<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-02-20 08:46:39"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341497" ref_strand="+" ref_description="SGN-U341497        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>ccccctcgagagagtgccaagaggcgtaggggccgatcagaggatgaggcacaagcaaagaagaaggagcgccgagagatggaggctgcgaggagagcctcgctgagacggaggcacaccaaatcagagcatcgcagatagcggatggggcgtctagctcccgcactgtagagatagcaagaggcactactgatggtgcggttgttgctgaggacatcactgagggtgtccagattgctgaggacaccactgagggtgtccagattgcagaggatgtgggttccaggaaaccggacccaccatcttgttaaatcgacggtgctttgcgccacaggtttgcttcacctaccactctaatatttagattttttatgcattggggacagttgcatgcttttttgttgggggtggggtaaatggaaagtgagtgttagggtgaagtctgagtagcccaactcactatcctcttttggggttttcttgcctgtgttctttttccccaaaagactgattactttttttgttgaaccgacacgttatatatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="-" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="22852" stop="415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22553" g_stop="22314" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22313" i_stop="1023" i_length="21291">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1022" g_stop="713" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="547" r_length="311" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="-" ref_id="SGN-U341497" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22553" e_stop="22314"/>
          <exon e_start="1022" e_stop="713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCCGAGAGAGAGTGCCAAGAGGCGGAGGGGTCGATCAGAGGATGAGGCGCGAGCAAGAAAGAAGGAGCGCCGAGAGATGGAGGCCGCGAGGAGAGCCTCACTTACTGAGGCGGAGGCACACCAGATCAGAGCATCACAGATAGCGGCTGGGGCGTCTAGCTCCCGCACTGTAGAGACAGCAGGAGGCACTACTGAGGGTGCAGTTGTTGCTGAGGACATCACTGAGGGTGTCCAGATTGCATAGGATATGGGTTCTGGGAAACCAGACCCACCAGCTTGTTGATCGACGGCGCTATGCGCCACAGGTTTGCTTCACCTACCCCTCTAATCTTTAGATTTTTTTTATGCATTGGGGACAATTGTATGCTTTTTTGTTGGGGGTGGGGTAAATGGAAAGTGAGTGTTAGGGTGAAGTCTGAGTAGCCCAACTCACTATCCTCTTTTGGGGTTTTCTTGCCTGTGTTCTTTTTCCCCAAAAGACTGATTACTTTTTCTGTTGAACCGGCACGTTATATCTTTTGTACATAGTTTAAATCTGAAGCATGATGGCTGAAATGATATCCCGATAAAACTGGAAAAGGTTGCATGAAAAGGCGTAGTAACTGATAATTGTGTGGATCTAAACATGAAATAGAGTTACACCATTGCACTACCCTAAACCTTCAAGTCGAACTAGGTGTCTAATAATCTTGTATAGTGATGAGATGTCAAGTGAGTGTGAGGAAAGTTGAATAGTCCACTACTGATACTGAGCTAGAACTTGCCAGGTTAGTCCTGCTAAAAGTAAGTTGTAACATACAATTAGGAAAGGATCATGAGCCCTTATTCAATATAGCCCATTTCTAGCCTAAATAAAAGAAACCAAATGAAAGTTATCCTTCGTTGATCCAAATAATTTGAGCTTAAAATTAGACCTTTCTTTTTCACCCCAACTGATCTTTTCTGGGAACCATATGTTGGCCCTGGTCCCTCCTTGGACATGTGCACCTCAGCTTATGCCAAAAGCATAAGTTGAGGGTGGCTAATGTATAAACAACCTTCGTTATGGCCCTGACCCGATTTTAGGTATTGTGTACTTTGACTCATGGCAAAGCCATGAGTTGAGGGTGGCTGTTTTCAGGAATGCGCTTGAAAGTGGGGTTGAAAGAACAAAGAGAGAGAAAGAACAAAAGAAAGTGACTCAAGAACTCGTTGATTAAAAAAATAAAAAAAGAGGGCAATATTCAAAAATTACAAACAAGAAAAGAAAAGAGTCACTTACACAGATGAAGAAAGAAGGGAAACAGCAAGGTGAAAGAATAGGAGAAACTGGGCGAGATAAATTGATATAGAGCGGAAGATTTAGCCGACATGTCAAGGAGGGAAAAAAGTCACTAAAGTATACCTAAATAAAAACTACCTGACTCTGAGCCTACGTTACGAGCTAAAAAAGTCCTATCGTGATCCTAAGGGTTGTATAGCGAACTTAAGGCAGTGAAAATAAGGGCAAGCTTATGGCAATAGGTATGAATGAGTGTGACTTTGTTCTGAGAGCGAGTGTTGAAATGTAATCCTTATACTCAAACTGAAATCATTGTGTGAAAAATGAGGATTTTGTTCTAAAGTGAGGACACTAGTTGCAATACCGGAATTATTAGCACCTCGGTAAGAAATTGAAGAGGATAGGTGTTAGTGCATGGTGAGTCTGTGTCATATTCGAATCCCACAAAAGTCAAGCCTAATAGTGATAGTATGCATAAATTTGATGGGATTAGTGGGGATTGATAGCCAAATGATTGCAAAGGATAAAACATGAATACTATTGTACAAAGATTGTGTAGTGAGTCATAGTGCATCTCTTGAGGACAAACAACGAATTTAAGTTGAGGGTGTTGATATACCGTGGTTTCACGGTATAATTAATACCTTTTCCTTAAGTTTATTGTGTCCGAAAGCGTTTTTGTGCTAATTTTGATATAAGTTTTTCTTTGTTTTGCAGGAAATCTGTCTAAAACTGAATGCGGAGATTTTGAGCGAAAAATGCAGAAGAGACCACCTACGGAGCTTATGACGGTCCGTCGTGCTTGTGACGGTCCGTAGGTGGCAGCATAGAGAAGCTGCTGAAGGAAGATGGGGAAGTCTGACCAAGTGTGGGATTACGAAGCTTGTGACGGTCCGTCATGGATATGATGGTCCATCCTGCAGATTCGTCACGAAGATCAGAGAAGTGATCCTAGTACCCAGATTCCAAGAGTTGAAGTATTTGGTAACGAAGACCCTCGACGGACCGTCGTGCCTGTGACGGTCCGTCACACTTGCCGTCGAGGGGAATGAAGAAAGCAGCAGAAGAATTGCACCAAGTATGGGGCGACGGAGCCCACGACGGTCCGTCATGACGACGACGTTCCGTCGCGTGGTCCGTCGACCCAGCCGCGTTTTGACCGATTTCCAGTAATTAGAATCCTTGTTTAATTAGGTTTTTATTTTTTTATTAATAGTTCGAAAAACCTCGTTTTTGAGGTTAGACTCTGGGAGATTTAACATCATATTATTAGACTTTGTTTTTATGAGTTTTTGATTATTGGAGATTCTTACAAGTAACTCTTGTTGATTAATCAAGCAAATTTTCAGACTTTATTCTTTCTCATTAAAGTAAGTACATGAATTTCAGTCTCTGAACTCTGTGACGACTCAGCAGGACGGACCGTCGCAGGCACGACGGGCCGTCACAGGCTGCGTGACCCTGACTGGGTCGGATTTATGTTGAATATTTTAAGGGGAGTTTTGGACTACTCCTGCTTATAATTATAAAGTTAGTGCTTTAATGTTAATAATTTAATTACTTTGGGGTTAAAAGAGAGAACCTTGAAACAAGTAGTGGGGTATTTTATCATCTTTTATACTTAATTATATGCTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAGAAAAAGAGAAAGAACAGAGAGTAAAGCGAGAAACGATCGAGAGGAGAGGAAAATGCAAGGAAAGCACAGGTTTGGGAAAGTAGATTGCTTGATCACAAATTCTTCGGTGGAGGTAGGTTATGGTTTTATGCTATTCTATAGTAAACTCTTAATAGCGAATAAAATGTATTGGGTAGTATCATAAACCCTTCTATATGCTTAATTGTGTGCTTGCATGATATGATTATTTAATTGTGATGAAATAAGCATGATGAGGCTGTTGAATCTTAAATCTTAAAAACCTCTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTTAATGGATCGGGTGTCACGAACCGACACATAGTATTAAGGGATCGGGTGTCACAAACCGACACATAGTATTAGGGGATCGGGTGTCACGAACCGACACATAGTATTAGGAGATCGGGTGTCACGAATCGACACATAGTATTGGGGGATCGGGTGTCACGAACCGACACATAGTATTAGGGGATCAGGTGTCACGAACCGACACATAGTATTAGGGGATCAGGTGTCAAGAATCGACACATAGTATTAGGGGATCGTGTGTCACGAACCGACACATAGTATTAAGGGATCGGGTGTCACGAACCGACACATAGTATTAGGGGATCAGACTGTCACGTTCCGACACAAGAGGAATAAAAGAGAATGAATCTTGAAATATGTTAATATACTCAATTTAATGAACCTAATTCCCAAATGAGTACGATGGGGAGGCGTGAGTCCTCATTGATGTGCTTGGTGTTGTGACCAAGGGTTATGGTAATAGTAAATTCCGCATGTTGAGTATTGTAGTTGATTTTATGATATTATATGATATATACTGTTTTCTATTTTGAGTTGGCCGGTGATATCTACTCAGTACGGGTGTTTGTATTGACCCCTACTTGTATGTTTCTTTCTTTGTTATTTGTGGAGTACAGCAAACGTACCGTCGTCTTCAACTCAACAGCAACTTTAGCCAGCCTTCACCACGTCAGATTTTAGGGTGAGCTATTGTTCCTAGCTCAGACTGGATTCTCTCTCATTCATGTCTTGATGTCCTTGAAGTTCGGACATGGACTATCTCTTGTATTTGTTTAGCTTCCTAGACATTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGATAAGTTTTGAGTTTTAGAAGTTGATTATTGATTCTGTTAATAGGTTTTAAGTCTTCCGCATTTATTTCTATTTATTATGTTTGAAATGTTGTGGTTTAGATTGGTTGGTTTACTCACATAGTAGGATGAGTGTGGGTGCCACTCACGACATGTTTTGGGTCGTGACAAACTTGGTATGAGAGCATTAGGTTCGTTGGTCTTATCACACAAGAACGAGTTTAGTAGAGTCTTGAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCTTTCTTTCGTGCTATTACTTGGATCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTTGCAGATGGTTAGAACTAGAGCAACAACTACGCCAACACCAGCACCGGCAGGACAGGGTGCGTTTGAGCCAGCCACTGGGGCTGTAGCTCGAAGAGGAGCAGTGACAAGGGGTCGTGGTAGAGTTCGTGGGAGGAAGTCCTCTAGAAGAAGAGGACAAGCACTTGTCCCATCTAGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAGGGTGAGGAAGGGGAAAGTGAGCAAGTGCAGAATGAGGAATTACCAGCCAACCTACCCCAGAAATGATTAATTAGGTTCTTGCTTATCTTAGTGGGTTATCTGATCAGGGCCAGACACCTCTAGTGTTTTCTGCACCAGCGCCTCAGGTTCCGGGAGTACAACATGCAGCTGCTGTGGCTCCCCGTATGGATGCCTCGTTGGAAATAGGCACGTTTCCTCATTTGACTACAGGGCCTATAATGACAAGCGATCAGCATGAACTTTTCAGTAAGTTCATGAAATTGAAACCTCTAGTCTTCAAGGGTGCTGAATCCGAGGATGCGTACGATTTTCTGGTTGATTGTCATGAGTTACTACATAAAATGGGCATAGTGGAACGATTTGGCGTTGAGTTTGTAACCTATCAGTTTCAGGGAAATGCCAAAATGTGGTGGCGGTCACATGTAGAGTGTCAACCCGCACAGGCACCACCTATGACTTGGGCGTCGTTCTCTAGCTTATTTATGGAGAAGTATATCCCCCGGACCTTGAGGGATAGGAGGAGAGATGAGTTCTTGAGCCTAGAGCAAGGCAAGATGTCGGTGACTGCGTATGAGGCTAAGTTTTGTGCATTATCAAGGTATGCCACCCAGCTTTGCTTCAGTCCACATGAGCTGATTCGCCGTTTTGTGAAGGGGTTGAGGTCAGATTTGTGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCCTTTCAGGAAGTGGTAGACTTCGTGATAGAGGTGGAGGGAGTGAAGCCAGATGACTTCACCATGGCATCGACATCTAAAAGGTTTCGTAAGGGAAGTGAGTTTAATGGTTTTTACCCTAGAGGGCAAGGTTCAAGAGGTTATCCAACCGGACCTATTCAGTCCTCACTGCAGACTGTAGTTGGGGGTCCGCCGCAGACCGGTCAACACTTCTCTGAGTTTGGAGGTTATCCCCAGATCCCATCGTTCTCACAAAGACCTATGCTTGAATCTAGAGATTGTTATGAATATGGAGAGACTGGACATATTAGGAGAAATTGTCCAAAACTGAGTTACAGACCCCCAATAATTAGAGGTAGAGGTGGTCATGGAAAAGGCTGTTATTTCGGGAGGACGTGGTGGCCGAGGTAATGGTGGTCACCAAAACGGCCGGGGTGACGGACAAATGGGAACTACTGCAGCGCAATCTGGTAGAGGCAACAGGCAGACAAGTGATAGGGCCCATTGTTATGCTTTCCCTGGGAGATCGGAAGCGGAGACATCAGATGCTGTCATCACAGGTAATCTTTTGGTTTGTGATTGCATGGATTTTGTATTATTTGATCCTGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTTTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCCTGTGACTTTTATGGAGAGCAATACTCATATAGACCTGGTTATCTTAGAAATGGTTGATTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCAAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGGGACAGAGCCGTTAGTGTGGGATGGTGACTACACTTCCACTCCAGTTCATATCATCTCCTTGATTCGTGCTAAGAGAATGGTTAGAAAGGGTTGTTTAGATTTCTTAGCACACCTCAGGGATGATACTACCCAAGTACCTTCGATTGAGTCGGTTTCAATAGTCTGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACTGGATAGGGATATCAACTTTTGTATTGATCTGGAGACGGGTACTCGCCCCATTTCCATACCCCCTTATAGGATGACTCCCGCTGAGTTAAGAGAATTAAAGGCCCAACTTCAAGAGTTGTTAAGCAAAGTCTTTATTAGACCAAGTGCATCCCCTTGGGGTGCTCTTGTTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGGATGTGCATTGACTACAGACAGTTGAACAAGGTAACTATTAAGAACAAGTATCCCATTCCTCGCATTGGTGACTTGTTCGATCAGTTACAAGGTGCTTGTGTCTTCTCTAAGATTGACTTGAGATCCGGTTATCATCAATTGAACATACGGGCAACGGATATGCCCAAGACTGCTTTTCGGACCAGATATGGGCATTATGAGTTCTTAGTAATGTCTTTTGGGCTTACGAATGCCCCTGCTGCTTTCATGAGCTTGATGAACGGGATTTCCAAGCCATATCTGGATCTCTTTGTCATTGTATTCATTGATGACATACTGGTATACTCGAAGAGCAAGAAAGAACATGAGGAGCACTTGAGAATGGTATTGGAAATGTTGAGGGAGAAAAAGCTTTATGCCAAATTCTCTAAGTGTGAGTTTTGGCTAGATTCAGTGTCCATTTTGAGGCACGTAGTTTCTAAGGACGGAGTGATGGTGGATCCTTCCAAGATTGAAGGAGTGAAGAATTGGGTAAGACCTACTAATGTGTCAGAAATAAGGAGCTTTGTTGGTTTATCCAGCTACTACCGTCGATTTGTCAAGGGATTTTCTTCTATTGCTTCCCAATTGACGAACATGACTAAGCAGAATGTTCTATTTGTATGGTCGGATGAATGTGAAGAAAGCTTTCAGAAACTCAAGACTGTGTTGACTACTGCACCAATTCTCACCCTGCCAGTGGAAGGAAAGAACTTCGTTGTTTATTGTGATGCATCCTATTCTGGTTTGGGTGCAGTGCTAATGCAAGAGAAGAGTGTAATTTCTTATGCTTCGAGGCAATTAAAGGTGCATGAACGTAATTATCCTACCCATGATTTGGAGTTGGCTGCAGTAGTGTTTGCATTAAAGCAATGGAGACATTATCTATATGGGGTGAAGTGTGAAGTCTATACAGATCATCGTAGTTTACAGTATGTCTTTACTCAGAAAGATTTGAACTTGAGACAGAGGAGATGGATGGAACTACTGAAGGATTATGATGTTACCATCTTGTATCACCAGGAAAGGCTAATGTTGTGGCAGACGCCTTAAGTAGAAAAGCAGGGAGCATGGGTAGTTTAGCCCACTTACAAGCTTCTAGACGCCCATTGGCTAGAGAGGTTCAGACTCTGGCTAACGACTTTATGAGGTTAGAAGTAAATGAGAAGGGAGGATTTTTGGCCAGTGTGGAGGCGAGATCTTCTTTTCTTGACAAGATCAAGGGAAATAGTTTGATGATGAGAAACTAAGCCGAATTCGGGATATGGTGTTGCGAGGAGAGGCTAAAGAAGCAATAATGGATGAGGAAGGTATTTTTAGAATTAAGGGAAGGGTATGTGTGTCCCGTGTTGATGATTTGATCCACACTATTCTTACAGAGGCTCATAGTTTCGGATATTCTATACATCCTGGTGCAACCAAGATGTACCGTGACCTAAAGTAACACTTTTGGTGGAGTAGAATGAAGCGCGACATTGTTGATTTTGTTTCCAAATGTCCAAATTGTCAGCAAGTAAAGTATGAACATCAGAGGTTTGGAAGAACACTTCAGAGAATGCCCATTCCTGAATGGAAGTGGGAGAGAATTGCAATGGACTTCGTGGTTGGTCTTCCAAAGACATTGGGGAAGTTTGACTCTATTTGGGTAATTGTGGACAGATTAACTAAGTCTGCTCACTTCATCTAGGTCAAGGTGACCTACAATGCAGAGAAGTTAGCTAGGCTCTACATCTCAGAAATTGTTCGATTGCATGGAGTTCCACTTTTCATCATATCAGATAGAGGTACACAATTTACTTCTAAGTTTTGGAGAACACTGCATACTGAATTAGGTACTAGGTTGGACCTTAGTACTACATTCCACCCTCAGACCGATGGTCAGTCTGAGCAAACAATTCAGGTGTTGGAAGATATGCTTCGTGCATGTGTGATAGAATTTGGGGGTCATTGGGATAACTTCTTACCCTTAGCGGAGTTTTCATACAATAATAGCTATCACTCAAGTATTGATATGGCTCCTTTCGAAGCATTGTATGGGAGGAGATGTAGGTCTCCCATTGGTTGGTTTGATGCATTTGAGGTTAGACCGTGGGGTACTGATCTTTTGAGGGATTCATTAGAGATGGTGAAATCTATTCAAGAAAAGCTTTTAGCGTCTCAAAGCAGGCAAAAGGAATATGCAGATCGAAAGGTTAGAGACTTGGAGTTCATGGAGGGTGAGCAAGTCTTGCTGAAGGTTTCGCCTATGAAAGGGGTGATGCGGTTTGGAAAAAGAGGTAAGCTAAGCCCAAGGTATATTGGACCATTTGAAGTACTTAAGCTAGTAGGGGAGGTGTCTTATGAATTAGCCTTGCCCCCAGGAGTATCAGGAGTGCATCCGGTATTTCATGTGTCTATGTTGAAAAGATACCATGGGGATGGAAACTACATTATTCGATGGGATTCAGTTCTGCTTGATGAGAATTTGACTTATGAGGAGGAGCCTGTTGCCATTCTAGATAGACAAATTCGCGAGTTGAGATCAAGGGAGATTGCATCCATCAAAGTTCAATGGAAGAATCGACCAGTTGAAGAGTCCACTTGGGAGAAGGAGGCTGATATGCGAGAAAGATACCCACACCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTTTCTTCTTTTGATCGTTCGGGGACGAATGATGGGTAAATTGGTATCTATTGTAACGACCTGTTAGTCATTTTGGGCAGTAGAGTTTATTTCTGGTAATTATAGTCTGAGTCGACGGATCCCACGATGGACCGTCATGGGCACGACGGACCGTCGAAGGTGTGTCATTCCAAAACACTTAGAATTCTGAAAAATTGGGTACTGAGAACAACTCACTGAACTTCGCGACGACATGGCAGGACGGACCGTCGTGGGCACGACGGACCGTCACAGGCCCTTCAGAAAATTTCAGTCTCTGAACTCTGTGACGACTCAGCAGGACGGACCGTCGCAGGCACGACGGGCCGTCACAGGCTGCGTGACCCTGACTGGGTCAAAATTCTGTTGAATATTTTAAGGGGCGTTTTGGACTATTCCTGCTTATAATTATAAAGTTAGTGGTTTAATGTTAATAATTTAATTACTTGGGGGTTAAAAGAGAGAACCTTGAAACAAGTAGTGAGGTATTTTATCATCTTTTATACTTAATTATATGCTAATTAGGATAAAAGAAAGAGGGTTTGAATAAGAAAAAGAGAAAGAACAGAGAGTAAAGAGAGAAACGATCGAGAGGAGAGGAGAACGCAAGGAAAGAAAAGGTTTGAAAAAGTAGATTGCTTGATCACGAATTCTTCGGTGGAGGTAGTTTATGGTTTTATGCTATTCCGTAGTAAACTCTTAATACCGAATGATATGCATTGGGTAGTATCGTAAACCCTTCTATATGCTTAATTGTGTGCTTGCATGATATGATTATGTAATTGTGATGAAATAAGCATGATGAGGCTGTTGAATCTTAAATCTTAAAAACCTTTTGTTAATGATGATGCCTTTGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTTAATGGATCGGGTGTCACGAACTGACATATAGTATTAAGGGATCGGGTGTCACGAATCGACACATAGTATTAGGGGATCGGGTGTCACGAACCGACACATAGTATTAGGGGATCGGGTGTCACGAACAGACACATAGTATTAGGGGATCGGGTGTCACGAACCGATACATAGTATTAGGGGATTGGGTGTCACGAACCGACAGATAGTATTAGGGGATCGGGTGTTACAAACCGACACATAGTATTAGGGGATCGGGTGTCACGAACCGACACATAGTATTAGGGGATCAGGTGTCACGAACCGACACATAGTATTAAGGGATCGGGTGTCACGTTTCGACACAAGAGGAATAAAAGATAATGAATCTTGAAATATGTTAATATACTCAATTTAATGAACCTAATTTCCAAATGAGTATGATGGGGAGGCGTGAGTCCTCATTGATGTGCTTGGTGTTGTGACCAAGGGTTATGGTAATTGTAAATGCCGCATGTTGAGTATTGTAGTTGATTTTATGATATTATCTGATATATACTATTTTCTATTTTGAGTTGGCCAATGATATATACTCAGTACGTGTGTTTGTACTGACCCCTACTTGTATATTTCTTTCTTTGTTATTTGTGGAGTACAACAAACGTACCATCGTCTTCAACTCAACAGCAACTCTAGCCAGTCTTCACCACGTTAGATTTCAGGGTGAGCTATTGTTCCTAGCTCGGACTGGATTCTCTCTCTTTCATGTCTTGATGTCCTTGAAGTTCGGACATGGACTATCTCTTGTATTTGTTTTAGCTTCCTAGACATTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGATAAGTTTTGAGTTTTAGAAGTTGATTATTGATTATGTTAAATGGGTTTTAAGTCTTCCGCATTGTTTTCTATTTATTATGTTTGAAATGTTGGGGTTCAGATTGGTTGGTTCGCTCACATAGAAGGATGAGTGTGGTGCCACTCACGACACGTTTTGGGTCGTGACACAAATATATTTATTTTTATGATATTTACTATATCTCATACATTTAGGATATGATACATAACCCACCCACCCACCACCCACCCCCACCCCCTTTGTGCTATATAAAATTCACACTTTTGGTTTATGCTATTTTGTAATTGGTTGATACTTTAGTAACAGAATAATCAATATGTCGATTAAAAACATTTTGAGATGTTTTGATATACAATCTGTCTTTAGTTCTATTTAATTTTGCACATTCCAATCAATCTCGACAATATATATCCACCCTTCTTTTTATTTATTACTAATGAAAAATGTTGTTCACTATTTTATTAAATATGAAATGAAATAAATTTATTTTGTTCCTTGATTAAAAATAGATGTCTTGAACGATCAAATATACATACACTTTGACTTCAAATCACCTTAATTCCAAGATTTACAAGAAATGAATTACTAATATAAAATCTTGTTTTCTTTCATTTTCAGGCATAGAGAGTTCCATGTTCAATCCTGGTATTGAAATTAGCCCAGCAAAATCAGGAATGAGTCAAGGACAATAAGTATGGAATGCAACTCTTTCAAATACATGTACATGTACTCTACTTCAAGTGAAATTGAGTATTCCAAATTTTGATTCTGTCACTAAAATTAACACTACCATCATCTCCAAGTACATGATGATATCTATGATGTTAATGGTGGTCTTCCAATTTATGCACAAACAAGTGTATATTTTATTTATGATGGAAATAATCTCAATGTTAAACTAAATGACTTAACAGAAGCTTGTTCATGAACATATGTATGAAAGATGAATACAAATAATTCTGTAATTTAATAAAGTTGCTTCATTTTTGTTTGTCTTTGTTAGTTTGAAATTGTTCATTTTAACATAAAATTGACTTGTTTTGTACATTACAAGTTTGTACTGAAATTACATTTCAATAGTAATTATGTGTACAAAATCTCCATAATATTTAAGCGTGTATGACAAATTTGAGGTGAACTCAAATATAAAATTTATGTGTTTTTCCTTCTAAAATACATTTAAAATGATATGAAAAATCTACTATGCCTCATAATAAGTGAATTGTGTGACTATTACTCGACGCTTTAAATTCTTATTGAAAGAATAAGATGATCTTTTCGACCAGCTTCAAGGTGTTTCTCTCTTTTCAAAAATTGATCTTAGATCAGGCTACCATTAGTTGAAACTTAGGGAATGTGATATTCGAAAGACAAGCTTTTAGAACTAGATATGGGCATTATAAATTTTTGGTCATGTCGTTTGGTTTGACCAATGCATCTGTAATATTCATGGATCTTATAAATAGAGCCTTCAAACCTTATTTAGATATGTTTGTTATCGTTTTCATTGATGATAGATATACTAATATTTTCAAGGAATGAAGAAGAGCATGCTAGTAACCTCAGGATAGTTCTTCAGACTTTGAAAGATAAGGAGTTATACGCTAAGTTCTCAAAATGTGAGTTTTGGCTTAAATCTCGTGGCATTCTCGGGCCACATAGTTTTCGGTGTTGGGTTTAGCGTTGATACCCAAAAGATAGAAGCAATCCAGAGTTGGCCTAGACCCATATCTCCAACAGATATACAAAGTTTCTCGGGTTTGGGTGGTTACTATAGAAGATTTGTTGAAGGATTTTCATCTATTTCATTTCCCTTTGACTAAGCTGACCCAAAAGACAGTCAAGTTTATATCGTCTGAAGCTTATGAAAAAAGCTTTCAGGAGTTGAAAACGAGGCTGATTATAGCTCCGATTTTGACCTTATCAGAGAGTACTCAAGGTTTTGTGGTGTATTGTGATATCATCAAAAGTTGGTTTTGGGATGTGTGTTTATGCAGAATGAAAAAATTATAGCTTATGCCTCCATAGAGTTGAAAGTTCATTAGAAGAACTATCAAACCATGAATTGAGTTGGTTGTTGTGGTATTAGCCTTGAAGATATGGTTTCACTACTTGTACGGCGTTCATGTTGATATATTCACTAATTATAAGAGCCTACAATATGTGTTCACCCAGAAGGAGCTCAACCTCAGACAAAGAAGGTGGTTAGAACTACTCCACCCTGGTAAGGGTAATGTGGTTGTTGATGCTTTAGTAGGTCATCCATAGGGAGCACCTCCTATGTTGAGGAAGAAAATATGGAGTTATCTAAAGACGTGCACATATTTTCACGCTTGGGAGTCAGACTTATGGATTCAACAGAAGAAGGAATAGTGGTGACTCATGGGGTTGAATCATCACTAGCGTCAAAGATGAAAGAAATACATTTATGGGGTTCAAACCACCATTAATGAACCCCCTCTAATGGTAATAGGGTTGGTAAATAACTCATGTGACTTAATTGTGGCACACCTAATTGTAGGGGTTCTTTCAATTGCCGTGACACTAAATTGTGGGGGTCACTAACCACCGTAACATGTAATTTTAACCCTCACAATTTAAGCATTTTTTTGCAGTGTACATTAGTGGTAAAATTCATTTTCTAAACCGTTTAAGTCAATCAAACATGAGAAAATTTAAAAAATATTTTTTAAAATATATTTTCCTTTAGTACCAAACACACTGATGACAAAAAGGAAATTATATTAATAATCAAATTTATTTTCGAAAACATTTAAATTAACCAAACATGAGAAATTGAATTCAAAATGTGTTTTCCTTTCTTACAGAACACTCTAAAGAAAAAAAGGCAATTATATTAAAGTTAAAATTCATTTTCTAAAACGTTTATGTCAACCAAAGAAAATTGAAAAGATATTTTCCAAATATGTTTTCATTTCATACCAAACACACTCTGGTTCAAGAAAAAAAGCAATTATATTAATGACAAAATTCATTTTCTAAAATATTTATGTCAACCAAGAGAAAATGGTAAAACTCATTCATGTTTTTTAATCTAGTTTGACCAAATCTCTCTTTATGCAGTTTTAGAAAAAACAATTAATTAACAAATATGGTAAATACTCCTATTATTATTCTCTCATTAGAAAATTAAAATTAAGTTTACCTATAATAGAACCTCCCATAAATTAATTAATTTACTAAATCAACCTCCCATGAAACATCTATAAATGAAAAGTTGATAGGGAAAAATTGGAAGTAATTAATTATCTTGAATTTATAACTTATTAAGTTTAGCAACTAGATATGAACTTGAATTGAAAACTTGAACTTCTTAAAACTTGAATATATATATATATATATATATATATGTATATGTATGTATGTATGTATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATATATATATATATATATATGTATGTATGTATATATGTATGTATGTATATATGTATACATACATATATATATATATATATAAATGGCCTTGTGTGTCCATAACTCAAAATAGGTGACCGAACGGTCGCCGCCCGACTAAATAGGAGATTTCCCCCTATTCTTGAGAGATTCCCTCTCTATCTCTTTCGATCTATCAGAACAGATCAGGCTATCTATCAATCGATTTGAAAATAGCACGCTCATCTCGCTTTTCGTTCATTTTCGCCATGAATATATATATATATATATTCAAGCTTTAAGAAGTTCAAGTTTTCAATTCAAGTTCGTATCTGGTTGCTAAACTTAATAAGTTATAAATTCAAGCTAATTAATTACTTCCAAGTTCATTTTCCAATTTGAAGTTCTAACTTTAACTTCGAATTCTAAGTTCAAGTTCTAAGCTCAAGTTCAATTTCTAATTTCAAGTTCAAGTTCTAATTTCAAGTTCAAGTTCAAATTCTAAGTTTAAGTTCTAATTTGAAGTTCAAGTCTAAGTTTAACTTAAAAATATATTTTGTTTGGTCTAATTAAGTTCACAAAATATGCTTTATTTTATCTAATTAAGTTCAGTTAGTACAAGATCTACACATTTAAAGCTTAATTAGTTAATCAATACTAATTTCATGTTCAAAAACCAAGTTCTAATAAGAATAATATTAAGCTATAATAAATTAAAGTCAACACCATTTCAAGTTCATATTCCTGATTAAGTTCAATTTATGGTAAATATAAATTATAATTAGTCTAAAATCCTAAAATCTTAGATTTCCAAATTTAAACTACTCATAAATTCAAAATTCAAACTAGTCTTAAAATTACAATTTCAAACTAGTCCTAAAATCCTAAAATCTAACTTGTGCTAAAATCCTAAATTCAAACTAGCTATTGCTAATCCCAAATTCAAACTATTAGTTCTAAAATTCAAATAATAATTCAAACTCTAGTTAGTCCTAAATCCGAAAATCAAACCAACTCAAATTATACCCAAATTCAAACAATTCCTTAAATACCCTAATTCAAAATAATCTTACATTCGCAATCAAACTAATCTTATCATCTCAAAATCAAGATAATCTTACAATACCAAAAATTTAAACAAATTCTAAGCTACCGTAATTCAAACTAACCCTAACATTAAAATTTCAATCACAATCAAGAAATACAAACTAACAATCAATAAATAAAAAATAATAAATTAATTATAATTAAATAATTACTAAAATAAAATAAATAAAAAATAATTGATTTTTTTAAAATAATAAATCAAACGCTAACCTTGAAGGAAAGGAGAGAATAAAGAGAGAGGGGAAGGAGGAGGCGTCAAGCTCCAAACGGACGGTAGTAGCAGCTCCTGACGGATGGCGGATACGGAACCTGACGGCGGATTTGAGGCGAAGTGGAGAGAAGAGAGGATAATTTGATAAATGAGAAATAGGTGAGAATGGGGGAAAATCGCGTCTGTATGTATTAGATATTTAATGAAAAGCGACGGACAATGTCTCTATGTCTGTCGCTGTTCATTAAGTAGTTGACCAAATAATTTCAAGAAAAAGCGACGGACATAGAGACGATGTTCGTCACTTTTCATTAAATAGTTGACCAAATAATATGACCAAAAAGAGACGGATTTCCGAGCGGTTCATTCATCGACCGTAAACTAGGGCCACATTTGATTCTACAATATTTTCTTTATTAATCACTCCATATTCTTTCATTTCCATGTAAAGATCATTTCCTTTCCGAGTACGTTCACCCACTCTGCCAAATACGGATACGCCCCCGTGAGCTTTAGCAATATTGTTAATAAATTCCATAATGAGTACTGTTTTACCCACTTCAGCTCTCCCGAATAGTCCAATTTTTCCTCCACGGCGATAAGGGGCTAAAATATCTACTACTTTAATTCCTTTTTCAAAAATAGATAATTTTGTATCCAACTGTATAAAGGCGGGCGCAGATCTATGAATAGGAGACGTTCTACTAGTATCTACAGGCCCTAAATTATCAACAGGCTCTCCGAGCACGTTAAAAATTCGTCACAGAGTCGCTCCCCCTACTGGAACACTTATGAAGCTCCTATCTCAATAACCGTCATTCCTCTCGTTAGACCGTCTATAGCACTCATAGATACAATACTAACTTGATTATTTCCTAATAATTATTGTACCTCACAAGCCATATTAATTGGTTGATCAACACTATCTCAACTTTGACTACCAGAGCGTTATAAGTATTTGACATCTTGCCCTGGGGAAAGGCTACATCTAGTACCGGCCTGAGATTTGGGCGACATGCCCCAGGTTTTTTTTTCAAGTGTGGAAACCCCAGAACCAAAACTAGTAGGATTAATTCTCATAAAATAAAATAAATATGTCAAAATATTTTTTTCAAAATTATCGAATTCAAAATAAATGTCCGCTAGCACATCGATCGGTTAATTCCATAAAATTGGAATTAGCACTTGATTTCATTGGCACCATGCAACTAAACCAATCCAATTATTTACTTATTCAATGAGACTTGAGTCAATTTGGCAGCTCACCCAACCTTTTTTCATTTAAAAATCTCAAGTGGATGAATCAGTATCTTGAGAAAGTCCTTCATTTGTCTACCATTATAGATAAGTCCATCCATATTATCGATTCTATGGAATTCGAATCTGAACTTTATTTTCTATTTCTATTACGATTCATTATTTGTATCTAATGGGCTCCTCTTCTTATTTCTTTTTTATTTCAATTGCAGCATATCGATTTATGCCTAGCCTATTCTTTTCTTTGTGTTTTTCTTTCTTTTTTATACCTTTCATAGATTCATAGAGAAATTTCATATATTTTAACATCTAGGATTTACATATACAACATACACCACCGTCAAGGGGGAAGTTCTTATTATTTAGGTTAGCTAGGTATTTTCATTTTAAAAAAAGGTAAAAAAATAAAATTGGGTTGTGCTATATATATGAAAGAGTATACAATAATGATGTATTTGGCAAATCAAATACCATGGTCTAATAATCAACCATTCTAATTAATTGATAATATTAGTATTAGTTGAAAATTTTCTGAAAGATTCCTATGAAAAGTTTCATTAACTCAGAATTCATGTCGAGTAGACCTTGTTGTTGTGAGAATTTTTAATTCATGAGTTGTAGGGAGTGATTTATGTCACCACAAACAGAGCCTAAAGCAAGTATTGGATTCAAAGCTGATGTTAAAGAATAAAAATCGACTTATTATACTCCTGAATACCAAACCAAGGATACTGATATATTAGTAGCGTTCCGAGTAACTCCTCAACCTGGAGTTCCACCTGAAAAAGCAGGGGCCACGGTAGCTGCCGAATCTTATATTGGTACATGGACATCTGTATGGACCGATGGACTTACCAGTCTTGATCGTTACAAAGGGTGATGTTACAACATCAAGCGCGTTGTTGGAGAAAAAGATCAATATATTGCTTATGTATCTTACCCTTTAGACCTTTTTGAAGAAGGTTCCATTACCAATATGTTTACTTCCATTGTAGGTAACATATTTGGGTTCAAAGACCTGCACGCTCTACGTTTAGAAGATCTGCAAATCCATCCTTCTTACGTTAAAACTTTCCAAGGTCCACCTGATATACCGTGGTTTCGCAGTATTATTAATACTTTTTCCTTAAGTTTAGTGTGTCCAAAAGCCTTTTTGTTCTAATTTTTATATAAGTTTCTCTTTGTTTTGCATGAAATCTGTCCAAAGCTGAATGCGGAGATTTTGAGCGAAGAATTGCAGAAGAGACCACCTACGAAGCTTATGACGGTCCGTCGTTCTTGTTACGGTCCGTAGGTGGCAGCGTAATGCAGCTGCTGAAGGAAGATGGGGAAGTCTGACCAAGTGTGGGATTACGAAGCCTGTGACGATCCGTCGTGGGTATGACAGTCCGTCCTGTAGGTTCGTCGTGAAGTTCAGAGAAGTGATCCCAGTACCTAGATTCCAAGAGTTGAAGAGTTTTGGAACGAGACCCTCGACGGACAGTTGTACCTATGACGGTCCGTCATACTTGCAGTCGAGGGGAATGAAGATAACAATAGAAGAAATTGCATAAGTATGGGATGACGGAGTCCATGACGGTCCGTCGTGACCACGACGGATTCGTAGGGGATGCTTAGGGTACCCTTAGTTCTGTCACTGTTACTCAGAATAAGACCCCGATGACGGACTGTCGTACCTACAACGGACCGTCATAGGGTCCGTGTCAAAATCCCTAGCACCCTTGTCCCAACGGACACATGTGACGGATCGCCGTACTCGCGATGGTCCGTCCTGCACAACCGTCATGCTAGACAGAGACCCTGGTTCTAAGGGTATCACATTTTTTTCCTACGTGTTCCCCAACGGACACATGTGACGGACAGTCCGTCCTACATGACCCTCATAACGGTCAGAGACCCCTCTCCTAAGGGTCTCCATTTTTTTCTCAAGTGTCCTACGACGGACATATACGACGGACCGTTATACCTGTGACGGTCCGTCGTGCGCATACCATCATGCTATTCAGAGACTCTCTTTCATGGTTCTCTATATATTTATAGTCTAAGTAAAACACAACGGACCTCACGACGGTCCGTCATAGTCACGACGAGCCGTCACCTGGCCCGTCGTGTGTCACTGCTTCTACAGCAATGACATACTATTTTTAATGTTTTATTTCGTATGGTTTCGCTTGTCTTGTTTGCCACTACTCGTACTAATATTGATCCTTTGCAGGTACTATCTACTATGGCACCCAAGCAAGACCGAAGCTACGCACGCGGGCGATCAAAGTCTGTCGCCCTGTCTGCACACATGATCATCGGCTCTGATGATGAGCGAGACCCTGAGTATATGCCCCCAGGCACTTCCACACCTTCCCGTGCTGCACGTGCTCCAAGAGTCACACCCAAAAAGGTTGCATCCGGCGTAGTCACTGCTTCCCAGTCTGATGAGGAGCGCACACTAACCGGCACACCCTCTGGGTAAGCCACAAATGAGGAAGGAGCATCTGGCTCCTTGGGAGTATCCTTGTCCGAGGAAGCCTCTGACTCTGCTGAGGTTCCCGCCCCCGCCACTGCTGCAGCGTCGGCCTCGTCTGATGAAACTGGCAGTTCAGACTCTACATCCGGCTCACCAGCTCAGGTCCCCACGCCAGCCACTGACCAGCCCAACCGGTGGTGAGTCGACGGGCAATTTCAAGTCTACTCTGACGCCAAGTTCCTGACTGATAAAGGAGTGATGACTCGAACACTCTTCTTGGAGCGGCGGGTACTTACAGGGAGTCTACCAACAATGCCGGAGATCCACAACGTCTTCACCAAGCATTGCTTAGAGTGGACAGCACGTCCGTTGGGATGATACAACGAGGAAATGGTCCCAGAGTTCTACGCATCCTACGTAGTGACTTTCCGATCACTGATCGATAGGGGGGATGCCCCTGCTAAACAGGCCCCACTGAAGCAGGTTCGAGTCCGTGGTGTGCAGGTTGACATTTTCCCGCCAGCCATCCGCCGGTTTCTATATGGTGAGAGTGCAGATGCTACTCGGACCCCCATCACTGCCGAGTTTGACTACCGCTGGCAGATAGTAAAGGATGGACAGTTCTTGCGCGAGTCAGCACTGAGAGAAACCACCAAGAGGTGGATGGCCCTGCACGTGTTAGTATATGGAGAGGGTGCCGATTGGGTGACTGAGCCAAAGGGGGCCATCAAAAAGGCCAACCTCACATTCACAACAAAGTTCCTGTGGCTGCTTGTCCGGCACAGACTTTCCCCCACAGCTGCTGATGACATAGTTACCTGGGATCGAGCAGTGTTGATGGCGGCGATGATAGCCAGATTAGAGGTGGACTTCGCATGGCTTCTCCAGGCAGTCATGCACGAGAGGGCACTCAAGGTCACTACTACCTACCCTTTCTCGTGCATGATCTTTACCCTTTGCAAGTCCGCAGGTGTGCCCATATGGCACGTAGATCAGCTTAAGACCCCGCAGGGAACTGTAGACGTCGGCCTCATCAGAGACGAGGCCAATGAGTTGGCTCCACGCAGAGGGCCCCGTCCAGAGCTGCCCCCACTTGCTCATGATCTTGCTGATACGGTAGCCCAGGCTTGCACAGCTACACAGCGTCCACTGACACTACCCCGGTCGAGTCTATCCCGGGTAGTAGCACATCCCCGAGCTCCTCTCGCACAGCCCCTCTACCGACACAGGTCCCGCTTGCTAGGGTCCAATAACTAGAGGCACAAATGGCCACTCTTCTGCATCATATCCAGGCGTGGATGCAGAGGTCGATTACTGAGTCCGAAGAGCGTCTTGAGAGGAAGATGAAGCAGTTTACAGAACGGAAGATCGCTGAGGTTAACTAGCGTCTGGACGCCTTTGAGTTGATAGTGCTAGCCCGACCAGCCCCTCCGGTGGATGTGTCGACTCTTCAGGCTGCAGTTGACACTCTTCGTGCAGACATCGACACGATCTTAGAGGCTAGGGTGCCGGAGCCTGCGGCCCCTTCTGTCGAGCCTGCTGAGGACACCGTGTTGGCAGCCCTTTTTGCTACTTCAGAAGTTCCACCACCTCCCCCTCGACAGAGTGCCAAGAGGCGTAGGGGTCGAGTAGAGGACGAGGCGCGAGCAAGGAAGAAGGAGCGCCGAGAGATGGAGGCTGCGCGGAGAGCCTCCCTTGCTGAGGAGGAGGCAAACCGCATGAGAGCATCTGAGTTAGAGGCTGGGGCGTCTAGCTCCCGCACTGTGGAGATAGCAGGAGGCACTACTGATGGTGCGGTTGTTGCTGAAGACACCACTGAGGGTGTCCAGATTGTAGAGAACGTGGGTTCCGAGGAACCGGACCCACCATCTTGCT-GATCGACGGCGCTTTGCGCCACAGGTTTGCTTCACCTACCACTCTTGTATTTAGA-TTTTTATGCATTGGGGACAATTGCATGCCTTTTTGTTGGGGGTGGGGTAAATGGATAGTGAGTGTAAGGGTGAAGTCTGAGTAGCCCAATTCACTATCCTCTTTTGGGGTTTTCTTGGCTGTGTTCTTTTTCCCCAAAAGACTGATTACTTTTTCTGTTGAACCGGCATGTTTATATCTTTT</genome_strand>
        <mrna_strand>CCCCCTCGAGAGAGTGCCAAGAGGCGTAGGGGCCGATCAGAGGATGAGGCACAAGCAAAGAAGAAGGAGCGCCGAGAGATGGAGGCTGCGAGGAGAGCCT--C--GCTGAGACGGAGGCACACCAAATCAGAGCATCGCAGATAGCGGATGGGGCGTCTAGCTCCCGCACTGTAGAGATAGCAAGAGGCACTACTGATGGTGCGGTTGTTGCTGAGGACATCACTGAGGGTGTCCAGATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGGACACCACTGAGGGTGTCCAGATTGCAGAGGATGTGGGTTCCAGGAAACCGGACCCACCATCTTGTTAAATCGACGGTGCTTTGCGCCACAGGTTTGCTTCACCTACCACTCTAATATTTAGATTTTTTATGCATTGGGGACAGTTGCATGCTTTTTTGTTGGGGGTGGGGTAAATGGAAAGTGAGTGTTAGGGTGAAGTCTGAGTAGCCCAACTCACTATCCTCTTTTGGGGTTTTCTTGCCTGTGTTCTTTTTCCCCAAAAGACTGATTACTTTTTTTGTTGAACCGACACG-TTATATATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335936" ref_strand="+" ref_description="SGN-U335936        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-62, score=215)">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="-" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="16781" stop="15521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16481" g_stop="15821" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="-" ref_id="SGN-U335936" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16481" e_stop="15821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTTTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCCTGTGACTTTTATGGAGAGCAATACTCATATAGACCTGGTTATCTTAGAAATGGTTGATTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCAAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGGGACAGAGCCGTTAGTGTGGGATGGTGACTACACTTCCACTCCAGTTCATATCATCTCCTTGATTCGTGCTAAGAGAATGGTTAGAAAGGGTTGTTTAGATTTCTTAGCACACCTCAGGGATGATACTACCCAAGTACCTTCGATTGAGTCGGTTTCAATAGTCTGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACTGGATAGGGATATCAACTTTTGTATTGATCTGGAGACGGGTACTCGCCCCATTTCCATACCCCCTTATAGGATGACTCCCGCTGAGTTAAGAGAATTAAAGGCCCAACTTCAAGAGTTGTTAAGCAAAGTCTTTATTAGACCAAGTGCATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTG-TTCTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGTGG-GAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334737" ref_strand="+" ref_description="SGN-U334737        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>cgagggtctttgttctaatacacttcaactcttggaatttgggtactgggatcacttctctgaacttcacgacgaacctgcaggacggaccgtcagatccacgacggaccgtcacaagcttcgtaatcccacacttagtcagacttccctatcttccttcagcagctgcactacgcttccacctacggaccgtcacaagcacgacggaccgtcataagctccgtaggtggtttcttctgcatttcttcgctcaaaatctccgcattcagctttggacagatttcctgcaaaacaaagagtaacttatataaaaattagcacaaaaaggcttttggacacactaagcttaaggaaaaagtattaataataccgtgaaaccacggtatatcaacaccctcaacttaaattagttgtttgtcctcaagcgacgcactatgactcactacacaatctttgtacaatagtatccatgttttatcctttgcaatcatttggctatcaatcccgattaatctcatcaaatctatgcatgctatcactattaggtttgaattttgtgggatcagaatatgacacagacttaccatgcactaacacctatcctcttcaatttctcaccgaggtgctaacaattctagtattgcaactagtgtcctcactataagacaaaatcctcctttttcacacagtgattttagtttgagtataaggattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="19991" stop="21305"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20291" g_stop="21005" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U334737" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20291" e_stop="21005"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGGTCTTCGTTACCAAATACTTCAACTCTTGGAATCTGGGTACTAGGATCACTTCTCTGATCTTCGTGACGAATCTGCAGGATGGACCATCATATCCATGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTTCTCTATGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCATTT-TTCGCTCAAAATCTCCGCATTCAGTTTTAGACAGATTTCCTGCAAAACAAAGAAAAACTTATATCAAAATTAGCACAAAAACGCTTTCGGACACAATAAACTTAAGGAAAAGGTATTAATTATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGAGATGCACTATGACTCACTACACAATCTTTGTACAATAGTATTCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCCACTAATCCCATCAAATTTATGCATACTATCACTATTAGGCTTGACTTTTGTGGGATTCGAATATGACACAGACTCACCATGCACTAACACCTATCCTCTTCAATTTCTTACCGAGGTGCTAATAATTCCGGTATTGCAACTAGTGTCCTCACTTTAGAACAAAATCCTCATTTTTCACACAATGATTTCAGTTTGAGTATAAGGATTAC</genome_strand>
        <mrna_strand>CGAGGGTCTTTGTTCTAATACACTTCAACTCTTGGAATTTGGGTACTGGGATCACTTCTCTGAACTTCACGACGAACCTGCAGGACGGACCGTCAGATCCACGACGGACCGTCACAAGCTTCGTAATCCCACACTTAGTCAGACTTCCCTATCTTCCTTCAGCAGCTGCACTACGCTTCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTTTCTTCTGCATTTCTTCGCTCAAAATCTCCGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGTAACTTATATAAAAATTAGCACAAAAAGGCTTTTGGACACACTAAGCTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTAGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACACAATCTTTGTACAATAGTATCCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTATGCATGCTATCACTATTAGGTTTGAATTTTGTGGGATCAGAATATGACACAGACTTACCATGCACTAACACCTATCCTCTTCAATTTCTCACCGAGGTGCTAACAATTCTAGTATTGCAACTAGTGTCCTCACTATAAGACAAAATCCTCCTTTTTCACACAGTGATTTTAGTTTGAGTATAAGGATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335078" ref_strand="+" ref_description="SGN-U335078        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 1e-06, score=56.6)">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="-" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="38039" stop="29838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30730" g_stop="30473" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30472" i_stop="30396" i_length="77">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30395" g_stop="30138" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="515" r_length="257" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="-" ref_id="SGN-U335078" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30730" e_stop="30473"/>
          <exon e_start="30395" e_stop="30138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGAGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACATTCCGGTACCACGATATAATATGGATCGGGTGTCACATTTCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCTGGTACCAGGATAGTATATGAGGATCGGAGTGTCACATTCCGACACAAGGATAGAATGTGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCAGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGTTAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACTAAGGGTTATGGTAACAGTAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCTGACACCAGGATAGAATATG.............................................................................GATC-GGGTGCCACGTTCCGGTGCCAGGATAGTATATTGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="33886" stop="35144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34186" g_stop="34844" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34186" e_stop="34844"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATTCTTCTTCTTTACAAACAAAACCGAAGCACCCCAAGGGGATGCACTTGGTCTAATAAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAAATCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCGAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACTACTGAAACCGACTCAATCGAAGGCACTTAAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTATCACAAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATGACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCAGCAAACAAGACCTATACACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317065" ref_strand="+" ref_description="SGN-U317065        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-84, score=314)">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="33955" stop="35312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34255" g_stop="35012" g_length="758"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U317065" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34255" e_stop="35012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATTCTTCTTCTTTACAAACAAAACCGAAGCACCCCAAGGGGATGCACTTGGTCTAATAAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAAATCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCGAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACTACTGAAACCGACTCAATCGAAGGCACTTAAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTATCACAAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATGACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCAGCAAACAAGACCTATACACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAGCATC</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCAC-AATCGAAAGATTACCTGTGATGACAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335930" ref_strand="+" ref_description="SGN-U335930        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 7e-35, score=150)">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="34565" stop="35722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34865" g_stop="35422" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U335930" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34865" e_stop="35422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAGCATCAGATGTTTCCGCTTAAGACCGCCCAGGGAAAGTGTAACAATGGGCCCTATCATTCGTCTGTCCGTTGCCCCTACCTTGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCTGTTTTGGTGACCA-CATTTCCTCGACCACCACGTCCTCCAGAATAACGGCCTCTGCCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTTAGAGAATTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335937" ref_strand="+" ref_description="SGN-U335937        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="42173" stop="43103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42473" g_stop="42803" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U335937" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42473" e_stop="42803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATAACAATCCAAGATTGCGAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAGTCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCTCCATAAAAGTCACAGGACAAGACCTATACACCTTATCAACTATCACACACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335077" ref_strand="+" ref_description="SGN-U335077        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>aataaagaaaatagaaagaacaagagagagaggaagaatcgaacgagaagggagaaacaaagcttggagaaaaatttgcttgcttgatcactaatcttcggtggaggtaggttatggttttcatgctttcatagtaaactcttaatagagaatgatatgtattggtagtattgtaaaccctgctatatgcttaattgtatgcatgcatgaacgtgattatataattgtgattatattaagcatgatgaagttattgaatcccaaatcttgataaaaatctaatctcttattaatgatgatgccttggtatagaagaaggcttgatgaataaaagtaatgggattgatgatgccttggtatagagaaggcctgatgatttacagaatgatattagtggatcggagtgtcacgtaccgacacatgcaggggatcgggtgtcacgaaccgacacgtagaattaggggatcgggtgtcacgaactggcacgtagaattaggggatcgggtgtcacgaaccggcacgtagattaggggatcaggtgtcacgaaccgacacgtagaattaggggatcgggtgtcacgaaccgacacgtagaattaggggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="-" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="66273" stop="65062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65973" g_stop="65362" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="-" ref_id="SGN-U335077" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65973" e_stop="65362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAAGAAAATAGAAAGAACAAGAGAGAGAGAGAGAATCGAACGAGAAGGGAGAAACAAAGCTTGGAGAAAAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCATGAATATGATTGTGTGATTGTGATAAGA-TGAGCATGACGAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATAGGATTGATGATGCCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATATTAGTGGATCGG-GTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGAT</genome_strand>
        <mrna_strand>AATAAAGAAAATAGAAAGAACAAGAGAGAGAGGAAGAATCGAACGAGAAGGGAGAAACAAAGCTTGGAGAAAAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTGCTATATGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATA--AAAATCTAATCT-C-TTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATAAAAGTAATGGGATTGATGATGCCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATATTAGTGGATCGGAGTGTCACGTACCGACACAT-G---CAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACTGGCACGTAGAATTAGGGGATCGGGTGTCACGAACCGGCACGTAG-ATTAGGGGATCAGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="68308" stop="69619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68608" g_stop="69319" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68608" e_stop="69319"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAATAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACTCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATAACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCATTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCAACAATGCGGGGAAGAGGACACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTTCTTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317064" ref_strand="+" ref_description="SGN-U317064        Tomato 200607 #1 [6 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 5e-64, score=248)">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccgggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagctgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgtcgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="69510" stop="71546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69810" g_stop="71246" g_length="1437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1437" r_length="1437" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U317064" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>1437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69810" e_stop="71246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGGCCGCCCAAGGAAAGCATAACAATGGCCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACTATTACCTCGACCACCACGCCCTCCAGAAAAATGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTGTAACTTGGTCGGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGCAGTGAAGACTGAATTGGTCGGACTGAGTAATTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTTCGAAGCCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCATTGCCGCTATCTGTAAGGCCGAGATCCGCAATTCTGACCTCAACCCCTTCATAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCGATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCACTATTGGTTGACACTCGATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACGAAACCATTCTACTATACCCATCTTGTGTAGTAACTCGTGACAGTCAACCAGAAAATCATAGGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATTTTCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCGTTTCCTCATTTTGCACTTGTTCAGTTTCCCCAT-CCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGGGGAGTTACTGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCGGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335932" ref_strand="+" ref_description="SGN-U335932        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|2190718|gb|AAB64397.1| beta-galactosidase [unidentified cloning vector](evalue: 3e-14, score=80.1)">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="70585" stop="71618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70885" g_stop="71317" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U335932" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70885" e_stop="71317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATTTTCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCGTTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGGGGAGTTACTGCCCTAGTATCAGATGGGCTAGGTGCTTGTCCTCTCCCTCTAGAGGACGTCCTCCCACGACCTCTTCCACGGCCCCTTGCCGCTGTTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335073" ref_strand="+" ref_description="SGN-U335073        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="-" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="71910" stop="71024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71610" g_stop="71324" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="-" ref_id="SGN-U335073" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71610" e_stop="71324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTTATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAAATTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACATCGGCCAGATAAGAAACAACTGAGCCAACCACTGGGGCTGTGG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGG-AAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346498" ref_strand="+" ref_description="SGN-U346498        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT4G25650.2 | Symbol: None | Rieske (2Fe-2S) domain-containing protein, similar to cell death suppressor protein lls1 from Zea mays (gi:1935909), Rieske iron-sulfur protein Tic55 from Pisum sativum (gi:2764524); contains Pfam PF00355 Rieske (2Fe-2S) domain | chr4:13080914-13083206 REVERSE | Aliases: None (evalue: 4e-32, score=135) genbank/nr: gi|18416592|ref|NP_567725.1| Rieske [2Fe-2S] domain-containing protein [Arabidopsis thaliana] gi|15810259|gb|AAL07017.1| unknown protein [Arabidopsis thaliana] gi|15983402|gb|AAL11569.1| AT4g25650/L73G19_30 [Arabidopsis thaliana] gi|37962888|gb|AAR05798.1| LLS1-like protein [Arabidopsis thaliana](evalue: 3e-30, score=135)">
      <seq>tttctacttgttttccaccatttcacttcaacttgaaaaccggtagaggggcaagaattatatgtgagaagaaaccaaacttttctttttctctaaatcatcaacaaccccacaagtcaagattcaatcttttcactaccaatatttttaattcaactaatgaaccacaacaactaccttccaaatgaatgaacaagaaattagtactaaaaatgaaaaaaatcaagaaaaagagaaatttgattggtatgcacaatggtatccaataatgccactaagtgaacttgataagaaaaagccacatgggaaaaaagtgatgggaattgatttggtagtgtggtgggataaaaatttggaggaatggagagtgatggatgatgcttgttctcatagattggctccactttctcaagggagaattgatcaatggggaagaattgcaatgtgtatatcatggttggtgttttagtggctctggtgattgcaagttcattcctcaagctcctagagacaagcctcatgttcacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="74498" stop="75616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74798" g_stop="75314" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="521" r_length="521" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U346498" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74798" e_stop="75314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTACTTGTTTTCCACCATCTCACTTCAACTAGAAAACACCTAAATTTTCAAGAATTATATGTGAGAAGAAACCAAACTTTTCTTTTTCTCTAAATCAT---CAACTCCACAATTCAAGATTCAATCTTTTCACTACTACTTATATTTTAAATTCAACTAGTGAACCACAACAACTA-CTTCCAAATG-ATGAACAAGAAATTAGTACTAAAAATG-AAAAAATCAAGAAAATGAGAAATTAGATTGGTATGAACAATGGTATCCAATAATGCCACTAAATGAGCTTGATAAGAGAAGGCCACATGGGAAAAAAGTGATGGGAATTGATTTGGTAGTGTGGTGGGATAAAAATTTGGAGGAATGGAGAGTGGTGGATGATGCTTGTTCTCATAGATTGGCTCCACTTTCTCAAGGGAGAAGTGATCAATGGGGAAG-ATTGCAATGTGTGCATCATGGTTGGTGTTTTAGTGGTTATGGTGATTGCAAATTCATTCCTCAAGCTCCTCGAGACAAGCCTCCT</genome_strand>
        <mrna_strand>TTTCTACTTGTTTTCCACCATTTCACTTCAACTTGAAAACCGGTAGAGGGGCAAGAATTATATGTGAGAAGAAACCAAACTTTTCTTTTTCTCTAAATCATCAACAACCCCACAAGTCAAGATTCAATCTTTTCACTAC--C-AATATTTTTAATTCAACTAATGAACCACAACAACTACCTTCCAAATGAATGAACAAGAAATTAGTACTAAAAATGAAAAAAATCAAGAAAAAGAGAAATTTGATTGGTATGCACAATGGTATCCAATAATGCCACTAAGTGAACTTGATAAGAAAAAGCCACATGGGAAAAAAGTGATGGGAATTGATTTGGTAGTGTGGTGGGATAAAAATTTGGAGGAATGGAGAGTGATGGATGATGCTTGTTCTCATAGATTGGCTCCACTTTCTCAAGGGAGAATTGATCAATGGGGAAGAATTGCAATGTGTATATCATGGTTGGTGTTTTAGTGGCTCTGGTGATTGCAAGTTCATTCCTCAAGCTCCTAGAGACAAGCCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345909" ref_strand="+" ref_description="SGN-U345909        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 1e-29, score=133)">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="+" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="94825" stop="95602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95125" g_stop="95301" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="+" ref_id="SGN-U345909" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95125" e_stop="95301"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAAGGCTTCAAATGGGGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGACCACCAAACACTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335938" ref_strand="-" ref_description="SGN-U335938        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-59, score=231)">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="-" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="98922" stop="41753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98622" g_stop="98450" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98449" i_stop="97706" i_length="744">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.084" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97705" g_stop="97178" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="-" ref_id="SGN-U335938" ref_strand="-">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335938" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98622" e_stop="98450"/>
          <exon e_start="97705" e_stop="97178"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATATCGGTTAATGCTTATGAGGCTAAGTTTCGTGCGCTATCCAGATATGCCACTCAACTCTGTTTCAGTCCTCAAGAGCGGATTCGCCAGTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTCAGCCTTACAGATAGCGGCAACGGCAAAATCCTTCCAAGAGGTGGTAGACTTTGTGATAGAAGTGGAAGGAGTGAAGCCAGATGACTTCACCACAACACCGACATTAAAAAGGCTTCGAAAGGGAGGTGAGTTTAATGGTCCTTACACTAGAGGACAAGGTTCGGGAAGTTACTCAGTCCGACCAATTCAGTCTTCACTACAGACTGTAGTTGGGGGACCACCTCAGACCGGTCAACACTTCTCCGAGGGGCATATGATCGACTCCAAAGAATGTTATGGATGTGGGGAGATTGGACATATTAGGAGAAATTGTCCCAGACCAAGTTACAGACCCCCAATAACTAGAGGTGAAGGTGGTCATGGTAGAGACCGTTTTTCTGGAGGGCGTGGTGGTCGAGGTAATAGTGGTCACCAAAACGGCAGAGGTAATGGGCAAACTGGGGCCACTACATCACAACATGGTAGGGGCAACGGACAGACAAATTATAGGGCCCATTGTAACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCATGGATCCACGTTTTCTCATGTATCTTACTCATTTTCTAATGGTCTAAATTTACATTGTGAATTACTTGATATGCCTATCCGTGTCTCTACTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGATATATAGGTCTTGTTTGGTAAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGATGATTTTGACGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCAGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACTGGATAGCGATATTGACTTCTGTATTGATCTTGAACCCCGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAGGAGAGTTAAAAGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCAGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340801" ref_strand="+" ref_description="SGN-U340801        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|4567266|gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana] (evalue: 7e-11, score=47.4)">
      <seq>aattctgctttgcttcttgcccaattcctcaagataatctgccatccatatcatctctttcccagcttcagctattgccacaaactcagctttagtggatgaaagagaaacatacttctaaagacacggacatccaacttactgcttttccacctatggtgtaaatgtacccggacgtactcttgctcgagtcaacatccccaccaagatcagcatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0304E04-jlojP/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0304E04.1" temp_strand="-" temp_description="C04HBa0304E04.1  CU915750.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0304E04 sequenced_by:sanger upload_account_name:uk">
        <position start="107603" stop="106788"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107305" g_stop="107088" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0304E04.1" gen_strand="-" ref_id="SGN-U340801" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>218</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0304E04.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U340801" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107305" e_stop="107088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTCGCTCTGCTTCTTGCTCAATTCCTCAAGATAATCTGCCAGCCATATCATCTCTTTCCCAGCTTCAGCTATTGTCACATACTCAGCTTTAGTAGATGAAAGAGAAACACACTTCTAAAG-CCTGGACATCCAACTGACTGCTGTTCCACCTATGCTGTAAATGTGCCCAGATGTACTCTTGCTCGAGTCAACATCCCCACCAAGATCAACATCC</genome_strand>
        <mrna_strand>AATTCT-GCTTTGCTTCTTGCCCAATTCCTCAAGATAATCTGCCATCCATATCATCTCTTTCCCAGCTTCAGCTATTGCCACAAACTCAGCTTTAGTGGATGAAAGAGAAACATACTTCTAAAGACACGGACATCCAACTTACTGCTTTTCCACCTATGGTGTAAATGTACCCGGACGTACTCTTGCTCGAGTCAACATCCCCACCAAGATCAGCATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>17</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="22553" PGL_stop="713"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22553" e_stop="22314"/>
            <exon e_start="1022" e_stop="713"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.904"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="22553" e_stop="22314" e_length="240"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22313" i_stop="1023" i_length="21291"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="1022" e_stop="713" e_length="310"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22553" stop="22314"/>
              <exon start="1022" stop="713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341497" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCCGAGAGAGAGTGCCAAGAGGCGGAGGGGTCGATCAGAGGATGAGGCGCGAGCAAGAAAGAAGGAGCGCCGAGAGATGGAGGCCGCGAGGAGAGCCTCACTTACTGAGGCGGAGGCACACCAGATCAGAGCATCACAGATAGCGGCTGGGGCGTCTAGCTCCCGCACTGTAGAGACAGCAGGAGGCACTACTGAGGGTGCAGTTGTTGCTGAGGACATCACTGAGGGTGTCCAGATT : GCTGAAGACACCACTGAGGGTGTCCAGATTGTAGAGAACGTGGGTTCCGAGGAACCGGACCCACCATCTTGCTGATCGACGGCGCTTTGCGCCACAGGTTTGCTTCACCTACCACTCTTGTATTTAGATTTTTATGCATTGGGGACAATTGCATGCCTTTTTGTTGGGGGTGGGGTAAATGGATAGTGAGTGTAAGGGTGAAGTCTGAGTAGCCCAATTCACTATCCTCTTTTGGGGTTTTCTTGGCTGTGTTCTTTTTCCCCAAAAGACTGATTACTTTTTCTGTTGAACCGGCATGTTTATATCTTTT</gDNA_template>
            <first_frame> S  P  R  E  S  A  K  R  R  R  G  R  S  E  D  E  A  R  A  R  K  K  E  R  R  E  M  E  A  A  R  R  A  S  L  T  E  A  E  A  H  Q  I  R  A  S  Q  I  A  A  G  A  S  S  S  R  T  V  E  T  A  G  G  T  T  E  G  A  V  V  A  E  D  I  T  E  G  V  Q  I  :  A  E  D  T  T  E  G  V  Q  I  V  E  N  V  G  S  E  E  P  D  P  P  S  C  *  S  T  A  L  C  A  T  G  L  L  H  L  P  L  L  Y  L  D  F  Y  A  L  G  T  I  A  C  L  F  V  G  G  G  V  N  G  *  *  V  *  G  *  S  L  S  S  P  I  H  Y  P  L  L  G  F  S  W  L  C  S  F  S  P  K  D  *  L  L  F  L  L  N  R  H  V  Y  I  F  </first_frame>
            <second_frame>  P  R  E  R  V  P  R  G  G  G  V  D  Q  R  M  R  R  E  Q  E  R  R  S  A  E  R  W  R  P  R  G  E  P  H  L  L  R  R  R  H  T  R  S  E  H  H  R  *  R  L  G  R  L  A  P  A  L  *  R  Q  Q  E  A  L  L  R  V  Q  L  L  L  R  T  S  L  R  V  S  R  L :   L  K  T  P  L  R  V  S  R  L  *  R  T  W  V  P  R  N  R  T  H  H  L  A  D  R  R  R  F  A  P  Q  V  C  F  T  Y  H  S  C  I  *  I  F  M  H  W  G  Q  L  H  A  F  L  L  G  V  G  *  M  D  S  E  C  K  G  E  V  *  V  A  Q  F  T  I  L  F  W  G  F  L  G  C  V  L  F  P  Q  K  T  D  Y  F  F  C  *  T  G  M  F  I  S  F </second_frame>
            <third_frame>   P  E  R  E  C  Q  E  A  E  G  S  I  R  G  *  G  A  S  K  K  E  G  A  P  R  D  G  G  R  E  E  S  L  T  Y  *  G  G  G  T  P  D  Q  S  I  T  D  S  G  W  G  V  *  L  P  H  C  R  D  S  R  R  H  Y  *  G  C  S  C  C  *  G  H  H  *  G  C  P  D   : C  *  R  H  H  *  G  C  P  D  C  R  E  R  G  F  R  G  T  G  P  T  I  L  L  I  D  G  A  L  R  H  R  F  A  S  P  T  T  L  V  F  R  F  L  C  I  G  D  N  C  M  P  F  C  W  G  W  G  K  W  I  V  S  V  R  V  K  S  E  *  P  N  S  L  S  S  F  G  V  F  L  A  V  F  F  F  P  K  R  L  I  T  F  S  V  E  P  A  C  L  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22553" stop="22314"/>
                    <exon start="1022" stop="948"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPRESAKRRRGRSEDEARARKKERREMEAARRASLTEAEAHQIRASQIAAGASSSRTVETAGGTTEGAVVAEDITEGVQIAEDTTEGVQIVENVGSEEPDPPSC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="16481" e_stop="15821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="16481" e_stop="15821" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16481" stop="15821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335936" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGATCCTGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTTTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCCTGTGACTTTTATGGAGAGCAATACTCATATAGACCTGGTTATCTTAGAAATGGTTGATTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCAAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGGGACAGAGCCGTTAGTGTGGGATGGTGACTACACTTCCACTCCAGTTCATATCATCTCCTTGATTCGTGCTAAGAGAATGGTTAGAAAGGGTTGTTTAGATTTCTTAGCACACCTCAGGGATGATACTACCCAAGTACCTTCGATTGAGTCGGTTTCAATAGTCTGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACTGGATAGGGATATCAACTTTTGTATTGATCTGGAGACGGGTACTCGCCCCATTTCCATACCCCCTTATAGGATGACTCCCGCTGAGTTAAGAGAATTAAAGGCCCAACTTCAAGAGTTGTTAAGCAAAGTCTTTATTAGACCAAGTGCATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  G  S  T  F  S  Y  V  S  S  S  F  A  T  G  L  N  L  H  C  E  L  L  D  M  P  I  R  V  S  T  P  V  G  E  F  V  I  V  E  K  V  Y  R  S  C  P  V  T  F  M  E  S  N  T  H  I  D  L  V  I  L  E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  Q  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  E  P  L  V  W  D  G  D  Y  T  S  T  P  V  H  I  I  S  L  I  R  A  K  R  M  V  R  K  G  C  L  D  F  L  A  H  L  R  D  D  T  T  Q  V  P  S  I  E  S  V  S  I  V  C  E  F  L  D  V  F  P  A  D  L  P  G  M  P  L  D  R  D  I  N  F  C  I  D  L  E  T  G  T  R  P  I  S  I  P  P  Y  R  M  T  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  V  F  I  R  P  S  A  S  P  W  </first_frame>
            <second_frame>  L  I  L  D  P  H  F  H  M  Y  L  P  H  L  L  L  V  L  I  Y  I  V  N  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  R  C  I  G  L  V  L  *  L  L  W  R  A  I  L  I  *  T  W  L  S  *  K  W  L  I  S  M  *  F  W  V  *  L  G  F  L  K  I  L  Q  S  *  I  V  M  L  K  L  *  R  W  P  S  L  G  Q  S  R  *  C  G  M  V  T  T  L  P  L  Q  F  I  S  S  P  *  F  V  L  R  E  W  L  E  R  V  V  *  I  S  *  H  T  S  G  M  I  L  P  K  Y  L  R  L  S  R  F  Q  *  S  V  S  F  W  M  C  F  L  Q  T  F  L  V  C  H  W  I  G  I  S  T  F  V  L  I  W  R  R  V  L  A  P  F  P  Y  P  L  I  G  *  L  P  L  S  *  E  N  *  R  P  N  F  K  S  C  *  A  K  S  L  L  D  Q  V  H  P  L  G </second_frame>
            <third_frame>   *  S  W  I  H  I  F  I  C  I  F  L  I  C  Y  W  S  *  F  T  L  *  I  A  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  G  V  *  V  L  S  C  D  F  Y  G  E  Q  Y  S  Y  R  P  G  Y  L  R  N  G  *  F  R  C  N  S  G  Y  D  L  A  F  S  K  F  C  N  L  R  L  *  C  *  N  C  N  V  G  Q  A  W  D  R  A  V  S  V  G  W  *  L  H  F  H  S  S  S  Y  H  L  L  D  S  C  *  E  N  G  *  K  G  L  F  R  F  L  S  T  P  Q  G  *  Y  Y  P  S  T  F  D  *  V  G  F  N  S  L  *  V  S  G  C  V  S  C  R  P  S  W  Y  A  T  G  *  G  Y  Q  L  L  Y  *  S  G  D  G  Y  S  P  H  F  H  T  P  L  *  D  D  S  R  *  V  K  R  I  K  G  P  T  S  R  V  V  K  Q  S  L  Y  *  T  K  C  I  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16481" stop="15822"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDPGSTFSYVSSSFATGLNLHCELLDMPIRVSTPVGEFVIVEKVYRSCPVTFMESNTHIDLVILEMVDFDVILGMTWLSQNFAILDCNAKTVTLAKPGTEPLVWDGDYTSTPVHIISLIRAKRMVRKGCLDFLAHLRDDTTQVPSIESVSIVCEFLDVFPADLPGMPLDRDINFCIDLETGTRPISIPPYRMTPAELRELKAQLQELLSKVFIRPSASPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="20291" PGL_stop="21005"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20291" e_stop="21005"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="20291" e_stop="21005" e_length="715"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20291" stop="21005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334737" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAGGGTCTTCGTTACCAAATACTTCAACTCTTGGAATCTGGGTACTAGGATCACTTCTCTGATCTTCGTGACGAATCTGCAGGATGGACCATCATATCCATGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTTCTCTATGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCATTTTTCGCTCAAAATCTCCGCATTCAGTTTTAGACAGATTTCCTGCAAAACAAAGAAAAACTTATATCAAAATTAGCACAAAAACGCTTTCGGACACAATAAACTTAAGGAAAAGGTATTAATTATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGAGATGCACTATGACTCACTACACAATCTTTGTACAATAGTATTCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCCACTAATCCCATCAAATTTATGCATACTATCACTATTAGGCTTGACTTTTGTGGGATTCGAATATGACACAGACTCACCATGCACTAACACCTATCCTCTTCAATTTCTTACCGAGGTGCTAATAATTCCGGTATTGCAACTAGTGTCCTCACTTTAGAACAAAATCCTCATTTTTCACACAATGATTTCAGTTTGAGTATAAGGATTAC</gDNA_template>
            <first_frame> R  G  S  S  L  P  N  T  S  T  L  G  I  W  V  L  G  S  L  L  *  S  S  *  R  I  C  R  M  D  H  H  I  H  D  G  P  S  Q  A  S  *  S  H  T  W  S  D  F  P  I  F  L  Q  Q  L  L  Y  A  A  T  Y  G  P  S  Q  A  R  R  T  V  I  S  S  V  G  G  L  F  C  I  F  R  S  K  S  P  H  S  V  L  D  R  F  P  A  K  Q  R  K  T  Y  I  K  I  S  T  K  T  L  S  D  T  I  N  L  R  K  R  Y  *  L  Y  R  E  T  T  V  Y  Q  H  P  Q  L  K  F  V  V  C  P  Q  E  M  H  Y  D  S  L  H  N  L  C  T  I  V  F  M  F  Y  P  L  Q  S  F  G  Y  Q  S  P  L  I  P  S  N  L  C  I  L  S  L  L  G  L  T  F  V  G  F  E  Y  D  T  D  S  P  C  T  N  T  Y  P  L  Q  F  L  T  E  V  L  I  I  P  V  L  Q  L  V  S  S  L  *  N  K  I  L  I  F  H  T  M  I  S  V  *  V  *  G  L  </first_frame>
            <second_frame>  E  G  L  R  Y  Q  I  L  Q  L  L  E  S  G  Y  *  D  H  F  S  D  L  R  D  E  S  A  G  W  T  I  I  S  M  T  D  R  H  K  L  R  N  P  T  L  G  Q  T  S  P  S  S  F  S  S  F  S  M  L  P  P  T  D  R  H  K  H  D  G  P  S  *  A  P  *  V  V  S  S  A  F  F  A  Q  N  L  R  I  Q  F  *  T  D  F  L  Q  N  K  E  K  L  I  S  K  L  A  Q  K  R  F  R  T  Q  *  T  *  G  K  G  I  N  Y  T  V  K  P  R  Y  I  N  T  L  N  L  N  S  L  F  V  L  K  R  C  T  M  T  H  Y  T  I  F  V  Q  *  Y  S  C  F  I  L  C  N  H  L  A  I  N  P  H  *  S  H  Q  I  Y  A  Y  Y  H  Y  *  A  *  L  L  W  D  S  N  M  T  Q  T  H  H  A  L  T  P  I  L  F  N  F  L  P  R  C  *  *  F  R  Y  C  N  *  C  P  H  F  R  T  K  S  S  F  F  T  Q  *  F  Q  F  E  Y  K  D  Y </second_frame>
            <third_frame>   R  V  F  V  T  K  Y  F  N  S  W  N  L  G  T  R  I  T  S  L  I  F  V  T  N  L  Q  D  G  P  S  Y  P  *  R  T  V  T  S  F  V  I  P  H  L  V  R  L  P  H  L  P  S  A  A  S  L  C  C  H  L  R  T  V  T  S  T  T  D  R  H  K  L  R  R  W  S  L  L  H  F  S  L  K  I  S  A  F  S  F  R  Q  I  S  C  K  T  K  K  N  L  Y  Q  N  *  H  K  N  A  F  G  H  N  K  L  K  E  K  V  L  I  I  P  *  N  H  G  I  S  T  P  S  T  *  I  R  C  L  S  S  R  D  A  L  *  L  T  T  Q  S  L  Y  N  S  I  H  V  L  S  F  A  I  I  W  L  S  I  P  T  N  P  I  K  F  M  H  T  I  T  I  R  L  D  F  C  G  I  R  I  *  H  R  L  T  M  H  *  H  L  S  S  S  I  S  Y  R  G  A  N  N  S  G  I  A  T  S  V  L  T  L  E  Q  N  P  H  F  S  H  N  D  F  S  L  S  I  R  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20654" stop="20953"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYRETTVYQHPQLKFVVCPQEMHYDSLHNLCTIVFMFYPLQSFGYQSPLIPSNLCILSLLGLTFVGFEYDTDSPCTNTYPLQFLTEVLIIPVLQLVSSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20417" stop="20653"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHTWSDFPIFLQQLLYAATYGPSQARRTVISSVGGLFCIFRSKSPHSVLDRFPAKQRKTYIKISTKTLSDTINLRKRY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20395" stop="20607"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTVTSFVIPHLVRLPHLPSAASLCCHLRTVTSTTDRHKLRRWSLLHFSLKISAFSFRQISCKTKKNLYQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="30730" PGL_stop="30138"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30730" e_stop="30473"/>
            <exon e_start="30395" e_stop="30138"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.957"/>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="30730" e_stop="30473" e_length="258"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="30472" i_stop="30396" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="0.919">
            <gDNA_exon_boundary e_start="30395" e_stop="30138" e_length="258"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30730" stop="30473"/>
              <exon start="30395" stop="30138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335078" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGAGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACATTCCGGTACCACGATATAATATGGATCGGGTGTCACATTTCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCTGGTACCAGGATAGTATATG : GATCAGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGTTAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACTAAGGGTTATGGTAACAGTAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACT</gDNA_template>
            <first_frame> P  N  L  L  C  *  *  *  C  L  G  I  K  E  G  L  M  N  E  S  G  E  I  R  G  S  S  A  T  F  R  Y  Q  D  R  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  P  H  S  G  T  T  I  *  Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  L  V  P  G  *  Y  M  :  D  Q  S  V  T  F  R  H  Q  D  S  I  L  R  S  G  V  S  R  T  D  T  R  G  I  K  I  M  N  L  E  I  C  *  Y  I  Q  S  N  E  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  L  R  V  M  V  T  V  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  I  H  T </first_frame>
            <second_frame>  L  I  Y  F  V  N  D  D  A  L  V  *  K  K  A  *  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  E  Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  I  P  V  P  R  Y  N  M  D  R  V  S  H  F  D  T  R  I  E  Y  G  S  G  A  T  F  W  Y  Q  D  S  I  W :   I  R  V  S  R  S  D  T  R  I  V  Y  *  G  A  E  C  H  V  P  T  R  G  E  *  R  *  *  I  L  K  Y  V  N  I  S  N  L  M  N  *  I  P  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  *  G  L  W  *  Q  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  A  *  Y  I   </second_frame>
            <third_frame>   *  S  T  L  L  M  M  M  P  W  Y  K  R  R  L  D  E  R  K  W  *  D  *  G  I  E  C  H  V  P  V  P  G  *  N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  H  D  I  I  W  I  G  C  H  I  S  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  V  Y   : G  S  E  C  H  V  P  T  P  G  *  Y  I  E  E  R  S  V  T  Y  R  H  E  G  N  K  D  N  E  S  *  N  M  L  I  Y  P  I  *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  S  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30678" stop="30473"/>
                    <exon start="30395" stop="30356"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKVVRLGDRVPRSGTRIEYGSGVTFRHQDRIWIGCHIPVPRYNMDRVSHFDTRIEYGSGATFWYQDSIWIRVSRSDTRIVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="34186" PGL_stop="35422"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34186" e_stop="35422"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="34186" e_stop="35422" e_length="1237"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34186" stop="34844"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34255" stop="35012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34865" stop="35422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335930" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATTCTTCTTCTTTACAAACAAAACCGAAGCACCCCAAGGGGATGCACTTGGTCTAATAAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAAATCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCGAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACTACTGAAACCGACTCAATCGAAGGCACTTAAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTATCACAAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATGACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCAGCAAACAAGACCTATACACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAGCATCAGATGTTTCCGCTTAAGACCGCCCAGGGAAAGTGTAACAATGGGCCCTATCATTCGTCTGTCCGTTGCCCCTACCTTGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCTGTTTTGGTGACCACATTTCCTCGACCACCACGTCCTCCAGAATAACGGCCTCTGCCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTTAGAGAATTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCATTAAACTCACC</gDNA_template>
            <first_frame> S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  F  F  F  F  T  N  K  T  E  A  P  Q  G  D  A  L  G  L  I  K  P  L  F  N  N  S  *  S  C  A  F  K  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  *  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  S  Q  R  K  E  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  M  T  K  S  T  *  V  L  L  P  T  K  F  S  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  V  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  K  R  L  P  V  M  T  A  S  D  V  S  A  *  D  R  P  G  K  V  *  Q  W  A  L  S  F  V  C  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  S  P  R  L  F  W  *  P  H  F  L  D  H  H  V  L  Q  N  N  G  L  C  H  D  H  L  Y  L  *  H  L  E  V  C  N  S  V  L  D  N  I  S  *  Y  V  Q  S  P  H  I  H  S  T  L  W  V  H  A  *  V  S  *  R  I  V  D  R  S  E  V  D  P  Q  L  Q  S  V  V  K  T  E  L  V  G  L  S  N  L  R  N  L  V  L  *  S  K  N  H  *  T  H  </first_frame>
            <second_frame>  Q  C  G  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  Y  T  F  E  N  S  H  S  S  S  L  Q  T  K  P  K  H  P  K  G  M  H  L  V  *  *  S  L  C  S  I  T  L  E  V  V  P  L  N  L  L  T  L  R  E  P  F  Y  K  G  V  *  K  W  G  V  C  P  V  R  D  R  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  L  L  K  P  T  Q  S  K  A  L  K  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  Y  H  K  E  R  R  *  Y  A  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  C  C  S  P  Q  S  S  A  N  K  T  Y  T  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  A  Y  Q  V  I  H  N  V  K  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  K  D  Y  L  *  *  Q  H  Q  M  F  P  L  K  T  A  Q  G  K  C  N  N  G  P  Y  H  S  S  V  R  C  P  Y  L  V  V  M  *  W  L  Q  F  A  H  H  L  G  C  F  G  D  H  I  S  S  T  T  T  S  S  R  I  T  A  S  A  M  T  T  S  T  S  N  I  W  R  S  V  T  L  F  W  T  I  S  L  N  M  S  N  L  P  T  S  I  A  L  S  G  F  M  H  R  S  L  R  E  L  L  T  G  R  R  W  T  P  N  Y  S  L  *  *  R  L  N  W  S  D  *  V  T  S  G  T  L  S  S  R  V  R  T  I  K  L  T </second_frame>
            <third_frame>   N  A  G  K  R  I  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  G  C  T  W  S  N  K  A  F  V  Q  *  L  L  K  L  C  L  *  I  S  *  L  C  G  S  H  S  I  R  G  Y  R  N  G  A  C  A  R  F  E  I  D  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  Y  *  N  R  L  N  R  R  H  L  S  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  I  T  K  K  G  D  D  T  H  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  D  Q  I  Y  I  S  V  A  P  H  K  V  Q  Q  T  R  P  I  H  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  I  K  *  F  T  M  *  S  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  F  R  L  R  P  P  R  E  S  V  T  M  G  P  I  I  R  L  S  V  A  P  T  L  L  *  C  S  G  S  S  L  P  I  T  S  A  V  L  V  T  T  F  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  T  F  G  G  L  *  L  C  F  G  Q  Y  L  L  I  C  P  I  S  P  H  P  *  H  S  L  G  S  C  I  G  L  L  E  N  C  *  P  V  G  G  G  P  P  T  T  V  C  S  E  D  *  I  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35102" stop="35350"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WLQFAHHLGCFGDHISSTTTSSRITASAMTTSTSNIWRSVTLFWTISLNMSNLPTSIALSGFMHRSLRELLTGRRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="42473" PGL_stop="42803"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42473" e_stop="42803"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="42473" e_stop="42803" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42473" stop="42803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATAACAATCCAAGATTGCGAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAGTCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCTCCATAAAAGTCACAGGACAAGACCTATACACCTTATCAACTATCACACACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  A  W  L  T  S  Q  F  *  H  N  N  P  R  L  R  N  L  E  K  A  K  S  Y  P  E  L  H  Q  S  Q  P  F  L  R  *  P  S  L  H  K  Y  C  S  P  *  K  S  Q  D  K  T  Y  T  P  Y  Q  L  S  H  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  I  H  N  L  I  *  D  Q  *  Q  M  R  K  I  H  M  K  M  W  I  Q  G  Q  I  I  Q  K  P  C  N  H  K  P  </first_frame>
            <second_frame>  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  C  E  I  W  R  K  P  S  H  T  Q  N  Y  I  K  V  N  H  F  *  D  N  Q  V  Y  I  S  I  A  L  H  K  S  H  R  T  R  P  I  H  L  I  N  Y  H  T  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  F  T  I  *  F  K  T  S  S  K  *  G  R  Y  I  *  K  C  G  S  R  V  K  *  Y  K  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   S  V  P  G  L  A  N  V  T  V  L  A  *  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  S  I  K  V  T  G  Q  D  L  Y  T  L  S  T  I  T  H  S  P  T  G  V  E  T  R  I  G  M  S  S  N  S  Q  F  N  L  R  P  V  A  N  E  E  D  T  Y  E  N  V  D  P  G  S  N  N  T  K  A  M  Q  S  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42604" stop="42801"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLLSIKVTGQDLYTLSTITHSPTGVETRIGMSSNSQFNLRPVANEEDTYENVDPGSNNTKAMQSQT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="65973" PGL_stop="65362"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65973" e_stop="65362"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="65973" e_stop="65362" e_length="612"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65973" stop="65362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335077" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAAAGAAAATAGAAAGAACAAGAGAGAGAGAGAGAATCGAACGAGAAGGGAGAAACAAAGCTTGGAGAAAAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCATGAATATGATTGTGTGATTGTGATAAGATGAGCATGACGAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATAGGATTGATGATGCCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATATTAGTGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGAT</gDNA_template>
            <first_frame> N  K  E  N  R  K  N  K  R  E  R  E  N  R  T  R  R  E  K  Q  S  L  E  K  N  L  L  A  *  S  L  I  F  G  G  G  R  L  W  F  S  C  F  H  S  K  L  L  I  E  N  D  M  Y  W  *  Y  C  K  P  Y  Y  M  L  N  C  M  F  A  *  I  *  L  C  D  C  D  K  M  S  M  T  K  I  L  N  P  K  S  *  K  E  T  L  I  Y  I  I  N  D  D  A  L  V  *  K  K  A  *  *  I  K  V  I  G  L  M  M  P  W  Y  R  E  G  L  M  I  Y  R  M  I  L  V  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D </first_frame>
            <second_frame>  I  K  K  I  E  R  T  R  E  R  E  R  I  E  R  E  G  R  N  K  A  W  R  K  I  C  L  L  D  H  *  S  S  V  E  V  G  Y  G  F  H  A  F  I  V  N  S  *  *  R  M  I  C  I  G  S  I  V  N  P  T  I  C  L  I  V  C  L  H  E  Y  D  C  V  I  V  I  R  *  A  *  R  K  Y  *  I  P  N  L  E  R  K  L  *  Y  T  L  L  M  M  M  P  W  Y  R  R  R  L  D  E  L  K  *  *  D  *  *  C  L  G  I  E  K  A  *  *  F  T  E  *  Y  *  W  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G   </second_frame>
            <third_frame>   *  R  K  *  K  E  Q  E  R  E  R  E  S  N  E  K  G  E  T  K  L  G  E  K  F  A  C  L  I  T  N  L  R  W  R  *  V  M  V  F  M  L  S  *  *  T  L  N  R  E  *  Y  V  L  V  V  L  *  T  L  L  Y  A  *  L  Y  V  C  M  N  M  I  V  *  L  *  *  D  E  H  D  E  N  I  E  S  Q  I  L  K  G  N  F  N  I  H  Y  *  *  *  C  L  G  I  E  E  G  L  M  N  *  S  N  R  I  D  D  A  L  V  *  R  R  P  D  D  L  Q  N  D  I  S  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04HBa0304E04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="68608" PGL_stop="69319"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68608" e_stop="69319"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="68608" e_stop="69319" e_length="712"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68608" stop="69319"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAATAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACTCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATAACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCATTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCAACAATGCGGGGAAGAGGACACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTTCTTTTAACTCTCTTAACTCCGCGG</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  G  S  Y  S  I  L  H  C  L  N  L  R  R  I  H  H  N  S  I  L  R  N  H  V  P  Q  E  G  H  R  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  F  M  F  L  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  I  R  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  T  M  R  G  R  G  H  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  C  S  F  N  S  L  N  S  A  </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  I  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  L  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  S  R  S  S  S  S  *  T  Q  Q  G  H  S  *  D  Q  R  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  Q  Q  C  G  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  Y  T  F  E  N  S  H  P  S  S  L  Q  T  K  P  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  I  T  L  E  V  V  L  L  T  L  L  T  P  R </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  *  S  S  L  F  L  T  H  *  W  V  L  L  N  S  S  L  S  Q  S  *  K  D  P  P  *  L  H  P  *  K  P  R  A  P  R  R  T  P  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  L  H  V  P  S  C  S  L  S  I  P  I  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  N  P  V  H  Q  A  H  E  R  S  R  G  I  R  K  T  K  G  H  H  Y  K  F  V  M  P  I  P  H  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  N  N  A  G  K  R  T  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  V  Q  *  L  L  K  L  F  F  *  L  S  *  L  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04HBa0304E04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="69810" PGL_stop="71317"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69810" e_stop="71317"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="69810" e_stop="71317" e_length="1508"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69810" stop="71246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70885" stop="71317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335932" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGGCCGCCCAAGGAAAGCATAACAATGGCCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACTATTACCTCGACCACCACGCCCTCCAGAAAAATGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTGTAACTTGGTCGGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGCAGTGAAGACTGAATTGGTCGGACTGAGTAATTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTTCGAAGCCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCATTGCCGCTATCTGTAAGGCCGAGATCCGCAATTCTGACCTCAACCCCTTCATAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCGATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCACTATTGGTTGACACTCGATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACGAAACCATTCTACTATACCCATCTTGTGTAGTAACTCGTGACAGTCAACCAGAAAATCATAGGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATTTTCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCGTTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGGGGAGTTACTGCCCTAGTATCAGATGGGCTAGGTGCTTGTCCTCTCCCTCTAGAGGACGTCCTCCCACGACCTCTTCCACGGCCCCTTGCCGCTGTTCTTC</gDNA_template>
            <first_frame> T  N  R  H  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  R  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  K  E  S  I  T  M  A  P  I  V  R  L  S  V  A  P  T  M  L  *  C  S  G  P  S  L  P  I  T  S  A  V  L  V  T  T  I  T  S  T  T  T  P  S  R  K  M  A  S  T  M  T  T  S  T  S  S  Y  W  G  S  V  T  W  S  G  T  I  S  P  N  M  S  N  L  P  T  S  I  T  F  F  G  V  D  H  M  P  L  G  E  V  L  T  G  L  R  W  S  P  N  Y  S  L  Q  *  R  L  N  W  S  D  *  V  I  S  R  T  L  S  S  S  V  R  T  I  K  L  T  S  L  S  K  P  F  *  C  R  C  C  G  E  V  V  W  L  H  S  F  H  F  Y  H  K  V  Y  H  L  L  E  G  F  C  H  C  R  Y  L  *  G  R  D  P  Q  F  *  P  Q  P  L  H  K  P  A  N  P  L  L  R  T  E  T  E  L  S  G  I  S  G  *  C  T  K  L  S  L  I  S  I  N  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  T  R  E  *  G  P  S  H  R  W  C  H  Y  W  L  T  L  D  M  *  P  P  P  H  F  G  V  P  L  K  L  I  S  H  K  L  H  T  K  P  F  Y  Y  T  H  L  V  *  *  L  V  T  V  N  Q  K  I  I  G  I  L  R  F  S  T  L  E  D  R  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  C  A  Y  F  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  F  *  N  R  R  C  W  R  R  K  H  W  R  C  L  T  L  I  R  *  P  A  K  I  S  Q  N  L  I  D  H  L  W  G  R  L  G  W  R  F  L  I  L  H  L  F  S  F  P  I  L  P  F  S  Y  Y  F  L  S  R  W  G  S  Y  C  P  S  I  R  W  A  R  C  L  S  S  P  S  R  G  R  P  P  T  T  S  S  T  A  P  C  R  C  S   </first_frame>
            <second_frame>  R  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  G  R  P  R  K  A  *  Q  W  P  L  S  F  V  C  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  L  P  L  P  F  W  *  P  L  L  P  R  P  P  R  P  P  E  K  W  P  L  P  *  P  P  L  P  L  A  I  G  G  L  *  L  G  R  G  Q  F  L  L  I  C  P  I  S  P  H  P  *  H  S  L  E  S  I  I  C  P  S  E  K  C  *  P  V  *  G  G  P  P  T  T  V  C  S  E  D  *  I  G  R  T  E  *  F  P  E  P  C  P  L  V  *  E  P  L  N  S  P  P  F  R  S  L  F  D  V  D  V  V  V  K  S  S  G  F  T  P  S  T  S  I  T  K  S  T  T  S  W  K  D  F  A  I  A  A  I  C  K  A  E  I  R  N  S  D  L  N  P  F  I  N  R  R  I  R  S  *  G  L  K  Q  S  *  V  A  Y  L  D  S  A  R  N  L  A  S  *  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  R  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  T  I  G  *  H  S  I  C  D  R  H  H  I  L  A  F  P  *  N  *  *  V  T  N  S  T  R  N  H  S  T  I  P  I  L  C  S  N  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  R  R  G  N  V  P  I  F  N  G  T  S  M  R  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  A  E  N  T  G  G  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  V  S  S  F  C  T  C  S  V  S  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  L  V  S  D  G  L  G  A  C  P  L  P  L  E  D  V  L  P  R  P  L  P  R  P  L  A  A  V  L  </second_frame>
            <third_frame>   E  *  A  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  T  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  A  A  Q  G  K  H  N  N  G  P  Y  R  S  S  V  R  C  P  Y  H  V  V  M  *  W  P  Q  F  A  H  Y  L  C  R  F  G  D  H  Y  Y  L  D  H  H  A  L  Q  K  N  G  L  Y  H  D  H  L  Y  L  *  L  L  G  V  C  N  L  V  G  D  N  F  S  *  Y  V  Q  S  P  H  I  H  N  I  L  W  S  R  S  Y  A  P  R  R  S  V  D  R  S  E  V  V  P  Q  L  Q  S  A  V  K  T  E  L  V  G  L  S  N  F  P  N  P  V  L  *  C  K  N  H  *  T  H  L  P  F  E  A  F  L  M  S  M  L  W  *  S  R  L  A  S  L  L  P  L  L  S  Q  S  L  P  P  L  G  R  I  L  P  L  P  L  S  V  R  P  R  S  A  I  L  T  S  T  P  S  *  T  G  E  S  A  L  E  D  *  N  R  V  E  W  H  I  W  I  V  H  E  T  *  P  H  K  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  D  P  S  K  S  G  G  Y  T  S  P  *  T  N  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  R  Y  V  T  A  T  T  F  W  R  S  L  E  T  D  K  S  Q  T  P  H  E  T  I  L  L  Y  P  S  C  V  V  T  R  D  S  Q  P  E  N  H  R  H  P  P  I  Q  H  P  *  R  P  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  D  V  E  M  C  L  F  S  M  E  H  P  C  G  E  P  *  *  P  H  V  V  L  L  K  P  E  V  L  A  Q  K  T  L  E  V  P  D  L  D  Q  I  T  R  *  D  K  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  F  A  L  V  Q  F  P  H  P  P  L  L  L  L  L  P  Q  S  V  G  E  L  L  P  *  Y  Q  M  G  *  V  L  V  L  S  L  *  R  T  S  S  H  D  L  F  H  G  P  L  P  L  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70038" stop="70295"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGPSLPITSAVLVTTITSTTTPSRKMASTMTTSTSSYWGSVTWSGTISPNMSNLPTSITFFGVDHMPLGEVLTGLRWSPNYSLQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71094" stop="71315"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PAKISQNLIDHLWGRLGWRFLILHLFSFPILPFSYYFLSRWGSYCPSIRWARCLSSPSRGRPPTTSSTAPCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70839" stop="71039"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVTVNQKIIGILRFSTLEDRRFQFQELTEKFMLIICHYRPSSQTWKCAYFQWNIHAGSHSSRMLYF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71119" stop="71316"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIISGVGWGGVSSFCTCSVSPSSPSLITSSVGGGVTALVSDGLGACPLPLEDVLPRPLPRPLAAVL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70348" stop="70542"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPPFRSLFDVDVVVKSSGFTPSTSITKSTTSWKDFAIAAICKAEIRNSDLNPFINRRIRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="71610" PGL_stop="71324"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71610" e_stop="71324"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="71610" e_stop="71324" e_length="287"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71610" stop="71324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGTTCGTTGGTCTTATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAAATTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATTTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACATCGGCCAGATAAGAAACAACTGAGCCAACCACTGGGGCTGTGG</gDNA_template>
            <first_frame> L  G  S  L  V  L  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  L  E  R  L  *  D  F  R  K  N  F  T  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  R  I  G  I  *  P  S  S  L  S  F  A  D  G  *  N  *  S  N  D  Y  A  N  T  N  I  G  Q  I  R  N  N  *  A  N  H  W  G  C   </first_frame>
            <second_frame>  *  V  R  W  S  Y  H  T  R  T  G  L  V  E  S  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  I  S  L  F  H  S  F  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  F  D  H  L  H  S  L  S  Q  M  V  R  T  R  A  T  T  T  P  T  P  T  S  A  R  *  E  T  T  E  P  T  T  G  A  V  </second_frame>
            <third_frame>   R  F  V  G  L  I  T  Q  E  Q  V  *  *  S  L  K  E  R  *  G  D  A  F  T  F  P  *  E  A  I  R  L  *  E  K  F  H  S  F  I  L  S  F  V  L  L  L  E  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  P  D  K  K  Q  L  S  Q  P  L  G  L  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04HBa0304E04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="74798" PGL_stop="75314"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74798" e_stop="75314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.907"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.907">
            <gDNA_exon_boundary e_start="74798" e_stop="75314" e_length="517"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74798" stop="75314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346498" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCTACTTGTTTTCCACCATCTCACTTCAACTAGAAAACACCTAAATTTTCAAGAATTATATGTGAGAAGAAACCAAACTTTTCTTTTTCTCTAAATCATCAACTCCACAATTCAAGATTCAATCTTTTCACTACTACTTATATTTTAAATTCAACTAGTGAACCACAACAACTACTTCCAAATGATGAACAAGAAATTAGTACTAAAAATGAAAAAATCAAGAAAATGAGAAATTAGATTGGTATGAACAATGGTATCCAATAATGCCACTAAATGAGCTTGATAAGAGAAGGCCACATGGGAAAAAAGTGATGGGAATTGATTTGGTAGTGTGGTGGGATAAAAATTTGGAGGAATGGAGAGTGGTGGATGATGCTTGTTCTCATAGATTGGCTCCACTTTCTCAAGGGAGAAGTGATCAATGGGGAAGATTGCAATGTGTGCATCATGGTTGGTGTTTTAGTGGTTATGGTGATTGCAAATTCATTCCTCAAGCTCCTCGAGACAAGCCTCCT</gDNA_template>
            <first_frame> F  L  L  V  F  H  H  L  T  S  T  R  K  H  L  N  F  Q  E  L  Y  V  R  R  N  Q  T  F  L  F  L  *  I  I  N  S  T  I  Q  D  S  I  F  S  L  L  L  I  F  *  I  Q  L  V  N  H  N  N  Y  F  Q  M  M  N  K  K  L  V  L  K  M  K  K  S  R  K  *  E  I  R  L  V  *  T  M  V  S  N  N  A  T  K  *  A  *  *  E  K  A  T  W  E  K  S  D  G  N  *  F  G  S  V  V  G  *  K  F  G  G  M  E  S  G  G  *  C  L  F  S  *  I  G  S  T  F  S  R  E  K  *  S  M  G  K  I  A  M  C  A  S  W  L  V  F  *  W  L  W  *  L  Q  I  H  S  S  S  S  S  R  Q  A  S  </first_frame>
            <second_frame>  F  Y  L  F  S  T  I  S  L  Q  L  E  N  T  *  I  F  K  N  Y  M  *  E  E  T  K  L  F  F  F  S  K  S  S  T  P  Q  F  K  I  Q  S  F  H  Y  Y  L  Y  F  K  F  N  *  *  T  T  T  T  T  S  K  *  *  T  R  N  *  Y  *  K  *  K  N  Q  E  N  E  K  L  D  W  Y  E  Q  W  Y  P  I  M  P  L  N  E  L  D  K  R  R  P  H  G  K  K  V  M  G  I  D  L  V  V  W  W  D  K  N  L  E  E  W  R  V  V  D  D  A  C  S  H  R  L  A  P  L  S  Q  G  R  S  D  Q  W  G  R  L  Q  C  V  H  H  G  W  C  F  S  G  Y  G  D  C  K  F  I  P  Q  A  P  R  D  K  P  P </second_frame>
            <third_frame>   S  T  C  F  P  P  S  H  F  N  *  K  T  P  K  F  S  R  I  I  C  E  K  K  P  N  F  S  F  S  L  N  H  Q  L  H  N  S  R  F  N  L  F  T  T  T  Y  I  L  N  S  T  S  E  P  Q  Q  L  L  P  N  D  E  Q  E  I  S  T  K  N  E  K  I  K  K  M  R  N  *  I  G  M  N  N  G  I  Q  *  C  H  *  M  S  L  I  R  E  G  H  M  G  K  K  *  W  E  L  I  W  *  C  G  G  I  K  I  W  R  N  G  E  W  W  M  M  L  V  L  I  D  W  L  H  F  L  K  G  E  V  I  N  G  E  D  C  N  V  C  I  M  V  G  V  L  V  V  M  V  I  A  N  S  F  L  K  L  L  E  T  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75012" stop="75314"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNQENEKLDWYEQWYPIMPLNELDKRRPHGKKVMGIDLVVWWDKNLEEWRVVDDACSHRLAPLSQGRSDQWGRLQCVHHGWCFSGYGDCKFIPQAPRDKPP</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74833" stop="75036"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTPKFSRIICEKKPNFSFSLNHQLHNSRFNLFTTTYILNSTSEPQQLLPNDEQEISTKNEKIKKMRN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="95125" PGL_stop="95301"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95125" e_stop="95301"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="95125" e_stop="95301" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95125" stop="95301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAAGGCTTCAAATGGGGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGACCACCAAACACTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  K  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  *  P  P  N  T  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  R  L  Q  M  G  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  D  H  Q  T  L  S  H  T  H  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  G  F  K  W  G  H  I  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  A  I  P  M  T  T  K  H  Y  H  T  R  T  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04HBa0304E04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="98622" PGL_stop="97178"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98622" e_stop="98450"/>
            <exon e_start="97705" e_stop="97178"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.084" e_score="0.902"/>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="98622" e_stop="98450" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.084">
            <gDNA_intron_boundary i_start="98449" i_stop="97706" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.915">
            <gDNA_exon_boundary e_start="97705" e_stop="97178" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98622" stop="98450"/>
              <exon start="97705" stop="97178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335938" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATATCGGTTAATGCTTATGAGGCTAAGTTTCGTGCGCTATCCAGATATGCCACTCAACTCTGTTTCAGTCCTCAAGAGCGGATTCGCCAGTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTCAGCCTTACAGATAGCGGCAACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGACGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCAGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACTGGATAGCGATATTGACTTCTGTATTGATCTTGAACCCCGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAGGAGAGTTAAAAGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCAGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</gDNA_template>
            <first_frame> A  R  *  D  I  G  *  C  L  *  G  *  V  S  C  A  I  Q  I  C  H  S  T  L  F  Q  S  S  R  A  D  S  P  V  C  E  G  V  E  V  R  I  A  D  F  S  L  T  D  S  G  N  G  K  I  L  P  R :   N  G  *  F  *  R  D  S  G  Y  D  L  A  F  S  A  I  C  N  L  G  L  *  C  *  N  G  D  V  S  Q  A  W  D  R  P  V  S  V  G  G  *  L  H  F  Q  S  G  P  H  R  L  L  S  S  C  *  E  N  D  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  S  S  S  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  G  *  R  Y  *  L  L  Y  *  S  *  T  P  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  R  R  V  K  S  T  T  S  R  V  I  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  S  F  V  C  K  E  E  G  W  E  F  S  N  V  Y  R  L   </first_frame>
            <second_frame>  Q  G  R  I  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  Q  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  I  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  V  S  F  L  R  A  K  K  M  I  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  L  D  S  D  I  D  F  C  I  D  L  E  P  R  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  G  E  L  K  A  Q  L  Q  E  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  Y  R  L  M  L  M  R  L  S  F  V  R  Y  P  D  M  P  L  N  S  V  S  V  L  K  S  G  F  A  S  L  *  R  G  *  G  Q  N  C  G  F  Q  P  Y  R  *  R  Q  R  Q  N  P  S  K  :  K  W  M  I  L  T  *  F  W  V  *  L  G  F  L  R  N  L  Q  S  W  I  V  M  L  K  R  *  R  *  P  S  L  G  Q  T  R  *  C  G  R  V  T  T  L  P  I  R  S  A  S  S  P  F  F  V  L  R  K  *  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  Q  *  F  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  W  I  A  I  L  T  S  V  L  I  L  N  P  V  L  A  P  F  L  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  H  N  F  K  S  Y  *  T  K  A  S  L  D  Q  V  H  L  L  G  V  L  Q  F  C  L  *  R  R  R  M  G  V  F  E  C  V  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0304E04.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98621" stop="98450"/>
                    <exon start="97705" stop="97179"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRISVNAYEAKFRALSRYATQLCFSPQERIRQFVKGLRSELRISALQIAATAKSFQEMDDFDVILGMTWLSPQFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVRIVSFLRAKKMISKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPLDSDIDFCIDLEPRTRPISIPPYRMAPAELGELKAQLQELLNKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="107305" PGL_stop="107088"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107305" e_stop="107088"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="107305" e_stop="107088" e_length="218"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107305" stop="107088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340801" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTCTCGCTCTGCTTCTTGCTCAATTCCTCAAGATAATCTGCCAGCCATATCATCTCTTTCCCAGCTTCAGCTATTGTCACATACTCAGCTTTAGTAGATGAAAGAGAAACACACTTCTAAAGCCTGGACATCCAACTGACTGCTGTTCCACCTATGCTGTAAATGTGCCCAGATGTACTCTTGCTCGAGTCAACATCCCCACCAAGATCAACATCC</gDNA_template>
            <first_frame> S  S  R  S  A  S  C  S  I  P  Q  D  N  L  P  A  I  S  S  L  S  Q  L  Q  L  L  S  H  T  Q  L  *  *  M  K  E  K  H  T  S  K  A  W  T  S  N  *  L  L  F  H  L  C  C  K  C  A  Q  M  Y  S  C  S  S  Q  H  P  H  Q  D  Q  H   </first_frame>
            <second_frame>  L  L  A  L  L  L  A  Q  F  L  K  I  I  C  Q  P  Y  H  L  F  P  S  F  S  Y  C  H  I  L  S  F  S  R  *  K  R  N  T  L  L  K  P  G  H  P  T  D  C  C  S  T  Y  A  V  N  V  P  R  C  T  L  A  R  V  N  I  P  T  K  I  N  I  </second_frame>
            <third_frame>   F  S  L  C  F  L  L  N  S  S  R  *  S  A  S  H  I  I  S  F  P  A  S  A  I  V  T  Y  S  A  L  V  D  E  R  E  T  H  F  *  S  L  D  I  Q  L  T  A  V  P  P  M  L  *  M  C  P  D  V  L  L  L  E  S  T  S  P  P  R  S  T  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04HBa0304E04.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 81 chains have been computed
$ 
$ memory statistics:
$ 161352 bytes spliced alignments in total
$ 17 spliced alignments have been stored
$ 9491 bytes was the average size of a spliced alignment
$ 19824 bytes predicted gene locations in total
$ 13 predicted gene locations have been stored
$ 1524 bytes was the average size of a predicted gene location
$ 5 megabytes was the average size of the backtrace matrix
$ 99 backtrace matrices have been allocated
$ 
$ date finished: 2009-02-20 08:48:39
-->
