATAGC 5192 |||||||||| |||||||||| || ||||| ||||||| || | | ||||| |||||| | CTTTTAACCC CCAAGTAATT AGACCTATTA ATATTAACCC TCAATCTTTA TAATTAAGGA 675 AGGAATAGTC CAAAACGTCC CTTAAAATAT TTAAAGAAAT CCGACCTCGC 5142 | |||||||| ||||||| || | ||||| | || || ||| || | | || AAGAATAGTC CAAAACGACC CCTAAAACGT GTAGAGGAAT CCTATTTTGC 725 hqPGS_C04HBa0119A16.1-_SGN-E546548- (5875 5732) ******************************************************************************** EST sequence 27 -strand 481 n (File: SGN-E246710-) 1 AGTCCAAGCT AGAAGCATTA GCTCACCCTG AATTTCCGAT GTAGTAAGAC TGGCTTGAAT 61 TACTGTTGAG TTGAACACGA TGGCACGTTT GCTGCACTCC ACAAATAAAC AAGAAGAGAA 121 CATAAAAGTA GGGGTCAGTA CAAAACACGG GTACTGAGTA GATATCATCG GCCAACTCAA 181 AATAGAAATC AATATATATA CCAAGTAATA TCATAAAATC AACTATGATA CTCAACATGT 241 AGCAACAACA AATACTATAT CATTAACAAT TACCGTCAAG TTCACACATG AGGACTCAAG 301 CCTCAATACC ATACTCATTT GGGAATCATG TTCATTAGAT TGAGTATATT AACATCTTTC 361 AAGATTCATT ATCTTTATTT CTCTTGTGTC GGTACGTGAC ACTCCGCTCC CTCAATATTC 421 ATTAATCCTC TTGTGTCGGT ACGTGACACT CCGATCCCCT AAATCTATAT GTCGGTTTGT 481 G Predicted gene structure (within gDNA segment 6981 to 4655): Exon 1 6371 5965 ( 407 n); cDNA 1 410 ( 410 n); score: 0.829 MATCH C04HBa0119A16.1- SGN-E246710- 0.829 407 0.846 C PGS_C04HBa0119A16.1-_SGN-E246710- (6371 5965) Alignment (genomic DNA sequence = upper lines): AGTCCAAGCT AGAAGCATTA GCTCACCCTG AAATCCGGAG TAATGAAGAC TGGCTAGAGT 6312 |||||||||| |||||||||| |||||||||| || | | || | ||||| ||||| || | AGTCCAAGCT AGAAGCATTA GCTCACCCTG AATTTCCGAT GTAGTAAGAC TGGCTTGAAT 60 TGCGGTTGAG TTGAAGACGA CGGCACGTTT GCTGCACTCC AC-AATGAAC AAAAAGAAAA 6253 | | |||||| ||||| |||| ||||||||| |||||||||| || ||| ||| || |||| || TACTGTTGAG TTGAACACGA TGGCACGTTT GCTGCACTCC ACAAATAAAC AAGAAGAGAA 120 CATACAAGTA GGGGTCACTA CAAAACACAG GTACTGAGTA GGTATCATCG GCCAACTCAA 6193 |||| ||||| ||||||| || |||||||| | |||||||||| | |||||||| |||||||||| CATAAAAGTA GGGGTCAGTA CAAAACACGG GTACTGAGTA GATATCATCG GCCAACTCAA 180 AATAGAAAAC AGTATATAT- -TAGATAACA TCATAAAATC AACTATAATA CTCAACATGC 6135 |||||||| | | ||||||| | ||| | |||||||||| |||||| ||| ||||||||| AATAGAAATC AATATATATA CCAAGTAATA TCATAAAATC AACTATGATA CTCAACATGT 240 AGCATTTACA ATTACCATAA CCCTTGGTTA CAACACCAAG CACATCAATG AGGACTCACG 6075 |||| ||| | ||| ||| | | | | |||| || ||| |||||||| | AGCAACAACA AATACTATAT CATTAACAAT TACCGTCAAG TTCACACATG AGGACTCAAG 300 CCTCCTCATC ATACTCATTT GGGAATTAGG TTCATTAGAT TGAATATATT AACATCTTTC 6015 |||| | | |||||||||| |||||| | | |||||||||| ||| |||||| |||||||||| CCTCAATACC ATACTCATTT GGGAATCATG TTCATTAGAT TGAGTATATT AACATCTTTC 360 AAGATTCATT ATCTTTATTC CTCTCGTGTC GGTACGTGAC ACTCCGCTCC 5965 |||||||||| ||||||||| |||| ||||| |||||||||| |||||||||| AAGATTCATT ATCTTTATTT CTCTTGTGTC GGTACGTGAC ACTCCGCTCC 410 hqPGS_C04HBa0119A16.1-_SGN-E246710- (6371 5965) ******************************************************************************** EST sequence 90 +strand 337 n (File: SGN-E357033+) 1 ACTGAATAGA TATCATCGCC CAACTCAAAA TAGAAATCAA TATATATCAA GNATTATCAT 61 AAAATCAACT ATGATACTCA ACATGTAGCA ACAACAAGCA CTATATCATT AACAATTACC 121 GTCACGTTCA CACATGAGGA CTCAAGCCTC AATACCATAC TCATTTGGGA ATCATGTTCA 181 TTAGATTTAG TATATTAACA TCTTTCAAGA TTCATTATCT TTATTTCTCT TGTGACGGAA 241 CATGACATTC CGCTCCCTCA TATTCATTAA TCCTCTTGTG TGAACACATG ACACTCCGAT 301 CCCCTAAATC TACATGACAG TTTCATGAAC GCTATCC Predicted gene structure (within gDNA segment 8215 to 4266): Exon 1 6220 5965 ( 256 n); cDNA 1 256 ( 256 n); score: 0.793 MATCH C04HBa0119A16.1- SGN-E357033+ 0.793 256 0.760 C PGS_C04HBa0119A16.1-_SGN-E357033+ (6220 5965) Alignment (genomic DNA sequence = upper lines): ACTGAGTAGG TATCATCGGC CAACTCAAAA TAGAAAACAG TATATATTAG ATAACATCAT 6161 ||||| ||| |||||||| | |||||||||| |||||| || ||||||| | | ||||| ACTGAATAGA TATCATCGCC CAACTCAAAA TAGAAATCAA TATATATCAA GNATTATCAT 60 AAAATCAACT ATAATACTCA ACATGCAGCA TTTACAATTA CCATAACCCT TGGTTACAAC 6101 |||||||||| || ||||||| ||||| |||| |||| | | ||| | | | | AAAATCAACT ATGATACTCA ACATGTAGCA ACAACAAGCA CTATATCATT AACAATTACC 120 ACCAAGCACA TCAATGAGGA CTCACGCCTC CTCATCATAC TCATTTGGGA ATTAGGTTCA 6041 || | || ||||||| |||| ||||| | ||||| |||||||||| || | ||||| GTCACGTTCA CACATGAGGA CTCAAGCCTC AATACCATAC TCATTTGGGA ATCATGTTCA 180 TTAGATTGAA TATATTAACA TCTTTCAAGA TTCATTATCT TTATTCCTCT CGTGTCGGTA 5981 ||||||| | |||||||||| |||||||||| |||||||||| ||||| |||| ||| ||| | TTAGATTTAG TATATTAACA TCTTTCAAGA TTCATTATCT TTATTTCTCT TGTGACGGAA 240 CGTGACACTC CGCTCC 5965 | ||||| || |||||| CATGACATTC CGCTCC 256 hqPGS_C04HBa0119A16.1-_SGN-E357033+ (6220 5965) ******************************************************************************** EST sequence 32 -strand 239 n (File: SGN-E391780-) 1 ATCAACAAAT ACTATATCAT TAACAATTAC CGTCAAGTTC ACACATGAGG ACTCAAGCCT 61 CAATACCATA CTCATTTGGG AATCATGTTC ATTAGATTGA GTATATTAAC ATCTTTCAAG 121 ATTCATTATC TTTATTTCTC TTGTGTCGGT ACGTGACACT CCGCTCCCTC AATATTCATT 181 AATCCTCTTG TGTCGGTACG TGACACTCCG ATCCCCTAAA TCTATATGTC GGTTTGTGA Predicted gene structure (within gDNA segment 7335 to 4645): Exon 1 6087 5965 ( 123 n); cDNA 45 167 ( 123 n); score: 0.919 MATCH C04HBa0119A16.1- SGN-E391780- 0.919 123 0.515 C PGS_C04HBa0119A16.1-_SGN-E391780- (6087 5965) Alignment (genomic DNA sequence = upper lines): ATGAGGACTC ACGCCTCCTC ATCATACTCA TTTGGGAATT AGGTTCATTA GATTGAATAT 6028 |||||||||| | ||||| | |||||||| ||||||||| | |||||||| |||||| ||| ATGAGGACTC AAGCCTCAAT ACCATACTCA TTTGGGAATC ATGTTCATTA GATTGAGTAT 104 ATTAACATCT TTCAAGATTC ATTATCTTTA TTCCTCTCGT GTCGGTACGT GACACTCCGC 5968 |||||||||| |||||||||| |||||||||| || |||| || |||||||||| |||||||||| ATTAACATCT TTCAAGATTC ATTATCTTTA TTTCTCTTGT GTCGGTACGT GACACTCCGC 164 TCC 5965 ||| TCC 167 hqPGS_C04HBa0119A16.1-_SGN-E391780- (6087 5965) ******************************************************************************** EST sequence 36 -strand 236 n (File: SGN-E209683-) 1 CACAAATAAC AAGAAGATAA ACATAAAAGT AGGGGTCAGT ACAAACCACG GGTACTGAGT 61 AGATATCATC GGCCAACTCA AAATAGGGAA CAGTATGTAT TAAGCAATAT CATAAAATCA 121 ACTAATATCC TTAACATGCA GCATTTATAG TTACCATAAC CCTTGGTTAC AACACCAAGC 181 ACATCAATGA GGACTCACAC CTCCTCATCA TACTCATTTG GGAATTTAGT TCATTA Predicted gene structure (within gDNA segment 8233 to 5348): Exon 1 6272 6038 ( 235 n); cDNA 1 236 ( 236 n); score: 0.887 MATCH C04HBa0119A16.1- SGN-E209683- 0.887 235 0.996 C PGS_C04HBa0119A16.1-_SGN-E209683- (6272 6038) Alignment (genomic DNA sequence = upper lines): CACAATGAAC AAAAAGA-AA ACATACAAGT AGGGGTCACT ACAAAACACA GGTACTGAGT 6214 ||||| ||| || |||| || ||||| |||| |||||||| | ||||| ||| |||||||||| CACAAATAAC AAGAAGATAA ACATAAAAGT AGGGGTCAGT ACAAACCACG GGTACTGAGT 60 AGGTATCATC GGCCAACTCA AAATAGAAAA CAGTATATAT TAGATAACAT CATAAAATCA 6154 || ||||||| |||||||||| |||||| || |||||| ||| || || || |||||||||| AGATATCATC GGCCAACTCA AAATAGGGAA CAGTATGTAT TAAGCAATAT CATAAAATCA 120 ACTATAATAC TCAACATGCA GCATTTACAA TTACCATAAC CCTTGGTTAC AACACCAAGC 6094 |||| || | | |||||||| ||||||| | |||||||||| |||||||||| |||||||||| ACTAATATCC TTAACATGCA GCATTTATAG TTACCATAAC CCTTGGTTAC AACACCAAGC 180 ACATCAATGA GGACTCACGC CTCCTCATCA TACTCATTTG GGAATTAGGT TCATTA 6038 |||||||||| |||||||| | |||||||||| |||||||||| |||||| || |||||| ACATCAATGA GGACTCACAC CTCCTCATCA TACTCATTTG GGAATTTAGT TCATTA 236 hqPGS_C04HBa0119A16.1-_SGN-E209683- (6272 6038) ******************************************************************************** EST sequence 14 -strand 729 n (File: SGN-E351546-) 1 AGTCGTTGCT CTAGTTCTAC CCATCTGGCA AGAGAGTGAG NATGGTCAGA TACCAATTCG 61 TATCGCTTAG ATACCAATTG ACTCGAAGTA GTAGCACGAA AGAAAGAATG AAAGAGTGAA 121 GTTTTCCTAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAA GCGTCCCCCT ACCGTTCCTT 181 AAGACTCTAC TAGACTTGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 241 AGTTTTGTCA CGACCCAAAT CCGGGCCGCC ACTGGCACCC ACACTTACCC TCCTATGTGA 301 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATGTAATA GCAACAGAAA GTAATGCGGA 361 AGACTTAAAC TCATTAATAA AATCAATAAC TACTATTATT AAACATCTAT TATTCCCAAA 421 ACCTGGAAGT CATCATCACA AGAACATCTA CTTTAAACTA CTAATTCTAA GAGTTTCTAA 481 GAAGCTAAAA AATTACATAA GAAGCTAGTC CATGCCGGAA GTTCAAGGCA TCAAGACATG 541 AAGGAGAAGA TCCAGTCCAA GCTAGAAGCG TTAGCTCACC CTGAAGATCC GGTGTGACGA 601 AGACTGGCTT GAGTTACTGT TGAGTCGAAG ATGACGGCAC GTTTGCTGCA CTCCACAAAT 661 ACCAAGAAGA AAAACATAAA AGTAGGGGTC AGTACAAAAC ACGGCTACTG AGTAGATATC 721 ATCGGCCAA Predicted gene structure (within gDNA segment 10345 to 4156): Exon 1 6685 6198 ( 488 n); cDNA 246 729 ( 484 n); score: 0.858 MATCH C04HBa0119A16.1- SGN-E351546- 0.858 488 0.669 C PGS_C04HBa0119A16.1-_SGN-E351546- (6685 6198) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAAT-CGGG TCGTGACTGG CACTCACACT TACCCTCCTA TGTGAGCGAA 6627 |||||||||| ||||| |||| || ||||| ||| |||||| |||||||||| |||||||||| TGTCACGACC CAAATCCGGG CCGCCACTGG CACCCACACT TACCCTCCTA TGTGAGCGAA 305 CCAACCAATC TAAACCTTAA CATTTCAATA TAATATCAAC AGAAAGTAAT GCGGAAGACT 6567 |||||||||| |||||||||| ||||||||| ||||| |||| |||||||||| |||||||||| CCAACCAATC TAAACCTTAA CATTTCAATG TAATAGCAAC AGAAAGTAAT GCGGAAGACT 365 TAAACTCATT AATAAAAACC AATTCAATAG CTTCTAAAAG CTCAACAACT ATTATTATCC 6507 |||||||||| ||| || || |||||| || ||| | | |||| || |||| | | | TAAACTCATT AAT---AA-- AA-TCAATAA CTACTATTA- TTAAACATCT ATTA-T-T-C 415 CCAAAATCTG GAAGTCATCA TCACAAGAAC ATCTATCCTC AAATTACTAA -TCTAAGAGT 6448 |||||| ||| |||||||||| |||||||||| ||||| | | ||| |||||| ||||||||| CCAAAACCTG GAAGTCATCA TCACAAGAAC ATCTA-CTTT AAACTACTAA TTCTAAGAGT 474 ATCTAAGAAG CT--AAAA-T ACATAAAAAG CTAGTCTATG CCGGAACTTC AAGGCATCAA 6391 ||||||||| || |||| | |||||| ||| |||||| ||| |||||| ||| |||||||||| TTCTAAGAAG CTAAAAAATT ACATAAGAAG CTAGTCCATG CCGGAAGTTC AAGGCATCAA 534 GACATGAAGA GGAAGATCCA GTCCAAGCTA GAAGCATTAG CTCACCCTGA A-ATCCGGAG 6332 ||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| | |||||| | GACATGAAGG AGAAGATCCA GTCCAAGCTA GAAGCGTTAG CTCACCCTGA AGATCCGGTG 594 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GCTGCACTCC 6272 | | |||||| ||||| |||| | | |||||| | ||||| || |||||||||| |||||||||| TGACGAAGAC TGGCTTGAGT TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC 654 ACAATGAACA AAAAG-AAAA CATACAAGTA GGGGTCACTA CAAAACACAG GTACTGAGTA 6213 |||| | || | ||| |||| |||| ||||| ||||||| || |||||||| | ||||||||| ACAAATACCA AGAAGAAAAA CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA 714 GGTATCATCG GCCAA 6198 | |||||||| ||||| GATATCATCG GCCAA 729 hqPGS_C04HBa0119A16.1-_SGN-E351546- (6685 6198) ******************************************************************************** EST sequence 28 -strand 580 n (File: SGN-E356206-) 1 GAAAAGTAAA AGCGTCCCCN TACCGTCCCT TAAGACTCTA CTAGACTTGT TCTTGTGTGA 61 TGAGACCAAC GACCCTAATG CTCTGATACC AAGTTTTGTC ACGACCCAAA TCCGGGCCGC 121 CACTGGCACC CACACTTACC CTCCTATGTG AGCGAACCAA CCAATCTAAA CCTTAACATT 181 TCAATGTAAT AGCAACAGAA AGTAATGCGG AAGACTTAAA CTCATTAATA AAATCAATAA 241 CTACTATTAT TAAACATCTA TTATTCCCAA AACCTGGAAG TCATCATCAC AAGAACATCT 301 ACTTTAAACT ACTAATTCTA AGAGTTTCTA AGAAGCTAAA AAATTACATA AGAAGCTAGT 361 CCATGCCGGA AGTTCAAGGC ATCAAGACAT GAAGGAGAAG ATCCAGTCCA AGCTAGAAGC 421 GTTAGCTCAC CCTGAAGATC CGGTGTGACG AAGACTGGCT TGAGTTACTG TTGAGTCGAA 481 GATGACGGCA CGTTTGCTGC ACTCCACAAA TAACAAGAAG AAAAACATAA AAGTAGGGGT 541 CAGTACAAAA CACGGCTACT GAGTAGATAT CATCGGCCAA Predicted gene structure (within gDNA segment 8255 to 4156): Exon 1 6685 6198 ( 488 n); cDNA 97 580 ( 484 n); score: 0.860 MATCH C04HBa0119A16.1- SGN-E356206- 0.860 488 0.841 C PGS_C04HBa0119A16.1-_SGN-E356206- (6685 6198) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAAT-CGGG TCGTGACTGG CACTCACACT TACCCTCCTA TGTGAGCGAA 6627 |||||||||| ||||| |||| || ||||| ||| |||||| |||||||||| |||||||||| TGTCACGACC CAAATCCGGG CCGCCACTGG CACCCACACT TACCCTCCTA TGTGAGCGAA 156 CCAACCAATC TAAACCTTAA CATTTCAATA TAATATCAAC AGAAAGTAAT GCGGAAGACT 6567 |||||||||| |||||||||| ||||||||| ||||| |||| |||||||||| |||||||||| CCAACCAATC TAAACCTTAA CATTTCAATG TAATAGCAAC AGAAAGTAAT GCGGAAGACT 216 TAAACTCATT AATAAAAACC AATTCAATAG CTTCTAAAAG CTCAACAACT ATTATTATCC 6507 |||||||||| ||| || || |||||| || ||| | | |||| || |||| | | | TAAACTCATT AAT---AA-- AA-TCAATAA CTACTATTA- TTAAACATCT ATTA-T-T-C 266 CCAAAATCTG GAAGTCATCA TCACAAGAAC ATCTATCCTC AAATTACTAA -TCTAAGAGT 6448 |||||| ||| |||||||||| |||||||||| ||||| | | ||| |||||| ||||||||| CCAAAACCTG GAAGTCATCA TCACAAGAAC ATCTA-CTTT AAACTACTAA TTCTAAGAGT 325 ATCTAAGAAG CT--AAAA-T ACATAAAAAG CTAGTCTATG CCGGAACTTC AAGGCATCAA 6391 ||||||||| || |||| | |||||| ||| |||||| ||| |||||| ||| |||||||||| TTCTAAGAAG CTAAAAAATT ACATAAGAAG CTAGTCCATG CCGGAAGTTC AAGGCATCAA 385 GACATGAAGA GGAAGATCCA GTCCAAGCTA GAAGCATTAG CTCACCCTGA A-ATCCGGAG 6332 ||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| | |||||| | GACATGAAGG AGAAGATCCA GTCCAAGCTA GAAGCGTTAG CTCACCCTGA AGATCCGGTG 445 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GCTGCACTCC 6272 | | |||||| ||||| |||| | | |||||| | ||||| || |||||||||| |||||||||| TGACGAAGAC TGGCTTGAGT TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC 505 ACAATGAACA AAAAG-AAAA CATACAAGTA GGGGTCACTA CAAAACACAG GTACTGAGTA 6213 |||| |||| | ||| |||| |||| ||||| ||||||| || |||||||| | ||||||||| ACAAATAACA AGAAGAAAAA CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA 565 GGTATCATCG GCCAA 6198 | |||||||| ||||| GATATCATCG GCCAA 580 hqPGS_C04HBa0119A16.1-_SGN-E356206- (6685 6198) ******************************************************************************** EST sequence 29 -strand 655 n (File: SGN-E356696-) 1 CAATTGGACT CAAGTAGTAG CACGAAAGAA AGAATGAAAG AGTGAAGTTT TCCTAAAGTC 61 TTATAGCCTC TCAAGGAAAA GTAAAAGCGT CCCCCTACCG TTCCTTAAGA CTCTACTAGA 121 CTTGTTCTTG TGTGATGAGA CCAACGAACC TAATGCTCTG ATACCAAGTT TTGTCACGAC 181 CCAAATCCGG GCCGCCACTG GCACCCACAC TTACCCTCNT ATGTGAGCGA ACCAACCAAT 241 CTAAACCTTA ACATTTCAAT GTAATAGCAA CAGAAAGTAA TGCGGAAGAC TTAAACTCAT 301 TAATAAAATC AATAACTACT ATTATTAAAC ATCTATTATT CCCAAAACCT GGAAGTCATC 361 ATCACAAGAA CATCTACTTT AAACTACTAA TTCTAAGAGT TTCTAAGAAG CTAAAAAATT 421 ACATAAGAAG CTAGTCCATG CCGGAAGTTC AAGGCATCAA GACATGAAGG AGAAGATCCA 481 GTCCAAGCTA GAAGCGTTAG CTCACCCTGA AGATCCGGTG TGACGAAGAC TGGCTTGAGT 541 TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC ACAAATAACA AGAAGAAAAA 601 CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA GATATCATCG GCCAA Predicted gene structure (within gDNA segment 9438 to 4156): Exon 1 6685 6198 ( 488 n); cDNA 172 655 ( 484 n); score: 0.858 MATCH C04HBa0119A16.1- SGN-E356696- 0.858 488 0.745 C PGS_C04HBa0119A16.1-_SGN-E356696- (6685 6198) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAAT-CGGG TCGTGACTGG CACTCACACT TACCCTCCTA TGTGAGCGAA 6627 |||||||||| ||||| |||| || ||||| ||| |||||| ||||||| || |||||||||| TGTCACGACC CAAATCCGGG CCGCCACTGG CACCCACACT TACCCTCNTA TGTGAGCGAA 231 CCAACCAATC TAAACCTTAA CATTTCAATA TAATATCAAC AGAAAGTAAT GCGGAAGACT 6567 |||||||||| |||||||||| ||||||||| ||||| |||| |||||||||| |||||||||| CCAACCAATC TAAACCTTAA CATTTCAATG TAATAGCAAC AGAAAGTAAT GCGGAAGACT 291 TAAACTCATT AATAAAAACC AATTCAATAG CTTCTAAAAG CTCAACAACT ATTATTATCC 6507 |||||||||| ||| || || |||||| || ||| | | |||| || |||| | | | TAAACTCATT AAT---AA-- AA-TCAATAA CTACTATTA- TTAAACATCT ATTA-T-T-C 341 CCAAAATCTG GAAGTCATCA TCACAAGAAC ATCTATCCTC AAATTACTAA -TCTAAGAGT 6448 |||||| ||| |||||||||| |||||||||| ||||| | | ||| |||||| ||||||||| CCAAAACCTG GAAGTCATCA TCACAAGAAC ATCTA-CTTT AAACTACTAA TTCTAAGAGT 400 ATCTAAGAAG CT--AAAA-T ACATAAAAAG CTAGTCTATG CCGGAACTTC AAGGCATCAA 6391 ||||||||| || |||| | |||||| ||| |||||| ||| |||||| ||| |||||||||| TTCTAAGAAG CTAAAAAATT ACATAAGAAG CTAGTCCATG CCGGAAGTTC AAGGCATCAA 460 GACATGAAGA GGAAGATCCA GTCCAAGCTA GAAGCATTAG CTCACCCTGA A-ATCCGGAG 6332 ||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| | |||||| | GACATGAAGG AGAAGATCCA GTCCAAGCTA GAAGCGTTAG CTCACCCTGA AGATCCGGTG 520 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GCTGCACTCC 6272 | | |||||| ||||| |||| | | |||||| | ||||| || |||||||||| |||||||||| TGACGAAGAC TGGCTTGAGT TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC 580 ACAATGAACA AAAAG-AAAA CATACAAGTA GGGGTCACTA CAAAACACAG GTACTGAGTA 6213 |||| |||| | ||| |||| |||| ||||| ||||||| || |||||||| | ||||||||| ACAAATAACA AGAAGAAAAA CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA 640 GGTATCATCG GCCAA 6198 | |||||||| ||||| GATATCATCG GCCAA 655 hqPGS_C04HBa0119A16.1-_SGN-E356696- (6685 6198) ******************************************************************************** EST sequence 94 +strand 710 n (File: SGN-E392027+) 1 CCACAGCCCC AGTGGCTGGC TCAGTCGCAC CCTGTCCCGC CGGTGCTGGT GTTGATGCTG 61 GCGTAGTCGT TGCTCTAGTT CTAACCATCT GCGAAATAGA GTGAAGATGG TCAGATACCA 121 ATTTGTATCA CCTAGATACC AATTGGACCC AAGTAATAGC ACGAAAGAAG AAAGAATGGA 181 ATTTTCCAAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAG GCATCCCCCT ACCGTTCCTT 241 AAGACTCTAC TAGACTCGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 301 AGTTTGTCAC GACCAAAACC GGGTTGCGAC TGGCACCCAC ACTTACCCTC CTATGTGAGC 361 GAACCAACCA ATCTAACCTT AACATTTCAA TATAATATCA ACAGAAAGTA ATGTGGAAGA 421 CTTAAACTCA TTAAATACAG ACCAATTCAT TAACTTCTAA AATTCAACAT CTATTATTCC 481 CCAAAATCTG GAAGTCATCA CCACAAGAAC ATCTACGATC AAATGACTAA ACTAAGAGTA 541 GTCTAAAAGC TAAAAATACA TAAGAAGCTA GTCCATGCCG GAAGTTCAAG GCATCAAGAC 601 TTGAAGAAGA AGATCCAGTC CAAGCTAGAA GCATTAGCTC ACCCTGAATT TCCGATGTAG 661 TAAGACTGGC TTGAATTACT GTTGAGTTGA ACACGATGGC ACGTTTGCTG Predicted gene structure (within gDNA segment 10622 to 5110): Exon 1 6685 6278 ( 408 n); cDNA 305 710 ( 406 n); score: 0.879 MATCH C04HBa0119A16.1- SGN-E392027+ 0.879 408 0.575 C PGS_C04HBa0119A16.1-_SGN-E392027+ (6685 6278) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAATCGGGT CGTGACTGGC ACTCACACTT ACCCTCCTAT GTGAGCGAAC 6626 |||||||||| ||| ||||| | ||||||| || ||||||| |||||||||| |||||||||| TGTCACGACC AAAACCGGGT TGCGACTGGC ACCCACACTT ACCCTCCTAT GTGAGCGAAC 364 CAACCAATCT AAACCTTAAC ATTTCAATAT AATATCAACA GAAAGTAATG CGGAAGACTT 6566 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CAACCAATCT -AACCTTAAC ATTTCAATAT AATATCAACA GAAAGTAATG TGGAAGACTT 423 AAACTCATT- AATAAAAACC AATTCAATAG CTTCTAAAAG CTCAACAACT ATTATTATCC 6507 ||||||||| |||| | ||| |||||| || ||||||||| |||||| || |||| | ||| AAACTCATTA AATACAGACC AATTCATTAA CTTCTAAAA- TTCAACATCT ATTA-T-TCC 480 CCAAAATCTG GAAGTCATCA TCACAAGAAC ATCTATCCTC AAATTACTAA TCTAAGAGTA 6447 |||||||||| |||||||||| ||||||||| ||||| || |||| ||||| ||||||||| CCAAAATCTG GAAGTCATCA CCACAAGAAC ATCTACGATC AAATGACTAA ACTAAGAGTA 540 -TCTAAGAAG CT-AAAATAC ATAAAAAGCT AGTCTATGCC GGAACTTCAA GGCATCAAGA 6389 ||||| ||| || ||||||| |||| ||||| |||| ||||| |||| ||||| |||||||||| GTCTAA-AAG CTAAAAATAC ATAAGAAGCT AGTCCATGCC GGAAGTTCAA GGCATCAAGA 599 CATGAAGAGG AAGATCCAGT CCAAGCTAGA AGCATTAGCT CACCCTGAAA TCCGGAGTAA 6329 | |||||| | |||||||||| |||||||||| |||||||||| ||||||||| | | || | CTTGAAGAAG AAGATCCAGT CCAAGCTAGA AGCATTAGCT CACCCTGAAT TTCCGATGTA 659 TGAAGACTGG CTAGAGTTGC GGTTGAGTTG AAGACGACGG CACGTTTGCT G 6278 |||||||| || || || | ||||||||| || |||| || |||||||||| | GTAAGACTGG CTTGAATTAC TGTTGAGTTG AACACGATGG CACGTTTGCT G 710 hqPGS_C04HBa0119A16.1-_SGN-E392027+ (6685 6278) ******************************************************************************** EST sequence 70 +strand 840 n (File: SGN-E542084+) 1 TTTTTTTTTT TAGGGGAAAA TTTCTTACTT CTATAAATGT CACGACCCAA ATCGGATCGC 61 GACTGGCACC CACACTTACC CTGCTATGTG AGCGAACCAA CCAATCCAAA CCTTAACATT 121 TCAATGTAAT ATCAACATAA AGTAATGCGG AAGACTTAAA CTTATTAATG AAAACCAATT 181 CAATAACTAT TATTTCCCAA AATCTGGAAG TCATCATCAT AAGAACATCT ACTTCAAATT 241 ACTAAATCTA AGAGTTTCTA AGAAGCTAAA AAATACATAA AAGCTAGTCC ATGCCGGAAC 301 TTCAAGACAT CAAGACATGA AGAGGAAGAT CCAGTCCAAT CTAGAAAGCA TTAGCTCACC 361 CTGATATCCG AAGTAATGAA GACTGGCTAG AGTTACTGTT GAGTCGAAGA TGACGGCACG 421 TTTGCTAAAA TCAGTGGACG GAGGAGAAGG GAAAGCACAC CGGGAATGAG AAGAAGCTGA 481 AGGAGGAACC AAAGAGGAAT CCCATTGCAA AGTAAATGAG AGTGTAAGCT AGCAGACGCG 541 ATGGAAGAGC TTACGCAGAA ATAACACTCT CATTTGGTGA TTTAGTTTGG AGATCATCTG 601 AGACCTTCGT GTTGGACAAC ATCATCCATG AAGATGTCAT TAGAAAAGTT AGATGCTTTA 661 TATACATGTT GATAGTTCCT GACTACTCTA TTTCTTTTTC AGAAAGCCCC GAAATTTCTC 721 AGATGATAAA TGCTGTCTGT TTTGGAAAAC CATCTCTATG CAAAGATGAT GTTTGCTGCA 781 TTGAGGTGTC AATATTGGGA ATTTCAAGAA AATTATGCCT TGTAGAATAT GTACAGCAAC Predicted gene structure (within gDNA segment 8069 to 1241): Exon 1 6685 6279 ( 407 n); cDNA 38 426 ( 389 n); score: 0.871 PPA cDNA 11 1 MATCH C04HBa0119A16.1- SGN-E542084+ 0.871 407 0.485 C PGS_C04HBa0119A16.1-_SGN-E542084+ (6685 6279) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAATCGGGT CGTGACTGGC ACTCACACTT ACCCTCCTAT GTGAGCGAAC 6626 |||||||||| |||||||| | || ||||||| || ||||||| ||||| |||| |||||||||| TGTCACGACC CAAATCGGAT CGCGACTGGC ACCCACACTT ACCCTGCTAT GTGAGCGAAC 97 CAACCAATCT AAACCTTAAC ATTTCAATAT AATATCAACA GAAAGTAATG CGGAAGACTT 6566 ||||||||| |||||||||| |||||||| | |||||||||| ||||||||| |||||||||| CAACCAATCC AAACCTTAAC ATTTCAATGT AATATCAACA TAAAGTAATG CGGAAGACTT 157 AAACTCATTA ATAAAAACCA ATTCAATAGC TTCTAAAAGC TCAACAACTA TTATTATCCC 6506 ||||| |||| || ||||||| |||| | | | ||||| ||||| | || AAACTTATTA ATGAAAACCA ATTC-A-A-- ---T------ -----AACTA TTATT-T-CC 197 CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACT-AA TCTAAGAGTA 6447 |||||||||| |||||||||| || ||||||| |||| | ||| ||||||| || ||||||||| CAAAATCTGG AAGTCATCAT CATAAGAACA TCTA-CTTCA AATTACTAAA TCTAAGAGTT 256 TCTAAGAAGC TAAAATACAT A-AAAAGCTA GTCTATGCCG GAACTTCAAG GCATCAAGAC 6388 |||||||||| ||||| | | | |||||||| ||| |||||| |||||||||| ||||||||| TCTAAGAAGC TAAAAAATAC ATAAAAGCTA GTCCATGCCG GAACTTCAAG ACATCAAGAC 316 ATGAAGAGGA AGATCCAGTC CAAGCTAG-A AGCATTAGCT CACCCTGAAA TCCGGAGTAA 6329 |||||||||| |||||||||| ||| |||| | |||||||||| |||||||| | |||| ||||| ATGAAGAGGA AGATCCAGTC CAATCTAGAA AGCATTAGCT CACCCTGATA TCCGAAGTAA 376 TGAAGACTGG CTAGAGTTGC GGTTGAGTTG AAGACGACGG CACGTTTGCT 6279 |||||||||| |||||||| | ||||||| | |||| ||||| |||||||||| TGAAGACTGG CTAGAGTTAC TGTTGAGTCG AAGATGACGG CACGTTTGCT 426 hqPGS_C04HBa0119A16.1-_SGN-E542084+ (6685 6279) ******************************************************************************** EST sequence 38 +strand 679 n (File: SGN-E370357+) 1 TTTTTTTTTT CTTACAATTA TATTATGAAT TCGATAATCT TTAATGTCAC GACCCAAATC 61 GAGCCGCAAG TGGCACCCAC ACTTACCCTC CTATGTGAGC GAACCAACCA ATACAAAATC 121 CAACATTTCA ATATAATGAC GGAATATAAT GCGGAAGACT TAAACTCATT AATGAAAATC 181 AATTAAATAA CTTCTAAAAA CTCAACAACT ATTATTATCC CCAAAATCTG GAAGTCATCA 241 TCACAAGAAC ATCTATCCTC AAATTACTAA TTCTAAGAGT ATCTAGAAAG CTAGAATAAC 301 TAAAAAGCTA GTCCATGCCG GAACTTCAAG GCATCAAGAC ATGAAGAAGA AGATCCAGTC 361 CAAGCTAGAA GCGTTAGCTC ACACTGAAAT CCGGTATAAT GAAGACTGGC TAGAGTTGCG 421 GTTGAGTTGA AGACGACGGT ACGTTTGCTT TATTCGAGTG TCAATTAATC ATTCGGCTGT 481 CACCCAAATA TTATTGATTG ATTACACCTC TGCCATTTGT AAAATTTTTC AAATTTGCCT 541 ACGGATGCAG AATTTTCCTC GAATTTCTGA TGTGTTTTCT TGTAAATAGT GGCCATTTGT 601 GTAAGTAAAT GCCCATTTCT CCTCCTACAA AGTCCAATTC CATTTTTCCC CCAATCCACC 661 ATGGCAACAC CACCTCCAA Predicted gene structure (within gDNA segment 7725 to 3279): Exon 1 6685 6279 ( 407 n); cDNA 45 449 ( 405 n); score: 0.905 PPA cDNA 13 1 MATCH C04HBa0119A16.1- SGN-E370357+ 0.905 407 0.599 C PGS_C04HBa0119A16.1-_SGN-E370357+ (6685 6279) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAATCGGGT CGTGACTGGC ACTCACACTT ACCCTCCTAT GTGAGCGAAC 6626 |||||||||| ||||||| | || | |||| || ||||||| |||||||||| |||||||||| TGTCACGACC CAAATCGAGC CGCAAGTGGC ACCCACACTT ACCCTCCTAT GTGAGCGAAC 104 CAACCAATCT AAACCTTAAC ATTTCAATAT AATATCAACA GAAAGTAATG CGGAAGACTT 6566 |||||||| ||| ||| |||||||||| | || || ||| ||||| |||||||||| CAACCAATAC AAAATCCAAC ATTTCAATAT -A-AT-GACG GAATATAATG CGGAAGACTT 161 AAACTCATTA ATAAAAACCA ATTCAATAGC TTCTAAAAGC TCAACAACTA TTATTATCCC 6506 |||||||||| || |||| || ||| |||| | |||||||| | |||||||||| |||||||||| AAACTCATTA ATGAAAATCA ATTAAATAAC TTCTAAAAAC TCAACAACTA TTATTATCCC 221 CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAA- TCTAAGAGTA 6447 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAT TCTAAGAGTA 281 TCTAAGAAGC TAAAATACAT AAAAAGCTAG TCTATGCCGG AACTTCAAGG CATCAAGACA 6387 |||| |||| || |||| | |||||||||| || ||||||| |||||||||| |||||||||| TCTAGAAAGC TAGAATAACT AAAAAGCTAG TCCATGCCGG AACTTCAAGG CATCAAGACA 341 TGAAGAGGAA GATCCAGTCC AAGCTAGAAG CATTAGCTCA CCCTGAAATC CGGAGTAATG 6327 |||||| ||| |||||||||| |||||||||| | |||||||| | |||||||| ||| ||||| TGAAGAAGAA GATCCAGTCC AAGCTAGAAG CGTTAGCTCA CACTGAAATC CGGTATAATG 401 AAGACTGGCT AGAGTTGCGG TTGAGTTGAA GACGACGGCA CGTTTGCT 6279 |||||||||| |||||||||| |||||||||| |||||||| | |||||||| AAGACTGGCT AGAGTTGCGG TTGAGTTGAA GACGACGGTA CGTTTGCT 449 hqPGS_C04HBa0119A16.1-_SGN-E370357+ (6685 6279) ******************************************************************************** EST sequence 12 -strand 405 n (File: SGN-E336814-) 1 TTTTTTTTTT TAATAAAATC AATAACTATT ATTATCCCCA AAATCTGGAA GTCATCACCA 61 CAAGAACATC TATGATCAAA GTACTAAACT AAGAGTGTTC TAAAAAGCTA AAATACAAGA 121 AAGCTAGTCC ATGCCGGAAC TTCAAGACAT CAAGACATGA AGAGGAAGAT CCAGTCCAAG 181 CTAGAAACAT TAGCTCACCT TAATATCCGG AATAATGAAG ACTGGCTAGA GTTACTGTTG 241 AGTCGAAGAT GACGGCACGT TTGCTCTCTT GTGTGATTTG CAAGCTATTG CAAAGGAGTA 301 GTTGCGGGTT TCCTTGTCAT AAAAAATAAT GCAAGGGAAA GCAGAAGATA ATGAAAATTA 361 GCAATATGTC AATCCATGAT CATGAAGTGC TTTGTTTGCT TTGGG Predicted gene structure (within gDNA segment 7360 to 3568): Exon 1 6535 6279 ( 257 n); cDNA 9 265 ( 257 n); score: 0.889 MATCH C04HBa0119A16.1- SGN-E336814- 0.889 257 0.635 C PGS_C04HBa0119A16.1-_SGN-E336814- (6535 6279) Alignment (genomic DNA sequence = upper lines): TTCTAAAAGC TCAACAACTA TTATTATCCC CAAAATCTGG AAGTCATCAT CACAAGAACA 6476 || | || |||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| TTTAATAAAA TCAATAACTA TTATTATCCC CAAAATCTGG AAGTCATCAC CACAAGAACA 68 TCTATCCTCA AATTACTAAT CTAAGAGT-A TCTAAGAAGC TAAAATACAT AAAAAGCTAG 6417 ||||| ||| || |||||| |||||||| ||||| |||| ||||||||| | |||||||| TCTATGATCA AAGTACTAAA CTAAGAGTGT TCTAAAAAGC TAAAATACA- AGAAAGCTAG 127 TCTATGCCGG AACTTCAAGG CATCAAGACA TGAAGAGGAA GATCCAGTCC AAGCTAGAAG 6357 || ||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCCATGCCGG AACTTCAAGA CATCAAGACA TGAAGAGGAA GATCCAGTCC AAGCTAGAAA 187 CATTAGCTCA CCCTGAAATC CGGAGTAATG AAGACTGGCT AGAGTTGCGG TTGAGTTGAA 6297 |||||||||| || | | ||| |||| ||||| |||||||||| |||||| | | |||||| ||| CATTAGCTCA CCTTAATATC CGGAATAATG AAGACTGGCT AGAGTTACTG TTGAGTCGAA 247 GACGACGGCA CGTTTGCT 6279 || ||||||| |||||||| GATGACGGCA CGTTTGCT 265 hqPGS_C04HBa0119A16.1-_SGN-E336814- (6535 6279) ******************************************************************************** EST sequence 4 -strand 707 n (File: SGN-E550077-) 1 TTTTTTTTTT TTTTAAGAGG GATAAAAGGG GTGACCGAGG CCAACATAGG CCACCTACGT 61 ATCTCATTCT TGAGAATTCA GGTTAGACGT AGTTCATTAC AAATGGATAA ATTCTAAGCT 121 TAACTATTAC AAATGAATAA AAGAGATTAC AAGGAAATGA TAGAAATCAA GCTTTCCAAC 181 ATGATGTCTT TCGACAACAT TTGAGTAAAT TGATGACTTG TGAGACCTAA TGTTCATGCT 241 CAACCTTATA ATATCATCAA ATAAATGTAT TGATGTGATT GCTAAGCGAA CCGATGAGAT 301 CTCTCTCGTG TGCTATTGTC AGATAGGCAC CAATTTAATT TCTTTGATGC ATTCATCATT 361 TTCTTGATTC ATTATTCCAA TCTCTTCTGA ATTCGACTCT TTGTGACTTT TGAACTGTCT 421 GAATTCATCA ACCACTGTTT GGGTACAATG ATCTTCTTAC TGTAGTCCTC AAACTCGTCT 481 GCATCTACCC CATTTCGTTC ATTCAACTTG TGATATGACA TGATATTGAT AGATTTAAAA 541 ATATTTTCAC CTGATATCCG GAGTAATGAA GACTGGCTAG AGTTGCGGTT GAGTTGAAGA 601 CGACGGTACG TTTGCCATTT TAAATGATGT TTGGCCGAAG TCTAATCTTT CCGGTGAAAT 661 CTCACTTCAA TGGAGTATTA GGACTGGATG TGGTCATTTT TATTCTT Predicted gene structure (within gDNA segment 11681 to 4679): Exon 1 10591 10575 ( 17 n); cDNA 533 549 ( 17 n); score: 0.706 Intron 1 10574 6346 (4229 n); Pd: 0.850 (s: 0), Pa: 0.000 (s: 0.98) Exon 2 6345 6280 ( 66 n); cDNA 550 615 ( 66 n); score: 0.970 PPA cDNA 14 1 MATCH C04HBa0119A16.1- SGN-E550077- 0.970 83 0.117 C PGS_C04HBa0119A16.1-_SGN-E550077- (10591 10575,6345 6280) Alignment (genomic DNA sequence = upper lines): ATAGAGAACT ACTTTCAGTA AACAGTTGAT TATTGGGTTT GAATTCTCGT TGCTTTTCCT 10532 || | || | | ||||| ATTTAAAAAT ATTTTCA... .......... .......... .......... .......... 549 CTTGTACTAG TAAAGCAAAA GCTTGTGCCA AAGATGGTAA GGGATTCATC ATCAAAATAC 10472 .......... .......... .......... .......... .......... .......... 549 TTCCCCTAAT AATAGTATAT ACCACATTTA AGCCCATCAA AAACTGAATC AAACGCCTAT 10412 .......... .......... .......... .......... .......... .......... 549 CTTTCTCCGC CTTCTGAACA TTAGTTTTAG CTCCACACAC ACACACAATT ACACTAACTT 10352 .......... .......... .......... .......... .......... .......... 549 AAAACACATA TACTGTTGAA TTCCTCCCAA AGTTTCTTCA TAGGAGTGTA ATATATTGTG 10292 .......... .......... .......... .......... .......... .......... 549 ATATCGAGAA TACCTTGATT AAGATCATTT ATTTCCTTCT GAGTTTGGTA AAATTTTGCT 10232 .......... .......... .......... .......... .......... .......... 549 CCATTTGTCT GATCATATCG ATCCTCCAGT TCTGTCCACA ATTCCAGAGC ATCATTGACA 10172 .......... .......... .......... .......... .......... .......... 549 TATTCAACAC TATCAACAAT ATCTCGATAC AGAGAGTTGA GAATCCAGGA AGTAACCATA 10112 .......... .......... .......... .......... .......... .......... 549 TCATCACACC TCACCCATTG ATGATAAGTG GAATGATTCA CCTCTGGTCT CTTACACTCA 10052 .......... .......... .......... .......... .......... .......... 549 CCATTGATGA ACACTAGTTT GTTCTTCACT GACAAAGAAT GAAGTACACT ACGACGCCAT 9992 .......... .......... .......... .......... .......... .......... 549 GAATGAAAAC CAGTACTATT AAAAGGAACT GGTACAAGTA CTGCTCCAAG ATTATCTGAG 9932 .......... .......... .......... .......... .......... .......... 549 GATGACTGTA GAAATGACTC CCTGTATCAG TCCCAGATGA AGGAATACTG GCTGAACCAG 9872 .......... .......... .......... .......... .......... .......... 549 TGCTCGTAGA AGTAGGATCT ACCATTTTTA TCACAAAGAA AATTCGAAGG TTTACAGAGA 9812 .......... .......... .......... .......... .......... .......... 549 ATGAAATATG AAGATCTGAT GCGAAAATTG AAAAAGAAAG AAGCAGGAAA GATCAGAAAC 9752 .......... .......... .......... .......... .......... .......... 549 GTCCTCACTC TGATACCATG TTAATGTTGA AGATGATTGA AAACCTCCAT TGATGAGAAT 9692 .......... .......... .......... .......... .......... .......... 549 ATGAAAGCTT GATCAGAGAA GAGCATTGAA AATGTGTGCT ATTTTCATTG AGAACAGAAA 9632 .......... .......... .......... .......... .......... .......... 549 CATGAATGTG CAGTATTTAT ATAACAACTA AAGCAGAAAA TATCTAACTA ACTTTCTGAA 9572 .......... .......... .......... .......... .......... .......... 549 AATGAAAACT AACTAACTAA CTGATTTTTG ACAGCTAACT AACTATTCTA ACAACCTGAT 9512 .......... .......... .......... .......... .......... .......... 549 TAATTAAGCA TAATTACAAA TTTAATCTCA ATAAACATTC TTAACTTTAC ACTTTAATTA 9452 .......... .......... .......... .......... .......... .......... 549 CTTTGTTGCG ACATTTCGAT TAAAGCTTGT TGTGTGAAGT ACCACAACTA AAAAAATAGT 9392 .......... .......... .......... .......... .......... .......... 549 ATGCAGATTA TGCAATGTCG CATGATTAAC AAATAAGAAA ATCTATAAGC CGTAGTTTTG 9332 .......... .......... .......... .......... .......... .......... 549 TAATTTGATA CAAATAAATA ATTTTTTTCT TGAAGTTCTT GTGATTTAGC ATGACTATGA 9272 .......... .......... .......... .......... .......... .......... 549 AGAAATTATT TTTTTAAAAT ATATCAAATG AGTCGTGTAT TCGATCACGA CAAACAATTA 9212 .......... .......... .......... .......... .......... .......... 549 TGTAAATGGA GAAACGAATG TTTGCATTAG CCACTGATGG TAATTTGAAG AGAATGAAAA 9152 .......... .......... .......... .......... .......... .......... 549 TTATCAACCT CTAAATGTTG GTGTTGTGAA ACACAACAAA TGAAACAATG TTTCACCTAT 9092 .......... .......... .......... .......... .......... .......... 549 ATCTAGCAGC TTCTATAGCC CAAAATCTAT GGAGGTATTT TCCTTCATGT GCAAGTGTAG 9032 .......... .......... .......... .......... .......... .......... 549 ATATAGAAGG TAGAAACCTA TTGCAGACCA TAAATTATTG GTGGTATATG TTGAAGCCCC 8972 .......... .......... .......... .......... .......... .......... 549 TAACAAGTTT AGGATTTTCC TTAGAGCTAT ACCAACATTG ATAATGTGGA GCTTATGGAA 8912 .......... .......... .......... .......... .......... .......... 549 GAGGCGAAAT CATATTATGC ATGGAGGACA ACTTAACTTC GAAGGACTGA TACAACAAGT 8852 .......... .......... .......... .......... .......... .......... 549 AACAAAAAAA CATCTAGTGG CTGAAAACGA TAAGAACTTA AGTTTTAACC TAATTGGAAA 8792 .......... .......... .......... .......... .......... .......... 549 GACATGGTCT GAGGTGGTTA ATATATTAGG ATTCTACAAG TCTAAAATAT ACTATCACAA 8732 .......... .......... .......... .......... .......... .......... 549 TGTTGAGAGG AAGGCACCAA ATATTGATCA AGTGAAATGC AAAAAAGCAG GAGTTCTGTT 8672 .......... .......... .......... .......... .......... .......... 549 TCAGCGACAT GATGAAGATA TTAGGTCTGC TCAAGCTAAA GAAATAGGAC TTGACACAAA 8612 .......... .......... .......... .......... .......... .......... 549 CATAGAAGCA GAGCCCACAA CAATTCAAGA AGCTTTGGAA ATCGAAGAGA TTTCAAAATC 8552 .......... .......... .......... .......... .......... .......... 549 TCTTATTTGA AAAGAACATC ATACAAATGA CATAGAGGAT ATCATGAAAA ATTGCAAAAA 8492 .......... .......... .......... .......... .......... .......... 549 TAATTGAGGA CATAATGAAA TAAATGCAGA CACAGAAGGA TAAAATCAAA CATATTTTCA 8432 .......... .......... .......... .......... .......... .......... 549 GAAGACAATT CAATAGAAGA TTATTTAGCT AACCTAGCTA TTAAAAAAAC AGATATACAA 8372 .......... .......... .......... .......... .......... .......... 549 GAATTCAATG AATTTGCATA ATTACCAATA ACAGACAAAC ACATTATAAA TATGGAAAAA 8312 .......... .......... .......... .......... .......... .......... 549 ACACAGATTC CAACCATATA GAATAAGAAC ATGGAAAATT AGACCGAATA AAAATACAAA 8252 .......... .......... .......... .......... .......... .......... 549 TCCAGACATA TAGACAAACA AGGAAGGGGA ACAACAAAGC AACTTACATA AAAGTAAGCC 8192 .......... .......... .......... .......... .......... .......... 549 CGCAGAAAGG GATCATTAAA ATTGACAAAA TAAAGTTTTT CTTAATCTAT GTTAGTACAC 8132 .......... .......... .......... .......... .......... .......... 549 AAAAACTTTC AAAAAAAAAG GAGTACTCTT CATCTATAAC ATTCAAGCAT CGATTGTTAG 8072 .......... .......... .......... .......... .......... .......... 549 TTTTATGGCC CACGTGTGTT AATTTTTATG GTCCACGTTA ATATTGTTTA GTTTAATATT 8012 .......... .......... .......... .......... .......... .......... 549 TAATTACTAA TTAAATTCAA ATTCTAATTA GATAATTGGA GAAGTTACTG ACATGTGTGG 7952 .......... .......... .......... .......... .......... .......... 549 AGAACTGGGG AAGTAAGTTT GTAACTTCCA ACCACCCATT AAGTCTTTCA CTTTACCCAT 7892 .......... .......... .......... .......... .......... .......... 549 TATCTCTTCT AATTACCCAT TAAGTAGGGA GTTACTTGGT AGTTTTAAAA CTATCCATTA 7832 .......... .......... .......... .......... .......... .......... 549 TCTCCACTGC TCACCATGAT GGAAAGGTGT GAATGATGTT AAACACAATC TTATCTTAAA 7772 .......... .......... .......... .......... .......... .......... 549 GGGTCCTCTG TCTTCCATAA AGTTATGGTC TTATCCATCA AAACTATTCA TAAAGTATAA 7712 .......... .......... .......... .......... .......... .......... 549 CGCAAGAGAG ATAAACAACT TTTGAAGAAT GAAAACAAAA AGGCTTCCGC TCAATTAAAG 7652 .......... .......... .......... .......... .......... .......... 549 TTAAGATTCT TAAAAAATAA CTAGGTTGAC TCGGGTATGT ATTCTTGACT GAATTATTAT 7592 .......... .......... .......... .......... .......... .......... 549 AGTAATAAAT TTGTGTAAAA ATCATATAGT TCTAAGATCA TGAATAATTT ATAGGATTCA 7532 .......... .......... .......... .......... .......... .......... 549 TGAATGCATA GATTGTTTAT GTTTTCACAA TCATTAAAAT CCTAACATGT GGTATCAGAG 7472 .......... .......... .......... .......... .......... .......... 549 CCTGATTTAA GAACTAGTGA CTTTTCATAA AATTAATGTT TTCCTTATTT GAAAATGGTA 7412 .......... .......... .......... .......... .......... .......... 549 ATAGGTAGTA TTAAGTGAAA TAATTATTCA CTATCATGAT GTATTTTATT TTGAAATTAC 7352 .......... .......... .......... .......... .......... .......... 549 GTATATGAAA TCAGTTAATC AGCAAAATGG TCTAATCTTT GAAGAATTAA TTCAAAATAA 7292 .......... .......... .......... .......... .......... .......... 549 TAATGACTAA ACATATATTT AATTATCCAT TTTTTTATGC TTATAACTTA TACAACACTT 7232 .......... .......... .......... .......... .......... .......... 549 ACGGATATAT TGAAGTTTTT GGTTCTAACA TATTTATGGA TTACCCAAAG ATTGATTATT 7172 .......... .......... .......... .......... .......... .......... 549 TCATCTTATA ACCATTGAAC ATTAAAGAGA TAATTTGGAT GTGTCGTTAG TTTTATTTAT 7112 .......... .......... .......... .......... .......... .......... 549 TTAGTCAAAG ATGATATATT TTATTGATTG ACACATTAAA ATTATTGAAT TAAGTTAAAT 7052 .......... .......... .......... .......... .......... .......... 549 TCACATCTAA GCATCATTAT GTCTAAAGCT GTATTTTGAT GTTTCACCCA AAGGAGGACA 6992 .......... .......... .......... .......... .......... .......... 549 TCAAACATAC ATTTAAGAAT TTGTAAACCA TTTCTGAATT TGATAATAAG TTTAAAATTC 6932 .......... .......... .......... .......... .......... .......... 549 ACAACTCAAA GTATTAACAA ATGAGCATAT TATATTCATA TCATTTGCTC TACATTTGTA 6872 .......... .......... .......... .......... .......... .......... 549 CTCTGCCTCT GTTACAACCT TTAAAGGTCT TAACTTCTCA GATTGGTACG AACAGATCAA 6812 .......... .......... .......... .......... .......... .......... 549 ATTCCATCTC GGAGTTTTAG ATCTTGATGT TGCACTTTGC ACTGAGAATC CAACTGCTAT 6752 .......... .......... .......... .......... .......... .......... 549 TACTAAAATT AACAGTACTG AAGAAAGGTC TCATTATAAG CACTGAGATC GATCTAACAG 6692 .......... .......... .......... .......... .......... .......... 549 ATTAGGTGTC ACGACCCAAA TCGGGTCGTG ACTGGCACTC ACACTTACCC TCCTATGTGA 6632 .......... .......... .......... .......... .......... .......... 549 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATATAATA TCAACAGAAA GTAATGCGGA 6572 .......... .......... .......... .......... .......... .......... 549 AGACTTAAAC TCATTAATAA AAACCAATTC AATAGCTTCT AAAAGCTCAA CAACTATTAT 6512 .......... .......... .......... .......... .......... .......... 549 TATCCCCAAA ATCTGGAAGT CATCATCACA AGAACATCTA TCCTCAAATT ACTAATCTAA 6452 .......... .......... .......... .......... .......... .......... 549 GAGTATCTAA GAAGCTAAAA TACATAAAAA GCTAGTCTAT GCCGGAACTT CAAGGCATCA 6392 .......... .......... .......... .......... .......... .......... 549 AGACATGAAG AGGAAGATCC AGTCCAAGCT AGAAGCATTA GCTCACCCTG AAATCCGGAG 6332 |||| | |||||||| .......... .......... .......... .......... ......CCTG ATATCCGGAG 563 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GC 6280 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| || TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGTACGTTT GC 615 hqPGS_C04HBa0119A16.1-_SGN-E550077- (6345 6280) ******************************************************************************** EST sequence 7 -strand 714 n (File: SGN-E389972-) 1 AGTTTTTTTT TTTTTTTTTT TAAGAGGGAT AAAAGGGGTG ACCGAGGCCA ACATAGGCCA 61 CCTACGTATC TCATTCTTGA GAATTCAGGT TAGACGTAGT TCATTACAAA TGGATAAATT 121 CTAAGCTTAA CTATTACAAA TGAATAAAAG AGATTACAAG GAAATGATAG AAATCAAGCT 181 TTCCAACATG ATGTCTTTCG ACAACATTTG AGTAAATTGA TGACTTGTGA GACCTAATGT 241 TCATGCTCAA CCTTATAATA TCATCAAATA AATGTATTGA TGTGATTGCT AAGCGAACCG 301 ATGAGATCTC TCTCGTGTGC TATTGTCAGA TAGGCACCAA TTTAATTTCT TTGATGCATT 361 CATCATTTTC TTGATTCATT ATTCCAATCT CTTCTGAATT CGACTCTTTG TGACTTTTGA 421 ACTGTCTGAA TTCATCAACC ACTGTTTGGG TACAATGATC TTCTTACTGT AGTCCTCAAA 481 CTCGTCTGCA TCTACCCCAT TTCGTTCATT CAACTTGTGA TATGACATGA TATTGATAGA 541 TTTAAAAATA TTTTCACCTG ATATCCGGAG TAATGAAGAC TGGCTAGAGT TGCGGTTGAG 601 TTGAAGACGA CGGTACGTTT GCCATTTTAA ATGATGTTTG GCCGAAGTCT AATCTTTCCG 661 GTGAAATCTC ACTTCAATGG AGTATTAGGA CTGGATGTGG TCATTTTTAT TCTT Predicted gene structure (within gDNA segment 11681 to 4679): Exon 1 10591 10575 ( 17 n); cDNA 540 556 ( 17 n); score: 0.706 Intron 1 10574 6346 (4229 n); Pd: 0.850 (s: 0), Pa: 0.000 (s: 0.98) Exon 2 6345 6280 ( 66 n); cDNA 557 622 ( 66 n); score: 0.970 PPA cDNA 21 2 MATCH C04HBa0119A16.1- SGN-E389972- 0.970 83 0.116 C PGS_C04HBa0119A16.1-_SGN-E389972- (10591 10575,6345 6280) Alignment (genomic DNA sequence = upper lines): ATAGAGAACT ACTTTCAGTA AACAGTTGAT TATTGGGTTT GAATTCTCGT TGCTTTTCCT 10532 || | || | | ||||| ATTTAAAAAT ATTTTCA... .......... .......... .......... .......... 556 CTTGTACTAG TAAAGCAAAA GCTTGTGCCA AAGATGGTAA GGGATTCATC ATCAAAATAC 10472 .......... .......... .......... .......... .......... .......... 556 TTCCCCTAAT AATAGTATAT ACCACATTTA AGCCCATCAA AAACTGAATC AAACGCCTAT 10412 .......... .......... .......... .......... .......... .......... 556 CTTTCTCCGC CTTCTGAACA TTAGTTTTAG CTCCACACAC ACACACAATT ACACTAACTT 10352 .......... .......... .......... .......... .......... .......... 556 AAAACACATA TACTGTTGAA TTCCTCCCAA AGTTTCTTCA TAGGAGTGTA ATATATTGTG 10292 .......... .......... .......... .......... .......... .......... 556 ATATCGAGAA TACCTTGATT AAGATCATTT ATTTCCTTCT GAGTTTGGTA AAATTTTGCT 10232 .......... .......... .......... .......... .......... .......... 556 CCATTTGTCT GATCATATCG ATCCTCCAGT TCTGTCCACA ATTCCAGAGC ATCATTGACA 10172 .......... .......... .......... .......... .......... .......... 556 TATTCAACAC TATCAACAAT ATCTCGATAC AGAGAGTTGA GAATCCAGGA AGTAACCATA 10112 .......... .......... .......... .......... .......... .......... 556 TCATCACACC TCACCCATTG ATGATAAGTG GAATGATTCA CCTCTGGTCT CTTACACTCA 10052 .......... .......... .......... .......... .......... .......... 556 CCATTGATGA ACACTAGTTT GTTCTTCACT GACAAAGAAT GAAGTACACT ACGACGCCAT 9992 .......... .......... .......... .......... .......... .......... 556 GAATGAAAAC CAGTACTATT AAAAGGAACT GGTACAAGTA CTGCTCCAAG ATTATCTGAG 9932 .......... .......... .......... .......... .......... .......... 556 GATGACTGTA GAAATGACTC CCTGTATCAG TCCCAGATGA AGGAATACTG GCTGAACCAG 9872 .......... .......... .......... .......... .......... .......... 556 TGCTCGTAGA AGTAGGATCT ACCATTTTTA TCACAAAGAA AATTCGAAGG TTTACAGAGA 9812 .......... .......... .......... .......... .......... .......... 556 ATGAAATATG AAGATCTGAT GCGAAAATTG AAAAAGAAAG AAGCAGGAAA GATCAGAAAC 9752 .......... .......... .......... .......... .......... .......... 556 GTCCTCACTC TGATACCATG TTAATGTTGA AGATGATTGA AAACCTCCAT TGATGAGAAT 9692 .......... .......... .......... .......... .......... .......... 556 ATGAAAGCTT GATCAGAGAA GAGCATTGAA AATGTGTGCT ATTTTCATTG AGAACAGAAA 9632 .......... .......... .......... .......... .......... .......... 556 CATGAATGTG CAGTATTTAT ATAACAACTA AAGCAGAAAA TATCTAACTA ACTTTCTGAA 9572 .......... .......... .......... .......... .......... .......... 556 AATGAAAACT AACTAACTAA CTGATTTTTG ACAGCTAACT AACTATTCTA ACAACCTGAT 9512 .......... .......... .......... .......... .......... .......... 556 TAATTAAGCA TAATTACAAA TTTAATCTCA ATAAACATTC TTAACTTTAC ACTTTAATTA 9452 .......... .......... .......... .......... .......... .......... 556 CTTTGTTGCG ACATTTCGAT TAAAGCTTGT TGTGTGAAGT ACCACAACTA AAAAAATAGT 9392 .......... .......... .......... .......... .......... .......... 556 ATGCAGATTA TGCAATGTCG CATGATTAAC AAATAAGAAA ATCTATAAGC CGTAGTTTTG 9332 .......... .......... .......... .......... .......... .......... 556 TAATTTGATA CAAATAAATA ATTTTTTTCT TGAAGTTCTT GTGATTTAGC ATGACTATGA 9272 .......... .......... .......... .......... .......... .......... 556 AGAAATTATT TTTTTAAAAT ATATCAAATG AGTCGTGTAT TCGATCACGA CAAACAATTA 9212 .......... .......... .......... .......... .......... .......... 556 TGTAAATGGA GAAACGAATG TTTGCATTAG CCACTGATGG TAATTTGAAG AGAATGAAAA 9152 .......... .......... .......... .......... .......... .......... 556 TTATCAACCT CTAAATGTTG GTGTTGTGAA ACACAACAAA TGAAACAATG TTTCACCTAT 9092 .......... .......... .......... .......... .......... .......... 556 ATCTAGCAGC TTCTATAGCC CAAAATCTAT GGAGGTATTT TCCTTCATGT GCAAGTGTAG 9032 .......... .......... .......... .......... .......... .......... 556 ATATAGAAGG TAGAAACCTA TTGCAGACCA TAAATTATTG GTGGTATATG TTGAAGCCCC 8972 .......... .......... .......... .......... .......... .......... 556 TAACAAGTTT AGGATTTTCC TTAGAGCTAT ACCAACATTG ATAATGTGGA GCTTATGGAA 8912 .......... .......... .......... .......... .......... .......... 556 GAGGCGAAAT CATATTATGC ATGGAGGACA ACTTAACTTC GAAGGACTGA TACAACAAGT 8852 .......... .......... .......... .......... .......... .......... 556 AACAAAAAAA CATCTAGTGG CTGAAAACGA TAAGAACTTA AGTTTTAACC TAATTGGAAA 8792 .......... .......... .......... .......... .......... .......... 556 GACATGGTCT GAGGTGGTTA ATATATTAGG ATTCTACAAG TCTAAAATAT ACTATCACAA 8732 .......... .......... .......... .......... .......... .......... 556 TGTTGAGAGG AAGGCACCAA ATATTGATCA AGTGAAATGC AAAAAAGCAG GAGTTCTGTT 8672 .......... .......... .......... .......... .......... .......... 556 TCAGCGACAT GATGAAGATA TTAGGTCTGC TCAAGCTAAA GAAATAGGAC TTGACACAAA 8612 .......... .......... .......... .......... .......... .......... 556 CATAGAAGCA GAGCCCACAA CAATTCAAGA AGCTTTGGAA ATCGAAGAGA TTTCAAAATC 8552 .......... .......... .......... .......... .......... .......... 556 TCTTATTTGA AAAGAACATC ATACAAATGA CATAGAGGAT ATCATGAAAA ATTGCAAAAA 8492 .......... .......... .......... .......... .......... .......... 556 TAATTGAGGA CATAATGAAA TAAATGCAGA CACAGAAGGA TAAAATCAAA CATATTTTCA 8432 .......... .......... .......... .......... .......... .......... 556 GAAGACAATT CAATAGAAGA TTATTTAGCT AACCTAGCTA TTAAAAAAAC AGATATACAA 8372 .......... .......... .......... .......... .......... .......... 556 GAATTCAATG AATTTGCATA ATTACCAATA ACAGACAAAC ACATTATAAA TATGGAAAAA 8312 .......... .......... .......... .......... .......... .......... 556 ACACAGATTC CAACCATATA GAATAAGAAC ATGGAAAATT AGACCGAATA AAAATACAAA 8252 .......... .......... .......... .......... .......... .......... 556 TCCAGACATA TAGACAAACA AGGAAGGGGA ACAACAAAGC AACTTACATA AAAGTAAGCC 8192 .......... .......... .......... .......... .......... .......... 556 CGCAGAAAGG GATCATTAAA ATTGACAAAA TAAAGTTTTT CTTAATCTAT GTTAGTACAC 8132 .......... .......... .......... .......... .......... .......... 556 AAAAACTTTC AAAAAAAAAG GAGTACTCTT CATCTATAAC ATTCAAGCAT CGATTGTTAG 8072 .......... .......... .......... .......... .......... .......... 556 TTTTATGGCC CACGTGTGTT AATTTTTATG GTCCACGTTA ATATTGTTTA GTTTAATATT 8012 .......... .......... .......... .......... .......... .......... 556 TAATTACTAA TTAAATTCAA ATTCTAATTA GATAATTGGA GAAGTTACTG ACATGTGTGG 7952 .......... .......... .......... .......... .......... .......... 556 AGAACTGGGG AAGTAAGTTT GTAACTTCCA ACCACCCATT AAGTCTTTCA CTTTACCCAT 7892 .......... .......... .......... .......... .......... .......... 556 TATCTCTTCT AATTACCCAT TAAGTAGGGA GTTACTTGGT AGTTTTAAAA CTATCCATTA 7832 .......... .......... .......... .......... .......... .......... 556 TCTCCACTGC TCACCATGAT GGAAAGGTGT GAATGATGTT AAACACAATC TTATCTTAAA 7772 .......... .......... .......... .......... .......... .......... 556 GGGTCCTCTG TCTTCCATAA AGTTATGGTC TTATCCATCA AAACTATTCA TAAAGTATAA 7712 .......... .......... .......... .......... .......... .......... 556 CGCAAGAGAG ATAAACAACT TTTGAAGAAT GAAAACAAAA AGGCTTCCGC TCAATTAAAG 7652 .......... .......... .......... .......... .......... .......... 556 TTAAGATTCT TAAAAAATAA CTAGGTTGAC TCGGGTATGT ATTCTTGACT GAATTATTAT 7592 .......... .......... .......... .......... .......... .......... 556 AGTAATAAAT TTGTGTAAAA ATCATATAGT TCTAAGATCA TGAATAATTT ATAGGATTCA 7532 .......... .......... .......... .......... .......... .......... 556 TGAATGCATA GATTGTTTAT GTTTTCACAA TCATTAAAAT CCTAACATGT GGTATCAGAG 7472 .......... .......... .......... .......... .......... .......... 556 CCTGATTTAA GAACTAGTGA CTTTTCATAA AATTAATGTT TTCCTTATTT GAAAATGGTA 7412 .......... .......... .......... .......... .......... .......... 556 ATAGGTAGTA TTAAGTGAAA TAATTATTCA CTATCATGAT GTATTTTATT TTGAAATTAC 7352 .......... .......... .......... .......... .......... .......... 556 GTATATGAAA TCAGTTAATC AGCAAAATGG TCTAATCTTT GAAGAATTAA TTCAAAATAA 7292 .......... .......... .......... .......... .......... .......... 556 TAATGACTAA ACATATATTT AATTATCCAT TTTTTTATGC TTATAACTTA TACAACACTT 7232 .......... .......... .......... .......... .......... .......... 556 ACGGATATAT TGAAGTTTTT GGTTCTAACA TATTTATGGA TTACCCAAAG ATTGATTATT 7172 .......... .......... .......... .......... .......... .......... 556 TCATCTTATA ACCATTGAAC ATTAAAGAGA TAATTTGGAT GTGTCGTTAG TTTTATTTAT 7112 .......... .......... .......... .......... .......... .......... 556 TTAGTCAAAG ATGATATATT TTATTGATTG ACACATTAAA ATTATTGAAT TAAGTTAAAT 7052 .......... .......... .......... .......... .......... .......... 556 TCACATCTAA GCATCATTAT GTCTAAAGCT GTATTTTGAT GTTTCACCCA AAGGAGGACA 6992 .......... .......... .......... .......... .......... .......... 556 TCAAACATAC ATTTAAGAAT TTGTAAACCA TTTCTGAATT TGATAATAAG TTTAAAATTC 6932 .......... .......... .......... .......... .......... .......... 556 ACAACTCAAA GTATTAACAA ATGAGCATAT TATATTCATA TCATTTGCTC TACATTTGTA 6872 .......... .......... .......... .......... .......... .......... 556 CTCTGCCTCT GTTACAACCT TTAAAGGTCT TAACTTCTCA GATTGGTACG AACAGATCAA 6812 .......... .......... .......... .......... .......... .......... 556 ATTCCATCTC GGAGTTTTAG ATCTTGATGT TGCACTTTGC ACTGAGAATC CAACTGCTAT 6752 .......... .......... .......... .......... .......... .......... 556 TACTAAAATT AACAGTACTG AAGAAAGGTC TCATTATAAG CACTGAGATC GATCTAACAG 6692 .......... .......... .......... .......... .......... .......... 556 ATTAGGTGTC ACGACCCAAA TCGGGTCGTG ACTGGCACTC ACACTTACCC TCCTATGTGA 6632 .......... .......... .......... .......... .......... .......... 556 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATATAATA TCAACAGAAA GTAATGCGGA 6572 .......... .......... .......... .......... .......... .......... 556 AGACTTAAAC TCATTAATAA AAACCAATTC AATAGCTTCT AAAAGCTCAA CAACTATTAT 6512 .......... .......... .......... .......... .......... .......... 556 TATCCCCAAA ATCTGGAAGT CATCATCACA AGAACATCTA TCCTCAAATT ACTAATCTAA 6452 .......... .......... .......... .......... .......... .......... 556 GAGTATCTAA GAAGCTAAAA TACATAAAAA GCTAGTCTAT GCCGGAACTT CAAGGCATCA 6392 .......... .......... .......... .......... .......... .......... 556 AGACATGAAG AGGAAGATCC AGTCCAAGCT AGAAGCATTA GCTCACCCTG AAATCCGGAG 6332 |||| | |||||||| .......... .......... .......... .......... ......CCTG ATATCCGGAG 570 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GC 6280 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| || TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGTACGTTT GC 622 hqPGS_C04HBa0119A16.1-_SGN-E389972- (6345 6280) ******************************************************************************** EST sequence 9 -strand 548 n (File: SGN-E228417-) 1 GATAGAAATC AAGCTTTCCA ACATGATGTC TTTCGACAAC ATTTGAGTAA ATTGATGACT 61 TGTGAGACCT AATGTTCATG CTCAACCTTA TAATATCATC AAATAAATGT ATTGATGTGA 121 TTGCTAAGCG AACCGATGAG ATCTCTCTCG TGTGCTATTG TCAGATAGGC ACCAATTTAA 181 TTTCTTTGAT GCATTCATCA TTTTCTTGAT TCATTATTCC AATCTCTTCT GAATTCGACT 241 CTTTGTGACT TTTGAACTGT CTGAATTCAT CAACCACTGT TTGGGTACAA TGATCTTCTT 301 ACTGTAGTCC TCAAACTCGT CTGCATCTAC CCCATTTCGT TCATTCAACT TGTGATATGA 361 CATGATATTG ATAGATTTAA AAATATTTTC ACCTGATATC CGGAGTAATG AAGACTGGCT 421 AGAGTTGCGG TTGAGTTGAA GACGACGGTA CGTTTGCCAT TTTAAATGAT GTTTGGCCGA 481 AGTCTAATCT TTCCGGTGAA ATCTCACTTC AATGGAGTAT TAGGACTGGA TGTGGTCATT 541 TTTATTCT Predicted gene structure (within gDNA segment 11519 to 4689): Exon 1 10591 10575 ( 17 n); cDNA 375 391 ( 17 n); score: 0.706 Intron 1 10574 6346 (4229 n); Pd: 0.850 (s: 0), Pa: 0.000 (s: 0.98) Exon 2 6345 6280 ( 66 n); cDNA 392 457 ( 66 n); score: 0.970 MATCH C04HBa0119A16.1- SGN-E228417- 0.970 83 0.151 C PGS_C04HBa0119A16.1-_SGN-E228417- (10591 10575,6345 6280) Alignment (genomic DNA sequence = upper lines): ATAGAGAACT ACTTTCAGTA AACAGTTGAT TATTGGGTTT GAATTCTCGT TGCTTTTCCT 10532 || | || | | ||||| ATTTAAAAAT ATTTTCA... .......... .......... .......... .......... 391 CTTGTACTAG TAAAGCAAAA GCTTGTGCCA AAGATGGTAA GGGATTCATC ATCAAAATAC 10472 .......... .......... .......... .......... .......... .......... 391 TTCCCCTAAT AATAGTATAT ACCACATTTA AGCCCATCAA AAACTGAATC AAACGCCTAT 10412 .......... .......... .......... .......... .......... .......... 391 CTTTCTCCGC CTTCTGAACA TTAGTTTTAG CTCCACACAC ACACACAATT ACACTAACTT 10352 .......... .......... .......... .......... .......... .......... 391 AAAACACATA TACTGTTGAA TTCCTCCCAA AGTTTCTTCA TAGGAGTGTA ATATATTGTG 10292 .......... .......... .......... .......... .......... .......... 391 ATATCGAGAA TACCTTGATT AAGATCATTT ATTTCCTTCT GAGTTTGGTA AAATTTTGCT 10232 .......... .......... .......... .......... .......... .......... 391 CCATTTGTCT GATCATATCG ATCCTCCAGT TCTGTCCACA ATTCCAGAGC ATCATTGACA 10172 .......... .......... .......... .......... .......... .......... 391 TATTCAACAC TATCAACAAT ATCTCGATAC AGAGAGTTGA GAATCCAGGA AGTAACCATA 10112 .......... .......... .......... .......... .......... .......... 391 TCATCACACC TCACCCATTG ATGATAAGTG GAATGATTCA CCTCTGGTCT CTTACACTCA 10052 .......... .......... .......... .......... .......... .......... 391 CCATTGATGA ACACTAGTTT GTTCTTCACT GACAAAGAAT GAAGTACACT ACGACGCCAT 9992 .......... .......... .......... .......... .......... .......... 391 GAATGAAAAC CAGTACTATT AAAAGGAACT GGTACAAGTA CTGCTCCAAG ATTATCTGAG 9932 .......... .......... .......... .......... .......... .......... 391 GATGACTGTA GAAATGACTC CCTGTATCAG TCCCAGATGA AGGAATACTG GCTGAACCAG 9872 .......... .......... .......... .......... .......... .......... 391 TGCTCGTAGA AGTAGGATCT ACCATTTTTA TCACAAAGAA AATTCGAAGG TTTACAGAGA 9812 .......... .......... .......... .......... .......... .......... 391 ATGAAATATG AAGATCTGAT GCGAAAATTG AAAAAGAAAG AAGCAGGAAA GATCAGAAAC 9752 .......... .......... .......... .......... .......... .......... 391 GTCCTCACTC TGATACCATG TTAATGTTGA AGATGATTGA AAACCTCCAT TGATGAGAAT 9692 .......... .......... .......... .......... .......... .......... 391 ATGAAAGCTT GATCAGAGAA GAGCATTGAA AATGTGTGCT ATTTTCATTG AGAACAGAAA 9632 .......... .......... .......... .......... .......... .......... 391 CATGAATGTG CAGTATTTAT ATAACAACTA AAGCAGAAAA TATCTAACTA ACTTTCTGAA 9572 .......... .......... .......... .......... .......... .......... 391 AATGAAAACT AACTAACTAA CTGATTTTTG ACAGCTAACT AACTATTCTA ACAACCTGAT 9512 .......... .......... .......... .......... .......... .......... 391 TAATTAAGCA TAATTACAAA TTTAATCTCA ATAAACATTC TTAACTTTAC ACTTTAATTA 9452 .......... .......... .......... .......... .......... .......... 391 CTTTGTTGCG ACATTTCGAT TAAAGCTTGT TGTGTGAAGT ACCACAACTA AAAAAATAGT 9392 .......... .......... .......... .......... .......... .......... 391 ATGCAGATTA TGCAATGTCG CATGATTAAC AAATAAGAAA ATCTATAAGC CGTAGTTTTG 9332 .......... .......... .......... .......... .......... .......... 391 TAATTTGATA CAAATAAATA ATTTTTTTCT TGAAGTTCTT GTGATTTAGC ATGACTATGA 9272 .......... .......... .......... .......... .......... .......... 391 AGAAATTATT TTTTTAAAAT ATATCAAATG AGTCGTGTAT TCGATCACGA CAAACAATTA 9212 .......... .......... .......... .......... .......... .......... 391 TGTAAATGGA GAAACGAATG TTTGCATTAG CCACTGATGG TAATTTGAAG AGAATGAAAA 9152 .......... .......... .......... .......... .......... .......... 391 TTATCAACCT CTAAATGTTG GTGTTGTGAA ACACAACAAA TGAAACAATG TTTCACCTAT 9092 .......... .......... .......... .......... .......... .......... 391 ATCTAGCAGC TTCTATAGCC CAAAATCTAT GGAGGTATTT TCCTTCATGT GCAAGTGTAG 9032 .......... .......... .......... .......... .......... .......... 391 ATATAGAAGG TAGAAACCTA TTGCAGACCA TAAATTATTG GTGGTATATG TTGAAGCCCC 8972 .......... .......... .......... .......... .......... .......... 391 TAACAAGTTT AGGATTTTCC TTAGAGCTAT ACCAACATTG ATAATGTGGA GCTTATGGAA 8912 .......... .......... .......... .......... .......... .......... 391 GAGGCGAAAT CATATTATGC ATGGAGGACA ACTTAACTTC GAAGGACTGA TACAACAAGT 8852 .......... .......... .......... .......... .......... .......... 391 AACAAAAAAA CATCTAGTGG CTGAAAACGA TAAGAACTTA AGTTTTAACC TAATTGGAAA 8792 .......... .......... .......... .......... .......... .......... 391 GACATGGTCT GAGGTGGTTA ATATATTAGG ATTCTACAAG TCTAAAATAT ACTATCACAA 8732 .......... .......... .......... .......... .......... .......... 391 TGTTGAGAGG AAGGCACCAA ATATTGATCA AGTGAAATGC AAAAAAGCAG GAGTTCTGTT 8672 .......... .......... .......... .......... .......... .......... 391 TCAGCGACAT GATGAAGATA TTAGGTCTGC TCAAGCTAAA GAAATAGGAC TTGACACAAA 8612 .......... .......... .......... .......... .......... .......... 391 CATAGAAGCA GAGCCCACAA CAATTCAAGA AGCTTTGGAA ATCGAAGAGA TTTCAAAATC 8552 .......... .......... .......... .......... .......... .......... 391 TCTTATTTGA AAAGAACATC ATACAAATGA CATAGAGGAT ATCATGAAAA ATTGCAAAAA 8492 .......... .......... .......... .......... .......... .......... 391 TAATTGAGGA CATAATGAAA TAAATGCAGA CACAGAAGGA TAAAATCAAA CATATTTTCA 8432 .......... .......... .......... .......... .......... .......... 391 GAAGACAATT CAATAGAAGA TTATTTAGCT AACCTAGCTA TTAAAAAAAC AGATATACAA 8372 .......... .......... .......... .......... .......... .......... 391 GAATTCAATG AATTTGCATA ATTACCAATA ACAGACAAAC ACATTATAAA TATGGAAAAA 8312 .......... .......... .......... .......... .......... .......... 391 ACACAGATTC CAACCATATA GAATAAGAAC ATGGAAAATT AGACCGAATA AAAATACAAA 8252 .......... .......... .......... .......... .......... .......... 391 TCCAGACATA TAGACAAACA AGGAAGGGGA ACAACAAAGC AACTTACATA AAAGTAAGCC 8192 .......... .......... .......... .......... .......... .......... 391 CGCAGAAAGG GATCATTAAA ATTGACAAAA TAAAGTTTTT CTTAATCTAT GTTAGTACAC 8132 .......... .......... .......... .......... .......... .......... 391 AAAAACTTTC AAAAAAAAAG GAGTACTCTT CATCTATAAC ATTCAAGCAT CGATTGTTAG 8072 .......... .......... .......... .......... .......... .......... 391 TTTTATGGCC CACGTGTGTT AATTTTTATG GTCCACGTTA ATATTGTTTA GTTTAATATT 8012 .......... .......... .......... .......... .......... .......... 391 TAATTACTAA TTAAATTCAA ATTCTAATTA GATAATTGGA GAAGTTACTG ACATGTGTGG 7952 .......... .......... .......... .......... .......... .......... 391 AGAACTGGGG AAGTAAGTTT GTAACTTCCA ACCACCCATT AAGTCTTTCA CTTTACCCAT 7892 .......... .......... .......... .......... .......... .......... 391 TATCTCTTCT AATTACCCAT TAAGTAGGGA GTTACTTGGT AGTTTTAAAA CTATCCATTA 7832 .......... .......... .......... .......... .......... .......... 391 TCTCCACTGC TCACCATGAT GGAAAGGTGT GAATGATGTT AAACACAATC TTATCTTAAA 7772 .......... .......... .......... .......... .......... .......... 391 GGGTCCTCTG TCTTCCATAA AGTTATGGTC TTATCCATCA AAACTATTCA TAAAGTATAA 7712 .......... .......... .......... .......... .......... .......... 391 CGCAAGAGAG ATAAACAACT TTTGAAGAAT GAAAACAAAA AGGCTTCCGC TCAATTAAAG 7652 .......... .......... .......... .......... .......... .......... 391 TTAAGATTCT TAAAAAATAA CTAGGTTGAC TCGGGTATGT ATTCTTGACT GAATTATTAT 7592 .......... .......... .......... .......... .......... .......... 391 AGTAATAAAT TTGTGTAAAA ATCATATAGT TCTAAGATCA TGAATAATTT ATAGGATTCA 7532 .......... .......... .......... .......... .......... .......... 391 TGAATGCATA GATTGTTTAT GTTTTCACAA TCATTAAAAT CCTAACATGT GGTATCAGAG 7472 .......... .......... .......... .......... .......... .......... 391 CCTGATTTAA GAACTAGTGA CTTTTCATAA AATTAATGTT TTCCTTATTT GAAAATGGTA 7412 .......... .......... .......... .......... .......... .......... 391 ATAGGTAGTA TTAAGTGAAA TAATTATTCA CTATCATGAT GTATTTTATT TTGAAATTAC 7352 .......... .......... .......... .......... .......... .......... 391 GTATATGAAA TCAGTTAATC AGCAAAATGG TCTAATCTTT GAAGAATTAA TTCAAAATAA 7292 .......... .......... .......... .......... .......... .......... 391 TAATGACTAA ACATATATTT AATTATCCAT TTTTTTATGC TTATAACTTA TACAACACTT 7232 .......... .......... .......... .......... .......... .......... 391 ACGGATATAT TGAAGTTTTT GGTTCTAACA TATTTATGGA TTACCCAAAG ATTGATTATT 7172 .......... .......... .......... .......... .......... .......... 391 TCATCTTATA ACCATTGAAC ATTAAAGAGA TAATTTGGAT GTGTCGTTAG TTTTATTTAT 7112 .......... .......... .......... .......... .......... .......... 391 TTAGTCAAAG ATGATATATT TTATTGATTG ACACATTAAA ATTATTGAAT TAAGTTAAAT 7052 .......... .......... .......... .......... .......... .......... 391 TCACATCTAA GCATCATTAT GTCTAAAGCT GTATTTTGAT GTTTCACCCA AAGGAGGACA 6992 .......... .......... .......... .......... .......... .......... 391 TCAAACATAC ATTTAAGAAT TTGTAAACCA TTTCTGAATT TGATAATAAG TTTAAAATTC 6932 .......... .......... .......... .......... .......... .......... 391 ACAACTCAAA GTATTAACAA ATGAGCATAT TATATTCATA TCATTTGCTC TACATTTGTA 6872 .......... .......... .......... .......... .......... .......... 391 CTCTGCCTCT GTTACAACCT TTAAAGGTCT TAACTTCTCA GATTGGTACG AACAGATCAA 6812 .......... .......... .......... .......... .......... .......... 391 ATTCCATCTC GGAGTTTTAG ATCTTGATGT TGCACTTTGC ACTGAGAATC CAACTGCTAT 6752 .......... .......... .......... .......... .......... .......... 391 TACTAAAATT AACAGTACTG AAGAAAGGTC TCATTATAAG CACTGAGATC GATCTAACAG 6692 .......... .......... .......... .......... .......... .......... 391 ATTAGGTGTC ACGACCCAAA TCGGGTCGTG ACTGGCACTC ACACTTACCC TCCTATGTGA 6632 .......... .......... .......... .......... .......... .......... 391 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATATAATA TCAACAGAAA GTAATGCGGA 6572 .......... .......... .......... .......... .......... .......... 391 AGACTTAAAC TCATTAATAA AAACCAATTC AATAGCTTCT AAAAGCTCAA CAACTATTAT 6512 .......... .......... .......... .......... .......... .......... 391 TATCCCCAAA ATCTGGAAGT CATCATCACA AGAACATCTA TCCTCAAATT ACTAATCTAA 6452 .......... .......... .......... .......... .......... .......... 391 GAGTATCTAA GAAGCTAAAA TACATAAAAA GCTAGTCTAT GCCGGAACTT CAAGGCATCA 6392 .......... .......... .......... .......... .......... .......... 391 AGACATGAAG AGGAAGATCC AGTCCAAGCT AGAAGCATTA GCTCACCCTG AAATCCGGAG 6332 |||| | |||||||| .......... .......... .......... .......... ......CCTG ATATCCGGAG 405 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GC 6280 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| || TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGTACGTTT GC 457 hqPGS_C04HBa0119A16.1-_SGN-E228417- (6345 6280) ******************************************************************************** EST sequence 39 +strand 672 n (File: SGN-E550078+) 1 CCGAGGCCAC ATAGGCCACC TATCTATCTC ATTCTTGAGA ATTCAGGTTA TACGTAGTTC 61 ATTACAAATG GATAAATTCT AAGCTTAACT ATTACAAATG AATAAAAGAG ACTACAAGGA 121 AATGATAGAA ATCAAGCTTT CCAACATGAT GTCTTTCGAC AACATTTGAG TAAATTGATG 181 ACTTGTGAGA CCTAATGTTC ATGCTCAACC TTATAATATC ATCAAATAAA TGTATTGATG 241 TGATTGCTAA GCGAACCGAT GAGATCTCTC TCGTGTGCTA TTGTCAGATA GGCACCAATT 301 TAATTTCTTT GATGCATTCA TCATTTTCTT GATTCATTAT TCCAATCTCT TCTGAATTCG 361 ACTCTTTGTG ACTTTTGAAC TGTCTGAATT CATCAACCAC TGTTTGGGTA CAATGATCTT 421 CTTACTGTAG TCCTCAAACT CGTCTGCATC TACCCCATTT CGTTCATTCA ACTTGTGATA 481 TGACATGATA TTGATAGATT TAAAAATATT TTCACCTGAT ATCCGGAGTA ATGAAGACTG 541 GCTAGAGTTG CGGTTGAGTT GAAGACGACG GTACGTTTGC CATTTTAAAT GATGTTTGGC 601 CGAAGTCTAA TCTTTCCGGT GAAATCTCAC TTCAATGGAG TATTAGGACT GGATGTGGTC 661 AATTTTATTC TT Predicted gene structure (within gDNA segment 11681 to 4669): Exon 1 10591 10575 ( 17 n); cDNA 498 514 ( 17 n); score: 0.706 Intron 1 10574 6346 (4229 n); Pd: 0.850 (s: 0), Pa: 0.000 (s: 0.98) Exon 2 6345 6280 ( 66 n); cDNA 515 580 ( 66 n); score: 0.970 MATCH C04HBa0119A16.1- SGN-E550078+ 0.970 83 0.124 C PGS_C04HBa0119A16.1-_SGN-E550078+ (10591 10575,6345 6280) Alignment (genomic DNA sequence = upper lines): ATAGAGAACT ACTTTCAGTA AACAGTTGAT TATTGGGTTT GAATTCTCGT TGCTTTTCCT 10532 || | || | | ||||| ATTTAAAAAT ATTTTCA... .......... .......... .......... .......... 514 CTTGTACTAG TAAAGCAAAA GCTTGTGCCA AAGATGGTAA GGGATTCATC ATCAAAATAC 10472 .......... .......... .......... .......... .......... .......... 514 TTCCCCTAAT AATAGTATAT ACCACATTTA AGCCCATCAA AAACTGAATC AAACGCCTAT 10412 .......... .......... .......... .......... .......... .......... 514 CTTTCTCCGC CTTCTGAACA TTAGTTTTAG CTCCACACAC ACACACAATT ACACTAACTT 10352 .......... .......... .......... .......... .......... .......... 514 AAAACACATA TACTGTTGAA TTCCTCCCAA AGTTTCTTCA TAGGAGTGTA ATATATTGTG 10292 .......... .......... .......... .......... .......... .......... 514 ATATCGAGAA TACCTTGATT AAGATCATTT ATTTCCTTCT GAGTTTGGTA AAATTTTGCT 10232 .......... .......... .......... .......... .......... .......... 514 CCATTTGTCT GATCATATCG ATCCTCCAGT TCTGTCCACA ATTCCAGAGC ATCATTGACA 10172 .......... .......... .......... .......... .......... .......... 514 TATTCAACAC TATCAACAAT ATCTCGATAC AGAGAGTTGA GAATCCAGGA AGTAACCATA 10112 .......... .......... .......... .......... .......... .......... 514 TCATCACACC TCACCCATTG ATGATAAGTG GAATGATTCA CCTCTGGTCT CTTACACTCA 10052 .......... .......... .......... .......... .......... .......... 514 CCATTGATGA ACACTAGTTT GTTCTTCACT GACAAAGAAT GAAGTACACT ACGACGCCAT 9992 .......... .......... .......... .......... .......... .......... 514 GAATGAAAAC CAGTACTATT AAAAGGAACT GGTACAAGTA CTGCTCCAAG ATTATCTGAG 9932 .......... .......... .......... .......... .......... .......... 514 GATGACTGTA GAAATGACTC CCTGTATCAG TCCCAGATGA AGGAATACTG GCTGAACCAG 9872 .......... .......... .......... .......... .......... .......... 514 TGCTCGTAGA AGTAGGATCT ACCATTTTTA TCACAAAGAA AATTCGAAGG TTTACAGAGA 9812 .......... .......... .......... .......... .......... .......... 514 ATGAAATATG AAGATCTGAT GCGAAAATTG AAAAAGAAAG AAGCAGGAAA GATCAGAAAC 9752 .......... .......... .......... .......... .......... .......... 514 GTCCTCACTC TGATACCATG TTAATGTTGA AGATGATTGA AAACCTCCAT TGATGAGAAT 9692 .......... .......... .......... .......... .......... .......... 514 ATGAAAGCTT GATCAGAGAA GAGCATTGAA AATGTGTGCT ATTTTCATTG AGAACAGAAA 9632 .......... .......... .......... .......... .......... .......... 514 CATGAATGTG CAGTATTTAT ATAACAACTA AAGCAGAAAA TATCTAACTA ACTTTCTGAA 9572 .......... .......... .......... .......... .......... .......... 514 AATGAAAACT AACTAACTAA CTGATTTTTG ACAGCTAACT AACTATTCTA ACAACCTGAT 9512 .......... .......... .......... .......... .......... .......... 514 TAATTAAGCA TAATTACAAA TTTAATCTCA ATAAACATTC TTAACTTTAC ACTTTAATTA 9452 .......... .......... .......... .......... .......... .......... 514 CTTTGTTGCG ACATTTCGAT TAAAGCTTGT TGTGTGAAGT ACCACAACTA AAAAAATAGT 9392 .......... .......... .......... .......... .......... .......... 514 ATGCAGATTA TGCAATGTCG CATGATTAAC AAATAAGAAA ATCTATAAGC CGTAGTTTTG 9332 .......... .......... .......... .......... .......... .......... 514 TAATTTGATA CAAATAAATA ATTTTTTTCT TGAAGTTCTT GTGATTTAGC ATGACTATGA 9272 .......... .......... .......... .......... .......... .......... 514 AGAAATTATT TTTTTAAAAT ATATCAAATG AGTCGTGTAT TCGATCACGA CAAACAATTA 9212 .......... .......... .......... .......... .......... .......... 514 TGTAAATGGA GAAACGAATG TTTGCATTAG CCACTGATGG TAATTTGAAG AGAATGAAAA 9152 .......... .......... .......... .......... .......... .......... 514 TTATCAACCT CTAAATGTTG GTGTTGTGAA ACACAACAAA TGAAACAATG TTTCACCTAT 9092 .......... .......... .......... .......... .......... .......... 514 ATCTAGCAGC TTCTATAGCC CAAAATCTAT GGAGGTATTT TCCTTCATGT GCAAGTGTAG 9032 .......... .......... .......... .......... .......... .......... 514 ATATAGAAGG TAGAAACCTA TTGCAGACCA TAAATTATTG GTGGTATATG TTGAAGCCCC 8972 .......... .......... .......... .......... .......... .......... 514 TAACAAGTTT AGGATTTTCC TTAGAGCTAT ACCAACATTG ATAATGTGGA GCTTATGGAA 8912 .......... .......... .......... .......... .......... .......... 514 GAGGCGAAAT CATATTATGC ATGGAGGACA ACTTAACTTC GAAGGACTGA TACAACAAGT 8852 .......... .......... .......... .......... .......... .......... 514 AACAAAAAAA CATCTAGTGG CTGAAAACGA TAAGAACTTA AGTTTTAACC TAATTGGAAA 8792 .......... .......... .......... .......... .......... .......... 514 GACATGGTCT GAGGTGGTTA ATATATTAGG ATTCTACAAG TCTAAAATAT ACTATCACAA 8732 .......... .......... .......... .......... .......... .......... 514 TGTTGAGAGG AAGGCACCAA ATATTGATCA AGTGAAATGC AAAAAAGCAG GAGTTCTGTT 8672 .......... .......... .......... .......... .......... .......... 514 TCAGCGACAT GATGAAGATA TTAGGTCTGC TCAAGCTAAA GAAATAGGAC TTGACACAAA 8612 .......... .......... .......... .......... .......... .......... 514 CATAGAAGCA GAGCCCACAA CAATTCAAGA AGCTTTGGAA ATCGAAGAGA TTTCAAAATC 8552 .......... .......... .......... .......... .......... .......... 514 TCTTATTTGA AAAGAACATC ATACAAATGA CATAGAGGAT ATCATGAAAA ATTGCAAAAA 8492 .......... .......... .......... .......... .......... .......... 514 TAATTGAGGA CATAATGAAA TAAATGCAGA CACAGAAGGA TAAAATCAAA CATATTTTCA 8432 .......... .......... .......... .......... .......... .......... 514 GAAGACAATT CAATAGAAGA TTATTTAGCT AACCTAGCTA TTAAAAAAAC AGATATACAA 8372 .......... .......... .......... .......... .......... .......... 514 GAATTCAATG AATTTGCATA ATTACCAATA ACAGACAAAC ACATTATAAA TATGGAAAAA 8312 .......... .......... .......... .......... .......... .......... 514 ACACAGATTC CAACCATATA GAATAAGAAC ATGGAAAATT AGACCGAATA AAAATACAAA 8252 .......... .......... .......... .......... .......... .......... 514 TCCAGACATA TAGACAAACA AGGAAGGGGA ACAACAAAGC AACTTACATA AAAGTAAGCC 8192 .......... .......... .......... .......... .......... .......... 514 CGCAGAAAGG GATCATTAAA ATTGACAAAA TAAAGTTTTT CTTAATCTAT GTTAGTACAC 8132 .......... .......... .......... .......... .......... .......... 514 AAAAACTTTC AAAAAAAAAG GAGTACTCTT CATCTATAAC ATTCAAGCAT CGATTGTTAG 8072 .......... .......... .......... .......... .......... .......... 514 TTTTATGGCC CACGTGTGTT AATTTTTATG GTCCACGTTA ATATTGTTTA GTTTAATATT 8012 .......... .......... .......... .......... .......... .......... 514 TAATTACTAA TTAAATTCAA ATTCTAATTA GATAATTGGA GAAGTTACTG ACATGTGTGG 7952 .......... .......... .......... .......... .......... .......... 514 AGAACTGGGG AAGTAAGTTT GTAACTTCCA ACCACCCATT AAGTCTTTCA CTTTACCCAT 7892 .......... .......... .......... .......... .......... .......... 514 TATCTCTTCT AATTACCCAT TAAGTAGGGA GTTACTTGGT AGTTTTAAAA CTATCCATTA 7832 .......... .......... .......... .......... .......... .......... 514 TCTCCACTGC TCACCATGAT GGAAAGGTGT GAATGATGTT AAACACAATC TTATCTTAAA 7772 .......... .......... .......... .......... .......... .......... 514 GGGTCCTCTG TCTTCCATAA AGTTATGGTC TTATCCATCA AAACTATTCA TAAAGTATAA 7712 .......... .......... .......... .......... .......... .......... 514 CGCAAGAGAG ATAAACAACT TTTGAAGAAT GAAAACAAAA AGGCTTCCGC TCAATTAAAG 7652 .......... .......... .......... .......... .......... .......... 514 TTAAGATTCT TAAAAAATAA CTAGGTTGAC TCGGGTATGT ATTCTTGACT GAATTATTAT 7592 .......... .......... .......... .......... .......... .......... 514 AGTAATAAAT TTGTGTAAAA ATCATATAGT TCTAAGATCA TGAATAATTT ATAGGATTCA 7532 .......... .......... .......... .......... .......... .......... 514 TGAATGCATA GATTGTTTAT GTTTTCACAA TCATTAAAAT CCTAACATGT GGTATCAGAG 7472 .......... .......... .......... .......... .......... .......... 514 CCTGATTTAA GAACTAGTGA CTTTTCATAA AATTAATGTT TTCCTTATTT GAAAATGGTA 7412 .......... .......... .......... .......... .......... .......... 514 ATAGGTAGTA TTAAGTGAAA TAATTATTCA CTATCATGAT GTATTTTATT TTGAAATTAC 7352 .......... .......... .......... .......... .......... .......... 514 GTATATGAAA TCAGTTAATC AGCAAAATGG TCTAATCTTT GAAGAATTAA TTCAAAATAA 7292 .......... .......... .......... .......... .......... .......... 514 TAATGACTAA ACATATATTT AATTATCCAT TTTTTTATGC TTATAACTTA TACAACACTT 7232 .......... .......... .......... .......... .......... .......... 514 ACGGATATAT TGAAGTTTTT GGTTCTAACA TATTTATGGA TTACCCAAAG ATTGATTATT 7172 .......... .......... .......... .......... .......... .......... 514 TCATCTTATA ACCATTGAAC ATTAAAGAGA TAATTTGGAT GTGTCGTTAG TTTTATTTAT 7112 .......... .......... .......... .......... .......... .......... 514 TTAGTCAAAG ATGATATATT TTATTGATTG ACACATTAAA ATTATTGAAT TAAGTTAAAT 7052 .......... .......... .......... .......... .......... .......... 514 TCACATCTAA GCATCATTAT GTCTAAAGCT GTATTTTGAT GTTTCACCCA AAGGAGGACA 6992 .......... .......... .......... .......... .......... .......... 514 TCAAACATAC ATTTAAGAAT TTGTAAACCA TTTCTGAATT TGATAATAAG TTTAAAATTC 6932 .......... .......... .......... .......... .......... .......... 514 ACAACTCAAA GTATTAACAA ATGAGCATAT TATATTCATA TCATTTGCTC TACATTTGTA 6872 .......... .......... .......... .......... .......... .......... 514 CTCTGCCTCT GTTACAACCT TTAAAGGTCT TAACTTCTCA GATTGGTACG AACAGATCAA 6812 .......... .......... .......... .......... .......... .......... 514 ATTCCATCTC GGAGTTTTAG ATCTTGATGT TGCACTTTGC ACTGAGAATC CAACTGCTAT 6752 .......... .......... .......... .......... .......... .......... 514 TACTAAAATT AACAGTACTG AAGAAAGGTC TCATTATAAG CACTGAGATC GATCTAACAG 6692 .......... .......... .......... .......... .......... .......... 514 ATTAGGTGTC ACGACCCAAA TCGGGTCGTG ACTGGCACTC ACACTTACCC TCCTATGTGA 6632 .......... .......... .......... .......... .......... .......... 514 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATATAATA TCAACAGAAA GTAATGCGGA 6572 .......... .......... .......... .......... .......... .......... 514 AGACTTAAAC TCATTAATAA AAACCAATTC AATAGCTTCT AAAAGCTCAA CAACTATTAT 6512 .......... .......... .......... .......... .......... .......... 514 TATCCCCAAA ATCTGGAAGT CATCATCACA AGAACATCTA TCCTCAAATT ACTAATCTAA 6452 .......... .......... .......... .......... .......... .......... 514 GAGTATCTAA GAAGCTAAAA TACATAAAAA GCTAGTCTAT GCCGGAACTT CAAGGCATCA 6392 .......... .......... .......... .......... .......... .......... 514 AGACATGAAG AGGAAGATCC AGTCCAAGCT AGAAGCATTA GCTCACCCTG AAATCCGGAG 6332 |||| | |||||||| .......... .......... .......... .......... ......CCTG ATATCCGGAG 528 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GC 6280 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| || TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGTACGTTT GC 580 hqPGS_C04HBa0119A16.1-_SGN-E550078+ (6345 6280) ******************************************************************************** EST sequence 51 +strand 679 n (File: SGN-E389445+) 1 AGGGGTGCCG AGGCCACATA GGCCACCTTT GTATCTCATT GATGAGAATT CAGGTTAGTC 61 GTAGTTCATT ACAAATGGAT AAATTCTAAG CTTAACTATT ACAAATGAAT AAAAGAGATT 121 ACAAGGAAAT GATAGAAATC AAGCTTTCCA ACATGATGTC TTTCGACAAC ATTTGAGTAA 181 ATTGATGACT TGTGAGACCT AATGTTCATG CTCAACCTTA TAATATCATC AAATAAATGT 241 ATTGATGTGA TTGCTAAGCG AACCGATGAG ATCTCTCTCG TGTGCTATTG TCAGATAGGC 301 ACCAATTTAA TTTCTTTGAT GCATTCATCA TTTTCTTGAT TCATTATTCC AATCTCTTCT 361 GAATTCGACT CTTTGTGACT TTTGAACTGT CTGAATTCAT CAACCACTGT TTGGGTACAA 421 TGATCTTCTT ACTGTAGTCC TCAAACTCGT CTGCATCTAC CCCATTTCGT TCATTCAACT 481 TGTGATATGA CATGATATTG ATAGATTTAA AAATATTTTC ACCTGATATC CGGAGTAATG 541 AAGACTGGCT AGAGTTGCGG TTGAGTTGAA GACGACGGTA CGTTTGCCAT TTTAAATGAT 601 GTTTGGCCGA AGTCTAATCT TTCCGGTGAA ATCTCACTTC AATGGAGTAT TAGGACTGGA 661 TGTGGTCATT TTTATTCTT Predicted gene structure (within gDNA segment 11681 to 4669): Exon 1 10591 10575 ( 17 n); cDNA 505 521 ( 17 n); score: 0.706 Intron 1 10574 6346 (4229 n); Pd: 0.850 (s: 0), Pa: 0.000 (s: 0.98) Exon 2 6345 6280 ( 66 n); cDNA 522 587 ( 66 n); score: 0.970 MATCH C04HBa0119A16.1- SGN-E389445+ 0.970 83 0.122 C PGS_C04HBa0119A16.1-_SGN-E389445+ (10591 10575,6345 6280) Alignment (genomic DNA sequence = upper lines): ATAGAGAACT ACTTTCAGTA AACAGTTGAT TATTGGGTTT GAATTCTCGT TGCTTTTCCT 10532 || | || | | ||||| ATTTAAAAAT ATTTTCA... .......... .......... .......... .......... 521 CTTGTACTAG TAAAGCAAAA GCTTGTGCCA AAGATGGTAA GGGATTCATC ATCAAAATAC 10472 .......... .......... .......... .......... .......... .......... 521 TTCCCCTAAT AATAGTATAT ACCACATTTA AGCCCATCAA AAACTGAATC AAACGCCTAT 10412 .......... .......... .......... .......... .......... .......... 521 CTTTCTCCGC CTTCTGAACA TTAGTTTTAG CTCCACACAC ACACACAATT ACACTAACTT 10352 .......... .......... .......... .......... .......... .......... 521 AAAACACATA TACTGTTGAA TTCCTCCCAA AGTTTCTTCA TAGGAGTGTA ATATATTGTG 10292 .......... .......... .......... .......... .......... .......... 521 ATATCGAGAA TACCTTGATT AAGATCATTT ATTTCCTTCT GAGTTTGGTA AAATTTTGCT 10232 .......... .......... .......... .......... .......... .......... 521 CCATTTGTCT GATCATATCG ATCCTCCAGT TCTGTCCACA ATTCCAGAGC ATCATTGACA 10172 .......... .......... .......... .......... .......... .......... 521 TATTCAACAC TATCAACAAT ATCTCGATAC AGAGAGTTGA GAATCCAGGA AGTAACCATA 10112 .......... .......... .......... .......... .......... .......... 521 TCATCACACC TCACCCATTG ATGATAAGTG GAATGATTCA CCTCTGGTCT CTTACACTCA 10052 .......... .......... .......... .......... .......... .......... 521 CCATTGATGA ACACTAGTTT GTTCTTCACT GACAAAGAAT GAAGTACACT ACGACGCCAT 9992 .......... .......... .......... .......... .......... .......... 521 GAATGAAAAC CAGTACTATT AAAAGGAACT GGTACAAGTA CTGCTCCAAG ATTATCTGAG 9932 .......... .......... .......... .......... .......... .......... 521 GATGACTGTA GAAATGACTC CCTGTATCAG TCCCAGATGA AGGAATACTG GCTGAACCAG 9872 .......... .......... .......... .......... .......... .......... 521 TGCTCGTAGA AGTAGGATCT ACCATTTTTA TCACAAAGAA AATTCGAAGG TTTACAGAGA 9812 .......... .......... .......... .......... .......... .......... 521 ATGAAATATG AAGATCTGAT GCGAAAATTG AAAAAGAAAG AAGCAGGAAA GATCAGAAAC 9752 .......... .......... .......... .......... .......... .......... 521 GTCCTCACTC TGATACCATG TTAATGTTGA AGATGATTGA AAACCTCCAT TGATGAGAAT 9692 .......... .......... .......... .......... .......... .......... 521 ATGAAAGCTT GATCAGAGAA GAGCATTGAA AATGTGTGCT ATTTTCATTG AGAACAGAAA 9632 .......... .......... .......... .......... .......... .......... 521 CATGAATGTG CAGTATTTAT ATAACAACTA AAGCAGAAAA TATCTAACTA ACTTTCTGAA 9572 .......... .......... .......... .......... .......... .......... 521 AATGAAAACT AACTAACTAA CTGATTTTTG ACAGCTAACT AACTATTCTA ACAACCTGAT 9512 .......... .......... .......... .......... .......... .......... 521 TAATTAAGCA TAATTACAAA TTTAATCTCA ATAAACATTC TTAACTTTAC ACTTTAATTA 9452 .......... .......... .......... .......... .......... .......... 521 CTTTGTTGCG ACATTTCGAT TAAAGCTTGT TGTGTGAAGT ACCACAACTA AAAAAATAGT 9392 .......... .......... .......... .......... .......... .......... 521 ATGCAGATTA TGCAATGTCG CATGATTAAC AAATAAGAAA ATCTATAAGC CGTAGTTTTG 9332 .......... .......... .......... .......... .......... .......... 521 TAATTTGATA CAAATAAATA ATTTTTTTCT TGAAGTTCTT GTGATTTAGC ATGACTATGA 9272 .......... .......... .......... .......... .......... .......... 521 AGAAATTATT TTTTTAAAAT ATATCAAATG AGTCGTGTAT TCGATCACGA CAAACAATTA 9212 .......... .......... .......... .......... .......... .......... 521 TGTAAATGGA GAAACGAATG TTTGCATTAG CCACTGATGG TAATTTGAAG AGAATGAAAA 9152 .......... .......... .......... .......... .......... .......... 521 TTATCAACCT CTAAATGTTG GTGTTGTGAA ACACAACAAA TGAAACAATG TTTCACCTAT 9092 .......... .......... .......... .......... .......... .......... 521 ATCTAGCAGC TTCTATAGCC CAAAATCTAT GGAGGTATTT TCCTTCATGT GCAAGTGTAG 9032 .......... .......... .......... .......... .......... .......... 521 ATATAGAAGG TAGAAACCTA TTGCAGACCA TAAATTATTG GTGGTATATG TTGAAGCCCC 8972 .......... .......... .......... .......... .......... .......... 521 TAACAAGTTT AGGATTTTCC TTAGAGCTAT ACCAACATTG ATAATGTGGA GCTTATGGAA 8912 .......... .......... .......... .......... .......... .......... 521 GAGGCGAAAT CATATTATGC ATGGAGGACA ACTTAACTTC GAAGGACTGA TACAACAAGT 8852 .......... .......... .......... .......... .......... .......... 521 AACAAAAAAA CATCTAGTGG CTGAAAACGA TAAGAACTTA AGTTTTAACC TAATTGGAAA 8792 .......... .......... .......... .......... .......... .......... 521 GACATGGTCT GAGGTGGTTA ATATATTAGG ATTCTACAAG TCTAAAATAT ACTATCACAA 8732 .......... .......... .......... .......... .......... .......... 521 TGTTGAGAGG AAGGCACCAA ATATTGATCA AGTGAAATGC AAAAAAGCAG GAGTTCTGTT 8672 .......... .......... .......... .......... .......... .......... 521 TCAGCGACAT GATGAAGATA TTAGGTCTGC TCAAGCTAAA GAAATAGGAC TTGACACAAA 8612 .......... .......... .......... .......... .......... .......... 521 CATAGAAGCA GAGCCCACAA CAATTCAAGA AGCTTTGGAA ATCGAAGAGA TTTCAAAATC 8552 .......... .......... .......... .......... .......... .......... 521 TCTTATTTGA AAAGAACATC ATACAAATGA CATAGAGGAT ATCATGAAAA ATTGCAAAAA 8492 .......... .......... .......... .......... .......... .......... 521 TAATTGAGGA CATAATGAAA TAAATGCAGA CACAGAAGGA TAAAATCAAA CATATTTTCA 8432 .......... .......... .......... .......... .......... .......... 521 GAAGACAATT CAATAGAAGA TTATTTAGCT AACCTAGCTA TTAAAAAAAC AGATATACAA 8372 .......... .......... .......... .......... .......... .......... 521 GAATTCAATG AATTTGCATA ATTACCAATA ACAGACAAAC ACATTATAAA TATGGAAAAA 8312 .......... .......... .......... .......... .......... .......... 521 ACACAGATTC CAACCATATA GAATAAGAAC ATGGAAAATT AGACCGAATA AAAATACAAA 8252 .......... .......... .......... .......... .......... .......... 521 TCCAGACATA TAGACAAACA AGGAAGGGGA ACAACAAAGC AACTTACATA AAAGTAAGCC 8192 .......... .......... .......... .......... .......... .......... 521 CGCAGAAAGG GATCATTAAA ATTGACAAAA TAAAGTTTTT CTTAATCTAT GTTAGTACAC 8132 .......... .......... .......... .......... .......... .......... 521 AAAAACTTTC AAAAAAAAAG GAGTACTCTT CATCTATAAC ATTCAAGCAT CGATTGTTAG 8072 .......... .......... .......... .......... .......... .......... 521 TTTTATGGCC CACGTGTGTT AATTTTTATG GTCCACGTTA ATATTGTTTA GTTTAATATT 8012 .......... .......... .......... .......... .......... .......... 521 TAATTACTAA TTAAATTCAA ATTCTAATTA GATAATTGGA GAAGTTACTG ACATGTGTGG 7952 .......... .......... .......... .......... .......... .......... 521 AGAACTGGGG AAGTAAGTTT GTAACTTCCA ACCACCCATT AAGTCTTTCA CTTTACCCAT 7892 .......... .......... .......... .......... .......... .......... 521 TATCTCTTCT AATTACCCAT TAAGTAGGGA GTTACTTGGT AGTTTTAAAA CTATCCATTA 7832 .......... .......... .......... .......... .......... .......... 521 TCTCCACTGC TCACCATGAT GGAAAGGTGT GAATGATGTT AAACACAATC TTATCTTAAA 7772 .......... .......... .......... .......... .......... .......... 521 GGGTCCTCTG TCTTCCATAA AGTTATGGTC TTATCCATCA AAACTATTCA TAAAGTATAA 7712 .......... .......... .......... .......... .......... .......... 521 CGCAAGAGAG ATAAACAACT TTTGAAGAAT GAAAACAAAA AGGCTTCCGC TCAATTAAAG 7652 .......... .......... .......... .......... .......... .......... 521 TTAAGATTCT TAAAAAATAA CTAGGTTGAC TCGGGTATGT ATTCTTGACT GAATTATTAT 7592 .......... .......... .......... .......... .......... .......... 521 AGTAATAAAT TTGTGTAAAA ATCATATAGT TCTAAGATCA TGAATAATTT ATAGGATTCA 7532 .......... .......... .......... .......... .......... .......... 521 TGAATGCATA GATTGTTTAT GTTTTCACAA TCATTAAAAT CCTAACATGT GGTATCAGAG 7472 .......... .......... .......... .......... .......... .......... 521 CCTGATTTAA GAACTAGTGA CTTTTCATAA AATTAATGTT TTCCTTATTT GAAAATGGTA 7412 .......... .......... .......... .......... .......... .......... 521 ATAGGTAGTA TTAAGTGAAA TAATTATTCA CTATCATGAT GTATTTTATT TTGAAATTAC 7352 .......... .......... .......... .......... .......... .......... 521 GTATATGAAA TCAGTTAATC AGCAAAATGG TCTAATCTTT GAAGAATTAA TTCAAAATAA 7292 .......... .......... .......... .......... .......... .......... 521 TAATGACTAA ACATATATTT AATTATCCAT TTTTTTATGC TTATAACTTA TACAACACTT 7232 .......... .......... .......... .......... .......... .......... 521 ACGGATATAT TGAAGTTTTT GGTTCTAACA TATTTATGGA TTACCCAAAG ATTGATTATT 7172 .......... .......... .......... .......... .......... .......... 521 TCATCTTATA ACCATTGAAC ATTAAAGAGA TAATTTGGAT GTGTCGTTAG TTTTATTTAT 7112 .......... .......... .......... .......... .......... .......... 521 TTAGTCAAAG ATGATATATT TTATTGATTG ACACATTAAA ATTATTGAAT TAAGTTAAAT 7052 .......... .......... .......... .......... .......... .......... 521 TCACATCTAA GCATCATTAT GTCTAAAGCT GTATTTTGAT GTTTCACCCA AAGGAGGACA 6992 .......... .......... .......... .......... .......... .......... 521 TCAAACATAC ATTTAAGAAT TTGTAAACCA TTTCTGAATT TGATAATAAG TTTAAAATTC 6932 .......... .......... .......... .......... .......... .......... 521 ACAACTCAAA GTATTAACAA ATGAGCATAT TATATTCATA TCATTTGCTC TACATTTGTA 6872 .......... .......... .......... .......... .......... .......... 521 CTCTGCCTCT GTTACAACCT TTAAAGGTCT TAACTTCTCA GATTGGTACG AACAGATCAA 6812 .......... .......... .......... .......... .......... .......... 521 ATTCCATCTC GGAGTTTTAG ATCTTGATGT TGCACTTTGC ACTGAGAATC CAACTGCTAT 6752 .......... .......... .......... .......... .......... .......... 521 TACTAAAATT AACAGTACTG AAGAAAGGTC TCATTATAAG CACTGAGATC GATCTAACAG 6692 .......... .......... .......... .......... .......... .......... 521 ATTAGGTGTC ACGACCCAAA TCGGGTCGTG ACTGGCACTC ACACTTACCC TCCTATGTGA 6632 .......... .......... .......... .......... .......... .......... 521 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATATAATA TCAACAGAAA GTAATGCGGA 6572 .......... .......... .......... .......... .......... .......... 521 AGACTTAAAC TCATTAATAA AAACCAATTC AATAGCTTCT AAAAGCTCAA CAACTATTAT 6512 .......... .......... .......... .......... .......... .......... 521 TATCCCCAAA ATCTGGAAGT CATCATCACA AGAACATCTA TCCTCAAATT ACTAATCTAA 6452 .......... .......... .......... .......... .......... .......... 521 GAGTATCTAA GAAGCTAAAA TACATAAAAA GCTAGTCTAT GCCGGAACTT CAAGGCATCA 6392 .......... .......... .......... .......... .......... .......... 521 AGACATGAAG AGGAAGATCC AGTCCAAGCT AGAAGCATTA GCTCACCCTG AAATCCGGAG 6332 |||| | |||||||| .......... .......... .......... .......... ......CCTG ATATCCGGAG 535 TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGCACGTTT GC 6280 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| || TAATGAAGAC TGGCTAGAGT TGCGGTTGAG TTGAAGACGA CGGTACGTTT GC 587 hqPGS_C04HBa0119A16.1-_SGN-E389445+ (6345 6280) ******************************************************************************** EST sequence 10 -strand 299 n (File: SGN-E373117-) 1 TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGA AGTCATCATC 61 ACAAGAACAT CTACTTCAAA TTACTAAATC TAAGAGTATC TAAGAAGCTA AAATACATAA 121 ACAGCTAGTC CATGCCGGAA CTTCAAGGCA TCAAGACATG AAGAAGAAGA TCCAGTCCAA 181 GCTAGAAGCG TTAGCTCACC CTGAAATCCG ATGTAATGAA GACTGGCTAG AGTTGCGGTT 241 GAGTTGAAGA CGACGGTACG TTTGCCAAAA TTACGACAGT ATTTGGACAA GCTAGAAGA Predicted gene structure (within gDNA segment 7316 to 5259): Exon 1 6544 6282 ( 263 n); cDNA 1 263 ( 263 n); score: 0.930 MATCH C04HBa0119A16.1- SGN-E373117- 0.930 263 0.880 C PGS_C04HBa0119A16.1-_SGN-E373117- (6544 6282) Alignment (genomic DNA sequence = upper lines): TTCAATAGCT TCTAAAAGCT CAACAACTAT TATTATCCCC AAAATCTGGA AGTCATCATC 6485 || | | ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGA AGTCATCATC 60 ACAAGAACAT CTATCCTCAA ATTACT-AAT CTAAGAGTAT CTAAGAAGCT AAAATACATA 6426 |||||||||| ||| | |||| |||||| ||| |||||||||| |||||||||| |||||||||| ACAAGAACAT CTA-CTTCAA ATTACTAAAT CTAAGAGTAT CTAAGAAGCT AAAATACATA 119 AAAAGCTAGT CTATGCCGGA ACTTCAAGGC ATCAAGACAT GAAGAGGAAG ATCCAGTCCA 6366 || ||||||| | |||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AACAGCTAGT CCATGCCGGA ACTTCAAGGC ATCAAGACAT GAAGAAGAAG ATCCAGTCCA 179 AGCTAGAAGC ATTAGCTCAC CCTGAAATCC GGAGTAATGA AGACTGGCTA GAGTTGCGGT 6306 |||||||||| ||||||||| |||||||||| | ||||||| |||||||||| |||||||||| AGCTAGAAGC GTTAGCTCAC CCTGAAATCC GATGTAATGA AGACTGGCTA GAGTTGCGGT 239 TGAGTTGAAG ACGACGGCAC GTTT 6282 |||||||||| ||||||| || |||| TGAGTTGAAG ACGACGGTAC GTTT 263 hqPGS_C04HBa0119A16.1-_SGN-E373117- (6544 6282) ******************************************************************************** EST sequence 61 +strand 299 n (File: SGN-E373116+) 1 TTTTTTTTTT CTAAAAACTC AACAACTATT ATTATCCCCA AAATCTGGAA GTCATCATCA 61 CAAGAACATC TACTTCAAAT TACTAAATCT AAGAGTATCT AAGAAGCTAA AATACATAAA 121 CAGCTAGTCC ATGCCGGAAC TTCAAGGCAT CAAGACATGA AGAAGAAGAT CCAGTCCAAG 181 CTAGAAGCGT TAGCTCACCC TGAAATCCGA TGTAATGAAG ACTGGCTAGA GTTGCGGTTG 241 AGTTGAAGAC GACGGTACGT TTGCCAAAAT TACGACAGTA TTTGGACAAG CTAGAAGAG Predicted gene structure (within gDNA segment 7296 to 5239): Exon 1 6535 6282 ( 254 n); cDNA 9 262 ( 254 n); score: 0.951 MATCH C04HBa0119A16.1- SGN-E373116+ 0.951 254 0.849 C PGS_C04HBa0119A16.1-_SGN-E373116+ (6535 6282) Alignment (genomic DNA sequence = upper lines): TTCTAAAAGC TCAACAACTA TTATTATCCC CAAAATCTGG AAGTCATCAT CACAAGAACA 6476 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTAAAAAC TCAACAACTA TTATTATCCC CAAAATCTGG AAGTCATCAT CACAAGAACA 68 TCTATCCTCA AATTACT-AA TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAAAAGCTAG 6417 |||| | ||| ||||||| || |||||||||| |||||||||| |||||||||| ||| |||||| TCTA-CTTCA AATTACTAAA TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAACAGCTAG 127 TCTATGCCGG AACTTCAAGG CATCAAGACA TGAAGAGGAA GATCCAGTCC AAGCTAGAAG 6357 || ||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TCCATGCCGG AACTTCAAGG CATCAAGACA TGAAGAAGAA GATCCAGTCC AAGCTAGAAG 187 CATTAGCTCA CCCTGAAATC CGGAGTAATG AAGACTGGCT AGAGTTGCGG TTGAGTTGAA 6297 | |||||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||||| CGTTAGCTCA CCCTGAAATC CGATGTAATG AAGACTGGCT AGAGTTGCGG TTGAGTTGAA 247 GACGACGGCA CGTTT 6282 |||||||| | ||||| GACGACGGTA CGTTT 262 hqPGS_C04HBa0119A16.1-_SGN-E373116+ (6535 6282) ******************************************************************************** EST sequence 18 -strand 219 n (File: SGN-E298638-) 1 TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGC AGTCATCATC 61 ACAAGAACAT GTACTTCAAA TTACTAAATC TAAGAGTATC TAAGAAGCTA AAATACATAA 121 ACAGCTAGTC CATGCCGGAA CTTCAAGGCA TCAAGACATG AAGAAGAAGA TCCAGTCCAA 181 GCTAGAAGCG TTAGCTCACC CTGAAATCCG ATGTAATGA Predicted gene structure (within gDNA segment 7316 to 5645): Exon 1 6544 6326 ( 219 n); cDNA 1 219 ( 219 n); score: 0.911 MATCH C04HBa0119A16.1- SGN-E298638- 0.911 219 1.000 C PGS_C04HBa0119A16.1-_SGN-E298638- (6544 6326) Alignment (genomic DNA sequence = upper lines): TTCAATAGCT TCTAAAAGCT CAACAACTAT TATTATCCCC AAAATCTGGA AGTCATCATC 6485 || | | ||||||| || |||||||||| |||||||||| ||||||||| |||||||||| TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGC AGTCATCATC 60 ACAAGAACAT CTATCCTCAA ATTACT-AAT CTAAGAGTAT CTAAGAAGCT AAAATACATA 6426 |||||||||| || | |||| |||||| ||| |||||||||| |||||||||| |||||||||| ACAAGAACAT GTA-CTTCAA ATTACTAAAT CTAAGAGTAT CTAAGAAGCT AAAATACATA 119 AAAAGCTAGT CTATGCCGGA ACTTCAAGGC ATCAAGACAT GAAGAGGAAG ATCCAGTCCA 6366 || ||||||| | |||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AACAGCTAGT CCATGCCGGA ACTTCAAGGC ATCAAGACAT GAAGAAGAAG ATCCAGTCCA 179 AGCTAGAAGC ATTAGCTCAC CCTGAAATCC GGAGTAATGA 6326 |||||||||| ||||||||| |||||||||| | ||||||| AGCTAGAAGC GTTAGCTCAC CCTGAAATCC GATGTAATGA 219 hqPGS_C04HBa0119A16.1-_SGN-E298638- (6544 6326) ******************************************************************************** EST sequence 26 -strand 666 n (File: SGN-E368629-) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTATAA AAACCAATTC AATAACTATT ATTTCCCAAA 61 ATCTGGAAGT TATCATCACA AGAACATCTA CTTCGAATTA CTAAATCTAG AAGTATCTAA 121 GAGCCTAAAA TACATAACAC AGTTAGTCCA TGCCGAAACT TCAAGGCATC AAGACATAAA 181 GAAGAAGATC CAGTCCAAGC TAGAAGCTTT GTTTTATCGA AAAAAGGTGA TTTTTCGAAA 241 AGAGTTTGTT TTATTTTAAA GTATTTTTCG ACTTTAGGAG TCGCCACTTA ATTTTTAAGA 301 AAAATCAAGA AAACTCATTC TCAAAACAAT TTAAACAGAA AAGTCGTTTT GAAAATATTT 361 TTTAGGATTC GGGATTCTTA TTAGCGTCTT AGGAAGGTGT TTAAGGCACC TAAGACACTC 421 CGTTAAATAC GGTTTTCCAA CGACTAACTT ATTTGATTAT TTTTATTTTT ACCCTTTGCA 481 AATTTATTTG AACTTTTATC ACGATTTACT TAGCCAAACT TTGCAAATTT GAGATATTAA 541 TCTTTTAAGA TTCCGTCTTA GTTAAACTTT CTAAGCCTTA ACTCTCTAAG CAGACTTTCA 601 AATTTTAAAC CTCTATCGTT TCAAAACTTC AATTTTTATT TTTTAGTTTC ATAAAGCAAA 661 AGGCGT Predicted gene structure (within gDNA segment 7657 to 1166): Exon 1 6525 6356 ( 170 n); cDNA 39 207 ( 169 n); score: 0.871 PPA cDNA 28 1 MATCH C04HBa0119A16.1- SGN-E368629- 0.871 170 0.255 C PGS_C04HBa0119A16.1-_SGN-E368629- (6525 6356) Alignment (genomic DNA sequence = upper lines): TCAACAACTA TTATTATCCC CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA 6466 |||| ||||| ||||| | || |||||||||| |||| ||||| |||||||||| |||| | || TCAATAACTA TTATT-T-CC CAAAATCTGG AAGTTATCAT CACAAGAACA TCTA-CTTCG 95 AATTACT-AA TCTAAGAGTA TCTAAGAAGC TAAAATACAT AA-AAAGCTA GTCTATGCCG 6408 ||||||| || |||| |||| ||||||| | |||||||||| || | || || ||| |||||| AATTACTAAA TCTAGAAGTA TCTAAGAGCC TAAAATACAT AACACAGTTA GTCCATGCCG 155 GAACTTCAAG GCATCAAGAC ATGAAGAGGA AGATCCAGTC CAAGCTAGAA GC 6356 ||||||||| |||||||||| || |||| || |||||||||| |||||||||| || AAACTTCAAG GCATCAAGAC ATAAAGAAGA AGATCCAGTC CAAGCTAGAA GC 207 hqPGS_C04HBa0119A16.1-_SGN-E368629- (6525 6356) ******************************************************************************** EST sequence 13 -strand 402 n (File: SGN-E352844-) 1 TTTTTTTTAT AAAAACCAAT TCAATAACTA TTATTTCCCA AAATCTGGAA GTTATCATCA 61 CAAGAACATC TACTTCGAAT TACTAAATCT AAGAGTATCT AAGAAGCTAA AATACATAAA 121 CAGCTAGTCC ATGCCGGAAC TTCAAGGCAT CAAGACATGA AGAAGAAGAT CCAGTCCAAG 181 CTAGAAGCTT TGTTTTATCG AAAAAAGGTG ATTTTTCGAA AAGAGTTTGT TTTATTTTAA 241 AGTATTTTTC GACTTTAGGA GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTCATT 301 CTCAAAACAA TTTAAACAGA AAAGTCGTTT TGAAAATATT TTTTAGGATT CGGGATTCTT 361 ATTAGCGTCT TAGGAAGGTG TTTAAGGCAC CTAAGACACT CC Predicted gene structure (within gDNA segment 7477 to 3616): Exon 1 6525 6356 ( 170 n); cDNA 21 188 ( 168 n); score: 0.926 MATCH C04HBa0119A16.1- SGN-E352844- 0.926 170 0.423 C PGS_C04HBa0119A16.1-_SGN-E352844- (6525 6356) Alignment (genomic DNA sequence = upper lines): TCAACAACTA TTATTATCCC CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA 6466 |||| ||||| ||||| | || |||||||||| |||| ||||| |||||||||| |||| | || TCAATAACTA TTATT-T-CC CAAAATCTGG AAGTTATCAT CACAAGAACA TCTA-CTTCG 77 AATTACT-AA TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAAAAGCTAG TCTATGCCGG 6407 ||||||| || |||||||||| |||||||||| |||||||||| ||| |||||| || ||||||| AATTACTAAA TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAACAGCTAG TCCATGCCGG 137 AACTTCAAGG CATCAAGACA TGAAGAGGAA GATCCAGTCC AAGCTAGAAG C 6356 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| | AACTTCAAGG CATCAAGACA TGAAGAAGAA GATCCAGTCC AAGCTAGAAG C 188 hqPGS_C04HBa0119A16.1-_SGN-E352844- (6525 6356) ******************************************************************************** EST sequence 24 -strand 620 n (File: SGN-E238551-) 1 CTATTATTTC CCAAAATCTG GAAGTTATCA TCACAAGAAC ATCTACTTCG AATTACTAAA 61 TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAACAGCTAG TCCATGCCGG AACTTCAAGG 121 CATCAAGACA TGAAGAAGAA GATCCAGTCC AAGCTAGAAG CTTTGTTTTA TCGAAAAAAG 181 GTGATTTTTC GAAAAGAGTT TGTTTTATTT TAAAGTATTT TTCGACTTTA GGAGTCGCCA 241 CTTAATTTTT AAGAAAAATC AAGAAAACTC ATTCTCAAAA CAATTTAAAC AGAAAAGTCG 301 TTTTGAAAAT ATTTTTTAGG ATTCGGGATT CTTATTAGCG TCTTAGGAAG GTGTTTAAGG 361 CACCTAAGAC ACTCCGTTAA ATACGGTTTT CCAACGACTA ACTTATTTGA TTATTTTTAT 421 TTTTACCCTT TGCAAATTTA TTTGAACTTT TATCACGATT TACTTAGCCA AACTTTGCAA 481 ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA CTTTCTAAGC CTTAACTCTC 541 TAAGCAGACT TTCAAATTTT AAACCTCTAT CGTTTCAAAA CTTCAATTTT TATTTTTTAG 601 TTTCATAAAG CAAAAGGCGT Predicted gene structure (within gDNA segment 7207 to 1166): Exon 1 6518 6356 ( 163 n); cDNA 1 161 ( 161 n); score: 0.929 MATCH C04HBa0119A16.1- SGN-E238551- 0.929 163 0.263 C PGS_C04HBa0119A16.1-_SGN-E238551- (6518 6356) Alignment (genomic DNA sequence = upper lines): CTATTATTAT CCCCAAAATC TGGAAGTCAT CATCACAAGA ACATCTATCC TCAAATTACT 6459 |||||||| | ||||||||| ||||||| || |||||||||| ||||||| | || ||||||| CTATTATT-T -CCCAAAATC TGGAAGTTAT CATCACAAGA ACATCTA-CT TCGAATTACT 57 -AATCTAAGA GTATCTAAGA AGCTAAAATA CATAAAAAGC TAGTCTATGC CGGAACTTCA 6400 ||||||||| |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| AAATCTAAGA GTATCTAAGA AGCTAAAATA CATAAACAGC TAGTCCATGC CGGAACTTCA 117 AGGCATCAAG ACATGAAGAG GAAGATCCAG TCCAAGCTAG AAGC 6356 |||||||||| ||||||||| |||||||||| |||||||||| |||| AGGCATCAAG ACATGAAGAA GAAGATCCAG TCCAAGCTAG AAGC 161 hqPGS_C04HBa0119A16.1-_SGN-E238551- (6518 6356) Total number of EST alignments reported: 97 ________________________________________________________________________________ Predicted gene locations (1) in segment 1 to 11681: PGL 1 (- strand): 6685 1 AGS-1 (2686 1) SCR (e 0.893) Exon 1 2686 1 (2686 n); score: 0.893 PGS (408 1) SGN-E352180+ PGS (596 44) SGN-E329287- PGS (764 49) SGN-E356614+ PGS (763 100) SGN-E352401+ PGS (961 257) SGN-E349404+ PGS (961 289) SGN-E351625+ PGS (961 354) SGN-E357065+ PGS (961 448) SGN-E352365+ PGS (1403 614) SGN-E356912+ PGS (1327 630) SGN-E356209+ PGS (1483 720) SGN-E214046+ PGS (1401 869) SGN-E353805+ PGS (1487 929) SGN-E244046+ PGS (1870 1328) SGN-E355026+ PGS (2097 1336) SGN-E355244+ PGS (1694 1364) SGN-E352716+ PGS (2054 1394) SGN-E352117- PGS (2097 1437) SGN-E351414+ PGS (1846 1463) SGN-E242765+ PGS (2166 1508) SGN-E355232+ PGS (2615 1937) SGN-E368762+ PGS (2686 1974) SGN-E379315+ PGS (2686 2091) SGN-E375319+ PGS (2686 2161) SGN-E204434+ PGS (2615 2257) SGN-E240817+ 3-phase translation of AGS-1 (-strand): . . . . . . 2686 GAATCCCTTGACAAATCGACGGTAATAGCTAGCTAAACCAACAAAGCTCCTTATTTCTGA E S L D K S T V I A S - T N K A P Y F - N P L T N R R - - L A K P T K L L I S D I P - Q I D G N S - L N Q Q S S L F L . . . . . . 2626 CACATTAGTAGGTCTTACCCAATTCTTTACTGTCTCAATCTTAGAAGGATAGACCATCAC H I S R S Y P I L Y C L N L R R I D H H T L V G L T Q F F T V S I L E G - T I T T H - - V L P N S L L S Q S - K D R P S . . . . . . 2566 CTCATCCTTAGAAACCACATTCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTT L I L R N H I P Q E G H C I - P K L T L S S L E T T F P K K D T A S S Q N S H L P H P - K P H S P R R T L H L A K T H T . . . . . . 2506 GGAGAATTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAGTGCTT G E F G I K L F L P Q H F Q Y N S Q V L E N L A - S F F S L N I S N T I L K C F W R I W H K A F S P S T F P I Q F S S A . . . . . . 2446 CTCGTGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAA L V F L L A L - V Y Q Y I I N K Y D H K S C S F L L F E Y T N I S S I N T I T K S R V P S C S L S I P I Y H Q - I R S Q . . . . . . 2386 GAGATCCAGATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAAAGCAGCAGGGGCATT E I Q I W L K N P V H Q A H E S S R G I R S R Y G L K I P F I K L M K A A G A F R D P D M A - K S R S S S S - K Q Q G H . . . . . . 2326 CGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTCCGAAAAGCAGT R K T K R H H Y K F V M P I P G P K S S V R P K D I T T N S - C P Y L V R K A V S - D Q K T S L Q I R N A H T W S E K Q . . . . . . 2266 TTTTGGCACATCCATTGCCAGTATCTTCAATTGATGATAACCGAACCTCAAGTCAATCTT F W H I H C Q Y L Q L M I T E P Q V N L F G T S I A S I F N - - - P N L K S I L F L A H P L P V S S I D D N R T S S Q S . . . . . . 2206 AGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAATGGGATA R E D T S T L - L I E Q V I N A R N G I E K T Q A P C N - S N K S S M R G M G Y - R R H K H L V T D R T S H Q C E E W D . . . . . . 2146 CTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTTTATGCACATCCGAAAACTCCC L V L N S Y L V Q L P V V Y A H P K T P L F L I V T L F N C R - F M H I R K L P T C S - - L P C S T A G S L C T S E N S . . . . . . 2086 ATCCTTCTTCTTCACAAATAACACTGGAGCTTCCCAAGGGGATGCACTTGGTCTAATGAA I L L L H K - H W S F P R G C T W S N E S F F F T N N T G A S Q G D A L G L M K H P S S S Q I T L E L P K G M H L V - - . . . . . . 2026 GCCTTTGCTTAACAACTCTTGAAGTTAAGCTTTTAACTCTCTTAACTCCGCGGGAGCCAT A F A - Q L L K L S F - L S - L R G S H P L L N N S - S - A F N S L N S A G A I S L C L T T L E V K L L T L L T P R E P . . . . . . 1966 TTTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATGCAGAAGTCAAT F I R G Y R N G A S T R F K I N A E V N L - G G I E M G R V P G S R S M Q K S I F Y K G V - K W G E Y P V Q D Q C R S Q . . . . . . 1906 ATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGAC I P I W W H T R K I C R E H I Q K L T D S L S G G I P G R S A G N T S R N S R T Y P Y L V A Y Q E D L Q G T H P E T H G . . . . . . 1846 TACCGAAACCGACTCAATTGGAGGTACTTGGGTAGTATCATCTCGGAGGTGTGCCAAGAA Y R N R L N W R Y L G S I I S E V C Q E T E T D S I G G T W V V S S R R C A K N L P K P T Q L E V L G - Y H L G G V P R . . . . . . 1786 CGCTAAACAACCCTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATAATACGAACCGG R - T T L T N H F L S T K K G D N T N R A K Q P L L T I F L A R R K E I I R T G T L N N P Y - P F S - H E E R R - Y E P . . . . . . 1726 ATTGGAAGTGTAGTCACCCTCCCACACTAATGGATCTGTACCAGGCTTGGCTAACGTCAC I G S V V T L P H - W I C T R L G - R H L E V - S P S H T N G S V P G L A N V T D W K C S H P P T L M D L Y Q A W L T S . . . . . . 1666 GGTTTTAGCATTGCAATCCAAGATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAGAAT G F S I A I Q D R K I R R K P S H T Q N V L A L Q S K I A K F G E S Q V I P R I R F - H C N P R S Q N S E K A K S Y P E . . . . . . 1606 TACATCAAAATCCACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAA Y I K I H H F - D N Q V Y I S I A P H K T S K S T I S K I T K S T - V L L P T K L H Q N P P F L R - P S L H K Y C S P Q . . . . . . 1546 AGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGA S H Q T R P I Y F F N Y H R L T H R S R V T R P D L Y T F S T I T D S P T G V E K S P D Q T Y I L F Q L S Q T H P P E - . . . . . . 1486 AACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTATGACCATTAGCAAATGAGGA N T N R H V K Q F T M - I M T I S K - G T R I G M S S N S Q C K L - P L A N E E K H E - A C Q A I H N V N Y D H - Q M R . . . . . . 1426 AGATATATAAGAAAATGTGGATCCAGGGTCAAATAATACAGAAGCCATACAATCACAAAC R Y I R K C G S R V K - Y R S H T I T N D I - E N V D P G S N N T E A I Q S Q T K I Y K K M W I Q G Q I I Q K P Y N H K . . . . . . 1366 CAAAAGATTACCTGTGATAACAGCATCTGATGTCTCCGCTTCCGACCGCCCAGGGAAAGC Q K I T C D N S I - C L R F R P P R E S K R L P V I T A S D V S A S D R P G K A P K D Y L - - Q H L M S P L P T A Q G K . . . . . . 1306 GTAACAATGGGCCCTCTCACCTGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGC V T M G P L T C L S V A P T M L - C S G - Q W A L S P V C P L P L P C C D V V A R N N G P S H L S V R C P Y H V V M - W . . . . . . 1246 TCCAGTTTGCCCATCACCCCGGCCGTTTTGGTGACCACCATTACCTCGACCACCGCGTCC S S L P I T P A V L V T T I T S T T A S P V C P S P R P F W - P P L P R P P R P L Q F A H H P G R F G D H H Y L D H R V . . . . . . 1186 TCCAGAATGACGGCCTCTTCCATAACCACCTCTACCTCTAACATTTGGAGGTCTGTAACT S R M T A S S I T T S T S N I W R S V T P E - R P L P - P P L P L T F G G L - L L Q N D G L F H N H L Y L - H L E V C N . . . . . . 1126 CTGTTTTGGACAATACCTCTTAATGTGTCCAGTCTCCCCACATCCATAACACTTTCTGGA L F W T I P L N V S S L P T S I T L S G C F G Q Y L L M C P V S P H P - H F L D S V L D N T S - C V Q S P H I H N T F W . . . . . . 1066 TTCAAGCATAGTTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGT F K H S S L R E V L T G L R W T P N Y S S S I V L S E K C - P V - G G P P T T V I Q A - F S Q R S V D R S E V D P Q L Q . . . . . . 1006 CTGTAGTGAAGACTGAATTGGTCAGACTGAGTAACCTCCTGAACCCTGTCCTCTAGAGTA L - - R L N W S D - V T S - T L S S R V C S E D - I G Q T E - P P E P C P L E - S V V K T E L V R L S N L L N P V L - S . . . . . . 946 AGAACCATTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTAGTTGCCATGGTGAAGTA R T I K L T S L S K P F - C S C H G E V E P L N S P P F R N L F D V V A M V K - K N H - T H L P F E T F L M - L P W - S . . . . . . 886 ATCTGGCTTCACTTCCTCTACCTCTATCACGAAGTCTACCACTTTTTGAAAAGATTTCGC I W L H F L Y L Y H E V Y H F L K R F R S G F T S S T S I T K S T T F - K D F A N L A S L P L P L S R S L P L F E K I S . . . . . . 826 TGTAGTTGCTACCTGTAAGGCTGAAATCCGCAACTCTGATCACAACCCCTTCACAAAACA C S C Y L - G - N P Q L - S Q P L H K T V V A T C K A E I R N S D H N P F T K Q L - L L P V R L K S A T L I T T P S Q N . . . . . . 766 GTGAATCCGCTCTTGTAGACTGAAACATAGTTGGGTGGCATACCGGGATAATGCACGAAA V N P L L - T E T - L G G I P G - C T K - I R S C R L K H S W V A Y R D N A R N S E S A L V D - N I V G W H T G I M H E . . . . . . 706 CTTAGCCTCATATGCAGTAACCGACATCCTACCTTGCTCTAGGCTCAAAAATTCATCTCT L S L I C S N R H P T L L - A Q K F I S L A S Y A V T D I L P C S R L K N S S L T - P H M Q - P T S Y L A L G S K I H L . . . . . . 646 TTTCATATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGATGC F H I P Q S P G D I L L H K Q A R E - C F I S L K V R G I Y F S I N K L E N D A F S Y P S K S G G Y T S P - T S - R M M . . . . . . 586 CCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTT P S H R W C L C W L T L N M - P P P H F Q V I G G A S V G - H S T C D R H H I L P K S - V V P L L V D T Q H V T A T T F . . . . . . 526 GGCGTTCCCTTGAAACTGATAAGTCACAAACTCAACACCAAACCGTTCTACTATACCCAT G V P L K L I S H K L N T K P F Y Y T H A F P - N - - V T N S T P N R S T I P I W R S L E T D K S Q T Q H Q T V L L Y P . . . . . . 466 CTTGTGTAGTAGCTCATGATAGTTAACCAAAAAATCGTAGGCATCCTCAGATTCAGCACC L V - - L M I V N Q K I V G I L R F S T L C S S S - - L T K K S - A S S D S A P S C V V A H D S - P K N R R H P Q I Q H . . . . . . 406 CTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGT L E D W R F Q F Q E L T E K F M L I I C L K T G G F N F K N L L K S S C - S F V P - R L E V S I S R T Y - K V H A D H L . . . . . . 346 CATTATCGGCCCTGTAGTCAGACGAGGAAACGTACCTATTTCCAATGAGGCATCCATGCG H Y R P C S Q T R K R T Y F Q - G I H A I I G P V V R R G N V P I S N E A S M R S L S A L - S D E E T Y L F P M R H P C . . . . . . 286 GGGAGCCATAGTAGCCGCATGTTGTACCTCCAGAGCCTGAGGTGCTGGTGCAGAAAACAC G S H S S R M L Y L Q S L R C W C R K H G A I V A A C C T S R A - G A G A E N T G E P - - P H V V P P E P E V L V Q K T . . . . . . 226 TGGAGGTGTTTGACCTTGATCAGATAACCCACTAAGATAAGTAAGGACCTGATTTATCAT W R C L T L I R - P T K I S K D L I Y H G G V - P - S D N P L R - V R T - F I I L E V F D L D Q I T H - D K - G P D L S . . . . . . 166 CTCTGGGGTAGGTTGGGGTGGTAGTTCCTCATTCTGCACTTGCTCAGTTTCCCCTTCCTC L W G R L G W - F L I L H L L S F P F L S G V G W G G S S S F C T C S V S P S S S L G - V G V V V P H S A L A Q F P L P . . . . . . 106 ACCCTCTCTTACTACTTCTTTAGTCGGTGGAGGAGTCACCGCCCTAGTACTAGATGGGAC T L S Y Y F F S R W R S H R P S T R W D P S L T T S L V G G G V T A L V L D G T H P L L L L L - S V E E S P P - Y - M G . . . . . 46 GGGCGCTTGTCCTCTTCCCCTAGAGGATGTCCTCCCACGACCTCTA G R L S S S P R G C P P T T S G A C P L P L E D V L P R P L R A L V L F P - R M S S H D L Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-1_PPS_1 (1255 1001) (frame '1'; 252 bp, 84 residues) 1 CSGSSLPITP AVLVTTITST TASSRMTASS ITTSTSNIWR SVTLFWTIPL NVSSLPTSIT 61 LSGFKHSSLR EVLTGLRWTP NYSL- >C04HBa0119A16.1-_PGL-1_AGS-1_PPS_2 (1959 1714) (frame '2'; 243 bp, 81 residues) 1 GGIEMGRVPG SRSMQKSISL SGGIPGRSAG NTSRNSRTTE TDSIGGTWVV SSRRCAKNAK 61 QPLLTIFLAR RKEIIRTGLE V- >C04HBa0119A16.1-_PGL-1_AGS-1_PPS_3 (2422 2183) (frame '1'; 237 bp, 79 residues) 1 VYQYIINKYD HKEIQIWLKN PVHQAHESSR GIRKTKRHHY KFVMPIPGPK SSFWHIHCQY 61 LQLMITEPQV NLREDTSTL- >C04HBa0119A16.1-_PGL-1_AGS-1_PPS_4 (762 556) (frame '2'; 204 bp, 68 residues) 1 IRSCRLKHSW VAYRDNARNL ASYAVTDILP CSRLKNSSLF ISLKVRGIYF SINKLENDAQ 61 VIGGASVG- 3-phase translation of AGS-1 (+strand): . . . . . . 1 TAGAGGTCGTGGGAGGACATCCTCTAGGGGAAGAGGACAAGCGCCCGTCCCATCTAGTAC - R S W E D I L - G K R T S A R P I - Y R G R G R T S S R G R G Q A P V P S S T E V V G G H P L G E E D K R P S H L V . . . . . . 61 TAGGGCGGTGACTCCTCCACCGACTAAAGAAGTAGTAAGAGAGGGTGAGGAAGGGGAAAC - G G D S S T D - R S S K R G - G R G N R A V T P P P T K E V V R E G E E G E T L G R - L L H R L K K - - E R V R K G K . . . . . . 121 TGAGCAAGTGCAGAATGAGGAACTACCACCCCAACCTACCCCAGAGATGATAAATCAGGT - A S A E - G T T T P T Y P R D D K S G E Q V Q N E E L P P Q P T P E M I N Q V L S K C R M R N Y H P N L P Q R - - I R . . . . . . 181 CCTTACTTATCTTAGTGGGTTATCTGATCAAGGTCAAACACCTCCAGTGTTTTCTGCACC P Y L S - W V I - S R S N T S S V F C T L T Y L S G L S D Q G Q T P P V F S A P S L L I L V G Y L I K V K H L Q C F L H . . . . . . 241 AGCACCTCAGGCTCTGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGCCTC S T S G S G G T T C G Y Y G S P H G C L A P Q A L E V Q H A A T M A P R M D A S Q H L R L W R Y N M R L L W L P A W M P . . . . . . 301 ATTGGAAATAGGTACGTTTCCTCGTCTGACTACAGGGCCGATAATGACAAATGATCAGCA I G N R Y V S S S D Y R A D N D K - S A L E I G T F P R L T T G P I M T N D Q H H W K - V R F L V - L Q G R - - Q M I S . . . . . . 361 TGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGA - T F Q - V L E I E T S S L Q G C - I - E L F S K F L K L K P P V F K G A E S E M N F S V S S - N - N L Q S S R V L N L . . . . . . 421 GGATGCCTACGATTTTTTGGTTAACTATCATGAGCTACTACACAAGATGGGTATAGTAGA G C L R F F G - L S - A T T Q D G Y S R D A Y D F L V N Y H E L L H K M G I V E R M P T I F W L T I M S Y Y T R W V - - . . . . . . 481 ACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCG T V W C - V C D L S V S R E R Q N V V A R F G V E F V T Y Q F Q G N A K M W W R N G L V L S L - L I S F K G T P K C G G . . . . . . 541 GTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCTCTAG V T C - V S T N R G T T Y D L G I I L - S H V E C Q P T E A P P M T W A S F S S G H M L S V N Q Q R H H L - L G H H S L . . . . . . 601 CTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATATGAAAAGAGATGAATTTTT L V Y G E V Y P P D F E G Y E K R - I F L F M E K Y I P R T L R D M K R D E F L A C L W R S I S P G L - G I - K E M N F . . . . . . 661 GAGCCTAGAGCAAGGTAGGATGTCGGTTACTGCATATGAGGCTAAGTTTCGTGCATTATC E P R A R - D V G Y C I - G - V S C I I S L E Q G R M S V T A Y E A K F R A L S - A - S K V G C R L L H M R L S F V H Y . . . . . . 721 CCGGTATGCCACCCAACTATGTTTCAGTCTACAAGAGCGGATTCACTGTTTTGTGAAGGG P V C H P T M F Q S T R A D S L F C E G R Y A T Q L C F S L Q E R I H C F V K G P G M P P N Y V S V Y K S G F T V L - R . . . . . . 781 GTTGTGATCAGAGTTGCGGATTTCAGCCTTACAGGTAGCAACTACAGCGAAATCTTTTCA V V I R V A D F S L T G S N Y S E I F S L - S E L R I S A L Q V A T T A K S F Q G C D Q S C G F Q P Y R - Q L Q R N L F . . . . . . 841 AAAAGTGGTAGACTTCGTGATAGAGGTAGAGGAAGTGAAGCCAGATTACTTCACCATGGC K S G R L R D R G R G S E A R L L H H G K V V D F V I E V E E V K P D Y F T M A K K W - T S - - R - R K - S Q I T S P W . . . . . . 901 AACTACATCAAAAAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCTAGAGGACA N Y I K K V S K G R - V - W F L L - R T T T S K R F R K G G E F N G S Y S R G Q Q L H Q K G F E R E V S L M V L T L E D . . . . . . 961 GGGTTCAGGAGGTTACTCAGTCTGACCAATTCAGTCTTCACTACAGACTGTAGTTGGGGG G F R R L L S L T N S V F T T D C S W G G S G G Y S V - P I Q S S L Q T V V G G R V Q E V T Q S D Q F S L H Y R L - L G . . . . . . 1021 TCCACCTCAGACCGGTCAACACTTCTCTGAGAGAACTATGCTTGAATCCAGAAAGTGTTA S T S D R S T L L - E N Y A - I Q K V L P P Q T G Q H F S E R T M L E S R K C Y V H L R P V N T S L R E L C L N P E S V . . . . . . 1081 TGGATGTGGGGAGACTGGACACATTAAGAGGTATTGTCCAAAACAGAGTTACAGACCTCC W M W G D W T H - E V L S K T E L Q T S G C G E T G H I K R Y C P K Q S Y R P P M D V G R L D T L R G I V Q N R V T D L . . . . . . 1141 AAATGTTAGAGGTAGAGGTGGTTATGGAAGAGGCCGTCATTCTGGAGGACGCGGTGGTCG K C - R - R W L W K R P S F W R T R W S N V R G R G G Y G R G R H S G G R G G R Q M L E V E V V M E E A V I L E D A V V . . . . . . 1201 AGGTAATGGTGGTCACCAAAACGGCCGGGGTGATGGGCAAACTGGAGCCACTACATCACA R - W W S P K R P G - W A N W S H Y I T G N G G H Q N G R G D G Q T G A T T S Q E V M V V T K T A G V M G K L E P L H H . . . . . . 1261 ACATGGTAGGGGCAACGGACAGACAGGTGAGAGGGCCCATTGTTACGCTTTCCCTGGGCG T W - G Q R T D R - E G P L L R F P W A H G R G N G Q T G E R A H C Y A F P G R N M V G A T D R Q V R G P I V T L S L G . . . . . . 1321 GTCGGAAGCGGAGACATCAGATGCTGTTATCACAGGTAATCTTTTGGTTTGTGATTGTAT V G S G D I R C C Y H R - S F G L - L Y S E A E T S D A V I T G N L L V C D C M G R K R R H Q M L L S Q V I F W F V I V . . . . . . 1381 GGCTTCTGTATTATTTGACCCTGGATCCACATTTTCTTATATATCTTCCTCATTTGCTAA G F C I I - P W I H I F L Y I F L I C - A S V L F D P G S T F S Y I S S S F A N W L L Y Y L T L D P H F L I Y L P H L L . . . . . . 1441 TGGTCATAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGG W S - F T L - I A - H A Y S C F Y S G G G H N L H C E L L D M P I R V S T P V G M V I I Y I V N C L T C L F V F L L R W . . . . . . 1501 TGAGTCTGTGATAGTTGAAAAAGTATATAGGTCTGGTCTGGTGACTTTTGTGGGGAGCAA - V C D S - K S I - V W S G D F C G E Q E S V I V E K V Y R S G L V T F V G S N V S L - - L K K Y I G L V W - L L W G A . . . . . . 1561 TACTTATGTAGACTTGGTTATCTTAGAAATGGTGGATTTTGATGTAATTCTGGGTATGAC Y L C R L G Y L R N G G F - C N S G Y D T Y V D L V I L E M V D F D V I L G M T I L M - T W L S - K W W I L M - F W V - . . . . . . 1621 TTGGCTTTCTCCGAATTTTGCGATCTTGGATTGCAATGCTAAAACCGTGACGTTAGCCAA L A F S E F C D L G L Q C - N R D V S Q W L S P N F A I L D C N A K T V T L A K L G F L R I L R S W I A M L K P - R - P . . . . . . 1681 GCCTGGTACAGATCCATTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATTAT A W Y R S I S V G G - L H F Q S G S Y Y P G T D P L V W E G D Y T S N P V R I I S L V Q I H - C G R V T T L P I R F V L . . . . . . 1741 CTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAGGGTTGTTTAGCGTTCTTGGCACACCT L L S S C - E N G - - G L F S V L G T P S F L R A K K M V S K G C L A F L A H L S P F F V L R K W L V R V V - R S W H T . . . . . . 1801 CCGAGATGATACTACCCAAGTACCTCCAATTGAGTCGGTTTCGGTAGTCCGTGAGTTTCT P R - Y Y P S T S N - V G F G S P - V S R D D T T Q V P P I E S V S V V R E F L S E M I L P K Y L Q L S R F R - S V S F . . . . . . 1861 GGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGCAT G C V P C R S S W Y A T R - G Y - L L H D V F P A D L P G M P P D R D I D F C I W M C S L Q I F L V C H Q I G I L T S A . . . . . . 1921 TGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAAAATGGCTCCCGCGGA - S - T G Y S P H F Y T P L - N G S R G D L E P G T R P I S I P P Y K M A P A E L I L N R V L A P F L Y P L I K W L P R . . . . . . 1981 GTTAAGAGAGTTAAAAGCTTAACTTCAAGAGTTGTTAAGCAAAGGCTTCATTAGACCAAG V K R V K S L T S R V V K Q R L H - T K L R E L K A - L Q E L L S K G F I R P S S - E S - K L N F K S C - A K A S L D Q . . . . . . 2041 TGCATCCCCTTGGGAAGCTCCAGTGTTATTTGTGAAGAAGAAGGATGGGAGTTTTCGGAT C I P L G S S S V I C E E E G W E F S D A S P W E A P V L F V K K K D G S F R M V H P L G K L Q C Y L - R R R M G V F G . . . . . . 2101 GTGCATAAACTACCGGCAGTTGAACAAGGTAACTATTAAGAACAAGTATCCCATTCCTCG V H K L P A V E Q G N Y - E Q V S H S S C I N Y R Q L N K V T I K N K Y P I P R C A - T T G S - T R - L L R T S I P F L . . . . . . 2161 CATTGATGACTTGTTCGATCAGTTACAAGGTGCTTGTGTCTTCTCTAAGATTGACTTGAG H - - L V R S V T R C L C L L - D - L E I D D L F D Q L Q G A C V F S K I D L R A L M T C S I S Y K V L V S S L R L T - . . . . . . 2221 GTTCGGTTATCATCAATTGAAGATACTGGCAATGGATGTGCCAAAAACTGCTTTTCGGAC V R L S S I E D T G N G C A K N C F S D F G Y H Q L K I L A M D V P K T A F R T G S V I I N - R Y W Q W M C Q K L L F G . . . . . . 2281 CAGGTATGGGCATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGC Q V W A L R I C S D V F W S Y E C P C C R Y G H Y E F V V M S F G L T N A P A A P G M G I T N L - - C L L V L R M P L L . . . . . . 2341 TTTCATGAGCTTGATGAACGGGATTTTTAAGCCATATCTGGATCTCTTTGTGATCGTATT F H E L D E R D F - A I S G S L C D R I F M S L M N G I F K P Y L D L F V I V F L S - A - - T G F L S H I W I S L - S Y . . . . . . 2401 TATTGATGATATATTGGTATACTCAAAGAGCAAGAAGGAACACGAGAAGCACTTGAGAAT Y - - Y I G I L K E Q E G T R E A L E N I D D I L V Y S K S K K E H E K H L R I L L M I Y W Y T Q R A R R N T R S T - E . . . . . . 2461 TGTATTGGAAATGTTGAGGGAGAAAAAGCTTTATGCCAAATTCTCCAAGTGTGAGTTTTG C I G N V E G E K A L C Q I L Q V - V L V L E M L R E K K L Y A K F S K C E F W L Y W K C - G R K S F M P N S P S V S F . . . . . . 2521 GCTAGATGCAGTGTCCTTCTTGGGGAATGTGGTTTCTAAGGATGAGGTGATGGTCTATCC A R C S V L L G E C G F - G - G D G L S L D A V S F L G N V V S K D E V M V Y P G - M Q C P S W G M W F L R M R - W S I . . . . . . 2581 TTCTAAGATTGAGACAGTAAAGAATTGGGTAAGACCTACTAATGTGTCAGAAATAAGGAG F - D - D S K E L G K T Y - C V R N K E S K I E T V K N W V R P T N V S E I R S L L R L R Q - R I G - D L L M C Q K - G . . . . . 2641 CTTTGTTGGTTTAGCTAGCTATTACCGTCGATTTGTCAAGGGATTC L C W F S - L L P S I C Q G I F V G L A S Y Y R R F V K G F A L L V - L A I T V D L S R D Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1+_PGL-1_AGS-1_PPS_1 (986 2002) (frame '2'; 1014 bp, 338 residues) 1 PIQSSLQTVV GGPPQTGQHF SERTMLESRK CYGCGETGHI KRYCPKQSYR PPNVRGRGGY 61 GRGRHSGGRG GRGNGGHQNG RGDGQTGATT SQHGRGNGQT GERAHCYAFP GRSEAETSDA 121 VITGNLLVCD CMASVLFDPG STFSYISSSF ANGHNLHCEL LDMPIRVSTP VGESVIVEKV 181 YRSGLVTFVG SNTYVDLVIL EMVDFDVILG MTWLSPNFAI LDCNAKTVTL AKPGTDPLVW 241 EGDYTSNPVR IISFLRAKKM VSKGCLAFLA HLRDDTTQVP PIESVSVVRE FLDVFPADLP 301 GMPPDRDIDF CIDLEPGTRP ISIPPYKMAP AELRELKA- >C04HBa0119A16.1+_PGL-1_AGS-1_PPS_2 (2 787) (frame '2'; 783 bp, 261 residues) 1 RGRGRTSSRG RGQAPVPSST RAVTPPPTKE VVREGEEGET EQVQNEELPP QPTPEMINQV 61 LTYLSGLSDQ GQTPPVFSAP APQALEVQHA ATMAPRMDAS LEIGTFPRLT TGPIMTNDQH 121 ELFSKFLKLK PPVFKGAESE DAYDFLVNYH ELLHKMGIVE RFGVEFVTYQ FQGNAKMWWR 181 SHVECQPTEA PPMTWASFSS LFMEKYIPRT LRDMKRDEFL SLEQGRMSVT AYEAKFRALS 241 RYATQLCFSL QERIHCFVKG L- >C04HBa0119A16.1+_PGL-1_AGS-1_PPS_3 (2003 2686) (frame '2'; 684 bp, 228 residues) 1 LQELLSKGFI RPSASPWEAP VLFVKKKDGS FRMCINYRQL NKVTIKNKYP IPRIDDLFDQ 61 LQGACVFSKI DLRFGYHQLK ILAMDVPKTA FRTRYGHYEF VVMSFGLTNA PAAFMSLMNG 121 IFKPYLDLFV IVFIDDILVY SKSKKEHEKH LRIVLEMLRE KKLYAKFSKC EFWLDAVSFL 181 GNVVSKDEVM VYPSKIETVK NWVRPTNVSE IRSFVGLASY YRRFVKGF >C04HBa0119A16.1+_PGL-1_AGS-1_PPS_4 (788 985) (frame '2'; 195 bp, 65 residues) 1 SELRISALQV ATTAKSFQKV VDFVIEVEEV KPDYFTMATT SKRFRKGGEF NGSYSRGQGS 61 GGYSV- AGS-2 (6685 5888,5844 5761,5693 5330,1505 1476,664 643) SCR (e 0.858 d 0.000 a 0.000,e 0.589 d 0.000 a 0.000,e 0.778 d 0.000 a 0.252,e 0.417 d 0.916 a 0.000,e 0.773) Exon 1 6685 5888 ( 798 n); score: 0.858 Intron 1 5887 5845 ( 43 n); Pd: 0.000 Pa: 0.000 Exon 2 5844 5761 ( 84 n); score: 0.589 Intron 2 5760 5694 ( 67 n); Pd: 0.000 Pa: 0.000 Exon 3 5693 5330 ( 364 n); score: 0.778 Intron 3 5329 1506 (3824 n); Pd: 0.000 Pa: 0.252 Exon 4 1505 1476 ( 30 n); score: 0.417 Intron 4 1475 665 ( 811 n); Pd: 0.916 Pa: 0.000 Exon 5 664 643 ( 22 n); score: 0.773 PGS (5700 5330,1505 1476,664 643) SGN-E578076- PGS (5990 5888,5844 5761,5693 5431) SGN-E347579- PGS (5693 5440) SGN-E357559- PGS (6371 5965) SGN-E246710- PGS (6220 5965) SGN-E357033+ PGS (6087 5965) SGN-E391780- PGS (6272 6038) SGN-E209683- PGS (6685 6198) SGN-E351546- PGS (6685 6198) SGN-E356206- PGS (6685 6198) SGN-E356696- PGS (6685 6278) SGN-E392027+ PGS (6685 6279) SGN-E542084+ PGS (6685 6279) SGN-E370357+ PGS (6535 6279) SGN-E336814- PGS (6345 6280) SGN-E550077- PGS (6345 6280) SGN-E389972- PGS (6345 6280) SGN-E228417- PGS (6345 6280) SGN-E550078+ PGS (6345 6280) SGN-E389445+ PGS (6544 6282) SGN-E373117- PGS (6535 6282) SGN-E373116+ PGS (6544 6326) SGN-E298638- PGS (6525 6356) SGN-E368629- PGS (6525 6356) SGN-E352844- PGS (6518 6356) SGN-E238551- 3-phase translation of AGS-2 (-strand): . . . . . . 6685 TGTCACGACCCAAATCGGGTCGTGACTGGCACTCACACTTACCCTCCTATGTGAGCGAAC C H D P N R V V T G T H T Y P P M - A N V T T Q I G S - L A L T L T L L C E R T S R P K S G R D W H S H L P S Y V S E . . . . . . 6625 CAACCAATCTAAACCTTAACATTTCAATATAATATCAACAGAAAGTAATGCGGAAGACTT Q P I - T L T F Q Y N I N R K - C G R L N Q S K P - H F N I I S T E S N A E D L P T N L N L N I S I - Y Q Q K V M R K T . . . . . . 6565 AAACTCATTAATAAAAACCAATTCAATAGCTTCTAAAAGCTCAACAACTATTATTATCCC K L I N K N Q F N S F - K L N N Y Y Y P N S L I K T N S I A S K S S T T I I I P - T H - - K P I Q - L L K A Q Q L L L S . . . . . . 6505 CAAAATCTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACTAATCTAAGAGTAT Q N L E V I I T R T S I L K L L I - E Y K I W K S S S Q E H L S S N Y - S K S I P K S G S H H H K N I Y P Q I T N L R V . . . . . . 6445 CTAAGAAGCTAAAATACATAAAAAGCTAGTCTATGCCGGAACTTCAAGGCATCAAGACAT L R S - N T - K A S L C R N F K A S R H - E A K I H K K L V Y A G T S R H Q D M S K K L K Y I K S - S M P E L Q G I K T . . . . . . 6385 GAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAAATCCGGAGTAATGA E E E D P V Q A R S I S S P - N P E - - K R K I Q S K L E A L A H P E I R S N E - R G R S S P S - K H - L T L K S G V M . . . . . . 6325 AGACTGGCTAGAGTTGCGGTTGAGTTGAAGACGACGGCACGTTTGCTGCACTCCACAATG R L A R V A V E L K T T A R L L H S T M D W L E L R L S - R R R H V C C T P Q - K T G - S C G - V E D D G T F A A L H N . . . . . . 6265 AACAAAAAGAAAACATACAAGTAGGGGTCACTACAAAACACAGGTACTGAGTAGGTATCA N K K K T Y K - G S L Q N T G T E - V S T K R K H T S R G H Y K T Q V L S R Y H E Q K E N I Q V G V T T K H R Y - V G I . . . . . . 6205 TCGGCCAACTCAAAATAGAAAACAGTATATATTAGATAACATCATAAAATCAACTATAAT S A N S K - K T V Y I R - H H K I N Y N R P T Q N R K Q Y I L D N I I K S T I I I G Q L K I E N S I Y - I T S - N Q L - . . . . . . 6145 ACTCAACATGCAGCATTTACAATTACCATAACCCTTGGTTACAACACCAAGCACATCAAT T Q H A A F T I T I T L G Y N T K H I N L N M Q H L Q L P - P L V T T P S T S M Y S T C S I Y N Y H N P W L Q H Q A H Q . . . . . . 6085 GAGGACTCACGCCTCCTCATCATACTCATTTGGGAATTAGGTTCATTAGATTGAATATAT E D S R L L I I L I W E L G S L D - I Y R T H A S S S Y S F G N - V H - I E Y I - G L T P P H H T H L G I R F I R L N I . . . . . . 6025 TAACATCTTTCAAGATTCATTATCTTTATTCCTCTCGTGTCGGTACGTGACACTCCGCTC - H L S R F I I F I P L V S V R D T P L N I F Q D S L S L F L S C R Y V T L R S L T S F K I H Y L Y S S R V G T - H S A . . . . . . 5965 CTCATGTACTATCCTAGTGTCAGAACGTGACACTCCGATCCTCATTCTATCCTGGTGTCA L M Y Y P S V R T - H S D P H S I L V S S C T I L V S E R D T P I L I L S W C Q P H V L S - C Q N V T L R S S F Y P G V . . : . . . . 5905 AAACGTGACACCCGATCC : TATCCTGGTGTCGGAACGTGACACTCCGATCCTCATATACTA K R D T R S : Y P G V G T - H S D P H I L N V T P D P : I L V S E R D T P I L I Y Y K T - H P I : L S W C R N V T L R S S Y T . . . . . : . 5802 TCCTGGTACCGGAACGTGGCACCCGATCCATATACTATCCTG : AATCTCACTACTTTAATT S W Y R N V A P D P Y T I L : N L T T L I P G T G T W H P I H I L S - : I S L L - F I L V P E R G T R S I Y Y P : E S H Y F N . . . . . . 5675 CATCAAGCCTTCTTTTATACCAAGGCATCATCATTAACAAAGTAGATTAGGATTTCTTTT H Q A F F Y T K A S S L T K - I R I S F I K P S F I P R H H H - Q S R L G F L F S S S L L L Y Q G I I I N K V D - D F F . . . . . . 5615 TCAAGATTTAGGATTCATAGCTTCATCATGCTTATTTTATCTCAATCATATAATCACAAC S R F R I H S F I M L I L S Q S Y N H N Q D L G F I A S S C L F Y L N H I I T T F K I - D S - L H H A Y F I S I I - S Q . . . . . . 5555 ATGCAAACACATAATTAAGCATATAGAAGGGTTTACAACACTACCCAATACATATCATTC M Q T H N - A Y R R V Y N T T Q Y I S F C K H I I K H I E G F T T L P N T Y H S H A N T - L S I - K G L Q H Y P I H I I . . . . . . 5495 TCTATTAAGAGTTTACTACGAATAGTATAAAAACCATAACCTACCTCCACCGAAGAATTT S I K S L L R I V - K P - P T S T E E F L L R V Y Y E - Y K N H N L P P P K N F L Y - E F T T N S I K T I T Y L H R R I . . . . . . 5435 TGATCCAGCAAGCAAATTTCCCAAGCTTTTGTTTTTCCTCTTCGTTCGTCTCTCTCTAGC - S S K Q I S Q A F V F P L R S S L S S D P A S K F P K L L F F L F V R L S L A L I Q Q A N F P S F C F S S S F V S L - . . . . . : . 5375 AATCATTTTTCCCTATCTTGTTCTTTCTATTTTTCTTATTCAAACC : ACTCACCCACCGGA N H F S L S C S F Y F S Y S N : H S P T G I I F P Y L V L S I F L I Q T : T H P P E Q S F F P I L F F L F F L F K P : L T H R . . : . . 1491 GTAGAAACACGAATAG : GCTCAAAAATTCATCTCTTTTC V E T R I : G S K I H L F - K H E - : A Q K F I S F S R N T N R : L K N S S L F Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-2_PPS_1 (6036 5888,5844 5761,5693 5693) (frame '2'; 231 bp, 77 residues) 1 IEYINIFQDS LSLFLSCRYV TLRSSCTILV SERDTPILIL SWCQNVTPDP ILVSERDTPI 61 LIYYPGTGTW HPIHILS- AGS-3 (2064 1601,856 670) SCR (e 0.905 d 0.000 a 0.000,e 0.861) Exon 1 2064 1601 ( 464 n); score: 0.905 Intron 1 1600 857 ( 744 n); Pd: 0.000 Pa: 0.000 Exon 2 856 670 ( 187 n); score: 0.861 PGS (2064 1601,856 670) SGN-E353359+ 3-phase translation of AGS-3 (-strand): . . . . . . 2064 ACTGGAGCTTCCCAAGGGGATGCACTTGGTCTAATGAAGCCTTTGCTTAACAACTCTTGA T G A S Q G D A L G L M K P L L N N S - L E L P K G M H L V - - S L C L T T L E W S F P R G C T W S N E A F A - Q L L . . . . . . 2004 AGTTAAGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTTTATAAGGGGGTATAGAAATG S - A F N S L N S A G A I L - G G I E M V K L L T L L T P R E P F Y K G V - K W K L S F - L S - L R G S H F I R G Y R N . . . . . . 1944 GGGCGAGTACCCGGTTCAAGATCAATGCAGAAGTCAATATCCCTATCTGGTGGCATACCA G R V P G S R S M Q K S I S L S G G I P G E Y P V Q D Q C R S Q Y P Y L V A Y Q G A S T R F K I N A E V N I P I W W H T . . . . . . 1884 GGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACTACCGAAACCGACTCAATTGGA G R S A G N T S R N S R T T E T D S I G E D L Q G T H P E T H G L P K P T Q L E R K I C R E H I Q K L T D Y R N R L N W . . . . . . 1824 GGTACTTGGGTAGTATCATCTCGGAGGTGTGCCAAGAACGCTAAACAACCCTTACTAACC G T W V V S S R R C A K N A K Q P L L T V L G - Y H L G G V P R T L N N P Y - P R Y L G S I I S E V C Q E R - T T L T N . . . . . . 1764 ATTTTCTTAGCACGAAGAAAGGAGATAATACGAACCGGATTGGAAGTGTAGTCACCCTCC I F L A R R K E I I R T G L E V - S P S F S - H E E R R - Y E P D W K C S H P P H F L S T K K G D N T N R I G S V V T L . . . . . . 1704 CACACTAATGGATCTGTACCAGGCTTGGCTAACGTCACGGTTTTAGCATTGCAATCCAAG H T N G S V P G L A N V T V L A L Q S K T L M D L Y Q A W L T S R F - H C N P R P H - W I C T R L G - R H G F S I A I Q . . . . . : . 1644 ATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAGAATTACATC : GAAGTCTACCACTTTT I A K F G E S Q V I P R I T S : K S T T F S Q N S E K A K S Y P E L H : R S L P L F D R K I R R K P S H T Q N Y I : E V Y H F . . . . . . 840 TGAAAAGATTTCGCTGTAGTTGCTACCTGTAAGGCTGAAATCCGCAACTCTGATCACAAC - K D F A V V A T C K A E I R N S D H N E K I S L - L L P V R L K S A T L I T T L K R F R C S C Y L - G - N P Q L - S Q . . . . . . 780 CCCTTCACAAAACAGTGAATCCGCTCTTGTAGACTGAAACATAGTTGGGTGGCATACCGG P F T K Q - I R S C R L K H S W V A Y R P S Q N S E S A L V D - N I V G W H T G P L H K T V N P L L - T E T - L G G I P . . . . . . 720 GATAATGCACGAAACTTAGCCTCATATGCAGTAACCGACATCCTACCTTGC D N A R N L A S Y A V T D I L P C I M H E T - P H M Q - P T S Y L G - C T K L S L I C S N R H P T L Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-3_PPS_1 (1959 1714) (frame '1'; 243 bp, 81 residues) 1 GGIEMGRVPG SRSMQKSISL SGGIPGRSAG NTSRNSRTTE TDSIGGTWVV SSRRCAKNAK 61 QPLLTIFLAR RKEIIRTGLE V- AGS-4 (1505 1476,1440 910) SCR (e 0.633 d 0.916 a 0.000,e 0.887) Exon 1 1505 1476 ( 30 n); score: 0.633 Intron 1 1475 1441 ( 35 n); Pd: 0.916 Pa: 0.000 Exon 2 1440 910 ( 531 n); score: 0.887 PGS (1505 1476,1440 910) SGN-E577713+ 3-phase translation of AGS-4 (-strand): . . . : . . . 1505 ACTCACCCACCGGAGTAGAAACACGAATAG : TTAGCAAATGAGGAAGATATATAAGAAAAT T H P P E - K H E - : L A N E E D I - E N L T H R S R N T N S : - Q M R K I Y K K M S P T G V E T R I : V S K - G R Y I R K . . . . . . 1410 GTGGATCCAGGGTCAAATAATACAGAAGCCATACAATCACAAACCAAAAGATTACCTGTG V D P G S N N T E A I Q S Q T K R L P V W I Q G Q I I Q K P Y N H K P K D Y L - C G S R V K - Y R S H T I T N Q K I T C . . . . . . 1350 ATAACAGCATCTGATGTCTCCGCTTCCGACCGCCCAGGGAAAGCGTAACAATGGGCCCTC I T A S D V S A S D R P G K A - Q W A L - Q H L M S P L P T A Q G K R N N G P S D N S I - C L R F R P P R E S V T M G P . . . . . . 1290 TCACCTGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCA S P V C P L P L P C C D V V A P V C P S H L S V R C P Y H V V M - W L Q F A H H L T C L S V A P T M L - C S G S S L P I . . . . . . 1230 CCCCGGCCGTTTTGGTGACCACCATTACCTCGACCACCGCGTCCTCCAGAATGACGGCCT P R P F W - P P L P R P P R P P E - R P P G R F G D H H Y L D H R V L Q N D G L T P A V L V T T I T S T T A S S R M T A . . . . . . 1170 CTTCCATAACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATAC L P - P P L P L T F G G L - L C F G Q Y F H N H L Y L - H L E V C N S V L D N T S S I T T S T S N I W R S V T L F W T I . . . . . . 1110 CTCTTAATGTGTCCAGTCTCCCCACATCCATAACACTTTCTGGATTCAAGCATAGTTCTC L L M C P V S P H P - H F L D S S I V L S - C V Q S P H I H N T F W I Q A - F S P L N V S S L P T S I T L S G F K H S S . . . . . . 1050 TCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGA S E K C - P V - G G P P T T V C S E D - Q R S V D R S E V D P Q L Q S V V K T E L R E V L T G L R W T P N Y S L - - R L . . . . . . 990 ATTGGTCAGACTGAGTAACCTCCTGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCA I G Q T E - P P E P C P L E - E P L N S L V R L S N L L N P V L - S K N H - T H N W S D - V T S - T L S S R V R T I K L . . . 930 CCTCCCTTTCGAAACCTTTTT P P F R N L F L P F E T F T S L S K P F Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-4_PPS_1 (1255 1001) (frame '0'; 252 bp, 84 residues) 1 CSGSSLPITP AVLVTTITST TASSRMTASS ITTSTSNIWR SVTLFWTIPL NVSSLPTSIT 61 LSGFKHSSLR EVLTGLRWTP NYSL- AGS-5 (3945 2914) SCR (e 0.877) Exon 1 3945 2914 (1032 n); score: 0.877 PGS (3498 2914) SGN-E352950+ PGS (3498 2914) SGN-E357100+ PGS (3498 2947) SGN-E352647+ PGS (3945 3404) SGN-E353207+ PGS (3915 3616) SGN-E578131+ 3-phase translation of AGS-5 (-strand): . . . . . . 3945 TCAGCATGCAATGTTCTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATG S A C N V L Q N L E V N C V P L S D M M Q H A M F S K T - K - T A Y L Y L I - W S M Q C S P K L R S K L R T S I - Y D . . . . . . 3885 GAGAGTGGAACTCCATGCAATCGAACAATTTCTGAGATGTAAATTTTGGCTAACTTCTCT E S G T P C N R T I S E M - I L A N F S R V E L H A I E Q F L R C K F W L T S L G E W N S M Q S N N F - D V N F G - L L . . . . . . 3825 GCATTATAAGTCACCTTGACCGGAATGAAGTGAGCAGACTTCGTTAACCTATCGACAATC A L - V T L T G M K - A D F V N L S T I H Y K S P - P E - S E Q T S L T Y R Q S C I I S H L D R N E V S R L R - P I D N . . . . . . 3765 ACCCAAATGGAGTCATACTTACTCATTGTCTTTTGAAGACCAACCACGAAGTCCATTGCA T Q M E S Y L L I V F - R P T T K S I A P K W S H T Y S L S F E D Q P R S P L Q H P N G V I L T H C L L K T N H E V H C . . . . . . 3705 ATTCTCTCCCACATCCATTTAGGAATGGGCATTCTCTGAAGTGTTCCTCTAGGCCTCTGG I L S H I H L G M G I L - S V P L G L W F S P T S I - E W A F S E V F L - A S G N S L P H P F R N G H S L K C S S R P L . . . . . . 3645 TGTTCATACTTTACTTGCTTACAATTTGGACATTTGGCAACAAAATCAACAATGTCGCGC C S Y F T C L Q F G H L A T K S T M S R V H T L L A Y N L D I W Q Q N Q Q C R A V F I L Y L L T I W T F G N K I N N V A . . . . . . 3585 TTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGGTACATCTTGGTTGCACCAGGA F I L L H Q K C C F R S R Y I L V A P G S F Y S T K S V A L G H G T S W L H Q D L H S T P P K V L L - V T V H L G C T R . . . . . . 3525 TGTATAGAGTACCTTGAACTATGAGCTTCTGCCAGAATAGTGTTTATCAAATCATCAACG C I E Y L E L - A S A R I V F I K S S T V - S T L N Y E L L P E - C L S N H Q R M Y R V P - T M S F C Q N S V Y Q I I N . . . . . . 3465 CGGGGTACACATACCCTTCCCTTGATTCTCAAAACACCTTCCTCATCGATTTGCGCTTCC R G T H T L P L I L K T P S S S I C A S G V H I P F P - F S K H L P H R F A L P A G Y T Y P S L D S Q N T F L I D L R F . . . . . . 3405 TTAGCCTCTCCTCGCAATACTTTATCTTGGATTCTGCTTAGTTTCTCATCATCAAACTAT L A S P R N T L S W I L L S F S S S N Y - P L L A I L Y L G F C L V S H H Q T I L S L S S Q Y F I L D S A - F L I I K L . . . . . . 3345 TTTCCCTTAATCTTGTCAAGAAAAGAAGATCTTGCCTCCACACAAGCCAACAATCCTCCC F P L I L S R K E D L A S T Q A N N P P F P - S C Q E K K I L P P H K P T I L P F S L N L V K K R R S C L H T S Q Q S S . . . . . . 3285 TTCTCATTTACTTCTAACCTCATCAAGTCGTTAGCCAGAGTCTGAACCTCTCTAGCCAAT F S F T S N L I K S L A R V - T S L A N S H L L L T S S S R - P E S E P L - P M L L I Y F - P H Q V V S Q S L N L S S Q . . . . . . 3225 GGACGTCTAGAAACTTGCAAGTGAGCCAGGCTTCCCATGCTTCTTGCCTTTCTACTTAAG G R L E T C K - A R L P M L L A F L L K D V - K L A S E P G F P C F L P F Y L R W T S R N L Q V S Q A S H A S C L S T - . . . . . . 3165 GTGTCTGCCACAACATTAGCCTTTCCCGGATGATACAAGATAGTGATATCGTAGTCCTTC V S A T T L A F P G - Y K I V I S - S F C L P Q H - P F P D D T R - - Y R S P S G V C H N I S L S R M I Q D S D I V V L . . . . . . 3105 AGTAGTTCCATCCATCTCCTCTGTCTCAAATTCAAATCTTTTTGAGTAAACACATACTGT S S S I H L L C L K F K S F - V N T Y C V V P S I S S V S N S N L F E - T H T V Q - F H P S P L S Q I Q I F L S K H I L . . . . . . 3045 AGGCTACGATGATCCGTGTATACTTCACACTTAACCCCATATAGATAGTACCTCCATTGC R L R - S V Y T S H L T P Y R - Y L H C G Y D D P C I L H T - P H I D S T S I A - A T M I R V Y F T L N P I - I V P P L . . . . . . 2985 TTTAAGGCAAACACTACCGCAGCTAATTCCAAATCATGGGTCGGATAATTACCTTCGTGC F K A N T T A A N S K S W V G - L P S C L R Q T L P Q L I P N H G S D N Y L R A L - G K H Y R S - F Q I M G R I I T F V . . 2925 ACATTTAATTGC T F N C H L I H I - L Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-5_PPS_1 (3501 3241) (frame '1'; 258 bp, 86 residues) 1 ASARIVFIKS STRGTHTLPL ILKTPSSSIC ASLASPRNTL SWILLSFSSS NYFPLILSRK 61 EDLASTQANN PPFSFTSNLI KSLARV- >C04HBa0119A16.1-_PGL-1_AGS-5_PPS_2 (3778 3554) (frame '0'; 222 bp, 74 residues) 1 PIDNHPNGVI LTHCLLKTNH EVHCNSLPHP FRNGHSLKCS SRPLVFILYL LTIWTFGNKI 61 NNVALHSTPP KVLL- 3-phase translation of AGS-5 (+strand): . . . . . . 2914 GCAATTAAATGTGCACGAAGGTAATTATCCGACCCATGATTTGGAATTAGCTGCGGTAGT A I K C A R R - L S D P - F G I S C G S Q L N V H E G N Y P T H D L E L A A V V N - M C T K V I I R P M I W N - L R - . . . . . . 2974 GTTTGCCTTAAAGCAATGGAGGTACTATCTATATGGGGTTAAGTGTGAAGTATACACGGA V C L K A M E V L S I W G - V - S I H G F A L K Q W R Y Y L Y G V K C E V Y T D C L P - S N G G T I Y M G L S V K Y T R . . . . . . 3034 TCATCGTAGCCTACAGTATGTGTTTACTCAAAAAGATTTGAATTTGAGACAGAGGAGATG S S - P T V C V Y S K R F E F E T E E M H R S L Q Y V F T Q K D L N L R Q R R W I I V A Y S M C L L K K I - I - D R G D . . . . . . 3094 GATGGAACTACTGAAGGACTACGATATCACTATCTTGTATCATCCGGGAAAGGCTAATGT D G T T E G L R Y H Y L V S S G K G - C M E L L K D Y D I T I L Y H P G K A N V G W N Y - R T T I S L S C I I R E R L M . . . . . . 3154 TGTGGCAGACACCTTAAGTAGAAAGGCAAGAAGCATGGGAAGCCTGGCTCACTTGCAAGT C G R H L K - K G K K H G K P G S L A S V A D T L S R K A R S M G S L A H L Q V L W Q T P - V E R Q E A W E A W L T C K . . . . . . 3214 TTCTAGACGTCCATTGGCTAGAGAGGTTCAGACTCTGGCTAACGACTTGATGAGGTTAGA F - T S I G - R G S D S G - R L D E V R S R R P L A R E V Q T L A N D L M R L E F L D V H W L E R F R L W L T T - - G - . . . . . . 3274 AGTAAATGAGAAGGGAGGATTGTTGGCTTGTGTGGAGGCAAGATCTTCTTTTCTTGACAA S K - E G R I V G L C G G K I F F S - Q V N E K G G L L A C V E A R S S F L D K K - M R R E D C W L V W R Q D L L F L T . . . . . . 3334 GATTAAGGGAAAATAGTTTGATGATGAGAAACTAAGCAGAATCCAAGATAAAGTATTGCG D - G K I V - - - E T K Q N P R - S I A I K G K - F D D E K L S R I Q D K V L R R L R E N S L M M R N - A E S K I K Y C . . . . . . 3394 AGGAGAGGCTAAGGAAGCGCAAATCGATGAGGAAGGTGTTTTGAGAATCAAGGGAAGGGT R R G - G S A N R - G R C F E N Q G K G G E A K E A Q I D E E G V L R I K G R V E E R L R K R K S M R K V F - E S R E G . . . . . . 3454 ATGTGTACCCCGCGTTGATGATTTGATAAACACTATTCTGGCAGAAGCTCATAGTTCAAG M C T P R - - F D K H Y S G R S S - F K C V P R V D D L I N T I L A E A H S S R Y V Y P A L M I - - T L F W Q K L I V Q . . . . . . 3514 GTACTCTATACATCCTGGTGCAACCAAGATGTACCGTGACCTAAAGCAACACTTTTGGTG V L Y T S W C N Q D V P - P K A T L L V Y S I H P G A T K M Y R D L K Q H F W W G T L Y I L V Q P R C T V T - S N T F G . . . . . . 3574 GAGTAGAATGAAGCGCGACATTGTTGATTTTGTTGCCAAATGTCCAAATTGTAAGCAAGT E - N E A R H C - F C C Q M S K L - A S S R M K R D I V D F V A K C P N C K Q V G V E - S A T L L I L L P N V Q I V S K . . . . . . 3634 AAAGTATGAACACCAGAGGCCTAGAGGAACACTTCAGAGAATGCCCATTCCTAAATGGAT K V - T P E A - R N T S E N A H S - M D K Y E H Q R P R G T L Q R M P I P K W M - S M N T R G L E E H F R E C P F L N G . . . . . . 3694 GTGGGAGAGAATTGCAATGGACTTCGTGGTTGGTCTTCAAAAGACAATGAGTAAGTATGA V G E N C N G L R G W S S K D N E - V - W E R I A M D F V V G L Q K T M S K Y D C G R E L Q W T S W L V F K R Q - V S M . . . . . . 3754 CTCCATTTGGGTGATTGTCGATAGGTTAACGAAGTCTGCTCACTTCATTCCGGTCAAGGT L H L G D C R - V N E V C S L H S G Q G S I W V I V D R L T K S A H F I P V K V T P F G - L S I G - R S L L T S F R S R . . . . . . 3814 GACTTATAATGCAGAGAAGTTAGCCAAAATTTACATCTCAGAAATTGTTCGATTGCATGG D L - C R E V S Q N L H L R N C S I A W T Y N A E K L A K I Y I S E I V R L H G - L I M Q R S - P K F T S Q K L F D C M . . . . . . 3874 AGTTCCACTCTCCATCATATCAGATAGAGGTACGCAGTTTACTTCTAAGTTTTGGAGAAC S S T L H H I R - R Y A V Y F - V L E N V P L S I I S D R G T Q F T S K F W R T E F H S P S Y Q I E V R S L L L S F G E . . 3934 ATTGCATGCTGA I A C - L H A H C M L Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1+_PGL-1_AGS-5_PPS_1 (3350 3943) (frame '2'; 594 bp, 198 residues) 1 FDDEKLSRIQ DKVLRGEAKE AQIDEEGVLR IKGRVCVPRV DDLINTILAE AHSSRYSIHP 61 GATKMYRDLK QHFWWSRMKR DIVDFVAKCP NCKQVKYEHQ RPRGTLQRMP IPKWMWERIA 121 MDFVVGLQKT MSKYDSIWVI VDRLTKSAHF IPVKVTYNAE KLAKIYISEI VRLHGVPLSI 181 ISDRGTQFTS KFWRTLHA >C04HBa0119A16.1+_PGL-1_AGS-5_PPS_2 (2915 3349) (frame '2'; 432 bp, 144 residues) 1 QLNVHEGNYP THDLELAAVV FALKQWRYYL YGVKCEVYTD HRSLQYVFTQ KDLNLRQRRW 61 MELLKDYDIT ILYHPGKANV VADTLSRKAR SMGSLAHLQV SRRPLAREVQ TLANDLMRLE 121 VNEKGGLLAC VEARSSFLDK IKGK- AGS-6 (6182 5838,5797 4229) SCR (e 0.871 d 0.000 a 0.000,e 0.942) Exon 1 6182 5838 ( 345 n); score: 0.871 Intron 1 5837 5798 ( 40 n); Pd: 0.000 Pa: 0.000 Exon 2 5797 4229 (1569 n); score: 0.942 PGS (4989 4229) SGN-E354383- PGS (5133 4571) SGN-E252199- PGS (5357 4825) SGN-E389553- PGS (5357 4825) SGN-E389834+ PGS (5357 4825) SGN-E550065+ PGS (5357 4825) SGN-E550322+ PGS (5357 4825) SGN-E550201+ PGS (5357 4825) SGN-E550207+ PGS (5357 4825) SGN-E550335+ PGS (5357 4825) SGN-E390013+ PGS (5357 4825) SGN-E550484+ PGS (5357 4825) SGN-E550211+ PGS (5357 4825) SGN-E550464+ PGS (5357 4825) SGN-E549941+ PGS (5357 4825) SGN-E550025+ PGS (5357 4825) SGN-E231589+ PGS (5357 4825) SGN-E374999+ PGS (5357 4825) SGN-E396039+ PGS (5357 4825) SGN-E396054+ PGS (5357 4825) SGN-E396056+ PGS (5357 4825) SGN-E396058+ PGS (5357 4825) SGN-E377133+ PGS (5357 4825) SGN-E550140- PGS (5357 4825) SGN-E550212+ PGS (5346 4825) SGN-E550127- PGS (5328 4825) SGN-E377132- PGS (5312 4825) SGN-E396055- PGS (5310 4825) SGN-E398551- PGS (5300 4825) SGN-E396038- PGS (5194 4825) SGN-E396069- PGS (5190 4825) SGN-E374998- PGS (5357 4835) SGN-E241959+ PGS (5519 4871) SGN-E349296- PGS (5357 4907) SGN-E236652+ PGS (5742 5440) SGN-E349726- PGS (6182 5838,5797 5625) SGN-E242359- 3-phase translation of AGS-6 (-strand): . . . . . . 6182 AGTATATATTAGATAACATCATAAAATCAACTATAATACTCAACATGCAGCATTTACAAT S I Y - I T S - N Q L - Y S T C S I Y N V Y I R - H H K I N Y N T Q H A A F T I Y I L D N I I K S T I I L N M Q H L Q . . . . . . 6122 TACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACGCCTCCTCATCAT Y H N P W L Q H Q A H Q - G L T P P H H T I T L G Y N T K H I N E D S R L L I I L P - P L V T T P S T S M R T H A S S S . . . . . . 6062 ACTCATTTGGGAATTAGGTTCATTAGATTGAATATATTAACATCTTTCAAGATTCATTAT T H L G I R F I R L N I L T S F K I H Y L I W E L G S L D - I Y - H L S R F I I Y S F G N - V H - I E Y I N I F Q D S L . . . . . . 6002 CTTTATTCCTCTCGTGTCGGTACGTGACACTCCGCTCCTCATGTACTATCCTAGTGTCAG L Y S S R V G T - H S A P H V L S - C Q F I P L V S V R D T P L L M Y Y P S V R S L F L S C R Y V T L R S S C T I L V S . . . . . . 5942 AACGTGACACTCCGATCCTCATTCTATCCTGGTGTCAAAACGTGACACCCGATCCATATT N V T L R S S F Y P G V K T - H P I H I T - H S D P H S I L V S K R D T R S I F E R D T P I L I L S W C Q N V T P D P Y . . . . . : . 5882 CTATCCTGGTACCGGAACGTGGCACCCGATCCATATACTATCCTG : GTACCGGAACGTGGC L S W Y R N V A P D P Y T I L : V P E R G Y P G T G T W H P I H I L S W : Y R N V A S I L V P E R G T R S I Y Y P : G T G T W . . . . . . 5782 ACCCGATCCATATACTATCCTGGTGTCGGAATGTGACACTCCGATCCTCATATACTATCC T R S I Y Y P G V G M - H S D P H I L S P D P Y T I L V S E C D T P I L I Y Y P H P I H I L S W C R N V T L R S S Y T I . . . . . . 5722 TGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACTACTTTAATTCATCAAGCCTTCT W Y R N V A P D P L I S L L - F I K P S G T G T W H P I P - S H Y F N S S S L L L V P E R G T R S P N L T T L I H Q A F . . . . . . 5662 TTTATACCAAGGCATCATCATTAACAAAGTAGATTAGGATTTCTTTTTCAAGATTTAGGA F I P R H H H - Q S R L G F L F Q D L G L Y Q G I I I N K V D - D F F F K I - D F Y T K A S S L T K - I R I S F S R F R . . . . . . 5602 TTCATAGCTTCATCATGCTTATTTTATCTCAATCATATAATCACAACATGCAAACACATA F I A S S C L F Y L N H I I T T C K H I S - L H H A Y F I S I I - S Q H A N T - I H S F I M L I L S Q S Y N H N M Q T H . . . . . . 5542 ATTAAGCATATAGAAGGGTTTACAACACTACCCAATACATATCATTCTCTATTAAGAGTT I K H I E G F T T L P N T Y H S L L R V L S I - K G L Q H Y P I H I I L Y - E F N - A Y R R V Y N T T Q Y I S F S I K S . . . . . . 5482 TACTACGAATAGTATAAAAACCATAACCTACCTCCACCGAAGAATTTTGATCCAGCAAGC Y Y E - Y K N H N L P P P K N F D P A S T T N S I K T I T Y L H R R I L I Q Q A L L R I V - K P - P T S T E E F - S S K . . . . . . 5422 AAATTTCCCAAGCTTTTGTTTTTCCTCTTCGTTCGTCTCTCTCTAGCAATCATTTTTCCC K F P K L L F F L F V R L S L A I I F P N F P S F C F S S S F V S L - Q S F F P Q I S Q A F V F P L R S S L S S N H F S . . . . . . 5362 TATCTTGTTCTTTCTATTTTTCTTATTCAAACCATCTTTCTTTTACCCTAATTAGCATAT Y L V L S I F L I Q T I F L L P - L A Y I L F F L F F L F K P S F F Y P N - H I L S C S F Y F S Y S N H L S F T L I S I . . . . . . 5302 AATTAAGTATAAAAGATGAGGACTTAACCCACTAATTAACTCAAGGTTACCTCTTTTAAC N - V - K M R T - P T N - L K V T S F N I K Y K R - G L N P L I N S R L P L L T - L S I K D E D L T H - L T Q G Y L F - . . . . . . 5242 CCCCAAGTAATTGAGTTATTAATATTAAACCACTAACTTTATAATTATAGCAGGAATAGT P Q V I E L L I L N H - L Y N Y S R N S P K - L S Y - Y - T T N F I I I A G I V P P S N - V I N I K P L T L - L - Q E - . . . . . . 5182 CCAAAACGTCCCTTAAAATATTTAAAGAAATCCGACCTCGCTTGGGATTACGCAGCCTGT P K R P L K Y L K K S D L A W D Y A A C Q N V P - N I - R N P T S L G I T Q P V S K T S L K I F K E I R P R L G L R S L . . . . . . 5122 GACGGGCCGTCGTGCCTGCGACGGTCTGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTC D G P S C L R R S V L L L R H R V Q R L T G R R A C D G L S C C S V T E F R D S - R A V V P A T V C P A A P S Q S S E T . . . . . . 5062 ACTTTTTATTTAAGACCCTGTGACGGCCCGTCATGCCTGTGACGGTCCATCCTGCACTTT T F Y L R P C D G P S C L - R S I L H F L F I - D P V T A R H A C D G P S C T F H F L F K T L - R P V M P V T V H P A L . . . . . . 5002 TGTCACGAAGTTCAGAGAGTTGATTTCAGTACCCAAATTTCAGAATTTCTAAGTGTTTTG C H E V Q R V D F S T Q I S E F L S V L V T K F R E L I S V P K F Q N F - V F - L S R S S E S - F Q Y P N F R I S K C F . . . . . . 4942 AAACGAGACCCCCTTGACGGTCCGTTGTGCCCATGACGGTCCGTCGTGGGATCCGTCGTC K R D P L D G P L C P - R S V V G S V V N E T P L T V R C A H D G P S W D P S S E T R P P - R S V V P M T V R R G I R R . . . . . . 4882 TCAGCCAGTTTTCCAGAAATAACATCTGTTGCTCAAAACGACTAAACAGGTCGTTACAAT S A S F P E I T S V A Q N D - T G R Y N Q P V F Q K - H L L L K T T K Q V V T I L S Q F S R N N I C C S K R L N R S L Q . . . . . . 4822 AGATACCAATTTACCCATTGTTCGTCCTCGAACGATCATAAGAAGAAAACAAGGGCGAAA R Y Q F T H C S S S N D H K K K T R A K D T N L P I V R P R T I I R R K Q G R K - I P I Y P L F V L E R S - E E N K G E . . . . . . 4762 AGAAGTACCTGAATCTGTAAACAGGTGGGGGTATCTTTCTTGCATATCAACCTCTTTCTC R S T - I C K Q V G V S F L H I N L F L E V P E S V N R W G Y L S C I S T S F S K K Y L N L - T G G G I F L A Y Q P L S . . . . . . 4702 CCAAGTGGCTTCTTCAACGGGTCGATTCTTCCATTGAACTTTGATGGATGCAATCTCCCT P S G F F N G S I L P L N F D G C N L P Q V A S S T G R F F H - T L M D A I S L P K W L L Q R V D S S I E L - W M Q S P . . . . . . 4642 TGACCTCAGCTTGCGAACTTCTCTATCTAAAATAGCAACAGACTCCTCCTCATAAGACAA - P Q L A N F S I - N S N R L L L I R Q D L S L R T S L S K I A T D S S S - D K L T S A C E L L Y L K - Q Q T P P H K T . . . . . . 4582 ATTTTCATCAAGCAGCACTAAATCCCAACGAATGATGTAGTTTCCATCCCCATGGTATCT I F I K Q H - I P T N D V V S I P M V S F S S S S T K S Q R M M - F P S P W Y L N F H Q A A L N P N E - C S F H P H G I . . . . . . 4522 TTTTCACATAGACACATGAAATACCGGATGCACTCCGTACAGTCCCGGAGGCAAGGCTAA F S H R H M K Y R M H S V Q S R R Q G - F H I D T - N T G C T P Y S P G G K A N F F T - T H E I P D A L R T V P E A R L . . . . . . 4462 CTCATAAGCCACCTCTCCTATGCGCTTCAAAACTTCAAATGGACCAATATACCTCGGACT L I S H L S Y A L Q N F K W T N I P R T S - A T S P M R F K T S N G P I Y L G L T H K P P L L C A S K L Q M D Q Y T S D . . . . . . 4402 AAGTTTACCTGGCTTACCAAACAACATCACCCCTTTCATGGGCGAAACCTTCAACAAGAC K F T W L T K Q H H P F H G R N L Q Q D S L P G L P N N I T P F M G E T F N K T - V Y L A Y Q T T S P L S W A K P S T R . . . . . . 4342 TTGTTCACACTCCATAAACTCCAAGTCTCTAACCTTTCGAACGACATATTCCTTTTGCCT L F T L H K L Q V S N L S N D I F L L P C S H S I N S K S L T F R T T Y S F C L L V H T P - T P S L - P F E R H I P F A . . . . . . 4282 ACTTTGCGCCGCCAAAAGCTTTTCTTGAATACATTTCACCTTCTCCAATGAATC T L R R Q K L F L N T F H L L Q - I L C A A K S F S - I H F T F S N E Y F A P P K A F L E Y I S P S P M N Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-6_PPS_1 (6036 5838,5797 5631) (frame '0'; 363 bp, 121 residues) 1 IEYINIFQDS LSLFLSCRYV TLRSSCTILV SERDTPILIL SWCQNVTPDP YSILVPERGT 61 RSIYYPGTGT WHPIHILSWC RNVTLRSSYT ILVPERGTRS PNLTTLIHQA FFYTKASSLT 121 K- >C04HBa0119A16.1-_PGL-1_AGS-6_PPS_2 (4462 4232) (frame '1'; 228 bp, 76 residues) 1 LISHLSYALQ NFKWTNIPRT KFTWLTKQHH PFHGRNLQQD LFTLHKLQVS NLSNDIFLLP 61 TLRRQKLFLN TFHLLQ- >C04HBa0119A16.1-_PGL-1_AGS-6_PPS_3 (4860 4666) (frame '2'; 192 bp, 64 residues) 1 HLLLKTTKQV VTIDTNLPIV RPRTIIRRKQ GRKEVPESVN RWGYLSCIST SFSQVASSTG 61 RFFH- AGS-7 (6413 5948,5870 5636) SCR (e 0.821 d 0.000 a 0.000,e 0.762) Exon 1 6413 5948 ( 466 n); score: 0.821 Intron 1 5947 5871 ( 77 n); Pd: 0.000 Pa: 0.000 Exon 2 5870 5636 ( 235 n); score: 0.762 PGS (6413 5948,5870 5636) SGN-E241789+ PGS (5875 5732) SGN-E546548- 3-phase translation of AGS-7 (-strand): . . . . . . 6413 ATGCCGGAACTTCAAGGCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCAT M P E L Q G I K T - R G R S S P S - K H C R N F K A S R H E E E D P V Q A R S I A G T S R H Q D M K R K I Q S K L E A . . . . . . 6353 TAGCTCACCCTGAAATCCGGAGTAATGAAGACTGGCTAGAGTTGCGGTTGAGTTGAAGAC - L T L K S G V M K T G - S C G - V E D S S P - N P E - - R L A R V A V E L K T L A H P E I R S N E D W L E L R L S - R . . . . . . 6293 GACGGCACGTTTGCTGCACTCCACAATGAACAAAAAGAAAACATACAAGTAGGGGTCACT D G T F A A L H N E Q K E N I Q V G V T T A R L L H S T M N K K K T Y K - G S L R R H V C C T P Q - T K R K H T S R G H . . . . . . 6233 ACAAAACACAGGTACTGAGTAGGTATCATCGGCCAACTCAAAATAGAAAACAGTATATAT T K H R Y - V G I I G Q L K I E N S I Y Q N T G T E - V S S A N S K - K T V Y I Y K T Q V L S R Y H R P T Q N R K Q Y I . . . . . . 6173 TAGATAACATCATAAAATCAACTATAATACTCAACATGCAGCATTTACAATTACCATAAC - I T S - N Q L - Y S T C S I Y N Y H N R - H H K I N Y N T Q H A A F T I T I T L D N I I K S T I I L N M Q H L Q L P - . . . . . . 6113 CCTTGGTTACAACACCAAGCACATCAATGAGGACTCACGCCTCCTCATCATACTCATTTG P W L Q H Q A H Q - G L T P P H H T H L L G Y N T K H I N E D S R L L I I L I W P L V T T P S T S M R T H A S S S Y S F . . . . . . 6053 GGAATTAGGTTCATTAGATTGAATATATTAACATCTTTCAAGATTCATTATCTTTATTCC G I R F I R L N I L T S F K I H Y L Y S E L G S L D - I Y - H L S R F I I F I P G N - V H - I E Y I N I F Q D S L S L F . . . . . : . 5993 TCTCGTGTCGGTACGTGACACTCCGCTCCTCATGTACTATCCTAGT : CGGAACGTGGCACC S R V G T - H S A P H V L S - : S E R G T L V S V R D T P L L M Y Y P S : R N V A P L S C R Y V T L R S S C T I L V : G T W H . . . . . . 5856 CGATCCATATACTATCCTGGTGTCGGAACGTGACACTCCGATCCTCATATACTATCCTGG R S I Y Y P G V G T - H S D P H I L S W D P Y T I L V S E R D T P I L I Y Y P G P I H I L S W C R N V T L R S S Y T I L . . . . . . 5796 TACCGGAACGTGGCACCCGATCCATATACTATCCTGGTGTCGGAATGTGACACTCCGATC Y R N V A P D P Y T I L V S E C D T P I T G T W H P I H I L S W C R N V T L R S V P E R G T R S I Y Y P G V G M - H S D . . . . . . 5736 CTCATATACTATCCTGGTACCGGAACGTGGCACCCGATCCCCTAATCTCACTACTTTAAT L I Y Y P G T G T W H P I P - S H Y F N S Y T I L V P E R G T R S P N L T T L I P H I L S W Y R N V A P D P L I S L L - . . . . . 5676 TCATCAAGCCTTCTTTTATACCAAGGCATCATCATTAACAA S S S L L L Y Q G I I I N H Q A F F Y T K A S S L T F I K P S F I P R H H H - Q Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-7_PPS_1 (6022 5948,5870 5637) (frame '2'; 309 bp, 103 residues) 1 HLSRFIIFIP LVSVRDTPLL MYYPSRNVAP DPYTILVSER DTPILIYYPG TGTWHPIHIL 61 SWCRNVTLRS SYTILVPERG TRSPNLTTLI HQAFFYTKAS SLT AGS-8 (6216 5918,5886 5691) SCR (e 0.786 d 0.000 a 0.000,e 0.824) Exon 1 6216 5918 ( 299 n); score: 0.786 Intron 1 5917 5887 ( 31 n); Pd: 0.000 Pa: 0.000 Exon 2 5886 5691 ( 196 n); score: 0.824 PGS (6216 5918,5886 5691) SGN-E349977- 3-phase translation of AGS-8 (-strand): . . . . . . 6216 AGTAGGTATCATCGGCCAACTCAAAATAGAAAACAGTATATATTAGATAACATCATAAAA S R Y H R P T Q N R K Q Y I L D N I I K V G I I G Q L K I E N S I Y - I T S - N - V S S A N S K - K T V Y I R - H H K . . . . . . 6156 TCAACTATAATACTCAACATGCAGCATTTACAATTACCATAACCCTTGGTTACAACACCA S T I I L N M Q H L Q L P - P L V T T P Q L - Y S T C S I Y N Y H N P W L Q H Q I N Y N T Q H A A F T I T I T L G Y N T . . . . . . 6096 AGCACATCAATGAGGACTCACGCCTCCTCATCATACTCATTTGGGAATTAGGTTCATTAG S T S M R T H A S S S Y S F G N - V H - A H Q - G L T P P H H T H L G I R F I R K H I N E D S R L L I I L I W E L G S L . . . . . . 6036 ATTGAATATATTAACATCTTTCAAGATTCATTATCTTTATTCCTCTCGTGTCGGTACGTG I E Y I N I F Q D S L S L F L S C R Y V L N I L T S F K I H Y L Y S S R V G T - D - I Y - H L S R F I I F I P L V S V R . . . . . . : 5976 ACACTCCGCTCCTCATGTACTATCCTAGTGTCAGAACGTGACACTCCGATCCTCATTCT : T T L R S S C T I L V S E R D T P I L I L : H S A P H V L S - C Q N V T L R S S F : L D T P L L M Y Y P S V R T - H S D P H S : . . . . . . 5885 ATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATACTATCCTGGTGTCGGAACGT I L S W Y R N V A P D P Y T I L V S E R F Y P G T G T W H P I H I L S W C R N V Y S I L V P E R G T R S I Y Y P G V G T . . . . . . 5825 GACACTCCGATCCTCATATACTATCCTGGTACCGGAACGTGGCACCCGATCCATATACTA D T P I L I Y Y P G T G T W H P I H I L T L R S S Y T I L V P E R G T R S I Y Y - H S D P H I L S W Y R N V A P D P Y T . . . . . . 5765 TCCTGGTGTCGGAATGTGACACTCCGATCCTCATATACTATCCTGGTACCGGAACGTGGC S W C R N V T L R S S Y T I L V P E R G P G V G M - H S D P H I L S W Y R N V A I L V S E C D T P I L I Y Y P G T G T W . . 5705 ACCCGATCCCCTAAT T R S P N P D P L H P I P - Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-8_PPS_1 (6036 5918,5886 5691) (frame '1'; 315 bp, 105 residues) 1 IEYINIFQDS LSLFLSCRYV TLRSSCTILV SERDTPILIL ILSWYRNVAP DPYTILVSER 61 DTPILIYYPG TGTWHPIHIL SWCRNVTLRS SYTILVPERG TRSPN AGS-9 (6517 5912,5874 5788) SCR (e 0.826 d 0.000 a 0.000,e 0.966) Exon 1 6517 5912 ( 606 n); score: 0.826 Intron 1 5911 5875 ( 37 n); Pd: 0.000 Pa: 0.000 Exon 2 5874 5788 ( 87 n); score: 0.966 PGS (6517 5912,5874 5788) SGN-E546506+ 3-phase translation of AGS-9 (-strand): . . . . . . 6517 TATTATTATCCCCAAAATCTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACTA Y Y Y P Q N L E V I I T R T S I L K L L I I I P K I W K S S S Q E H L S S N Y - L L S P K S G S H H H K N I Y P Q I T . . . . . . 6457 ATCTAAGAGTATCTAAGAAGCTAAAATACATAAAAAGCTAGTCTATGCCGGAACTTCAAG I - E Y L R S - N T - K A S L C R N F K S K S I - E A K I H K K L V Y A G T S R N L R V S K K L K Y I K S - S M P E L Q . . . . . . 6397 GCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAAAT A S R H E E E D P V Q A R S I S S P - N H Q D M K R K I Q S K L E A L A H P E I G I K T - R G R S S P S - K H - L T L K . . . . . . 6337 CCGGAGTAATGAAGACTGGCTAGAGTTGCGGTTGAGTTGAAGACGACGGCACGTTTGCTG P E - - R L A R V A V E L K T T A R L L R S N E D W L E L R L S - R R R H V C C S G V M K T G - S C G - V E D D G T F A . . . . . . 6277 CACTCCACAATGAACAAAAAGAAAACATACAAGTAGGGGTCACTACAAAACACAGGTACT H S T M N K K K T Y K - G S L Q N T G T T P Q - T K R K H T S R G H Y K T Q V L A L H N E Q K E N I Q V G V T T K H R Y . . . . . . 6217 GAGTAGGTATCATCGGCCAACTCAAAATAGAAAACAGTATATATTAGATAACATCATAAA E - V S S A N S K - K T V Y I R - H H K S R Y H R P T Q N R K Q Y I L D N I I K - V G I I G Q L K I E N S I Y - I T S - . . . . . . 6157 ATCAACTATAATACTCAACATGCAGCATTTACAATTACCATAACCCTTGGTTACAACACC I N Y N T Q H A A F T I T I T L G Y N T S T I I L N M Q H L Q L P - P L V T T P N Q L - Y S T C S I Y N Y H N P W L Q H . . . . . . 6097 AAGCACATCAATGAGGACTCACGCCTCCTCATCATACTCATTTGGGAATTAGGTTCATTA K H I N E D S R L L I I L I W E L G S L S T S M R T H A S S S Y S F G N - V H - Q A H Q - G L T P P H H T H L G I R F I . . . . . . 6037 GATTGAATATATTAACATCTTTCAAGATTCATTATCTTTATTCCTCTCGTGTCGGTACGT D - I Y - H L S R F I I F I P L V S V R I E Y I N I F Q D S L S L F L S C R Y V R L N I L T S F K I H Y L Y S S R V G T . . . . . . 5977 GACACTCCGCTCCTCATGTACTATCCTAGTGTCAGAACGTGACACTCCGATCCTCATTCT D T P L L M Y Y P S V R T - H S D P H S T L R S S C T I L V S E R D T P I L I L - H S A P H V L S - C Q N V T L R S S F . : . . . . . 5917 ATCCTG : GTACCGGAACGTGGCACCCGATCCATATACTATCCTGGTGTCGGAACGTGACAC I L : V P E R G T R S I Y Y P G V G T - H S W : Y R N V A P D P Y T I L V S E R D T Y P : G T G T W H P I H I L S W C R N V T . . . . 5820 TCCGATCCTCATATACTATCCTGGTACCGGAAC S D P H I L S W Y R N P I L I Y Y P G T G L R S S Y T I L V P E Maximal non-overlapping open reading frames (>= 64 codons): >C04HBa0119A16.1-_PGL-1_AGS-9_PPS_1 (6036 5912,5874 5790) (frame '2'; 210 bp, 70 residues) 1 IEYINIFQDS LSLFLSCRYV TLRSSCTILV SERDTPILIL SWYRNVAPDP YTILVSERDT 61 PILIYYPGTG ... finished at: Tue Jul 25 15:20:34 2006