<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-02-20 08:32:07"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C04HBa0208L16-pKNkq/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C04HBa0208L16-pKNkq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0208L16-pKNkq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M6674" ref_strand="+" ref_description="SGN-M6674 C2_At1g21480 [cosii_markers]">
      <seq>ttacacttaaacactcacctcactgctctgttctgctcagtagcaacaacaacaatggcaacgatacacagcagcaagaccagacctttcccttcacaccacacagtaaccccgtgcactcgcacccaccagatcggcgctctagctctcgtcatcatcactttcttcctcaccagaatcttcgaccagtcactcaattcctcttccttctcaatccctacttctggacaatacagatccaagaacgacgtcgtacgcttctccgattccggtgggtccatcttttggccacaacgcgggtatgggacccatctttcactgaagatttatgtgtatgatgagaatgaaattgatgggttaaaacacttgttgtatggccgtgatcggaagatttcgcctgattcttgcgttaaaggtcaatggggtactcaggttaagatacataggatgcttttacagtcaaggttccggactagaaagaaagaagaggcagaccttttctttgtgcctgcttatcctaagtgtgttcgagtgatgggtggactgaatgataaagagattaatcagacctatgtgaaggtcctaagtcaaatgccatatttcaggttatccggtggccgcaaccacatatttgtcttcccaagtggtgctggagctcatttatttaaatcgtgggcgacatacttgaatcggtctataatacttacccctgagggggatcgcacagataaaagagacactagtgccttcaatacatggaaagatattatcatacctggaaacattgatgatgggatgactactcatggctctaggatagttgagtctttgcctttgtcaaagaggaaacatctagcgaattatttaggtcgagcacaaggaaaggtgggtcgccttcggttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0208L16-pKNkq/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C04HBa0208L16.1" temp_strand="+" temp_description="C04HBa0208L16.1  CU928193.6 htgs_phase:3 submitted_to_sgn_as:C04HBa0208L16 sequenced_by:sanger upload_account_name:uk">
        <position start="53263" stop="58255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53563" g_stop="53994" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53995" i_stop="56742" i_length="2748">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56743" g_stop="56889" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="579" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56890" i_stop="57082" i_length="193">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57083" g_stop="57147" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="644" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57148" i_stop="57568" i_length="421">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57569" g_stop="57638" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="714" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57639" i_stop="58028" i_length="390">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58029" g_stop="58217" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="903" r_length="189" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0208L16.1" gen_strand="+" ref_id="SGN-M6674" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>903</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0208L16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M6674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53563" e_stop="53994"/>
          <exon e_start="56743" e_stop="56889"/>
          <exon e_start="57083" e_stop="57147"/>
          <exon e_start="57569" e_stop="57638"/>
          <exon e_start="58029" e_stop="58217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACACTTAAACACTCACCTCACTGCTCTGTTCTGCTCAGTAGCAACAACAACAATGGCAACCATACACAGCAGCAAGACCAGACCTTTCCCTTCACACCACACAGTAACCCCGTGCACTCGCACCCACCAGATCGGCGCTCTAGCTCTCGTCATCATCACTTTCTTCCTCACCAGAATCTTCGACCAGTCACTCAATTCCTCTTCCTTCTCAATCCCTACTTCTGGACAATACAGATCCAAGAACGACGTCATACGCTTCTCCGATTCCGGTGGGTCCATCTTTTGGCCACAACGCGGGTATGGGACCCATCTTTCACTGAAGATTTATGTGTATGATGAGAATGAAATTGATGGGTTAAAACACTTGTTGTATGGCCGTGATCGGAAGATTTCGCCTGATTCTTGCGTTAAAGGTCAATGGGGTACTCAGGTAATATTTTTTCCCAATTTTTCCAGTATTATGAGAAACTTGTTCAAGTTAAATTGACAGGAATTAGCGAATTGCTGTTAGTTTTTGTGAATATTGTTCTTCCTATCAGATTGGATTTGGGAAATGTTAGATTTTTTTTAGGATAATCAAGTATTTTAGTGTAATGTAGTAGAAGTTAATCATTATATGGTTGCGATTTTGGTTATCAAGAACTTGGTTGAATTTGTGTTGGTAGACCAGATCAATAGCAGCTCCACACATTGATTTTTTGCAACTTCTAGCATATGGAGCTCGCTAACATCCACATATTAGTGAGAAAATGGCGAATCATCAAGGAAGTTATCGTTTTGTTTTAATCATGTATTTGCTGTCTTGGATGAAGATGCTTTAGAGTAGTTATGATTTTGAGGGCATGATTTGAAATTAGTTGTTACAATGTAGATGTGGTTATTGTAAGCTAGTAGCAAAACTAGGTAGCGTGAAGTAACTTCTAGCATATGGACCTCGCTAACATCCACATATTATCAAGAGCCTGCATTTTGCCCGTTTATCGAAGTCTAATTTTTGTCAAACATTACTTTTTCCATGTCTAACAATGAGGATTAATATTATCTTTTTGAGGCTGGTAACATTAGTCTAGAGATATCCACAGGTATACAACAACCAAAAGTGTAGTTCCCCTTCAAAAAAAGTATACATCTTATAAAATAATCAGACCTATAAACAATCTAGTACATCAATTATGTCTTCTGTTCTAGCTAAAATATCTTGTTTACACCAAATATAGAAAAGAGCTAAGCAATTCATCCTAATCTTCCGAAGGCTATTCTGCACATTTTCAAAGCTCCTATTGTTCCTCTCTTTCCAAATTGTCCACCAAATACATGTTGGGACAATCTTCCATCTGACCTTCTCCTTTGAAGCATTGCCACCAAATGCATAAGGGTTAACATCTAAGAGTCAAAGTGGTGTGAAGTTGTTGTACAATTTGTAACTCTCTTCTTTTCGAATTATAAGTCGTTGTTGCAAAGAAAGGGAAATTGAAGAAGGAGAAACAGAAAAGGATCTTAAGGGAATATATCTGTTTTCTTCATTTGCTTAAGTGACATCTGAGGAACTATCAAGGAAAAGCACATTTGTCCTTCTACTTGTGAAGCGACTTGAAGTCCTTCCTTGTAGTTCTCTATCTTCATTTGAGAATTACTTGTAAATTTTCTTGACTATTTGAGATCATGTGCAACATTTCTACTCCAAATCTACTCCGGCTGTGGAGAAAAATCTGGAAAACCAAAGCTCCTTAAAAGGTTTATTGTTCTGTCTAGTTAGTTGCAAAGGAGGCCTGCCTAATCCAATACAATCTCCAAAAGAGAGGCTACCAAATGTGCAGAAGATAACCACTTTGTGAAGGTTAAGTGGAAGACAAGCGTCTCTTCTTGCACTGTCACTTCACACATCAAATGTGACCACTCTTCTTCAATACCTTTACATTAAAACCAATCGTCGACTTTCTGAAGATTTGGCACAGTAAAAAGACCTCAGCGAGGCAACATCAGTATTTGGCATTCCATCCCAGCTGCTATATGGTGGACTCATTAGAGGGAATCAGGGAAAGAAACCATACAGTTTTTGAAGGCAAATTTGAAAATGTCATTACCCTTAAGCATAGTTGTATACTTTTGCTTCACTTTTGGTGCAAGTTGGCATTGTAAATGATGCCGAAGCCATTCTGCGTTTCTTCAGAACTTTACATTATATGTGACTGCATCCTCTGCTTAGTCTCCAAATCATCACTTTCTTACTGATGGAATAATTTGTTCTTTACTTGTCAGAAAAAGTTTCCTATCTTTATTTTTTGGAACTGGTAACTTGGATGTATAAATAAACAAAACAGTACATGTGTTGTACTTTAACTATATTTTTTGAGATTCTAAGGAATTAGATGGTACCTAGAACATTAACTATATCAACAGAATCCTCAGAATAAGTCTGTTTACACAAACAAAAAAGCAGAAGGCAATTCTATTTGATCTTTTGCACTGAGTTAATCAAAACACCTGGAATTCCTTTCTTTCCAGACTGTCCACCAAATGCTTGCAGGGACATTTCTCCATCTACTCCTGTCTTCTGCCTGAACTCCCGCATTCTCTCAACTATGTAAAACTTCAGTGACCTTTTCGTGCATTATCCGTTTGATCTTCGGTTGAAAGTGATATCCCATCCATGCTCTGTCCTTATTTCTTCTATGGTCTTATGTTGAAGCACCACTAAGTTGAATATGTCTGGGAATCTCTCAAGAAGACTAGTTCTCTATCTTTATTTGGTAATCAATAAAGAGGTTTTAATATTTTCTTCCTTTTATTTATTTTCTTTATTTCATTTCCTTAACTTCAAAAGCTTTAGTGACAAAGATGACTCGTTGTGTCAATAAATTTCTCCGTCTATGCAGGGTATTGCTAGAATTTACTCTCCACTTTTTTCTTCAAACTATAAATCTGAGTATTTTTATTTTGGCTCTTTTTCTCGAGGGAAACATAAGTAAAGCCTGCAAGTATTACATTGTTGCCACCCAATAATAGCATGAAAAATTTTCAGTACTAGGCTTTGTAGACCCTTGTGGTCTGGCCCTTCCCTGGACCCCGCGCATAGAGGTAACTTACTGCACTGGGATTCCCTTATTAGGCTTCCTGTTATAGTTTTGAATTTAACTATCTAATGCTTCTATATCTTGTTCTTTTGATGTGCCTGTAGGTTAAGATACATAGGATGCTTTTGCAGTCAAGGTTCCGGACTAGAAAGAAAGAAGAGGCAGACCTTTTCTTTGTGCCTGCTTATCCTAAGTGTGTTCGAGTGATGGGTGGACTGAATGACAAAGAGATTAATCAGACCTATGTGAAGGTAGTAAAATTCAGGACCTGAAAATTACATTGGTGCTGTCAAAAAACTTTCTAAGTTCTATTTATTGCTATAGTTGAATAATTGAGATATTTTGCTTGGCTTTAGAGCTTCAATTGAATTGTCACTGTATCCATTTTCTCTCATGTACCTTTATGTATGATCTCCTCTCTCTCTCTCAACCTTTTGCTTGCAGGTCCTAAGTCAAATGCCATATTTCAGGTTATCCGGTGGCCGCAACCACATATTTGTCTTCCCAAGGTATAAGTTGTCATATGGAGATATTTTGAACTCATGAATTGGAAAGTTGACCCAATGATGTATGGAGTTTGTAAGAGCTGGTAAATGAATATGACAGGCATTGCTAAGTTCTGCATGGGCTTAGATGTAGATATAAAGCCACAACCTCAGAGTTGCAATCTGATAAAAATATCGCCTAATGGTAGTTGTGCTGCATTTGTCAAAACTGCCATTTGAAAAAGGCAGGAATATTTACCTTATGAACTGGGATGTAGATGTGAAGCACAACTTAAATGTTGCAGTCAGATAAAATATTGATCATCCATTGTTACCTGTGCTAAATGCTGTTGCAAATAGACGTGCAACTAAATTTCTCTAAGTAGCATTTTCAATTGAAAGAATAATACTTTTTCTTATGTGTGCTACTTTTGCTGAACTACAGTGGTGCTGGAGCTCATTTATTTAAATCGTGGGCGACATACTTGAATCGGTCTATAATACTTACCCCTGAGGTAAGGTCTTACAAACTGTTAGTCTATAATCCTTACCCATCATATGTAGTCGTAGAAAATGTCTCATGGGTTGCTGTGCTGTCATTCACTATGCACTGATCTAACTTTTTCTGTGAATCTGTCTCTCATGGAATGTCAACTCACTCTCACTGTCTGTATGTTGTTTCCATGGTCTGTTCGTTGTGACAATTTAATATATCATGCACAGAACCTGCCTAAGAAAATAAATTATAATATTTCTGTCCAGTGACATGAGATTATTAGCAGGTTCATCAAGTTATTCTCTATGTTTGTTGTCTTAACACGCTTGCATCTATCATGCCTGTTATCTTCAATAAGTTAATCTCATTCAGCCTTCCATGTTGAGGAATATCATTACATCTAATTCAGGGGGATCGCACAGATAAAAGAGACACTAGTGCCTTCAATACATGGAAAGATATTATCATACCTGGAAACATTGATGATGGGATGACTACTCATGGCTCTAGGATAGTTGAGTCTTTGCCTTTGTCAAAGAGGAAACATCTAGCGAATTATTTAGGTCGAGCACAAGGAAAGGTGGGTCGCCTTCGGTTG</genome_strand>
        <mrna_strand>TTACACTTAAACACTCACCTCACTGCTCTGTTCTGCTCAGTAGCAACAACAACAATGGCAACGATACACAGCAGCAAGACCAGACCTTTCCCTTCACACCACACAGTAACCCCGTGCACTCGCACCCACCAGATCGGCGCTCTAGCTCTCGTCATCATCACTTTCTTCCTCACCAGAATCTTCGACCAGTCACTCAATTCCTCTTCCTTCTCAATCCCTACTTCTGGACAATACAGATCCAAGAACGACGTCGTACGCTTCTCCGATTCCGGTGGGTCCATCTTTTGGCCACAACGCGGGTATGGGACCCATCTTTCACTGAAGATTTATGTGTATGATGAGAATGAAATTGATGGGTTAAAACACTTGTTGTATGGCCGTGATCGGAAGATTTCGCCTGATTCTTGCGTTAAAGGTCAATGGGGTACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGATACATAGGATGCTTTTACAGTCAAGGTTCCGGACTAGAAAGAAAGAAGAGGCAGACCTTTTCTTTGTGCCTGCTTATCCTAAGTGTGTTCGAGTGATGGGTGGACTGAATGATAAAGAGATTAATCAGACCTATGTGAAG.................................................................................................................................................................................................GTCCTAAGTCAAATGCCATATTTCAGGTTATCCGGTGGCCGCAACCACATATTTGTCTTCCCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCTGGAGCTCATTTATTTAAATCGTGGGCGACATACTTGAATCGGTCTATAATACTTACCCCTGAG......................................................................................................................................................................................................................................................................................................................................................................................................GGGGATCGCACAGATAAAAGAGACACTAGTGCCTTCAATACATGGAAAGATATTATCATACCTGGAAACATTGATGATGGGATGACTACTCATGGCTCTAGGATAGTTGAGTCTTTGCCTTTGTCAAAGAGGAAACATCTAGCGAATTATTTAGGTCGAGCACAAGGAAAGGTGGGTCGCCTTCGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0208L16-pKNkq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M6674-2" ref_strand="+" ref_description="SGN-M6674-2 C2_At1g21480-2 [cosii_markers]">
      <seq>ctgctctgttctgctcagtagcagcaacaatggcaagcatacacagcagcaagaccagacctttcgcttctcaccacaccgtaaccccatgcactcgcacccaccagatcggcgctctagctctcgtcatcatcactttcttcctcaccagaatcttcgaccagtcactcaattcctcttccttttcaacccctacttctggacaatacagatccaagaacgacgtcgtacggttctccgattccggtgggtccatcttttggccacaacgtgggtatgggacccatctttccctgaagatttatgtgtatgatgagaatgaaattgatgggttaaaacacttgttgtatggccgtgatgggaagatttcgcctgattcttgcgttaaaggacaatggggtactcaggttaagatacataggatgcttttgcagtcaaggttccggaccagaaagaaagaagaggcggaccttttctttgtgcctgcttatcctaagtgtgttcgagtgatgggcggactgaatgacaaagagattaatcagacctatgtgaaggtcctaagtcaaatgccatatttcaggttattcggtggccgcaaccacatatttgtcttcccaagtggtgctggagctcatttatttaaatagtgggcgacatacttgaatcgggctataatacttaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0208L16-pKNkq/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C04HBa0208L16.1" temp_strand="+" temp_description="C04HBa0208L16.1  CU928193.6 htgs_phase:3 submitted_to_sgn_as:C04HBa0208L16 sequenced_by:sanger upload_account_name:uk">
        <position start="53290" stop="57933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53585" g_stop="53994" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="407" r_length="407" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53995" i_stop="56742" i_length="2748">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56743" g_stop="56889" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="554" r_length="147" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56890" i_stop="57082" i_length="193">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57083" g_stop="57147" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="619" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57148" i_stop="57568" i_length="421">
            <donor d_prob="0.827" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57569" g_stop="57633" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="684" r_length="65" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0208L16.1" gen_strand="+" ref_id="SGN-M6674-2" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0208L16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M6674-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53585" e_stop="53994"/>
          <exon e_start="56743" e_stop="56889"/>
          <exon e_start="57083" e_stop="57147"/>
          <exon e_start="57569" e_stop="57633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTCTGTTCTGCTCAGTAGCAACAACAACAATGGCAACCATACACAGCAGCAAGACCAGACCTTTCCCTTCACACCACACAGTAACCCCGTGCACTCGCACCCACCAGATCGGCGCTCTAGCTCTCGTCATCATCACTTTCTTCCTCACCAGAATCTTCGACCAGTCACTCAATTCCTCTTCCTTCTCAATCCCTACTTCTGGACAATACAGATCCAAGAACGACGTCATACGCTTCTCCGATTCCGGTGGGTCCATCTTTTGGCCACAACGCGGGTATGGGACCCATCTTTCACTGAAGATTTATGTGTATGATGAGAATGAAATTGATGGGTTAAAACACTTGTTGTATGGCCGTGATCGGAAGATTTCGCCTGATTCTTGCGTTAAAGGTCAATGGGGTACTCAGGTAATATTTTTTCCCAATTTTTCCAGTATTATGAGAAACTTGTTCAAGTTAAATTGACAGGAATTAGCGAATTGCTGTTAGTTTTTGTGAATATTGTTCTTCCTATCAGATTGGATTTGGGAAATGTTAGATTTTTTTTAGGATAATCAAGTATTTTAGTGTAATGTAGTAGAAGTTAATCATTATATGGTTGCGATTTTGGTTATCAAGAACTTGGTTGAATTTGTGTTGGTAGACCAGATCAATAGCAGCTCCACACATTGATTTTTTGCAACTTCTAGCATATGGAGCTCGCTAACATCCACATATTAGTGAGAAAATGGCGAATCATCAAGGAAGTTATCGTTTTGTTTTAATCATGTATTTGCTGTCTTGGATGAAGATGCTTTAGAGTAGTTATGATTTTGAGGGCATGATTTGAAATTAGTTGTTACAATGTAGATGTGGTTATTGTAAGCTAGTAGCAAAACTAGGTAGCGTGAAGTAACTTCTAGCATATGGACCTCGCTAACATCCACATATTATCAAGAGCCTGCATTTTGCCCGTTTATCGAAGTCTAATTTTTGTCAAACATTACTTTTTCCATGTCTAACAATGAGGATTAATATTATCTTTTTGAGGCTGGTAACATTAGTCTAGAGATATCCACAGGTATACAACAACCAAAAGTGTAGTTCCCCTTCAAAAAAAGTATACATCTTATAAAATAATCAGACCTATAAACAATCTAGTACATCAATTATGTCTTCTGTTCTAGCTAAAATATCTTGTTTACACCAAATATAGAAAAGAGCTAAGCAATTCATCCTAATCTTCCGAAGGCTATTCTGCACATTTTCAAAGCTCCTATTGTTCCTCTCTTTCCAAATTGTCCACCAAATACATGTTGGGACAATCTTCCATCTGACCTTCTCCTTTGAAGCATTGCCACCAAATGCATAAGGGTTAACATCTAAGAGTCAAAGTGGTGTGAAGTTGTTGTACAATTTGTAACTCTCTTCTTTTCGAATTATAAGTCGTTGTTGCAAAGAAAGGGAAATTGAAGAAGGAGAAACAGAAAAGGATCTTAAGGGAATATATCTGTTTTCTTCATTTGCTTAAGTGACATCTGAGGAACTATCAAGGAAAAGCACATTTGTCCTTCTACTTGTGAAGCGACTTGAAGTCCTTCCTTGTAGTTCTCTATCTTCATTTGAGAATTACTTGTAAATTTTCTTGACTATTTGAGATCATGTGCAACATTTCTACTCCAAATCTACTCCGGCTGTGGAGAAAAATCTGGAAAACCAAAGCTCCTTAAAAGGTTTATTGTTCTGTCTAGTTAGTTGCAAAGGAGGCCTGCCTAATCCAATACAATCTCCAAAAGAGAGGCTACCAAATGTGCAGAAGATAACCACTTTGTGAAGGTTAAGTGGAAGACAAGCGTCTCTTCTTGCACTGTCACTTCACACATCAAATGTGACCACTCTTCTTCAATACCTTTACATTAAAACCAATCGTCGACTTTCTGAAGATTTGGCACAGTAAAAAGACCTCAGCGAGGCAACATCAGTATTTGGCATTCCATCCCAGCTGCTATATGGTGGACTCATTAGAGGGAATCAGGGAAAGAAACCATACAGTTTTTGAAGGCAAATTTGAAAATGTCATTACCCTTAAGCATAGTTGTATACTTTTGCTTCACTTTTGGTGCAAGTTGGCATTGTAAATGATGCCGAAGCCATTCTGCGTTTCTTCAGAACTTTACATTATATGTGACTGCATCCTCTGCTTAGTCTCCAAATCATCACTTTCTTACTGATGGAATAATTTGTTCTTTACTTGTCAGAAAAAGTTTCCTATCTTTATTTTTTGGAACTGGTAACTTGGATGTATAAATAAACAAAACAGTACATGTGTTGTACTTTAACTATATTTTTTGAGATTCTAAGGAATTAGATGGTACCTAGAACATTAACTATATCAACAGAATCCTCAGAATAAGTCTGTTTACACAAACAAAAAAGCAGAAGGCAATTCTATTTGATCTTTTGCACTGAGTTAATCAAAACACCTGGAATTCCTTTCTTTCCAGACTGTCCACCAAATGCTTGCAGGGACATTTCTCCATCTACTCCTGTCTTCTGCCTGAACTCCCGCATTCTCTCAACTATGTAAAACTTCAGTGACCTTTTCGTGCATTATCCGTTTGATCTTCGGTTGAAAGTGATATCCCATCCATGCTCTGTCCTTATTTCTTCTATGGTCTTATGTTGAAGCACCACTAAGTTGAATATGTCTGGGAATCTCTCAAGAAGACTAGTTCTCTATCTTTATTTGGTAATCAATAAAGAGGTTTTAATATTTTCTTCCTTTTATTTATTTTCTTTATTTCATTTCCTTAACTTCAAAAGCTTTAGTGACAAAGATGACTCGTTGTGTCAATAAATTTCTCCGTCTATGCAGGGTATTGCTAGAATTTACTCTCCACTTTTTTCTTCAAACTATAAATCTGAGTATTTTTATTTTGGCTCTTTTTCTCGAGGGAAACATAAGTAAAGCCTGCAAGTATTACATTGTTGCCACCCAATAATAGCATGAAAAATTTTCAGTACTAGGCTTTGTAGACCCTTGTGGTCTGGCCCTTCCCTGGACCCCGCGCATAGAGGTAACTTACTGCACTGGGATTCCCTTATTAGGCTTCCTGTTATAGTTTTGAATTTAACTATCTAATGCTTCTATATCTTGTTCTTTTGATGTGCCTGTAGGTTAAGATACATAGGATGCTTTTGCAGTCAAGGTTCCGGACTAGAAAGAAAGAAGAGGCAGACCTTTTCTTTGTGCCTGCTTATCCTAAGTGTGTTCGAGTGATGGGTGGACTGAATGACAAAGAGATTAATCAGACCTATGTGAAGGTAGTAAAATTCAGGACCTGAAAATTACATTGGTGCTGTCAAAAAACTTTCTAAGTTCTATTTATTGCTATAGTTGAATAATTGAGATATTTTGCTTGGCTTTAGAGCTTCAATTGAATTGTCACTGTATCCATTTTCTCTCATGTACCTTTATGTATGATCTCCTCTCTCTCTCTCAACCTTTTGCTTGCAGGTCCTAAGTCAAATGCCATATTTCAGGTTATCCGGTGGCCGCAACCACATATTTGTCTTCCCAAGGTATAAGTTGTCATATGGAGATATTTTGAACTCATGAATTGGAAAGTTGACCCAATGATGTATGGAGTTTGTAAGAGCTGGTAAATGAATATGACAGGCATTGCTAAGTTCTGCATGGGCTTAGATGTAGATATAAAGCCACAACCTCAGAGTTGCAATCTGATAAAAATATCGCCTAATGGTAGTTGTGCTGCATTTGTCAAAACTGCCATTTGAAAAAGGCAGGAATATTTACCTTATGAACTGGGATGTAGATGTGAAGCACAACTTAAATGTTGCAGTCAGATAAAATATTGATCATCCATTGTTACCTGTGCTAAATGCTGTTGCAAATAGACGTGCAACTAAATTTCTCTAAGTAGCATTTTCAATTGAAAGAATAATACTTTTTCTTATGTGTGCTACTTTTGCTGAACTACAGTGGTGCTGGAGCTCATTTATTTAAATCGTGGGCGACATACTTGAATCGGTCTATAATACTTACCC</genome_strand>
        <mrna_strand>CTGCTCTGTTCTGCTCAGTAG---CAGCAACAATGGCAAGCATACACAGCAGCAAGACCAGACCTTTCGCTTCTCACCACACCGTAACCCCATGCACTCGCACCCACCAGATCGGCGCTCTAGCTCTCGTCATCATCACTTTCTTCCTCACCAGAATCTTCGACCAGTCACTCAATTCCTCTTCCTTTTCAACCCCTACTTCTGGACAATACAGATCCAAGAACGACGTCGTACGGTTCTCCGATTCCGGTGGGTCCATCTTTTGGCCACAACGTGGGTATGGGACCCATCTTTCCCTGAAGATTTATGTGTATGATGAGAATGAAATTGATGGGTTAAAACACTTGTTGTATGGCCGTGATGGGAAGATTTCGCCTGATTCTTGCGTTAAAGGACAATGGGGTACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGATACATAGGATGCTTTTGCAGTCAAGGTTCCGGACCAGAAAGAAAGAAGAGGCGGACCTTTTCTTTGTGCCTGCTTATCCTAAGTGTGTTCGAGTGATGGGCGGACTGAATGACAAAGAGATTAATCAGACCTATGTGAAG.................................................................................................................................................................................................GTCCTAAGTCAAATGCCATATTTCAGGTTATTCGGTGGCCGCAACCACATATTTGTCTTCCCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCTGGAGCTCATTTATTTAAATAGTGGGCGACATACTTGAATCGGGCTATAATACTTACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>2</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="53563" PGL_stop="58217"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53563" e_stop="53994"/>
            <exon e_start="56743" e_stop="56889"/>
            <exon e_start="57083" e_stop="57147"/>
            <exon e_start="57569" e_stop="57638"/>
            <exon e_start="58029" e_stop="58217"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.995"/>
          <exon-intron don_prob="0.987" acc_prob="0.997" e_score="0.986"/>
          <exon-intron don_prob="0.827" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="53563" e_stop="53994" e_length="432"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="53995" i_stop="56742" i_length="2748"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="56743" e_stop="56889" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.997">
            <gDNA_intron_boundary i_start="56890" i_stop="57082" i_length="193"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57083" e_stop="57147" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.827" acc_prob="0.981">
            <gDNA_intron_boundary i_start="57148" i_stop="57568" i_length="421"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57569" e_stop="57638" e_length="70"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.982">
            <gDNA_intron_boundary i_start="57639" i_stop="58028" i_length="390"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58029" e_stop="58217" e_length="189"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53563" stop="53994"/>
              <exon start="56743" stop="56889"/>
              <exon start="57083" stop="57147"/>
              <exon start="57569" stop="57638"/>
              <exon start="58029" stop="58217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M6674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53585" stop="53994"/>
              <exon start="56743" stop="56889"/>
              <exon start="57083" stop="57147"/>
              <exon start="57569" stop="57633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M6674-2" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACACTTAAACACTCACCTCACTGCTCTGTTCTGCTCAGTAGCAACAACAACAATGGCAACCATACACAGCAGCAAGACCAGACCTTTCCCTTCACACCACACAGTAACCCCGTGCACTCGCACCCACCAGATCGGCGCTCTAGCTCTCGTCATCATCACTTTCTTCCTCACCAGAATCTTCGACCAGTCACTCAATTCCTCTTCCTTCTCAATCCCTACTTCTGGACAATACAGATCCAAGAACGACGTCATACGCTTCTCCGATTCCGGTGGGTCCATCTTTTGGCCACAACGCGGGTATGGGACCCATCTTTCACTGAAGATTTATGTGTATGATGAGAATGAAATTGATGGGTTAAAACACTTGTTGTATGGCCGTGATCGGAAGATTTCGCCTGATTCTTGCGTTAAAGGTCAATGGGGTACTCAG : GTTAAGATACATAGGATGCTTTTGCAGTCAAGGTTCCGGACTAGAAAGAAAGAAGAGGCAGACCTTTTCTTTGTGCCTGCTTATCCTAAGTGTGTTCGAGTGATGGGTGGACTGAATGACAAAGAGATTAATCAGACCTATGTGAAG : GTCCTAAGTCAAATGCCATATTTCAGGTTATCCGGTGGCCGCAACCACATATTTGTCTTCCCAAG : TGGTGCTGGAGCTCATTTATTTAAATCGTGGGCGACATACTTGAATCGGTCTATAATACTTACCCCTGAG : GGGGATCGCACAGATAAAAGAGACACTAGTGCCTTCAATACATGGAAAGATATTATCATACCTGGAAACATTGATGATGGGATGACTACTCATGGCTCTAGGATAGTTGAGTCTTTGCCTTTGTCAAAGAGGAAACATCTAGCGAATTATTTAGGTCGAGCACAAGGAAAGGTGGGTCGCCTTCGGTTG</gDNA_template>
            <first_frame> L  H  L  N  T  H  L  T  A  L  F  C  S  V  A  T  T  T  M  A  T  I  H  S  S  K  T  R  P  F  P  S  H  H  T  V  T  P  C  T  R  T  H  Q  I  G  A  L  A  L  V  I  I  T  F  F  L  T  R  I  F  D  Q  S  L  N  S  S  S  F  S  I  P  T  S  G  Q  Y  R  S  K  N  D  V  I  R  F  S  D  S  G  G  S  I  F  W  P  Q  R  G  Y  G  T  H  L  S  L  K  I  Y  V  Y  D  E  N  E  I  D  G  L  K  H  L  L  Y  G  R  D  R  K  I  S  P  D  S  C  V  K  G  Q  W  G  T  Q  :  V  K  I  H  R  M  L  L  Q  S  R  F  R  T  R  K  K  E  E  A  D  L  F  F  V  P  A  Y  P  K  C  V  R  V  M  G  G  L  N  D  K  E  I  N  Q  T  Y  V  K  :  V  L  S  Q  M  P  Y  F  R  L  S  G  G  R  N  H  I  F  V  F  P  S :   G  A  G  A  H  L  F  K  S  W  A  T  Y  L  N  R  S  I  I  L  T  P  E  :  G  D  R  T  D  K  R  D  T  S  A  F  N  T  W  K  D  I  I  I  P  G  N  I  D  D  G  M  T  T  H  G  S  R  I  V  E  S  L  P  L  S  K  R  K  H  L  A  N  Y  L  G  R  A  Q  G  K  V  G  R  L  R  L </first_frame>
            <second_frame>  Y  T  *  T  L  T  S  L  L  C  S  A  Q  *  Q  Q  Q  Q  W  Q  P  Y  T  A  A  R  P  D  L  S  L  H  T  T  Q  *  P  R  A  L  A  P  T  R  S  A  L  *  L  S  S  S  S  L  S  S  S  P  E  S  S  T  S  H  S  I  P  L  P  S  Q  S  L  L  L  D  N  T  D  P  R  T  T  S  Y  A  S  P  I  P  V  G  P  S  F  G  H  N  A  G  M  G  P  I  F  H  *  R  F  M  C  M  M  R  M  K  L  M  G  *  N  T  C  C  M  A  V  I  G  R  F  R  L  I  L  A  L  K  V  N  G  V  L  R :   L  R  Y  I  G  C  F  C  S  Q  G  S  G  L  E  R  K  K  R  Q  T  F  S  L  C  L  L  I  L  S  V  F  E  *  W  V  D  *  M  T  K  R  L  I  R  P  M  *  R :   S  *  V  K  C  H  I  S  G  Y  P  V  A  A  T  T  Y  L  S  S  Q   : V  V  L  E  L  I  Y  L  N  R  G  R  H  T  *  I  G  L  *  Y  L  P  L  R :   G  I  A  Q  I  K  E  T  L  V  P  S  I  H  G  K  I  L  S  Y  L  E  T  L  M  M  G  *  L  L  M  A  L  G  *  L  S  L  C  L  C  Q  R  G  N  I  *  R  I  I  *  V  E  H  K  E  R  W  V  A  F  G   </second_frame>
            <third_frame>   T  L  K  H  S  P  H  C  S  V  L  L  S  S  N  N  N  N  G  N  H  T  Q  Q  Q  D  Q  T  F  P  F  T  P  H  S  N  P  V  H  S  H  P  P  D  R  R  S  S  S  R  H  H  H  F  L  P  H  Q  N  L  R  P  V  T  Q  F  L  F  L  L  N  P  Y  F  W  T  I  Q  I  Q  E  R  R  H  T  L  L  R  F  R  W  V  H  L  L  A  T  T  R  V  W  D  P  S  F  T  E  D  L  C  V  *  *  E  *  N  *  W  V  K  T  L  V  V  W  P  *  S  E  D  F  A  *  F  L  R  *  R  S  M  G  Y  S   : G  *  D  T  *  D  A  F  A  V  K  V  P  D  *  K  E  R  R  G  R  P  F  L  C  A  C  L  S  *  V  C  S  S  D  G  W  T  E  *  Q  R  D  *  S  D  L  C  E   : G  P  K  S  N  A  I  F  Q  V  I  R  W  P  Q  P  H  I  C  L  P  K  :  W  C  W  S  S  F  I  *  I  V  G  D  I  L  E  S  V  Y  N  T  Y  P  *   : G  G  S  H  R  *  K  R  H  *  C  L  Q  Y  M  E  R  Y  Y  H  T  W  K  H  *  *  W  D  D  Y  S  W  L  *  D  S  *  V  F  A  F  V  K  E  E  T  S  S  E  L  F  R  S  S  T  R  K  G  G  S  P  S  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0208L16.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53563" stop="53994"/>
                    <exon start="56743" stop="56889"/>
                    <exon start="57083" stop="57147"/>
                    <exon start="57569" stop="57638"/>
                    <exon start="58029" stop="58217"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>903</number_coding_nucleotides>
                  <number_encoded_amino_acids>301</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHLNTHLTALFCSVATTTMATIHSSKTRPFPSHHTVTPCTRTHQIGALALVIITFFLTRIFDQSLNSSSFSIPTSGQYRSKNDVIRFSDSGGSIFWPQRGYGTHLSLKIYVYDENEIDGLKHLLYGRDRKISPDSCVKGQWGTQVKIHRMLLQSRFRTRKKEEADLFFVPAYPKCVRVMGGLNDKEINQTYVKVLSQMPYFRLSGGRNHIFVFPSGAGAHLFKSWATYLNRSIILTPEGDRTDKRDTSAFNTWKDIIIPGNIDDGMTTHGSRIVESLPLSKRKHLANYLGRAQGKVGRLRL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 6 chains have been computed
$ 
$ memory statistics:
$ 4304 bytes spliced alignments in total
$ 2 spliced alignments have been stored
$ 2152 bytes was the average size of a spliced alignment
$ 5656 bytes predicted gene locations in total
$ 1 predicted gene locations have been stored
$ 5656 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 6 backtrace matrices have been allocated
$ 
$ date finished: 2009-02-20 08:32:10
-->
