##gff-version 3
##sequence-region C04HBa0069C22.1 1 107671
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	48951	49719	0.997	+	0	ID=SGN-U331630_alignment_1;Target=SGN-U331630 1 770 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	48951	49719	0.997	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U331630 1 770 +;Parent=SGN-U331630_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	50018	51364	0.997	+	0	ID=SGN-U341683_alignment_1;Target=SGN-U341683 1 756 -
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	50018	50417	0.998	+	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U341683 1 400 -;Parent=SGN-U341683_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	51009	51364	0.997	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U341683 401 756 -;Parent=SGN-U341683_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	54088	55185	0.947	-	0	ID=SGN-U322792_alignment_1;Target=SGN-U322792 1 1099 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	54088	55185	0.947	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U322792 1 1099 +;Parent=SGN-U322792_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	60724	72702	0.990	-	0	ID=SGN-U313098_alignment_1;Target=SGN-U313098 102 1875 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	72688	72702	0.667	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U313098 102 115 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	72406	72471	0.939	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U313098 116 182 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	71510	71572	1.000	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U313098 183 245 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	71092	71136	0.978	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U313098 246 289 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	70836	70936	0.950	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U313098 290 389 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	70450	70546	1.000	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U313098 390 486 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	69661	69732	1.000	-	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U313098 487 558 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	69085	69239	1.000	-	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U313098 559 713 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	68941	68998	1.000	-	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U313098 714 771 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	68447	68527	1.000	-	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U313098 772 852 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	68259	68345	1.000	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U313098 853 939 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	67756	67827	1.000	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U313098 940 1011 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	67525	67659	1.000	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U313098 1012 1146 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	67125	67198	1.000	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U313098 1147 1220 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	64367	64454	1.000	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U313098 1221 1308 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	63754	63831	1.000	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U313098 1309 1386 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	62624	62699	1.000	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U313098 1387 1462 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	62424	62464	1.000	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U313098 1463 1503 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	60724	61094	0.978	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U313098 1504 1875 +;Parent=SGN-U313098_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	70536	76350	0.996	-	0	ID=SGN-U313110_alignment_1;Target=SGN-U313110 1 743 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	76214	76350	1.000	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U313110 1 137 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	75094	75270	1.000	-	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U313110 138 314 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	73927	74013	1.000	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U313110 315 401 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	72646	72702	1.000	-	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U313110 402 458 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	72406	72471	1.000	-	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U313110 459 524 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	71510	71572	1.000	-	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U313110 525 587 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	71092	71136	0.956	-	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U313110 588 632 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	70836	70936	0.970	-	0	ID=GTH_SGN_U_tom_match_part_31;Target=SGN-U313110 633 732 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	70536	70546	0.909	-	0	ID=GTH_SGN_U_tom_match_part_32;Target=SGN-U313110 733 743 +;Parent=SGN-U313110_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	77964	78598	0.923	-	0	ID=SGN-U337504_alignment_1;Target=SGN-U337504 1 637 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	77964	78598	0.923	-	0	ID=GTH_SGN_U_tom_match_part_33;Target=SGN-U337504 1 637 +;Parent=SGN-U337504_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	77997	78801	0.913	-	0	ID=SGN-U322012_alignment_1;Target=SGN-U322012 1 713 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	78544	78801	0.880	-	0	ID=GTH_SGN_U_tom_match_part_34;Target=SGN-U322012 1 258 +;Parent=SGN-U322012_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	77997	78451	0.932	-	0	ID=GTH_SGN_U_tom_match_part_35;Target=SGN-U322012 259 713 +;Parent=SGN-U322012_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	89725	90139	1.000	-	0	ID=SGN-U340311_alignment_1;Target=SGN-U340311 1 415 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	89725	90139	1.000	-	0	ID=GTH_SGN_U_tom_match_part_36;Target=SGN-U340311 1 415 +;Parent=SGN-U340311_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match	92350	93248	0.995	-	0	ID=SGN-U343706_alignment_1;Target=SGN-U343706 1 625 +
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	92951	93248	1.000	-	0	ID=GTH_SGN_U_tom_match_part_37;Target=SGN-U343706 1 298 +;Parent=SGN-U343706_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	92682	92846	1.000	-	0	ID=GTH_SGN_U_tom_match_part_38;Target=SGN-U343706 299 463 +;Parent=SGN-U343706_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	match_part	92350	92511	0.981	-	0	ID=GTH_SGN_U_tom_match_part_39;Target=SGN-U343706 464 625 +;Parent=SGN-U343706_alignment_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	gene	48951	49719	.	+	0	ID=GTH_SGN_U_tom_gene_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	48951	49719	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	48951	49719	0.997	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	gene	50018	51364	.	+	0	ID=GTH_SGN_U_tom_gene_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	50018	51364	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	50018	50417	0.998	+	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	51009	51364	0.997	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	gene	54088	55185	.	-	0	ID=GTH_SGN_U_tom_gene_3
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	54088	55185	.	-	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	54088	55185	0.947	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	gene	60724	76350	.	-	0	ID=GTH_SGN_U_tom_gene_4
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	70536	76350	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	76214	76350	1.000	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	75094	75270	1.000	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	73927	74013	1.000	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	72646	72702	1.000	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	72406	72471	1.000	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	71510	71572	1.000	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	71092	71136	0.956	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	70836	70936	0.970	-	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	70536	70546	0.909	-	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	60724	72702	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_2;Parent=GTH_SGN_U_tom_gene_4
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	72688	72702	0.667	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	72406	72471	0.939	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	71510	71572	1.000	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	71092	71136	0.978	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	70836	70936	0.950	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	70450	70546	1.000	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	69661	69732	1.000	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	69085	69239	1.000	-	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	68941	68998	1.000	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	68447	68527	1.000	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	68259	68345	1.000	-	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	67756	67827	1.000	-	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	67525	67659	1.000	-	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	67125	67198	1.000	-	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	64367	64454	1.000	-	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	63754	63831	1.000	-	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	62624	62699	1.000	-	0	ID=GTH_SGN_U_tom_exon_30;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	62424	62464	1.000	-	0	ID=GTH_SGN_U_tom_exon_31;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	60724	61094	0.978	-	0	ID=GTH_SGN_U_tom_exon_32;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	gene	77964	78801	.	-	0	ID=GTH_SGN_U_tom_gene_5
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	77997	78801	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	78544	78801	0.880	-	0	ID=GTH_SGN_U_tom_exon_33;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	77997	78451	0.932	-	0	ID=GTH_SGN_U_tom_exon_34;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	77964	78598	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_2;Parent=GTH_SGN_U_tom_gene_5
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	77964	78598	0.923	-	0	ID=GTH_SGN_U_tom_exon_35;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	gene	89725	90139	.	-	0	ID=GTH_SGN_U_tom_gene_6
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	89725	90139	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	89725	90139	1.000	-	0	ID=GTH_SGN_U_tom_exon_36;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	gene	92350	93248	.	-	0	ID=GTH_SGN_U_tom_gene_7
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	mRNA	92350	93248	.	-	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	92951	93248	1.000	-	0	ID=GTH_SGN_U_tom_exon_37;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	92682	92846	1.000	-	0	ID=GTH_SGN_U_tom_exon_38;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C04HBa0069C22.1	GenomeThreader_SGN_U_tomato	exon	92350	92511	0.981	-	0	ID=GTH_SGN_U_tom_exon_39;Parent=GTH_SGN_U_tom_gene_7_AGS_1