<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-04 11:39:55"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341194" ref_strand="+" ref_description="SGN-U341194        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:At5g43120.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:XP_470590.1) | chr5:3201519-3204710 FORWARD | Aliases: F18D22.1(evalue: 2e-62, score=235) genbank/nr: unknown(evalue: 2e-60, score=235)">
      <seq>tgcattgtgtcttcataatcctgtgaaccgtcatgccaaaagcctttggagaagagcacaggcatatgacatgcttggtttagctaaggagagcttattagatgctattctgtttataaatgagtgttcacaatcaaatgatcctgatctgtctttaaggcaaaacaaggttcctgattatgctgagcgtttggtaaaaaagcagatgcgtgcagcttggttatttagagaggctgctattaaacatggtggagttcaatgtgagggtgatgctggagacatgtgtggccaggaaactgatgattcagaatgggagacagcaagtgaaagtgaaattggaaatgaggagagagatgaaattggcgatgatatttgtggatgggaaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="2927" stop="3915"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3227" g_stop="3615" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="389" r_length="389" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U341194" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341194" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3227" e_stop="3615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATTGTGTCTTCATAATCCTGTGAACCGTCATGCCAAAAGCCTTTGGAGAAGAGCACAGGCATATGACATGCTTGGTTTAGCTAAGGAGAGCTTATTAGATGCTATTCTGTTTATAAATGAGTGTTCACAATCAAATGATCCTGATCTGTCTTTAAGGCAAAACAAGGTTCCTGATTATGCTGAGCGTTTGGTAAAAAAGCAGATGCGTGCAGCTTGGTTATTTAGAGAGGCTGCTATTAAACATGGTGGAGTTCAATGTGAGGGTGATGCTGGAGACATGTGTGGCCAGGAAACTGATGATTCAGAATGGGAGACAGCAAGTGAAAGTGAAATTGGAAATGAGGAGAGAGATGAAATTGGCGATGATATTTGTGGATGGGAAAATG</genome_strand>
        <mrna_strand>TGCATTGTGTCTTCATAATCCTGTGAACCGTCATGCCAAAAGCCTTTGGAGAAGAGCACAGGCATATGACATGCTTGGTTTAGCTAAGGAGAGCTTATTAGATGCTATTCTGTTTATAAATGAGTGTTCACAATCAAATGATCCTGATCTGTCTTTAAGGCAAAACAAGGTTCCTGATTATGCTGAGCGTTTGGTAAAAAAGCAGATGCGTGCAGCTTGGTTATTTAGAGAGGCTGCTATTAAACATGGTGGAGTTCAATGTGAGGGTGATGCTGGAGACATGTGTGGCCAGGAAACTGATGATTCAGAATGGGAGACAGCAAGTGAAAGTGAAATTGGAAATGAGGAGAGAGATGAAATTGGCGATGATATTTGTGGATGGGAAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340513" ref_strand="+" ref_description="SGN-U340513        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | peroxisomal ABC transporter (PXA1), identical to peroxisomal ABC transporter PXA1 GI:15320529 from (Arabidopsis thaliana); contains Pfam profile PF00005: ABC transporter; | chr4:18488513-18497130 FORWARD | Aliases: T5J17.20, T5J17_20(evalue: 2e-72, score=269) genbank/nr: gi|34905890|ref|NP_914292.1| simiar to ATP-binding cassette, sub-family D, member 3 [Oryza sativa (japonica cultivar-group)] gi|21902073|dbj|BAC05621.1| simiar to ATP-binding cassette, sub-family D, member 3 [Oryza sativa (japonica cultivar-group)](evalue: 3e-81, score=305)">
      <seq>ctttgatgctgatcagagattaactcaagatctggagaagctaaccgctgacttgtctagtctggtaactggaatggtgaagccaactgttgacattctatggttcacatggagaatgaaaatgctaactggccagaggggagtcgctatattgtatgcttacatgttattaggtttgggtttcctgagatgtgttactcctgactttggtgaactggcaagtcgagaacaacagcttgaaggaactttcaggttcatgcatgaaaggttgcgaacacatgctgaatctgttgctttctttggaggtggtgctcgtgaaaaagagatggttgaagcaaggtttaaagaacttcttcaccactcttctttgcttcttaagaagaaatggttatttggcataatagatgagttcatcacgaagcagcttcctcacaatgttacttggggattgagtttgttgtatgctatggagcacaagggcgaccgggctttgacttcaactcaagatgtacctgaaggtgttagttcatcgccatcctctgaggatgtaatttctttctctgaagtggacatcattacaccaggacaaaaagtcttggctaggaagctaacatgtgatatagtgaaggggaaaagccttcttgtaactggccctaatggaagtggaaagagttcaatcttcagagtccttcgtggtttatggccagtcgtgagtggaaatctagttaaaccaggccaaccgcttaactcagaattaggcagtggcatcttctatgtaccccaacgaccatatacgtgcttaggaactctaanggatcaaattacatatcctctctcacatgaagtggctgagaaaagggtacaggcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="35646" stop="42006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35946" g_stop="36047" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36048" i_stop="36126" i_length="79">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36127" g_stop="36276" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="252" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36277" i_stop="36352" i_length="76">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36353" g_stop="36425" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="325" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="36426" i_stop="39639" i_length="3214">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39640" g_stop="39820" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="506" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39821" i_stop="41269" i_length="1449">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41270" g_stop="41413" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="650" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41414" i_stop="41487" i_length="74">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41488" g_stop="41706" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="869" r_length="219" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U340513" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>869</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U340513" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35946" e_stop="36047"/>
          <exon e_start="36127" e_stop="36276"/>
          <exon e_start="36353" e_stop="36425"/>
          <exon e_start="39640" e_stop="39820"/>
          <exon e_start="41270" e_stop="41413"/>
          <exon e_start="41488" e_stop="41706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGATGCTGATCAGAGATTAACTCAAGATCTGGAGAAGCTAACCGCTGACTTGTCTAGTCTGGTAACTGGAATGGTGAAGCCAACTGTTGACATTCTATGGTAAGTTTCTTTTGTGGCTGTCAAGCTAATGTTTAAACAGTATGATTTCTGGTTTTATAGAGGTACTACTGAAATGCAGGTTCACATGGAGAATGAAAATGCTAACTGGCCAGAGGGGAGTCGCTATATTGTATGCTTACATGTTATTAGGTTTGGGTTTCCTGAGATGTGTTACTCCTGACTTTGGTGAACTGGCAAGTCGAGAACAACAGCTTGAAGGAACTTTCAGGTTACCTGATATTTTAGTTACTGCTTATCTTATTGTGTTTAGATAGGCTATGTTACACTTGAGTATCTGTTGTCAGGTTCATGCATGAAAGGTTGCGAACACATGCTGAATCTGTTGCTTTCTTTGGAGGTGGTGCTCGTGAAAAAGAGGTAGTAATATTTTTTTGCAACAATATTTTTTTCAGCAGTGGGACCGTTCAGAAATAAGATATATAGGAGCGTTTGTCTGATATTTGTGTATATGCATATACATTGAGGTGATCGTTTTCCCCTGCGACATGCTAGAGATTTGCTGGTATAGTAAATTTTGTTCCTGTTTATGCCTCCTATTTGGAAAAAAAGAAGAAGCGGGTAATAAGCTGGACTGTTTTAAGCTGTTTTCATCTCTTTGTATCTATTGCTACATATTTACATCAAGAGCTCACTGTACTTTAAGAAGTTAATTGTCGGCCCAAAAGTGGGGCTGAGATGTTACATTTAAGGATGACGTTTGACATGTCTGGATTTATGGGTAATACAAGAAGAATGCTTTTTCTATTCAATAGAATTTTTTTCTTTTTAATAGAGAAATTTGCCACAGGCTTTGAAGTGTACAAGACATGTATTGGCCTTGGCCTTTGGGTATCTATCCAGTACCTATCTTGGAGATTGTAGTAGTACGTTGTTTTTTTCTCTAGACTTACAAAGTCCAAAACAAAAGAACATGCCAAATCTAATCGACGTGACCTTCCAGACATCTTTGTTTTATCCAAGAAAAAGGTTTTTTCTTCTAAAAGTTTGGTTGATAATCTGTCCCTTTTCAAGTAAATCTAGTTGTCGTTTTATTGGCTAGTGAGGAGATGTGATCTCTGCATGCAATTCAAAATTTACTAATGCAATGTTTGGTTCTTACTTTTTGCCAGATGGAATATGGAATAAGAATGCGAGTACTTTTAGTAATTTAAGGATTTTAAAAAAACTTAAACTACAAAATGTCCTTCATTAACGTAAGCAAAATAAACATTTAAAAATTAAAGTACATTCAAATTATGGTACGTTCTTATCAAAAAAATTATGTATGGATTACTATTTCGTAGTATATCAAACTGCACATTTAACAGGGAGTAATCTCTGCATTACATTCCTTTATAACTGCCCGTGTTGGCAGTGGCGTAGCCACATCATCGGGAAAAAATACCGTATATACAAGTAAAATGATACACGAAATGATTAAGTAACATATTTTGGACAACCTTAACATAACAAGCTGTTATAGCCCAGTGGTTTCACTTCCTTAGCTTAGAATGGGGAAGTACTCGTGTGTTTGAATCTCACTAGTTCTACTTTTTTATAAGAGTTTTTGTTGTGCTATTTTTGGACACCCTTTGTGAAATTCTTGGCTCCGCCACTGCGAATTGGTGGGATGTAGCTGTACTTGATAGAATAGTCGAGATGTGCATGAATTCAGTCACCTCTGTTATGTCATAGAAAACGTGATTCTTATAAAATATTGAGTACCTATCTTGAAGCATGCATGGATATCTCAATTCCAGCCAATAATCTTCTCTACTTTTGCTTCTGCATAATTTAAGACTGTCTATTGGGATATTTGTATCGTCTGTTATCCCATTGTTTAACTACTACCTACTCTACATGTAAATTCATGGACAATATATAGCAGCTTAATGAACCTTGAGAAAAGATATGTTGACTTAATCATATGTATAAGCAAAATCTGCAGTTAATGGTCTTTGAGATGAATAACAATAGGGTAATAGCTTTACTGCCTCCAAATTTTGCATATGTAACAGCCTAAACCAGTCAATTTCCTTCATTACTTGGCCTCTATGTGTAAGCTGTATATCGAAAAAGGTTGTTTTTGTAGATAATCACATGTGTTTACTGGACTTTTCTTGTAATTGGCTGTGGAAAATGCATTTCCATTTCTTTGTTCATATATTTGTCATTCATGCTTATAATTATATTTCGTGGACTGAATATATTTATTTGTATTTTTTCTTGCTTTGCGCCTTTTCTCAATTAAAACTCACTCTTTATCTGTGCTTTGCACTTGAAGCCTTAATTGACCTTAACAGTGTTTTTCTTTTTTTTGCGTTCACTGGGTTGAATTAAGTGTAAGATCCTTCTTCTTCACTTATTGTTATGGTCAGTCTCATCACTTTTCTTGGTTTACCTAATATTGGCCCCCAATATTATATTTTCCAAGTTCTAGATGTCCAAATCTAGACGTACAGAGGGGGAGGGGGTGACATTGAGGCAATTAATGATTGTCCCCTCATATTGTTTTAAGTAATCCTCACCCTAGGAGTCAGCTTTTGGGATTGACTTTAAGCGTAAGATCTATTCTTTACACTAATCATTAGCCTTAATTTGTTAGCCATTTTTTATTTTTAAAATAAACAACATTTGAATCAAAATGGAGAAATTAAAGATATAGAGACACTGTTGTCAAAAGCACGCATAGGCCTTGAAGCGAGTCTCAAAACGTGTTGAGCACTTGGCCTCGCTTAATGTGTGCTCTAATGTTGTCATTAAAATTCTAAGACATACTTCTCTTCATCAATGAGCCTCTTTAAGGGGTGATAACTAAACAATTGATATTTCATTTTATCATTTTTTTTCTCACCTTCTTTGTTCATATATATGTCATTCATGTTTTTAATTATTTGTCTTGGACTAAACATATATATTTGTATTTGTTTCTCCCTCTTCACCCTTTTTCATTAGCCCACACTTCATTTGCGCTTAAAACCCCAACAGGCCTTAGACTTTTTTGTGCTTTTTTGCTTTTGATAAATGATCAGAGACAGACAAGGAAAGAAGAATATAAAATTGCAGCAAGAGAGATTAGGAGAGAAAGAACTATCCCGAGAAATAAGAAAAGACAGAGAGAGAGAGAGGAAAAGAAGGAAAGCTCCAAAAGAGTAGTACAATAGGCTTGATTACAGTAGTGAAGTAGGATTAATACAAGAATAATCATTGACGAAAGATGCTAAAGAGAACAAAGAAGCTTACCTGATGGGATGGAACTTATTTCTCTTTTTACCGTCTTTTAAAGTCAATACCAAATAAAAGACCTGCTTCTCACTTGTAATTCTTTTCACCCGCTGCCTGAAGCTTTGGTCTTCTATGGAGTTGCATTGCTTCACCCATGAGAAGCAACAACCTCTTGCTTTGCATCTCTCGATTGCTTTAAAGCAATGAAATGACCTCTTTTAATAATACATGTTGTTCTTGGAATATCTTTCTTTAGCTCATACTGGTAAGGATTAGTAGAGGATTCTTGATTTTGTTATGTCCTTTACTGTTTTCTTGTTTATCCAGTTACCTCTTGCACGATACTGATACATGTTATGCATGACAGATGGTTGAAGCAAGGTTTAAAGAACTTCTTCACCACTCTTCTTTGCTTCTTAAGAAGAAATGGTTATTTGGCATAATAGATGAGTTCATCACGAAGCAGCTTCCTCACAATGTTACTTGGGGATTGAGTTTGTTGTATGCTATGGAGCACAAGGGCGACCGGGCTTTGACTTCAACTCAAGGTGATTCCCAATTAACTATGAATTTGTGTATTTTTATGCTGTTAATATTTTTGTGAAAAATTACCTATTCTTTTTACTGTCCCTTTTTTTTTAGGTGAACTTGCTCATGCACTGCGATTTTTAGCATCTGTTGTGTCTCAAAGCTTTTTAGCTTTTGGTGACATTCTTGAGCTCCACAAAAAATTTGTTGAGCTTTCTGGTGGTATCAATAGAATTTTTGAGCTGGAAGAGTTTCTAGATGCTGCTCAATATGGTGGGTGTGATTTGACTTTTAATTTTCTCTTGTTTCTGTCACTTCCCTCTCTCAAATGCTCTTCCCTGGTTATAAAAATTTGTGCAACACTTAATGATTAAGCTCCGAGCATTATGCTGTAAACCTTTGAGTTGATAGGCCCGTTTGAGTCAATTGCAATAGTATTGTAGATGTCATGGTTTTGAGTGTGAAGTAGAGGCGAGCATGAACTTGGTAAAGAAATTGAAGATAGATAAATCCAATGGGAAGTTTTTTCTTTTGTTAAAAGCTTATTTGGATGGTTAATGCTAGTGAATATGCGGAAAATTCTTAGTTTTGGCTGATAAATTCTTGGGACGAAAGTGTTCATATTGAAGATGCCACAACTAGGTTATGCTAATGAATGACCAAGCCAATTTGTTCCGAGGCTTTTGATATAGTGGCGTACATAGTTGCTAGACTACGTAACATGGATTCCATGGGAACCATCTTTTATTAATAAATAGAGCTCTTTCTAGCCACACCAGAAATATGTATATCCAGTAAATAAGAATTGTTACCAATCATAATTATTTGTCTGAATATTTTACCATCTTTCTTTTCTTTTTCCTTTGAACAACATTCATGTTTCCCAGTTCTTCTATGACCTCTCTTTCTGTCAACGCCATCTAATTATCTTTTCTTCTTGATTCTTGAGAAAAAGATTATAACATCGCTGAGGATAATCGCTAGCATTGCCAGAAAAATTTGAGGGAACAAGTGTGCATCTGTAATTATTATATCTAGCACGCAAAGGAACTATGACTCAATTTCTAGGGTCAATTTTGATTTTGAACGGTTAGAACTTCACATTTACCAGAAATTGTTCGGAATTTCTGCTTATATATATGGGAAATTTGGTATAAAGTAGGTTGACATTTAGCTATAATACTGGCAACAGCCTCTCTACCTTCACATTACCTTCCCAGAGCCTACTTGTGGGATTACAATAGGTATGTTTGTTGTATTGGAATAGCAAAATCAAATAGCTGAAGCTAAATTTGTTTCCGACAAAGTCCCTGATATCTACCAGTGCTGAAAACTGCCTAAAACCATTCAGTTCTGGCATCACACATAGTGGTCTTTCCTTATCAAATTGGTTTTGGCTGTTTTGTTTAATACTAGTCTGCAGATGTTAGTATCATTGTTTGGAACTGATGTTTCTTGTATGCATGCAGATGTACCTGAAGGTGTTAGTTCATCGCCATCCTCTGAGGATGTAATTTCTTTCTCTGAAGTGGACATCATTACACCAGGACAAAAAGTCTTGGCTAGGAAGCTAACATGTGATATAGTGAAGGGGAAAAGCCTTCTTGTAACTGGTTAGTGGCCAGATCACCTTTACTTATACTTGAGTATATAGTGATATTACATGCTAACTACTTCCTTTGTGAAGGCCCTAATGGAAGTGGAAAGAGTTCAATCTTCAGAGTCCTTCGTGGTTTATGGCCAGTCGTGAGTGGAAATCTAGTTAAACCAGGCCAACCGCTTAACTCAGAATTAGGCAGTGGCATCTTCTATGTACCCCAACGACCATATACGTGCTTAGGAACTCTAAGGGATCAAATTACATATCCTCTCTCACATGAAGTGGCTGAGAAAAGGGTACAGGCTA</genome_strand>
        <mrna_strand>CTTTGATGCTGATCAGAGATTAACTCAAGATCTGGAGAAGCTAACCGCTGACTTGTCTAGTCTGGTAACTGGAATGGTGAAGCCAACTGTTGACATTCTATG...............................................................................GTTCACATGGAGAATGAAAATGCTAACTGGCCAGAGGGGAGTCGCTATATTGTATGCTTACATGTTATTAGGTTTGGGTTTCCTGAGATGTGTTACTCCTGACTTTGGTGAACTGGCAAGTCGAGAACAACAGCTTGAAGGAACTTTCAG............................................................................GTTCATGCATGAAAGGTTGCGAACACATGCTGAATCTGTTGCTTTCTTTGGAGGTGGTGCTCGTGAAAAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTGAAGCAAGGTTTAAAGAACTTCTTCACCACTCTTCTTTGCTTCTTAAGAAGAAATGGTTATTTGGCATAATAGATGAGTTCATCACGAAGCAGCTTCCTCACAATGTTACTTGGGGATTGAGTTTGTTGTATGCTATGGAGCACAAGGGCGACCGGGCTTTGACTTCAACTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACCTGAAGGTGTTAGTTCATCGCCATCCTCTGAGGATGTAATTTCTTTCTCTGAAGTGGACATCATTACACCAGGACAAAAAGTCTTGGCTAGGAAGCTAACATGTGATATAGTGAAGGGGAAAAGCCTTCTTGTAACTG..........................................................................GCCCTAATGGAAGTGGAAAGAGTTCAATCTTCAGAGTCCTTCGTGGTTTATGGCCAGTCGTGAGTGGAAATCTAGTTAAACCAGGCCAACCGCTTAACTCAGAATTAGGCAGTGGCATCTTCTATGTACCCCAACGACCATATACGTGCTTAGGAACTCTAANGGATCAAATTACATATCCTCTCTCACATGAAGTGGCTGAGAAAAGGGTACAGGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333085" ref_strand="-" ref_description="SGN-U333085        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | peroxisomal ABC transporter (PXA1), identical to peroxisomal ABC transporter PXA1 GI:15320529 from (Arabidopsis thaliana); contains Pfam profile PF00005: ABC transporter; | chr4:18488513-18497130 FORWARD | Aliases: T5J17.20, T5J17_20(evalue: 2e-33, score=139) genbank/nr: gi|18420546|ref|NP_568072.1| peroxisomal ABC transporter PXA1 [Arabidopsis thaliana] gi|15320529|gb|AAK95343.1| peroxisomal ABC transporter PXA1 [Arabidopsis thaliana] gi|20803766|emb|CAC85290.1| ABC transporter [Arabidopsis thaliana](evalue: 1e-31, score=139)">
      <seq>gagaacaacaacgattaggaatggcacgcttattttttcacaagccacggtttggaatccttgacgaatgtacaaatgctactagtgttgatgttgaagaacacctgtataggcttgctaaggatgctggcattactgttgttacatcctcacagcgccctgctttaatacctttccattctgtggaattacggttgattgatggtgaaggcaagtggcagctgctttcaattaagatggatgaggagggggaagacgaaccaaatgaatacacacaacaattgtgagtacgatgatgtattccaatgttgtgaaaacgttcatagagccaaaaataatgaatgaattatgaatgtaatagtttgcagttagattgagggtaggaaactatatagttagggtatacaaaaactattttaagttgtttcttgtaatatttcatatagttaactgtgtatagcgcctagttcccgtcgttgtaaaaggtttaggcataatctttccggtcagctctccgtgaataaaaatggcaggtagaaaaggaggctgacagattaatttacttatattatcttctacattttacaatgtattttgatgatatttttctgtttaaatataccaaaaatttaatggagtgtatatttttgccctctctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="43652" stop="45216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43952" g_stop="43974" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43975" i_stop="44078" i_length="104">
            <donor d_prob="0.960" d_score="0.00"/>
            <acceptor a_prob="0.827" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44079" g_stop="44131" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="76" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44132" i_stop="44232" i_length="101">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44233" g_stop="44311" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="155" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44312" i_stop="44406" i_length="95">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.715" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44407" g_stop="44909" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="658" r_length="503" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="659" polyA_stop="689"/>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U333085" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333085" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="43952" e_stop="43974"/>
          <exon e_start="44079" e_stop="44131"/>
          <exon e_start="44233" e_stop="44311"/>
          <exon e_start="44407" e_stop="44909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAACAACAACGATTAGGAATGGTGAGCTCAAAAAGTGCTGATTATTTTCTGACCCAAAAACTTTGTTTAGAAATATATTTCATATTTTGTTTCTTTGCTGCTAACTGATTTGGCATTTCTACAAGGCACGCTTATTTTTTCACAAGCCACGGTTTGGAATCCTTGACGAATGTACAAAGTAAGTAAACAAGCTCAGATCTCAGTGTTCTCCAATTAGCATATGGAAGCTTTTCTATGACCTCGTATACCTGACCTTGCTATTTCCTCTTCTATTTGCAGTGCTACTAGTGTTGATGTTGAAGAACACCTGTATAGGCTTGCTAAGGATGCTGGCATTACTGTTGTTACATCCTCACAGGTTTGCATCCATGTCTCATATTGTCATCGGCATTTCTTATGGCCATCATCAACCCATCTCTTATCCAACTTTTTTCTTGCTCTGTTTTTCCTCAGCGCCCTGCTTTAATACCTTTCCATTCTGTGGAATTACGGTTGATTGATGGTGAAGGCAAGTGGCAGCTGCGTTCAATTAAGATGGATGAGGAGGGGGAAGACGAACCAAATGAATACACACAACAATTGTGAGTACGATGATGTATTCCAATGTTGTGAAAACGTTCATAGAGCCAAAAATAATGAATGAATTATGAATGTAATAGTTTGCAGTTAGATTGAGGGTAGGAAACTATATAGTTAGGGTATACAAAAACTATTTTAAGTTGTTTCTTGTAATATTTCATATAGTTAACTGTGTATAGCGCCTAGTTCCCGTCGTTGTAAAAGGTTTAGGCATAATCTTTCCGGTCAGCTCTCCGTGAATAAAAATGGCAGGTAGAAAAGGAGGCTGACAGATTAATTTACTTATATTATCTTCTACATTTTACAATGTATTTTGATGATATTTTTCTGTTTAAATATACCAAAAATTTAATGGAGTGTATATTTTTGCCCTCTCT</genome_strand>
        <mrna_strand>GAGAACAACAACGATTAGGAATG........................................................................................................GCACGCTTATTTTTTCACAAGCCACGGTTTGGAATCCTTGACGAATGTACAAA.....................................................................................................TGCTACTAGTGTTGATGTTGAAGAACACCTGTATAGGCTTGCTAAGGATGCTGGCATTACTGTTGTTACATCCTCACAG...............................................................................................CGCCCTGCTTTAATACCTTTCCATTCTGTGGAATTACGGTTGATTGATGGTGAAGGCAAGTGGCAGCTGCTTTCAATTAAGATGGATGAGGAGGGGGAAGACGAACCAAATGAATACACACAACAATTGTGAGTACGATGATGTATTCCAATGTTGTGAAAACGTTCATAGAGCCAAAAATAATGAATGAATTATGAATGTAATAGTTTGCAGTTAGATTGAGGGTAGGAAACTATATAGTTAGGGTATACAAAAACTATTTTAAGTTGTTTCTTGTAATATTTCATATAGTTAACTGTGTATAGCGCCTAGTTCCCGTCGTTGTAAAAGGTTTAGGCATAATCTTTCCGGTCAGCTCTCCGTGAATAAAAATGGCAGGTAGAAAAGGAGGCTGACAGATTAATTTACTTATATTATCTTCTACATTTTACAATGTATTTTGATGATATTTTTCTGTTTAAATATACCAAAAATTTAATGGAGTGTATATTTTTGCCCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322792" ref_strand="+" ref_description="SGN-U322792        Tomato 200607 #1 [7 ESTs aligned] genbank/nr: gi|15144516|gb|AAK84483.1| putative copia-like polyprotein [Lycopersicon esculentum](evalue: 2e-16, score=90.1)">
      <seq>cagagtttatgatacgccgaaagcgtaatagaccaattgattccaaatataaaattccttaaagaaggaaggagcaaatgatcaatatggtcatgataatgaggcaagtgctataaaggagcacattgacataacacttcataaaatcttgaaaaaggttcaggtacctgaaataatgaaaaaaattgaagagatctcgataagttatgtcttgttggaatcgatatcaaataaccgtcgacggtatctttgatatgaggtagcgctcaatgatataaattgtgatgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtgaataaatcgcattcattgagtaccccaatgattatgagattacttgacataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttactaacaatattattccagatatttgttttgcagtaaatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="65511" stop="67194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65811" g_stop="66894" g_length="1084"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1099" r_length="1099" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U322792" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>1084</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65811" e_stop="66894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGTCTATGATACGCCGGAAGCGTAATAGACCAATCAATTCCAAATATAAAATTCCTTGAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAAGAGCACATTGACATAACAATTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATG--AAAAA-TGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATGAGGTAGCGCTCAATG------A---T-AT-A--ATCTTGAATTCAAATCTGTCATATAGTGTGAACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACTGTAAGATATCAAATACGATTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTAGTGGAGATGTTTTCTCCTTTGGTGGATGAAATGAGGTTTGTTTTGATCTGGCAACATATGAAAA-CTTGAATGCATGTAAATGAATAATTTTAATGTCTAGCTAGACAATGAATGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAATATATTTGTCTAACAGTGCACATACACTGAAAATTTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGGCATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACCAGATATTTGTTTTGCAGTAAATTTACT</genome_strand>
        <mrna_strand>CAGAGTTTATGATACGCCGAAAGCGTAATAGACCAATTGATTCCAAATATAAAATTCCTTAAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAGGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAAAATTGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATGAGGTAGCGCTCAATGATATAAATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGT-AATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGAATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATTACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316800" ref_strand="+" ref_description="SGN-U316800        Tomato 200607 #1 [11 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:18499838-18501636 FORWARD | Aliases: T5J17.30, T5J17_30(evalue: 1e-106, score=383) genbank/nr: gi|15236057|ref|NP_195696.1| expressed protein [Arabidopsis thaliana] gi|7487706|pir||T06092 hypothetical protein T5J17.30 - Arabidopsis thaliana gi|4490737|emb|CAB38899.1| putative protein [Arabidopsis thaliana] gi|7271041|emb|CAB80649.1| putative protein [Arabidopsis thaliana](evalue: 8e-105, score=383)">
      <seq>tttgttttataagataaagcaaagacttcccattttcaaatttcagctaaaatggagagagcaacacctgtacggaagcctaacacctctgccgccgatctgctcacctggtctgaagttccgccggcgaacaactcagcttctgcctccggcaatgcatctcgctccggcgctcgttctcatcagccttctgatggaatcagtaaggttctgtttggaggtcaaattactgaagaggaagctgagagcttgaacaaacgtaaaccatgttcagggtacaaactgaaggagatgaatggcagcaaaatcttttctgctgatggtgaagatgatgcatctgaatcaggagctgttaatggtaacttcaacaacaggacatctgtccgcattgttcagcaagctgcaaatggaataagccagatatcattcagtactgaagaaaggatctctccaaagaaacctatcacacttacagaagtggcaaaacagagagagttgagcggaacactagaaagtgattcagatagcaatatgaagaagcagctttcagatgcaaagagcaaggaactcagtggaaatgacatatttggccctcccgcagaaattcctcctagatctttggctgctgcccgatccatagagtcaaaagaaagcaaagacatgggtgaacctgctccacgacttgtacgtacgtctgtcaaggtttctaatcctgctggtggtcaaagcaatattttgtttggtgatgaacctgttgtcaacacagtaaagaaaatacataaccagaagtttgcagagttgaccggcaatgacattttcaagggagatattcctcctggatctgcagaaaagccactgagcagagcaaagctgagagaaatgagtggaaatgatattttttctgatggaaaagttgaatccagagattattttggtggcgttcgtaaaccaccaggcggagaaagcagcatcgcgctggtttagataaatgtcatcagactgctgctatgtttgacctgtagtgttcctgcaacatttcacttctaatgtttcatgggttttagaattgagggttgtagatgatatgtgtttaaccatgttgtacggacaacttctaaactataatttacataaacttggaggatttgcctaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="67985" stop="71760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68285" g_stop="68470" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68471" i_stop="68545" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68546" g_stop="68619" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="260" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68620" i_stop="70353" i_length="1734">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.903" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70354" g_stop="70489" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="396" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70490" i_stop="70612" i_length="123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70613" g_stop="70927" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="711" r_length="315" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70928" i_stop="71014" i_length="87">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="71015" g_stop="71460" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="1157" r_length="446" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1158" polyA_stop="1173"/>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U316800" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1157</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68285" e_stop="68470"/>
          <exon e_start="68546" e_stop="68619"/>
          <exon e_start="70354" e_stop="70489"/>
          <exon e_start="70613" e_stop="70927"/>
          <exon e_start="71015" e_stop="71460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTTTTATAAGATAAAGCAAAGACTTCCCATTTTCAAATTTCAGCTAAAATGGAGAGAGCAACACCTGTACGGAAGCCTAACACCTCTGCCGCCGATCTGCTCACCTGGTCTGAAGTTCCGCCGGCGAACAACTCAGCTTCTGCCTCCGGCAATGCATCTCGCTCCGGCGCTCGTTCTCATCAGGTGAATTATATTGTGACTTGTGTTGTTTGCTTTTATGATTTGCTAGAGTTTAATTTATATGCTATTATATTGTAGCCTTCTGATGGAATCAGTAAGGTTCTGTTTGGAGGTCAAATTACTGAAGAGGAAGCTGAGAGCTTGAACAAACGGTATGTACTGATCTGAAAAGCGAAATGATTTTTTCATTTGTTTAATTTATCGTCACATTTTGCTTGGAATTTAATCTTTTTTTTTTATAAGTAGTGTGTTTTTCTAATATGTGATTTATCCTGATGCTTGTATTACAAAGTTCAGATCTTCCCCTGAGTTCTCCGAAATTTTCTATTTTGTTTCTGAAGCTTCTATAATTTCTTAGATCTAGTAATGCAATTTCTTTTTTGGTGTGTTTGGTAGAGAGGAAAATGTTTTCACTTGTTTGCTGGAGTTTGGTAAATACTGTCTAAAGAGCATTTATGTATAAAAGGAGGAAAGAAAAGATCTGAGCATATATACTATGACACTGGACCCTTGTCCCAACATAGACATGATCTAAACCCCACTCTGAACTGGACAACCAATCTCAGTCATGATCTGGGACCCGTTGTTGACTCGATAACTAACCCCGACCTAATTCAAATCGAGATTGGAGGCAGGATCCTGACCCCATCTGGGTCAAGGTTGCTCTTGACTTGGGATTCCAGGTTGGGGTGGGGTCTCGGGTATGGATCAAGAGTTGGGGTTGGATCCTGAGTGGGGTCAAGTGTTTGGTCTTAGGTTGAGGTCTTAAGTCTTTTTCGGGGTTGGGAGTCAAGTCTTGGGTTGAGGTCTTGAGTATAGGGAGTCGTGTCCTTGGTTGGGAGTTAGGTCTAGGTTGGAGACCGTTCTGAAAAATATTTTTCTAACTTTGTATAATTAGTCATTTTCCTATAATAGAAGGAAAGTGAATTCGTTTGGAAAACATTGACAAATTAAATTTTACACGCCCTTAACTTTCTTGTTATAGTCTGTTGCGTTTCCTTGTTGAGCTGCTCTGGGATTTGGATAGCACATCTAAAATCTATTGATGAGTATATCAATTAAAATGGTTTCACTAATAAGTGATGAGAGAAGCATTCTTTTCTATAGATCAATTTCATTTGATTCTGTTTAAGGTTTATAAAGAAACTGTGATTGACATCATTAAAGTGTTAAAATGGAAACATTTCTTAGTGAAAAGTGCACCTTAGACTTATTTTTGTTATAATCATATTGATTATCCTCTTCTTATTTTTTTATTGAGTTTCTTGAAGCCGGACTGTCATATTTATTATCACTCTCTTCCACATTCTAATTCCAAAACTAAAAATCAGACTTTTTTTCTGATATGTAAGAGTTACATGGCTGCTACTAATATTTTTGGTAGACTGGTAAAAATATGCACCTACTCTGCATTCTGCATATTAGATATCCCGATCTCCATGTCCTTTCTTTCGATTCTTTGCTTATCATGATTTAGTATTCAGAGACCTGTGGTGAGGTACTGTTGTGGAGTTCCGACCAATGGAAGTAATCCCATTAATTTAAGAAACTGAAAAGACATGCTATTTTCTGATATGGTCACCCGAAACATTGCAGCCATTCTAGAAAATTAGCTCTATGCTATATATATTCTTGCTTTTAGACGGGCGCAAATTTAGCTGATTTGAAATGTAGCATGCAAGTTAAGTGAAGCTTCTCTATCAAAAGACTCAGAAAGTTGAGAGGTTCCAATGTTTGGACATGTGGAATACATTTTTGGGGTTTACTTTTCATTGATATCGAGAGGTTCCAATGTATGGAAAAGAAAAGAAAGAGTCCAGTGACCTTAATGGTTTTGAAGTAAATGTTATCTGGTCCTTATTCTGCTTGAAACATGCTTTCTCCAGTAAACCATGTTCAGGGTACAAACTGAAGGAGATGAATGGCAGCAAAATCTTTTCTGCTGATGGTGAAGATGATGCATCTGAATCAGGAGCTGTTAATGGTAACTTCAACAACAGGACATCTGTCCGCATTGTTCAGGTACTATTTAAATCATTATACGGTAAAATTATGTTTTACAGGACTTGCTGTGTGAGCATGCTACAAAGTCAGGAAACTAGTAACTGGCAACTTCACCGTCTAATGATTTGTAATTCATTGCAGCAAGCTGCAAATGGAATAAGCCAGATATCATTCAGTACTGAAGAAAGGATCTCTCCAAAGAAACCTATCACACTTACAGAAGTGGCAAAACAGAGAGAGTTGAGCGGAACACTAGAAAGTGATTCAGATAGCAATATGAAGAAGCAGCTTTCAGATGCAAAGAGCAAGGAACTCAGTGGAAATGACATATTTGGCCCTCCCGCAGAAATTCCTCCTAGATCTTTGGCTGCTGCCCGATCCATAGAGTCAAAAGAAAGCAAAGACATGGGTGAACCTGCTCCACGACTTGTACGTACGTCTGTCAAGGTTTCTAATGTGAGTTGTGTACTAGACATGTTTTCTTATTCTCATTTCTGTCTACAGACTTGTTATGTGTTCTCATGTGGCTGTCCTACTTTGTAGCCTGCTGGTGGTCAAAGCAATATTTTGTTTGGTGATGAACCTGTTGTCAACACAGTAAAGAAAATACATAACCAGAAGTTTGCAGAGTTGACCGGCAATGACATTTTCAAGGGAGATATTCCTCCTGGATCTGCAGAAAAGCCACTGAGCAGAGCAAAGCTGAGAGAAATGAGTGGAAATGATATTTTTTCTGATGGAAAAGTTGAATCCAGAGATTATTTTGGTGGCGTTCGTAAACCACCAGGCGGAGAAAGCAGCATCGCGCTGGTTTAGATAAATGTCATCAGACTGCTGCTATGTTTGACCTGTAGTGTTCCTGCAACATTTCACTTCTAATGTTTCATGGGTTTTAGAATTGAGGGTTGTAGATGATATGTGTTTAACCATGTTGTACGGACAACTTCTAAACTATAATTTACATAAACTTGGAGGATTTGCCTAACATA</genome_strand>
        <mrna_strand>TTTGTTTTATAAGATAAAGCAAAGACTTCCCATTTTCAAATTTCAGCTAAAATGGAGAGAGCAACACCTGTACGGAAGCCTAACACCTCTGCCGCCGATCTGCTCACCTGGTCTGAAGTTCCGCCGGCGAACAACTCAGCTTCTGCCTCCGGCAATGCATCTCGCTCCGGCGCTCGTTCTCATCAG...........................................................................CCTTCTGATGGAATCAGTAAGGTTCTGTTTGGAGGTCAAATTACTGAAGAGGAAGCTGAGAGCTTGAACAAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACCATGTTCAGGGTACAAACTGAAGGAGATGAATGGCAGCAAAATCTTTTCTGCTGATGGTGAAGATGATGCATCTGAATCAGGAGCTGTTAATGGTAACTTCAACAACAGGACATCTGTCCGCATTGTTCAG...........................................................................................................................CAAGCTGCAAATGGAATAAGCCAGATATCATTCAGTACTGAAGAAAGGATCTCTCCAAAGAAACCTATCACACTTACAGAAGTGGCAAAACAGAGAGAGTTGAGCGGAACACTAGAAAGTGATTCAGATAGCAATATGAAGAAGCAGCTTTCAGATGCAAAGAGCAAGGAACTCAGTGGAAATGACATATTTGGCCCTCCCGCAGAAATTCCTCCTAGATCTTTGGCTGCTGCCCGATCCATAGAGTCAAAAGAAAGCAAAGACATGGGTGAACCTGCTCCACGACTTGTACGTACGTCTGTCAAGGTTTCTAAT.......................................................................................CCTGCTGGTGGTCAAAGCAATATTTTGTTTGGTGATGAACCTGTTGTCAACACAGTAAAGAAAATACATAACCAGAAGTTTGCAGAGTTGACCGGCAATGACATTTTCAAGGGAGATATTCCTCCTGGATCTGCAGAAAAGCCACTGAGCAGAGCAAAGCTGAGAGAAATGAGTGGAAATGATATTTTTTCTGATGGAAAAGTTGAATCCAGAGATTATTTTGGTGGCGTTCGTAAACCACCAGGCGGAGAAAGCAGCATCGCGCTGGTTTAGATAAATGTCATCAGACTGCTGCTATGTTTGACCTGTAGTGTTCCTGCAACATTTCACTTCTAATGTTTCATGGGTTTTAGAATTGAGGGTTGTAGATGATATGTGTTTAACCATGTTGTACGGACAACTTCTAAACTATAATTTACATAAACTTGGAGGATTTGCCTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314161" ref_strand="+" ref_description="SGN-U314161        Tomato 200607 #1 [53 ESTs aligned] arabidopsis/peptide: | Symbol: None | annexin 2 (ANN2), identical to annexin (AnnAt2) (Arabidopsis thaliana) GI:4959108 | chr5:25991047-25992952 FORWARD | Aliases: MXK3.27, MXK3_27(evalue: 2e-129, score=459) genbank/nr: gi|3378204|gb|AAC97493.1| annexin p35 [Lycopersicon esculentum] (evalue: 1e-168, score=596)">
      <seq>cataaaagttatgttacgttacaaaaataataaaatcgtgtatcccaatgacttttgcgatggcaaaaaatgtctgaatccactttttatgttcccacgtatattcttgagattgtacatatactatagttttgactcataaataattcaagaacacacagcacattctcaagaaagggaaaaaaaatgtctagtcttaaagttccagcatcagttccagatccttatgaagatgctgagcaactcaaaaaagcttttaaaggatggggcacaaatgaggaacttattattcagattctggctcataggaatgcagcacaacgcaagttaatccgagattcttatgctgctgcttatggagaggatcttctcaaggacttggattctgaactgacaagtgattttcagcgtgtggtgcttctctggactttgagtcctgctgagcgcgacgcctacttggttaatgaggctaccaaacgtctgactgctagcaattgggttatcatggaaattgcttgtaccaggtcttctgatgatctttttaaggcgaggcaggcctaccatgctcgatacaagaaatcacttgaagaagatgttgcttatcatacaagtggggatttccgtaagcttttggttcctcttataactgcattcagatatgaaggagatgaggtgaacatgacattagcaagaaaggaagcaaatatactgcatgagaagatctctgacaaggcttacaatgacgaggagatcatccgaatcatttctactaggagtaaagcacagctgagtgctacgttcaaccactacaatgatcaccatggccatgaaatcatcaaggatctggaagctgatgatgacgatgagtacctgaaactactcagagcagcaatagaatgcttgaaaaccccagagaaacactttgagaaagttcttcgattggctatcaagaagctgggtacagacgaatgggatcttactagagttgttgccactcgggctgaagttgacatggagcgtatcaaagaagagtaccataggaggaacagtgttacattggaccgtgcaattgctggagacacttcaggagactatgaaaaaatgcttctggctctgattgggcacggagatgcttgaattacatgtgctgaaaccttaagataataaaaaaaactctacttattttctgaagtttgaatttgcttttatgatgtatggtgtgtactctcagagtttggttctgtgtttatatgaactaaaaacactcgggagttgagttgtgttttgttttcgccttcacttttcatttcggacttctactggttttgcctgctaaataagcatagcttcaactttggcttgaacggatcttgtttctttataactcagaaatagattatgtatcttggttcgtaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="-" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="75624" stop="71285"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75324" g_stop="75063" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75062" i_stop="73804" i_length="1259">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.568" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73803" g_stop="73658" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="408" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73657" i_stop="73449" i_length="209">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73448" g_stop="73230" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="627" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73229" i_stop="72461" i_length="769">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.613" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72460" g_stop="72248" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="840" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="72247" i_stop="72160" i_length="88">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72159" g_stop="71586" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="841" r_stop="1414" r_length="574" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1415" polyA_stop="1434"/>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="-" ref_id="SGN-U314161" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1414</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U314161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75324" e_stop="75063"/>
          <exon e_start="73803" e_stop="73658"/>
          <exon e_start="73448" e_stop="73230"/>
          <exon e_start="72460" e_stop="72248"/>
          <exon e_start="72159" e_stop="71586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAAAGTTATGTTACGTTACAAAAATAATAAAATCGTGTATCCCAATGACTTTTGCGATGGCAAAAAATGTCTGAATCCACTTTTTATGTTCCCACGTATATTCTTGAGATTGTACATATACTATAGTTTTGACTCATAAATAATTCAAGAACACACAGCACATTCTCAAGAAAGGGAAAAAAAATGTCTAGTCTTAAAGTTCCAGCATCAGTTCCAGATCCTTATGAAGATGCTGAGCAACTCAAAAAAGCTTTTAAAGGTTTCACTTTTTTTTTCTTCCAGATCCCCTTTGGTTGGATTTTGTATGCCTGATTTTAGTGCAAGATTTCTTTTCTATATTTGCATTTGCTATTTTTCTTGAATGATCAGTTGATTTTTACTTTTCCTTACTGTTTTTTCCTAGTTTAGTTTAGTTTTAGTTCTTGATGGGGTTCTTGTGATCTGAATGATCTATTCAAAATTGTTTCGAAATGTAACATAGACCATCTGCTGACTCTAAATCTTGAATCTGTCTCGGTTAGGTAAAATGCTGTGTGATTTTTTATTTAATTCATTGTTGGAGGAAATTAGTGATCTTTGACTGTAGGCATATGTAGAAGACATTTTTCTTTATGATTCTGTGTAGTCATTTCCCAAACGTATGATTGGTCTAGATTATTAATTTGTTGACAAAAATGATTAACTCCAATTCTCCGTGGTGGTTAGGCTGATTATGATGTATGGGGCGAGTGGAGTGTTGGTTAGTTAAGAATTCTAATGTCAAAAGATATGAGGTGGCGAAAATGAGGACGCTGAGGTGGATGTGGATATGTAGGAGAGATAAAGATTAAGAATGAAGATATCCAACATAACGTGGGAGTGGCTTCCGTGATGGACAAGATGAGGGAAGTGAGACTGAGATGGTTTAGACATGATATGTGAAGAGGAGGTGCACAGCGATCTAGGGAGAAATGTTAGAGGTTGGCCGTAGTGAGTTTTAGGAGACGTAGAGGGAAACCAAAAAAGTGTTGGGAGGGGTGATTAGACAAAACATGACGCAACTTCAGCTTTCCGATGATATGATTCTAGATTGAAGGTTATGGAGGTCACGGATTAGGGTAGAAGGTTAGTAAATAGTTGAATGTTGTCTCGTTTCCAAGGGGATAGCTTGGTGGTAGTTTTGTTTCATTGTACCTATTTCCCCAGTAATACAAGTAGTAGTAGCATTTTCTCATAGTTGTCTGTCTTGCAATTTTTGTTGCTCGTTATTTACTGTGCTTCTGTTATCACATTAGTTGGTTATTGTTATTGCTCTTGTTTTTTGAATGCTCTAGGTTATGCTTTCCCTTTAATTTTCAATGTCCTGTTACTCTGTTGTGTGTTTTGGGAACAGCCTATCTACCTCCACGAGGTAGGGTTTAGGTTCCTCCCCAGACCCCGACTATGGGACTACATCGAGTTTGCTGTTGTTGTTTGGGCTTGCAAAGCAGGAAGCTGAATTTTGTTTTCCACAGAAGACTCATGGTTAAACGTTTGCAGGATGGGGCACAAATGAGGAACTTATTATTCAGATTCTGGCTCATAGGAATGCAGCACAACGCAAGTTAATCCGAGATTCTTATGCTGCTGCTTATGGAGAGGATCTTCTCAAGGACTTGGATTCTGAACTGACAAGTGATTTTCAGGTTAATTAATCTCAATTTTCCATTCTTGTTCCAAATTGTGTTGGAGTACACCCCGTTTAATCAATCATTGTGGTGTATTGAATGTTTTTCTTTTTGTTCATTTATACTTTCTTAGATTTGTCTAGTCCATATCTACATTATTAATCACAGGTAACATTAGCCAAGGATTGCTTTGACTAATATATAATTTGATTCACATGATATTGCAGCGTGTGGTGCTTCTCTGGACTTTGAGTCCTGCTGAGCGCGACGCCTACTTGGTTAATGAGGCTACCAAACGTCTGACTGCTAGCAATTGGGTTATCATGGAAATTGCTTGTACCAGGTCTTCTGATGATCTTTTTAAGGCGAGGCAGGCCTACCATGCTCGATACAAGAAATCACTTGAAGAAGATGTTGCTTATCATACAAGTGGGGATTTCCGTAAGGTACTTCGCATATAAGATCTACTGTGCCACATTTAATTCATTGTTATTCTAGTGCCAGTCAACTTTGTCATTAGATCAGCTGTAGAGAAAAACCTATAGTCAGCCGAAGTTTGCTAAAGAATCTGCCACTTTGTTGTTTTCTATAAATCTATAGACGATTCTGAAATTACTAGCCGAGAATTTGGATGAAATGAAGCTCCACCATGAGTCTAGGTATCGGCAATTCTTGGGGCTTTTTTATTTTCATTGAAGCGATTATTTGACTGTTTAGTGATTCGAGAACCAGAAGATCATTTTGCCTAGTAAAGCTCATCAACTCTTCTTTTTGCTCGTTGTGACTTCTTAAGGATGATTCTTTCTACCATGTAAGCTGTTGCACTTGCGCCTATTTGCCACCTTTGGGGTGTTTAAGATGAATGATAAACGGTGACAAGTGATGGATAGTCTCCGGTTACGACCATCCACCTCCAGCCATAACGTTGGGGGTTAACCTCACCAAGGGAGCGAAGTGGAGAAGGATCACCGTTGTTGTGCTCTTGAGCCAGGGGAAACTGAGGTTACGGTTTACTGTGTCCAAAAAATAAAATAAAAGGTTTAAGGATGATAGTGTCTGAGATAACAGTGTAAATAGTTAGATAAGCACCTTAAAGTTAGATTTTTGTGTTGTCTGTCTTTGTCTCCAGTGAATACTGAGAATACATGCAACAAATAAATCTTGCAATCACCGTCGTTAAGCTGGTCATATTGTATTAAACTAATTCCCGAACAGCTTTTGGTTCCTCTTATAACTGCATTCAGATATGAAGGAGATGAGGTGAACATGACATTAGCAAGAAAGGAAGCAAATATACTGCATGAGAAGATCTCTGACAAGGCTTACAATGACGAGGAGATCATCCGAATCATTTCTACTAGGAGTAAAGCACAGCTGAGTGCTACGTTCAACCACTACAATGATCACCATGGCCATGAAATCATCAAGGTAAAACTCAAACATTAGAAAGACTTGAAATTATGTTAGTTACCATTGTTTAAAAGGGATCTATTCATTGTACTGTGTGATGATGCAGGATCTGGAAGCTGATGATGACGATGAGTACCTGAAACTACTCAGAGCAGCAATAGAATGCTTGAAAACCCCAGAGAAACACTTTGAGAAAGTTCTTCGATTGGCTATCAAGAAGCTGGGTACAGACGAATGGGATCTTACTAGAGTTGTTGCCACTCGGGCTGAAGTTGACATGGAGCGTATCAAAGAAGAGTACCATAGGAGGAACAGTGTTACATTGGACCGTGCAATTGCTGGAGACACTTCAGGAGACTATGAAAAAATGCTTCTGGCTCTGATTGGGCACGGAGATGCTTGAATTACATGTGCTGAAACCTTAAGATAATAAAAAAAACTCTACTTATTTTCTGAAGTTTGAATTTGCTTTTATGATGTATGGTGTGTACTCTCAGAGTTTGGTTCTGTGTTTATATGAACTAAAAACACTCGGGAGTTGAGTTGTGTTTTGTTTTCGCCTTCACTTTTCATTTCGGACTTCTACTGGTTTTGCCTGCTAAATAAGCATAGCTTCAACTTTGGCTTGAACGGATCTTGTTTCTTTATAACTCAGAAATAGATTATGTATCTTGGTTCGT</genome_strand>
        <mrna_strand>CATAAAAGTTATGTTACGTTACAAAAATAATAAAATCGTGTATCCCAATGACTTTTGCGATGGCAAAAAATGTCTGAATCCACTTTTTATGTTCCCACGTATATTCTTGAGATTGTACATATACTATAGTTTTGACTCATAAATAATTCAAGAACACACAGCACATTCTCAAGAAAGGGAAAAAAAATGTCTAGTCTTAAAGTTCCAGCATCAGTTCCAGATCCTTATGAAGATGCTGAGCAACTCAAAAAAGCTTTTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGGGCACAAATGAGGAACTTATTATTCAGATTCTGGCTCATAGGAATGCAGCACAACGCAAGTTAATCCGAGATTCTTATGCTGCTGCTTATGGAGAGGATCTTCTCAAGGACTTGGATTCTGAACTGACAAGTGATTTTCAG.................................................................................................................................................................................................................CGTGTGGTGCTTCTCTGGACTTTGAGTCCTGCTGAGCGCGACGCCTACTTGGTTAATGAGGCTACCAAACGTCTGACTGCTAGCAATTGGGTTATCATGGAAATTGCTTGTACCAGGTCTTCTGATGATCTTTTTAAGGCGAGGCAGGCCTACCATGCTCGATACAAGAAATCACTTGAAGAAGATGTTGCTTATCATACAAGTGGGGATTTCCGTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGGTTCCTCTTATAACTGCATTCAGATATGAAGGAGATGAGGTGAACATGACATTAGCAAGAAAGGAAGCAAATATACTGCATGAGAAGATCTCTGACAAGGCTTACAATGACGAGGAGATCATCCGAATCATTTCTACTAGGAGTAAAGCACAGCTGAGTGCTACGTTCAACCACTACAATGATCACCATGGCCATGAAATCATCAAG........................................................................................GATCTGGAAGCTGATGATGACGATGAGTACCTGAAACTACTCAGAGCAGCAATAGAATGCTTGAAAACCCCAGAGAAACACTTTGAGAAAGTTCTTCGATTGGCTATCAAGAAGCTGGGTACAGACGAATGGGATCTTACTAGAGTTGTTGCCACTCGGGCTGAAGTTGACATGGAGCGTATCAAAGAAGAGTACCATAGGAGGAACAGTGTTACATTGGACCGTGCAATTGCTGGAGACACTTCAGGAGACTATGAAAAAATGCTTCTGGCTCTGATTGGGCACGGAGATGCTTGAATTACATGTGCTGAAACCTTAAGATAATAAAAAAAACTCTACTTATTTTCTGAAGTTTGAATTTGCTTTTATGATGTATGGTGTGTACTCTCAGAGTTTGGTTCTGTGTTTATATGAACTAAAAACACTCGGGAGTTGAGTTGTGTTTTGTTTTCGCCTTCACTTTTCATTTCGGACTTCTACTGGTTTTGCCTGCTAAATAAGCATAGCTTCAACTTTGGCTTGAACGGATCTTGTTTCTTTATAACTCAGAAATAGATTATGTATCTTGGTTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322948" ref_strand="+" ref_description="SGN-U322948        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: AT4G39870.1 | Symbol: None | expressed protein, hypothetical protein, Schizosaccharomyces cerevisae, Z99168 | chr4:18501889-18504422 FORWARD | Aliases: T5J17.40, T5J17_40 (evalue: 2e-83, score=306) genbank/nr: gi|22045256|gb|AAL38841.2| unknown protein [Arabidopsis thaliana](evalue: 2e-81, score=306)">
      <seq>ctttctcctaatattccacccactttccttttcctttttaggtatattctcaactctttttcaccattaatggcgttttagagcatcacaaaccccaaaaaagtagtggaatttgttgttgtcataaaggagaatactacttatagctttttagaagtaatgggtagtgaaaatcaacagcaatttgaagagaatcttcttcataatcataatcatcaggagcagcagcagcagcagaggaagaaccgttctttaaggagtaaagctgcgcactttgtatcggatgttgctactgttattcttaaccccatatctgataaacccttaaagcccagaccaccacctttgcctgaagatggatctgattctgacggaagtaagcatgagtcaaatgcagagctcttcaccaagttgctagactaggcggctttaggaatcagggttcggcaaagggcagctctgatatggtgtttgatgatggaagtaattctaaagtttccggagataatcaaatacctttggaagatatgaataagaaacctcttctgaacaatcttccgggaacttctgagccttcagttctcctcactgagaaggcacgaatttctctttatgctgcactgcctgtgcttgtgcaggacaggaagtgggtcttgttatacagtacatggaagaatggaatatcactctcgactttatacaggagaagcctactctggcctggcatcagtctgctggttgtgggggaccataatggtgctgtgtttggtgggctagttgatgcacctttaaagccaacaacaaagagaagatatcagggtacaaacaattcatttgttttctcaaatgtatctggccaacctgtcatatttcgtcccacaggtgtcaatcgctattttactgtctgttccacggagtatttagctttgggaggcggtggccattttgctctctacttagacggggatctgctaacaggttcaagtgcaacatcagaaacttatggaaattcttgtttggcacatactgaagactttgaagttaaggaagttgagttatggggctttgtatatgcttccaagtatgaagagatggtttcgattttgcgaacagagacacctggaatttgccgctggtaaacacagtgttaaagatgcttgctttccagtctaaatgattgtttctgtttggtgcccatggttgcggacagcaccacatggaatgcaggataggttttgtacatatgttttcacatgttcagcaacaattttacacttgtataggtgtgtttctttacatgtacagtgaaccattttgataaaattctctttgcttcggtaaatgagaatgaacgtgagagctaaatgaaaatattcattaaactgttctccagaaaaaaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="78777" stop="83953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79077" g_stop="79427" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79428" i_stop="80004" i_length="577">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80005" g_stop="80050" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="397" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80051" i_stop="80267" i_length="217">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80268" g_stop="80534" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="664" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80535" i_stop="80648" i_length="114">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80649" g_stop="80721" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="737" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80722" i_stop="81719" i_length="998">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81720" g_stop="81800" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="818" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81801" i_stop="81886" i_length="86">
            <donor d_prob="0.843" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="81887" g_stop="81950" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="819" r_stop="882" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="81951" i_stop="82510" i_length="560">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.457" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="82511" g_stop="82598" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="883" r_stop="970" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="82599" i_stop="83002" i_length="404">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.392" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="83003" g_stop="83087" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="971" r_stop="1055" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="83088" i_stop="83312" i_length="225">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="83313" g_stop="83653" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1056" r_stop="1396" r_length="341" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1397" polyA_stop="1410"/>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U322948" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1396</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79077" e_stop="79427"/>
          <exon e_start="80005" e_stop="80050"/>
          <exon e_start="80268" e_stop="80534"/>
          <exon e_start="80649" e_stop="80721"/>
          <exon e_start="81720" e_stop="81800"/>
          <exon e_start="81887" e_stop="81950"/>
          <exon e_start="82511" e_stop="82598"/>
          <exon e_start="83003" e_stop="83087"/>
          <exon e_start="83313" e_stop="83653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTCCTAATATTCCACCCACTTTCCTTTTCCTTTTTAGGTATATTCTCAACTCTTTTTCACCATTAATGGCGTTTTAGAGCATCACAAACCCCAAAAAAGTAGTGGAATTTGTTGTTGTCATAAAGGAGAATACTACTTATAGCTTTTTAGAAGTAATGGGTAGTGAAAATCAACAGCAATTTGAAGAGAATCTTCTTCATAATCATAATCATCAGGAGCAGCAGCAGCAGCAGAGGAAGAACCGTTCTTTAAGGAGTAAAGCTGCGCACTTTGTATCGGATGTTGCTACTGTTATTCTTAACCCCATATCTGATAAACCCTTAAAGCCCAGACCACCACCTTTGCCTGTAAGTTTTGGGGGTTCTTGATAATTGAAATGATATATGTATATGTTTTGTATTCTAAATGAAATTTTGATCTTGTTGGGGTTTGTAGTATGATCTTTTGATGATAATTTCAGCTCTTGAACACCCAATTTGGAATTGATCAGAAATGAGGGTTTAGGTTGACTATTATAGTGTAGCCTATGAGCATATAATCTGTGATCTTTAGCTGAACTTGGTAAGTTGTCAATTTTTGTCTAACCTAGTTTCTAGCTAGGCCTCCCAACTTTGTATGTTTTTGTTGATTTTCGAGGGAGTCAAGTCATGTCAAATCCTAGCTTGCTTGTCTCCCTTGATTTTTCCACAATAAGGTAATTGTTGGGTCGTCTAGTCTTGGAGGAAGAACAAGATATGAATAGGATTGCAGCATCATAATCACTTCTTAGTATTCACTGCCCTTTTTACTGAAGATGCAGTGTGGATAACATCCTTTAATATTGGGGCATTTGATATACATTATACTCTGAAAGCAAAGCAGAAGAGAGGTTCTGTTATATTCCCTACAGATTGTATGTTAATAGTTTTTCTTATATTTCTTTAGGAAGATGGATCTGATTCTGACGGAAGTAAGCATGAGTCAAATGCAGAGGGAGATGCCACTGATTTAGTTGACGGTCCTGATACATCTTCTTTCTCAGCGTTCCTATATTCACTGTTGTCGACCACAGGATCCGAGAGTAAGCCTAACACTATTGGAAAATATGATAAGCAAGATGATCGTGATGAGTCAATACCTGAACTTACAATGAGGGAACCTAGCAGAAGAAAAGGTATACTTTCCAGGGGTAAACATTCCCTCGGCAGAGCTCTTCACCAAGTTGCTAGACTAGGCGGCTTTAGGAATCAGGGTTCGGCAAAGGGCAGCTCTGATATGGTGTTTGATGATGGAAGTAATTCTAAAGTTTCCGGAGATAATCAAATACCTTTGGAAGATATGAATAAGAAACCTCTTCTGAACAATCTTCCGGGAACTTCTGAGCCTTCAGTTCTCCTCACTGAGAAGGCACGAATTTCTCTTTATGCTGCACTGCCTGTGCTTGTGCAGGACAGGAAGTGGGTCTTGTTATACAGGCAGGGATCCTGAGTTGTATTAAATTTGAATGCTCTCTGAGCAGCTCTATGCTTATTTTCTCTCCTATTTCCAATTTTATAGTGGATTCTAACTTCTCAATTCTATTTTGCCAGTACATGGAAGAATGGAATATCACTCTCGACTTTATACAGGAGAAGCCTACTCTGGCCTGGCATCAGTCTGCTGGTAATTAACTGAAGACTTGTAAAGAGATATGCATTGCTCATTAAGAATTATGTAACAGGAGTTCCACATTGAAGAGCTGTTTTAATTTACATTTTGAACAATTCTTTGATTGCTTATGGTCTAGATGAATAAGAACTATTATTTTGTTTTCTGTATGTGTGTGTATATCACTTCCTGAAGTAACCACCAGATAATCTCCTTCACTTTTATCAGTATCTGTTGAACTTAAAAAAGAGTAGAATCCCTGTGCTTTCTTGTATGTGGAATAAGATCCAGCTGTTTTAATATATGTTCAAATACTCCAGAGTTTTGCTATCTTTTGATGCCCTAACTTATTAGTGTTGCTGTTGCAGTCCAAATCATATTTTCAGAAACCGAGTATAGGTCAGCTATATAATATACCTCTTACTAAAAAGACAATTTGTCATCGTTTCATAACAGATCTAACCAATGCTTCTCTTGGATGATAAACTCATTGTATAGTAATTTGTTCCTTCTGATATTTCTGGAACTAAGTTTTCTGGGTTTGGTATTTCCTTTCTGCCCTTGTTTTTGATATGCGTTTTTTGAACCGAGTGTCTATGGAAACAGCCTTTCTATCTTCACAAGGTAGGGGCAAGGCTGCATACAATGTACCCACCACCCTCCCCACACTAGGTATGTTGTTGTCGTAAGATTCCTGGCTTCGTTATGATTTGAGAAAGTAAATGATAGATCTTGAGATGGAAATGCCTCTGAAATTTGATGCGAGGCATTGATAAAGTCAAAGTATTGTCACTTTCGATTTTGATTTCTTGCTGGTTGCTCTTTTTGTATGAGTCCAAGTGCTCTATCTCTATGCATTATTGAAGTTAAAAGCATTGGTGTCGGTGTCTGGTGTCTTTTGATTTTCTATCAATGTGAGTGGTGGACAGTCATTAAGACTTAGAGACTTACAGATTATTTGATCTGGCATAAGACTCTAGTTTTGTTTCTCTCATATTGTCCAAATCTTATAGGTTGTGGGGGACCATAATGGTGCTGTGTTTGGTGGGCTAGTTGATGCACCTTTAAAGCCAACAACAAAGAGAAGATATCAGGTAATTCTGAGCAGAATACTTAAAACATGTCACCTCTGCCTTTGAGTTTCCATTTGTCATCTTGATTTGATTTTGGTATTTAACAGGGTACAAACAATTCATTTGTTTTCTCAAATGTATCTGGCCAACCTGTCATATTTCGTCCCACAGGTATCTCTCTTTTCCTTGTACTTGAACCAGACATTTAAAGTTTGTAGAACAAATTTCCGTTCTTTGTTTTGTCTGCTGTCGCTAACAAATTTATTTTTTAATACATGGGGACGGGAGTGGTCTGGTTCAGCATGTCCATATCCTCTTCTATTTGTGGTATTGATGGTCAGGAAGAGAATTAAAACAGTGGTCCTCTTATGGGAAATCTTGGGTTCGAAACATTTTTAATACGTTGTTTACCTGATTTACTGTCATCTTACGATGATGAAAATTTTAGCTGGTGATAGTAGTATAACCATACAAACTTTGAAAAATAGATTTCGTGGTGGATACCAAAGATATAATGATCAAGAATTTATTGTTTTCCAGAAATTAGTCATTTATTCTCTCTGAAATCACTATTATCCCATTTCCAGCATGATTGTTGACTGTTTCTGCTTCTGACTTTGATTTTTCGGTTCCTTTTGCCTTTTATGATAATGTTTGTCCATAAGCCTTGGAACTGTTTGGAACTCAAATCAATTACTTGTGACATGACATTGACGCTGTCGCCTATGTAGGTGTCAATCGCTATTTTACTGTCTGTTCCACGGAGTATTTAGCTTTGGGAGGCGGTGGCCATTTTGCTCTCTACTTAGACGGGGATCTGTAAGATTTCTTTCCCCTTCATTATGATCCTTTTGTCATTGCTTTATATGTGTATGCTTTTTGACTGCTTCCTTCCTAGTATCATAATGTCCTCCAATAAAAGGAGAAATAAGAGGAAAATCAAATGCCACACACCGCCTTGGGAGTTACCTTTTTCCTGTCCCATTTTTGGTTGCCATGACAGGATTTTAAAAAAATCTTCTTAATCTCAAGTTCACAGCTATCATCATCGTCATCATGAATATCACCTTTTAATATATTTTCTGTAGAATCAGATCTTATGATTCCAATTTATTGCCTCTATTGCCCATAGATTAAAAAACAAGGGGAAATCAAATTCTATTGAGTATGTTAAAGATATCTTTGACTCGGATAAATTAGCTCAACAAACTTCACTTTTCCAGGCTAACAGGTTCAAGTGCAACATCAGAAACTTATGGAAATTCTTGTTTGGCACATACTGAAGACTTTGAAGTTAAGGAAGTTGAGGTAGTCTCGTAACTGCATCTCTGTATGTGTTCGCACGCATGCACATTTTGTGTTCTGCCTTGTCTGTCTCTTCACTATCTCTATATGTTATAGTTACATGTGTGTATCTGTCAGGGCAGTTTGTTTGAAATTAGCTCTATGAAATTTACCTTTCAAGAGTACAATATGCATTTAACATGAGAAATTAATTTTTAATGTGATATCCATTTATCATATCATATGCAGTTATGGGGCTTTGTATATGCTTCCAAGTATGAAGAGATGGTTTCGATTTTGCGAACAGAGACACCTGGAATTTGCCGCTGGTAAACACAGTGTTAAAGATGCTTGCTTTCCAGTCTAAATGATTGTTTCTGTTTGGTGCCCATGGTTGCGGACAGCACCACATGGAATGCAGGATAGGTTTTGTACATATGTTTTCACATGTTCAGCAACAATTTTACACTTGTATAGGTGTGTTTCTTTACATGTACAGTGAACCATTTTGATAAAATTCTCTTTGCTTCGGTAAATGAGAATGAACGTGAGAGCTAAATGAAAATATTCATTAAACTGTTCTCCAGAAA</genome_strand>
        <mrna_strand>CTTTCTCCTAATATTCCACCCACTTTCCTTTTCCTTTTTAGGTATATTCTCAACTCTTTTTCACCATTAATGGCGTTTTAGAGCATCACAAACCCCAAAAAAGTAGTGGAATTTGTTGTTGTCATAAAGGAGAATACTACTTATAGCTTTTTAGAAGTAATGGGTAGTGAAAATCAACAGCAATTTGAAGAGAATCTTCTTCATAATCATAATCATCAGGAGCAGCAGCAGCAGCAGAGGAAGAACCGTTCTTTAAGGAGTAAAGCTGCGCACTTTGTATCGGATGTTGCTACTGTTATTCTTAACCCCATATCTGATAAACCCTTAAAGCCCAGACCACCACCTTTGCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGGATCTGATTCTGACGGAAGTAAGCATGAGTCAAATGCAG.........................................................................................................................................................................................................................AGCTCTTCACCAAGTTGCTAGACTAGGCGGCTTTAGGAATCAGGGTTCGGCAAAGGGCAGCTCTGATATGGTGTTTGATGATGGAAGTAATTCTAAAGTTTCCGGAGATAATCAAATACCTTTGGAAGATATGAATAAGAAACCTCTTCTGAACAATCTTCCGGGAACTTCTGAGCCTTCAGTTCTCCTCACTGAGAAGGCACGAATTTCTCTTTATGCTGCACTGCCTGTGCTTGTGCAGGACAGGAAGTGGGTCTTGTTATACAG..................................................................................................................TACATGGAAGAATGGAATATCACTCTCGACTTTATACAGGAGAAGCCTACTCTGGCCTGGCATCAGTCTGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGGGGACCATAATGGTGCTGTGTTTGGTGGGCTAGTTGATGCACCTTTAAAGCCAACAACAAAGAGAAGATATCAG......................................................................................GGTACAAACAATTCATTTGTTTTCTCAAATGTATCTGGCCAACCTGTCATATTTCGTCCCACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCAATCGCTATTTTACTGTCTGTTCCACGGAGTATTTAGCTTTGGGAGGCGGTGGCCATTTTGCTCTCTACTTAGACGGGGATCT....................................................................................................................................................................................................................................................................................................................................................................................................................GCTAACAGGTTCAAGTGCAACATCAGAAACTTATGGAAATTCTTGTTTGGCACATACTGAAGACTTTGAAGTTAAGGAAGTTGAG.................................................................................................................................................................................................................................TTATGGGGCTTTGTATATGCTTCCAAGTATGAAGAGATGGTTTCGATTTTGCGAACAGAGACACCTGGAATTTGCCGCTGGTAAACACAGTGTTAAAGATGCTTGCTTTCCAGTCTAAATGATTGTTTCTGTTTGGTGCCCATGGTTGCGGACAGCACCACATGGAATGCAGGATAGGTTTTGTACATATGTTTTCACATGTTCAGCAACAATTTTACACTTGTATAGGTGTGTTTCTTTACATGTACAGTGAACCATTTTGATAAAATTCTCTTTGCTTCGGTAAATGAGAATGAACGTGAGAGCTAAATGAAAATATTCATTAAACTGTTCTCCAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="99446" stop="100704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99746" g_stop="100404" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99746" e_stop="100404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATCGTTACCTTATTTAGTTGTCTGTAATCTATGCACATCCTAAAACTTCCACCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGCAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCTATTGTATAAGGGGGTATAGAAATGGGGCCAATACCCGGTTCAAGATCAATGTAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCATGGACTACCGAAACTGACTCAATTGACGGTACTTGGGTAGTGTCATCCCTGAGGTGTGCCAAGAAAGCTAAACAACCCTTACTAACCATTCTCTTAGCACGAAGAAAGGAGATGATACGAACCGGGTTGGAAGTGTAGTTACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335938" ref_strand="-" ref_description="SGN-U335938        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-59, score=231)">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="-" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="101538" stop="99534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101238" g_stop="101065" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.891"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101064" i_stop="100326" i_length="739">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100325" g_stop="99798" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="-" ref_id="SGN-U335938" ref_strand="-">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335938" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="101238" e_stop="101065"/>
          <exon e_start="100325" e_stop="99798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAAGATGTCGGTTACTGCATATGAGGCTAAGTTTCGTGAACTTTCCAGATATGCCACTCAGCTTTGTTTCAGTCCATAAGAGCGGATTTGCCGTTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTTTAGCCTTATAGGTAGCGACTACGGCAAAATCCTTTCAAGAAGTGGTGGACTTCGTGATAGAGGTGGAAGGAGTGAAGCCAGATGACTTCACCATGGCATCGACATCAAAAAGTTTTCGAAGGGGAGGTGAGTTTAATGGTTCTTACTCTAGAGGACAGGGTTCAGGAGGTTACTCAGTCCGACCAATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTTAGACCGGTCAACACTTCTCTGAGAGACCTATGCTTAAATCCAGAGAGTGTTATGGATGTGGGGAGACTGGACACATTAAGAGGTATTGTCCAAAACAGAGTTACAGACCTCCAATAGTTAGAGGTAGAGGTGGTCATAGAAGAGGTCGTTATCCTGGAGAACGTGGTGGCCGAGGTAATGATGGTCACCAAACCAACCGGGGTGGCGGGCAAACTGGCTGCGGTGCAGCATGGTTGGGGTAACGGGCAAACAGGTGATAGGGCCCATTGTTACGCCTTCCCTGGGCGGTCTGAAGCGGAGACATCTGATGTTGTTATCACAGGTAATCTTTTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAAGTATATAGGTCTGGTCTGGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTAACTACACTTCCAACCCGGTTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGCACACCTCAGGGATGACACTACCCAAGTACCGTCAATTGAGTCAGTTTCGGTAGTCCATGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTACATTGATCTTGAACCGGGTATTGGCCCCATTTCTATACCCCCTTATACAATAGCTCCCGCGGAGTTAAGAGAGTTAAAGGCCCAACTGCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCCCCTTGGGGTGCTCCGGTTTTGTTTGTGAAGAAGAAGGGTGGAAGTTTTAGGATGTGCATAGATTACA</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGA-TTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317065" ref_strand="+" ref_description="SGN-U317065        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-84, score=314)">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="99518" stop="100872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99815" g_stop="100572" g_length="758"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U317065" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99815" e_stop="100572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAACTTCCACCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGCAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCTATTGTATAAGGGGGTATAGAAATGGGGCCAATACCCGGTTCAAGATCAATGTAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCATGGACTACCGAAACTGACTCAATTGACGGTACTTGGGTAGTGTCATCCCTGAGGTGTGCCAAGAAAGCTAAACAACCCTTACTAACCATTCTCTTAGCACGAAGAAAGGAGATGATACGAACCGGGTTGGAAGTGTAGTTACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATAACAACATC</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCAC-AATCGAAAGATTACCTGTGATGACAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335936" ref_strand="+" ref_description="SGN-U335936        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-62, score=215)">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="-" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="100818" stop="99558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100518" g_stop="99858" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="-" ref_id="SGN-U335936" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100518" e_stop="99858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAAGTATATAGGTCTGGTCTGGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTAACTACACTTCCAACCCGGTTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGCACACCTCAGGGATGACACTACCCAAGTACCGTCAATTGAGTCAGTTTCGGTAGTCCATGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTACATTGATCTTGAACCGGGTATTGGCCCCATTTCTATACCCCCTTATACAATAGCTCCCGCGGAGTTAAGAGAGTTAAAGGCCCAACTGCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTG-TTCTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGT-GGGAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335937" ref_strand="+" ref_description="SGN-U335937        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="+" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="99918" stop="100848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100218" g_stop="100548" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="+" ref_id="SGN-U335937" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100218" e_stop="100548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335931" ref_strand="+" ref_description="SGN-U335931        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-33, score=146)">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="-" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="102165" stop="101012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101865" g_stop="101312" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="-" ref_id="SGN-U335931" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101865" e_stop="101312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGAAAGGGAAAATGAGCAAGTACAGAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTTGCTTATCTTAGCGGGCTATCTGATCAAGGCCAGACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGACTACTGTGGCTCCCTGCATGGATGCCTCATTGTAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCATACGATTTTCTGGTTGAGTTTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCGCATGTGGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335073" ref_strand="+" ref_description="SGN-U335073        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="-" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="102524" stop="101639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102224" g_stop="101939" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="-" ref_id="SGN-U335073" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102224" e_stop="101939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCTTTCTTTCTTTTGTGTTATTACTTGGATCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACCGCGCCAACATCAACATCAGCAAGACAAGATGCATCTGAGCCAGCCACTGAGACTGTAG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325575" ref_strand="+" ref_description="SGN-U325575        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | asparagine synthetase 2 (ASN2), identical to asparagine synthetase (ASN2) (Arabidopsis thaliana) GI:3859536 | chr5:25986416-25989801 FORWARD | Aliases: MXK3.25, MXK3_25(evalue: 0, score=1004) genbank/nr: gi|22208544|gb|AAM94340.1| asparagine synthetase 2 [Striga hermonthica](evalue: 0, score=1011)">
      <seq>ggtaaccagtaaccgcaatcactttttcttcatttcagaagaagcgagaaaaaaaaattgcggacaatgtgtggaatacttgcaattttcggttgcactgataattctcatgccaagcgttcaagagtaatcgaactatcaagaaggttgcgccatagaggacctgactggagtggactgcatagccatgaggactgttaccttgctcatcaacgattggcaatagtagacccaacttcaggagatcaaccgttgtataatgaggacaagaccattgttgttgcggtaaatggagagatctacaaccataaggaattacgggagaaactgaagtcccatcagtttcgaactgaaagtgattgtgaagttattgcccatctttatgaagaatatggagaaaacttcgttgacatgttggatgggatgttctcttttgttcttcttgatacccgggataaaagtttcatcgctgctcgggatgccattggcattacacccctttatatggggtggggtcttgatggatccatatggttttcctcggagatgaaagccttaagtgatgattgtgaacgatttgttagcttccttcccggtcatatttattcaagcaaaaatggaggacttagaagatggtacaacccaccatggttttcggaaaccattccttctactccatatgatccccttgtcttacggaaggcttttgagaaggctgtagttaagagactcatgacggatgtaccatttggtgtgcttctctctggcggactggattcttcacttgttgctgcagtggctagccgctatttggctgatacagatgccggtcgacaatggggatcccagttgcatacgttttgcgtaggcttgaagggttctcctgatctgaaagctgccagagaggtggcagactacattggaactcgtcaccatgagtttcactttacagtgcaggaaggaattgatgccttagaggaagtcatatatcatgttgaaacatatgatgtgaccactatcagagccagtacaccaatgtttctcatgtctcggaagataaagtcattgggtgtgaaaatggttttatcaggtgaaggttctgatgaaatttttggtggttatttatatttccacaaggcacccaacaaagaggagtttcaccaagaaacttgtagaaagattaaagcacttcatctttatgattgcttgagggccaataaatctacttcagcttggggtgttgaagctcgtgtacctttcttggataaagaattcatcaatattgcaatgaacattgatccggaatggaaaatgatccgacctgacctcggaagaatagaaaagtgggttgtacgtaatgcttttgacgatgatcagaatccttatctgccaaagcatattttgtataggcagaaggaacagttcagtgatggagttggctacagttggattgatggcttgaaggatcacgcaaacagtcaagtttctgattctatgttagcgaatgcaagttttgtttaccctcataacacacccacaaccaaggaagggtactactatagaactattttcgagcgatatttccccaaggctgctgcaagagaaactgttcctggtggtccaagtgtggcctgcagcactgcaaaagcagtagaatgggatgccgcttggtccaagaatctagatccatccggtcgagctgctctcggtgttcatgaagctgcttatgaggttaaagaactatgaagttgataaagctgtagtagctgtttgattgtatatcttcattcaaaaacctgacttgttccacatttgacttcttttacgagtttgaattctttgcttctggttttacaattaccaaagtttattctacttgagaagaaatatgacgaatatgtgttatccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04HBa0077O05-0n9Gv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04HBa0077O05.2" temp_strand="-" temp_description="C04HBa0077O05.2  CU457751.8 htgs_phase:3 submitted_to_sgn_as:C04HBa0077O05 sequenced_by:sanger upload_account_name:uk">
        <position start="129372" stop="109204"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129073" g_stop="128928" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128927" i_stop="123025" i_length="5903">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123024" g_stop="122886" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="285" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="122885" i_stop="121888" i_length="998">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121887" g_stop="121792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="381" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121791" i_stop="121604" i_length="188">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121603" g_stop="121462" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="523" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="121461" i_stop="115152" i_length="6310">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115151" g_stop="115056" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="619" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115055" i_stop="114081" i_length="975">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="114080" g_stop="113986" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="714" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="113985" i_stop="113040" i_length="946">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="113039" g_stop="112878" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="876" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="112877" i_stop="112072" i_length="806">
            <donor d_prob="0.639" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="112071" g_stop="111991" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="877" r_stop="957" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="111990" i_stop="111893" i_length="98">
            <donor d_prob="0.436" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="111892" g_stop="111671" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="958" r_stop="1179" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="111670" i_stop="111555" i_length="116">
            <donor d_prob="0.467" d_score="1.00"/>
            <acceptor a_prob="0.829" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="111554" g_stop="111420" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1180" r_stop="1314" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="111419" i_stop="110682" i_length="738">
            <donor d_prob="0.888" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="110681" g_stop="110601" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1315" r_stop="1395" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="110600" i_stop="110295" i_length="306">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="110294" g_stop="110208" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1396" r_stop="1482" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="110207" i_stop="110113" i_length="95">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="110112" g_stop="110005" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1483" r_stop="1590" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="110004" i_stop="109837" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="109836" g_stop="109504" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1591" r_stop="1923" r_length="333" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04HBa0077O05.2" gen_strand="-" ref_id="SGN-U325575" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1923</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04HBa0077O05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129073" e_stop="128928"/>
          <exon e_start="123024" e_stop="122886"/>
          <exon e_start="121887" e_stop="121792"/>
          <exon e_start="121603" e_stop="121462"/>
          <exon e_start="115151" e_stop="115056"/>
          <exon e_start="114080" e_stop="113986"/>
          <exon e_start="113039" e_stop="112878"/>
          <exon e_start="112071" e_stop="111991"/>
          <exon e_start="111892" e_stop="111671"/>
          <exon e_start="111554" e_stop="111420"/>
          <exon e_start="110681" e_stop="110601"/>
          <exon e_start="110294" e_stop="110208"/>
          <exon e_start="110112" e_stop="110005"/>
          <exon e_start="109836" e_stop="109504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAACCAGTAACCGCAATCACTTTTTCTTCATTTCAGAAGAAGCGAGAAAAAAAAATTGCGGACAATGTGTGGAATACTTGCAATTTTCGGTTGCACTGATAATTCTCATGCCAAGCGTTCAAGAGTAATCGAACTATCAAGAAGGTTTATCCTTTTCTGTTATTCGATTTTTGTTATTTGATTCCCACATTGTATGTAAGTGTTTTTAGATTTGCTATTCGTTGATTTGTTCTTAGATTTGATTTTGTTATGTTTGTAACTAATTACACACAAATGTATGGTAATGAATCTGATTATCTTTGAAAATGGAAGTTGCACACTAATGCCTGGAAAAACAGCTAACTATTGATGTAGATGTTGTGCAAGACATATCCGCTGCTCCTACTTAGTTAACTGCTGGAAGAAAATTTTTTGGTGTTTTTTTTTGGATAAGGTAAATGTACAATATGGGGTTTGAACCCCATCTTGGGGTGGTAGGATATGTTTTTACTACTACTACATTATTGATGCTTGTTGTTAAAAGTTTGGTGTTTTTCAAGCACGAGAGAGATTTGAAAAGCTAAAGTACAATATAATGTAGTAATTATTTTGTGAAAGAATTTTTGGTCCTATAAAAAGCGGAATTTGTGCTTGTGGAAATTATTGAGTAATCGGAATTAACTTTTTTAGCACTTCCTGCTTTTCTGGATGTTTTTCAATACTTGAGAACTGCTAACATGTCAATTAGCAAAGGGGAAATGAACCATCTTTTCCATGTGTCTGGATTAAACATCTTATTAATAGCTATTGGAAACTTCATACTTAAAAAGAAGTGAACTTGGAGGAGCAGGGGTATAGAGGGACTTCACCATTCTTTATCTTATGCATGTCATATAATTTTTTTAAAATCTCACAAGGTACATTGTTCCAATCATGAAGAAAATTCATGTAAAGATACCATCTTAGTGGCCGAAAATTTAATACTAATGTGAAATCAGTGGTATAATTGATGCTGACTTTGCATAGTATAGGTACTCCTTTTGAGTACGATATGAGATGGGTAGACACACCATCTAACTTCATCATACTTTTTGAAGCTGTGAATTCATTGGATCTCCTTATGTGGTTCTTCTCTTGAAACACGGAGTAAAATTTTTCATTATGTTGTTGTAGCTTGATATATCTTATGATAATGTATGATGCAACAAGTGAGAGTGATTGCGGTACGAGGCCTGACTAATGGTTGTCATATCCTGCGCATCCTATGTGTGATTTAAATGCTCTACTTGTTTAAAAATTTCTAGGCTAACTTAATTAACAATTTACATTTTAAATTTACATTGTATGGGGTAAAGTGCTCTCTAGTTAAGAATGCTTATGTTCAACAGATGAATGTAGAAGAGATGAGGATGCTCAGATGAATGTGTGGGCATACGAGGAGAGATGTGATTAGGAACGATGTTATGCGAGGCAAGGTGGGAGTGGCCTCCATGGTGGACAAGATGAGAGAAGTAATATTGAGATAGTCGGGGCATGTAAAGAGGACGTGCGCTGATGTGCCAATTAGGTGTGAGAGGTTGGCTGCACCAGGAGTTAAGGAGAGGTAGGCTGAAAAAGATCTAGAAGGAGGTGATAAGACAAAACGTGGCACAACTTCAGCTTATTGAGGACATAGCCCTAGATAGGAAGTATGGACGTCGAGGATTAGGATAAAAGATTGGTAAATGGTAAGTAGTTGACAGTTGTTGCACTTTAGGTGGGAGAGGTAGGGGCTAGCCTCATCTCCTCCTCCTTAGTAGCAGTATTATTTAGTAATCGCATAGTGCTGCTAAATCAATTGGATTCTGTTGCATTTTGGTCCTTAACTACATCATCTGGAATACTCTTGATGGCACAAGATTTTTGCCAATTGTAGCCTATTTCTTTTTCTTTTTCTTTCTACTGTGGCTGGGTGCAGAAGGTTGTTCTTTGTTTTCGAGAAAAGTGGTTAATGTATTACCGATATAGCACCAAGAAGGTACTGCTGAAAGTATTTGCAACAAATTAAAATAACACCCCTTTAAGGATTTATCACAGCTTCATTATTATTTACAACAAAAATAAAACAAAAGTAAACAATTCGTTTTGATATTTTGAATAGAGTTTCCTTTGTCTTTAAAACATATTGCGTTTCTCACCCCCTAATTGTTTAACATATATATACTGGAATATTACCTGCTTATAATTGTTTTACTTGAGCCGAGGGGCTCTCAGAAACAACAACCTCTCTGCCTTCACAAGGTAAAGGTAATCTTCGTACACACCACCTTCCCTAGACCCCTTTTATAGGATTTCACTGTGTGTTTTTGCAATTGGTTATGTATTCTGGAATAGTTAGTCACCATTTCACTGACCGGAATTCCCTCCTCTAATGTTCCAGCAATTCAATAACCCACTTGTGTGCTTGGTATAATCCACTTGCACCCAACCATATTGAGAAATAACTGCCATAATACGGAAATGGAAAAAATTGGTGATTGATACTTCTCAGACATGTTCCACTTAGTAGCATTAGAGCACAACTGGATCTTCTTCTTTGATGGGTTTCGTGTGTTAAGAAAACCTCTCGAACTCTTGGGAACAAAAACACCTATATAATCAGGGAGTCAACCACAAGCAAAAGGATGGTCGCTAAGCCATATTGAGGGAGCTAATGAAATCCAAGAAGGGTGATATATCATTTACAGGGGATAAGTTGCTCCAATGGAAGAGACTAATAAGGCAAAAGGATTTCAAACTGCTAATAGGAGTTGAGATACCATCAAAACATCTGAGATTCCTTTCTTTCAAATACACCAAAAAAACATGATGGAATCATCTGCCAGGTCTTCTTGATGGGGCTATCAACTTCTCTAAGACTCCAACTTCCAACTACTTCTTTGACACTTAAAAGATTAAAGTCCTTCCAATGCTAAACCAGGAACTAGGTGGACCCTAAACCATCTATGATTGAATCAGTCTCATTGGAGTAGACATTTGTACACCAAAAACAGAACAACAAAATACATTTAAGCTTGACTTCCTGCAGGTTGTTGTCCCTATTTTAAAACATCAATCATTTCTCTCTCTCCATATAGTCCACCATATACAAGCAGGTATCATCCTCCATCTTTCTCTGTTTGTAGCCCCAACTCCAACCTCCTCCCAACTGAAAAGAGTCTCATCAACCTTACTAGGCATAGTCCAGGAAATGCCTCTGAGATTAAGGAAAATCTGGCACAGTTGATCAGTGAAATTGCAGTGTAGAAAGAGGTGTTTCACTGTCTCTGTATCCTTACAACAGAAGGAGCATCTGTTGCATAGAGATATACCTCTCTTGGCCACATTGTTCAATGTCAGAACTGCTTCATTGGCTAGCAGCCAGGTGAAGCATGCCATTATTTGTGGCACTTTGACTCTCCAAATTTGCTTCCAAGGCCATTTGAAGTCTTATAAGGAGCGTTGTTTTTCCAGATGTGTTGCCAGGATCACAGATTACCTTATTGTCCATCATAACTTGAAAGAGAATAGGAAGAGTTAACAGTGATGCTGGCCTTACTATGTAATTTCCATATCAGCTTCTTGACCATTGCCTAGCCCGTGAAAAGTCTCAAGAACCCAAAAATTTTGCAAGTCTCCCCATTCTCAATCATTCAAATATCTTCTGAAATTAAAGTTCCAACCATCAGGTTCTCCGATAGCACCCGAGCTTGAATCAGGCATCAAATGAGTTTGAAGAAATGTGGATATAGATCTTCAAAAGGAGCATGACCTATCCACTCGTTTACCCAAAAAACAATTTGCTTTCATTCCCCATTTAAACCCAATGTTGCTCACAAAGGGCTCTAATATTCTTCCATAAACCCACCCCATGAGTGGAAGTCACTGGTTTAGTAGTCCAACAGCTTCTACTTTATACTGTTCACTGATGACAGCCTTCCAAAGTGACTGCTCTTGTAAAGAGAATCTCCATAATGGCATAATCATTTGATTATCATTAATGCCTCAAGTTTGTAATGCCAAGATACCTTCCTTCTTGCTATATGTTAAAGTACTCCACTTGACCAAGTGAAAAAATCTTTTTTTACTGTTTCTCTGTCAATGGAAATCTCTTTTAACATATTACATATCCAATACTTCTCCACTTTAACATATATTGGGAATAAGGATATAACATACGTGGGGAGTGACCTAGTACACTGTTAGGCGATACTAATTACCCTAAATGTATTGACTTTTCCATCTTCCAACCTCTTCTGACTTTTTACAAGTACCCCTTGTCAAATCTTGGAAGATATATGATTAGCTTCCGAGTTCAAATAAGTAGAAGGAAGAGTTTCCACATCACAACCCAAAACATCAACATTTGTCACTTGACTGAAAATAGCAAGGCCTCCTCTGATTGATTGATATGCAGTCCAAACACTGAATCACAAAAAGTGAGTACCAATGGTGGTGTTCAAGCATTCTATTGAAGAATCATACATCACAAGAGTATCATGATCTTATAGAAAACAGATCAGGGCCAAATACACCCATGTACTATCAAAAATAGTTTAAATATACCCCTCGTTTGAGTTTCGGTGCAAATATACCCCGCCCGTTATATTTACGGTCCAAATATGTCCCTCCCGTTATACTTACAGTCCAAATATACCACTCCTGTTATACTTAAGATCCAAATATACCCCTCACATTAAACTTTTACAGTGATTTACCCTTATTTTTAAGGGATGAGCACGTGGCGAGCTTAGAAACAAATAACACATCCCCAATTTTAAATACCTGGTTCACTTTACGAAACTATGGGTTTAACCATCCCGACCCATTCACTTTCCAGCAATTGAACCTGTCCAAAGAGTCTACTACTTACTGTTCAGAAATGCTATGTGGAAATCGCCAGGCAGGTTAATGATAAACTTGCGAAAATAGATCTTTATTTTCTGAAGCTTGCAGATGCCATGATCACTTGGCTTGGGATGAGATTAGTCCTGCTACTAAAGACTCTGCCTAAGTTCCCAATGCTACTTCAAACAAAATATCTCATAGTTATTTGTGCCTTATGTGTATTTGCAGTATTTTTTACCTTTGGGTTTATATGATTCTGTCATCTGTGTACTTTTACATATTTTTTTTCAACTTTGAGTTGTCTTCTTTTCATCTGACCCCACGTTATACCTAGAGATCTCCCAAAAGTCTTTAGTTTCTGTTTTCCTGAGCCTAAAATTATCCTTTTTCCCATAGTTGCGTCTGTACTGTTTTGCAGTGTTGGCCATTTTCATTGCAGTATTAATGTTTTGTTTGCTGTGCAATTTCTAGTTTCTTCTGAACAGCTATTTTCTTGCTTCTGTTTTCATCATCATCAGTCGCCACTTCTCCATTTGATTCTTCATCTAAAAAGCATTGTACCCCTCTTCTTATTCCCCTCTATTTAATATCAGTTGCTATTATCTTGTTTGATAAGTCATGCACCCAGTTGATGCTGCCTATTTAGTTTCTTTTCCCGGGGACATCTTTTCCTTCCTGTAAACCACAATTTCTTTCCTGAAGAAATTTTTAGAATTGGTTCTGGCTAATTCTGTTCTGTCCAAGAAAAGAAGGGGAAATCTCCCAGCATTCAGTTTTTGGCCTTACCAGCTTCTTTTCCAACTTACTGGCCACATGTTCTTTCCCTTTTAAGAATTGCTGACCATTATCTCCTATTATCTCTGTGGTTTTCCGTTAAAAGTAACTGCTTGTCAGGACATGCTTCGTGCACAGAGCTGTTGCCTTTTGGGTGGGGACATGCTTTGTGCCCGTGGTGCTAATACTGTCCCACAGCGTCTTTAGTATCACATTTTCAACTCCCAATTCTAATTCTATAAGTTGCCTATCTTTGCCTCTTTTAATTGATCTTGTGTTGGGCTCTGAATCTAATTCTCTGGGCTTTGCTTTAGATTATGATAAGCAGTAATCATTATTACTACTGTCTCATATTCTACGTAGCAGTAGACATGATTCTTATTACATGAAATCTTCCTAATTTTTCTTTTATATGATGTTAATTGTAGGTTGCGCCATAGAGGACCTGACTGGAGTGGACTGCATAGCCATGAGGACTGTTACCTTGCTCATCAACGATTGGCAATAGTAGACCCAACTTCAGGAGATCAACCGTTGTATAATGAGGACAAGACCATTGTTGTTGCGGTAGGAAAATATTTACTATATACTTATATACTTCAATACCACAACAGTAAATGGTCTGTGGACAGTTTGTCTTTTGATTTTCTATAGTACAAGCTTTTCTTGTAGGGTAAAGTTTCTCTACTTTACAGTGAACACAGGAACTTAGAAATAAAGGATTTGTGAAGAAACTTTTGGTTCTTCACTTTAGCGGATTATGTGGTGCACAATGGCAGTCAATTAAACATCAGTTAAGAACAATTCTAGGAGCTTTGAACTCAAAGAACTGAGAGACTAATTCAGGGCTTGGAGCCGAGATATATTAGAAGAAGGAGAAATGTATTATCTCAACTGTAATCCTTTACATGGTATATATGGATATATTCCATAACTAAAATCAACTGCTACTTACAATTCCCAACTGAATGTTATAACAGAATTGTAACTAACTAATGAACCCCAACTTACTATTGGACATCGTCCACTAATTATCTTGTCAGATTTGTAGACTTGCATCAATATGTGATAAGTAACCAGGCGATTGACTAGATGAACATAGAGAGTCTACCGTTATTTGTATTTACTCTCAGTTTATTGAAAGATCTGTGGGTCACATAGTAGTACAACTTTTCTACGCAACGTAAGTCAAATGTTGATGGTTTGATCTTTGTAGATCCAATGATATCATTTGGGTTTGGATAAAGGAATGATATATATGATTTCATTTTTTGGGTTGAAATTCAAAAGATAAATGTGTAGCCAAAAAAACTTACAGAACATACAATTCTGTCATTTGTTGTGACCATATGATAAAGTGCAATGGTGGTATGAGTATTACTATGACACTGATGCGTTCTTTTTATTTTTGATGTTCTAGATAAGCTTCTCTTGTCAAATAGCTAAAAGCTATTATTCACACATTTCAGGAGCCTTCTTTGCTGGGCTACTGTGACCTTCTCCCATAGCTTGATTTTGATAAATGTTTCTTCCATAAGATTGATATCTGCTCCTTTCGGTTTTAGGTAAATGGAGAGATCTACAACCATAAGGAATTACGGGAGAAACTGAAGTCCCATCAGTTTCGAACTGAAAGTGATTGTGAAGTTATTGCCCATCTTGTAAGTACTTCAAGAATGTATTTAGTGGAATGTACTGACTTCTCAGTTTTTGCTGGTAGAACGATTTCAAAACACCAGCACTCAAAGTTTTCATCAATAGAGAAAAAATGAATTCTAGTAAGAAAATAAGGTTTCCTGCCATAATTTCTTTCTTATTGTGTATGTACTGTGGGATATACCTCTGGCAGTATGAAGAATATGGAGAAAACTTCGTTGACATGTTGGATGGGATGTTCTCTTTTGTTCTTCTTGATACCCGGGATAAAAGTTTCATCGCTGCTCGGGATGCCATTGGCATTACACCCCTTTATATGGGGTGGGGTCTTGATGGTATGTTGCTTTTTAGTATAATTATTTTTTGGCATATTACCCTTATGATAAACGTTATGTGAACTCCCTTTGTTGTTTACTTGTGATTTTACCTGCTATAATTCTGATAGATACTGTCTCACAAGCAAATGATGTATAATAGGACCCTATCATATATGTAGTTCAGTAGTTCTTGGTGATCAACACCGTAACAAGAACATCTAAATTTGCTAGTATAACTCAAGCTTCAGCTAGTCTATTACTCCAGCGAACAACACATACATCATTCACAGTAACATTTACTTAAGCCTAGCTATACAATGATGTGAGGTACGACTAATAAAATCCGCCCATCATTTATAAGAGAAATGGCTAGCTAGATATTGTTTGTTTTTGAAGTCTTATAAGAAGACAACAGTGTTGCCGGCTTAATTACTTGATGGGAAATTTTAGTGACATAAATCTGGTTTAGGGACATGTTTGATTTGGAGAAACATAGAAGAGAAAAATTGATTAAGATATGTCAATTCAAAGGGATCAATAGGTGTGGTATTCGATTTAGAAACTATAGGCTAAGAAGTTTTTTTTGGCTGAAGTTTTTGAGCTTGGGAGACACCTTATTCCTTTTCCAATTGTCACATAGCTGAAAACAGATTGTATTCTTTAAGGGCAGTGCTATAGATGAAAAAGGGCTGCCTACTCATTGATTGTTGCACATTCAGGACGGGTTATCTAAAGCTGAGGGGTAAGAAAAGGATTTGAGTGGTGAGTACGATAGGTTTCTTGGCCATCCATGTTGCCATGGACTTGTTTCTTGAATTGTGATATTTGTAGTGGATTCTTGAACGTGATTTTCAACTTGATCCAACGTGCTAATAGTGCACAAGCCTCTCTCAGCATCAACACTTCTCGTCTACACCATAGCATGCCAGCCTTGGGTATAGCACAATGGTGTTGATCTTGGCTTTGTCATCCCTCGTCTTTCCAGGGTAGAGATAGTTCTCCAAGTGTCAAAAAAGTTCTCTACTTTGTGCATCACAAGCCCTTTTGAACATTGGTGGCTTGGGAGCCTCGATCTTAGTCCCACTCTTCACTATAGCGTATTTGGCTGTCCCAGTCGCCAACACGATCTGCTCTTCGAGTGCCTCCATCTTTGCCTTCATGGCATTGATCCATGAGTTTGCACTCTAAGGTAGCAAAGGTCTGCATCATCTTGGTCTTTATACGCCCATCCAAGTCATCTCGAATCCTCTCGATGTTTTCAAGAGTATGCCCTACCTACAATGTTTGTTTTGATTGTTACTTAAAACGTATTGTACTATATTGCTAAATTTCGTTGTTATGTAACAATGAGAACCCCTATTTAATGGAACAACCGATTTGATGTGTTCCCATTGTTACTTAATTTCTTTGTTCAATTATATCTTAACATAATATTTCAAAATACTATTTTACCTTTTACCTTAATTATTTAAATCTAGTAAAACCGCCTACCCTAGAATAATTAAGGATTTAAGTAAATTTATAAATTACAATACAGTGCGATACAATCAAACTAAACAATTAAAATGTTACTAAACAAAAAAAAACAATACAATCTAGCCAAACATTGTATCTACCATACAATACAGTACAATAGAGTACGATACAATACAATACATTATTAAACAATGGGTAACACTGATCTAAACAAAGTGTTAGAGTGTCTTCTATCTTCCCTAAGCATTGGCCAAATATCTCAACTGCGTCTATCCCTGCATTAACCTTTGTAACCCACTCCTTATTGAGCGTGGCCTCCTTGGATAGGACCTCCACATCATCCCGCTCACCAGTTCTTGGGATGTAAGCCCTTTATTCAACTCTACCTCGAGTGGCACCTCTTGGTTTATGTTGGCAACATTCCTCCTTTTGTTATTACCTTTCGTGTCATCGGAATCTTGGGTGACATTGCATGGGGTTGGGTGTTAGCAACATTGATTTTTTCGTTGTTCGCCATTCCCTTAGTTGGAACCTAGCTTTGATTCTACACTGTCACGTCCTTAGTCTTCAACTAAGCACACATGCGACACTTGACAACTTGCTCACAATGTTGCTATGCCAAGTCAGTCTAAGAAGCTAGGAATAGCTAAGAGAGTGGTAGAGAGAACACAAGAGAATTGCAAGTGGGAATTGTATTGTAGGAAACTTGATTGATTTTTGCTTGATGATTTTACTAATGAAATATCCCTCTATTTATACTACTCATTTAGGGCTTATATGCAATTAATAATTACCACACAAGTCCTTTCATAGTTACAAGTATGTCACCTTCACTAGAACTTTCTACATGCCTAGAATATTCTAAGGCCTTTCTAGAATTCTTCCTTGATATTCCATAAGAATCTTGAGCCTTTCCAAGAGACTCCCCATGGTTCTAGAATCTTCTCACAAATGCTAGCATCTTTCTTATGTAAGATACCACATGGCAAAAAAGTTGTGCCAAGGTGTGCTTGTATGGTAGGTAATCACATTTAACTGTAATAACAGACACAAATGTACCATATTTATTGTACTTCAAGAAGAGCAATAAATGAGGGTAGTTAAATTTCTGCATCTCCAAATTTTGAAAGATTTCCTTTTGAATTCTGATGCTTCTTTGAGTCTTCTGCAGAGCTACACTAGAGAAACTCTACTCATTTTATTCTTGTCATGTATAACCTCACACGCTCCGCCCATTCAAACCAAGAATCTGAGGCTAGGTTAGTATCAGTCAAGTCATAGGACTTTCCCCTAATCTGAAAAAGATTTTGTTCTCCATCCTTTCCACAGGGAGAGAGAGAGAATTTTTTTTTGAGAAAGGTAACTTGTATTATAAACAAAAGAATACACAAGGATTCAACAATGTTAGAGGGATTTTGAGCTTGTTTGAGTGGCTATCAGAAATAGAAAGGCTCAAAGGATGATCTTAGATGCTTCTATAAAAACGAACAAGTTTGAAGAAGAAAGACTGCAATGGTTTCGAGGAGAGAGTCGTTTTCAGAGATTTTGGGCGATGTTGGGAGGGTTTTGAGGAAAGAAAAAATGAACGGGTCATGTTGGAAAAAGGTTTTGGACGTCGGGTGAAAAGGTCGGAGGAGAGAGAATGACGAAAAAGAGAAGATTAGTGCTTACCTTGAAGCTCATTCCTGGGCTTATCTTTTAATTTTCAAAGTAAAAAAGAGAAATAAATTCTAGTTGTTTCAAGTGTAAAAACTGTTAAGAATATAATTATGTAAATGATACTATGCTCTCTCTTACAACTTAAACATTTAGATGAGATGATCACTCTTCAACTGTTCAACATGGTATCAAAGCAAGCAGAAGTCCTGGGTTTGATTCTCACTGCCACTCGTTGTCTCGTTTGGACAATGAAAAGAATCAGGTCTTCACATGATTGTTGAGAATATAATTAGCTTCATATAAGTGTGCTCTTTCTAATAGCTTAAGTTTTTAGATGAAATGAAACTATTTTTAATAATGGTTACATTTCAAAGTTAGAGCTGGTAAAGGAAAACATAATACGTTTTCTAGGATATCAAAATATGAAATCCCCTACAACAAAACTTATAGGCATTCTATGATATCAGTATGGAGTCACTATCATTTACAGGACTTCATTTACACCAAAAAAGAAAAAGCTAAATTTTCATTTATCTGGATAGAGTTCCTTTTGTCCTCAAAACACATGAAGTTCCTTTCCTTCCAGACTGTCCACCATATGCATGCTGGAATCATTTCTTTTGACTAACACCACCAACTACTCCACCCCAAGAATCTCAAAAGGTCAACTGATACCTTTGGCATAATCCAATTCATCTTAACAATACTCAGGAACACGTGCCATAATTGAGAAGTAATAACACTGTACTGTAGGAATAAATGTGTATTATCTTCAGCCTCCCTTTCACATAGACAGCACCTGGAACTCAGCCGGTAACCCCTCCTTAAATTTTCATGAGTCAAACGGACTTGTCTGGCCTCTAGCCATACAAAACATAGCACCTTAGAAGGTGCATTCATCTTACAGATCTGTTTCTAGGGTCATCTTCTGTCATCCTGTCTATTGCCCATCAGAATCTTGTAGGCTGATTTAACTGTTAACATCCTCACACTTGACCCTTTCCATACCAAGGAATCTTCATAATCTGTGAAGCCTTGCACCTGATACAGTTGACTTTAATGATTCAGCAACTCTATCCACTTCTTAACCATTTAGTAATCTTCTAAAACTCAAATTCCAGCTTTGATGCCCATTACAGATGAAATGATCACACTCTTCAACACCATCAAATGCACAAGAGCTGAAAAACAATTGCTTGTATATGATGGTTTTATGGTGCAAATTTCATGATGTACACGACATTCACAGAATGAGAGATTTCATTGCACTCTGCAGAAGGACCTAGAGACCACGATAATCCCCTTCTTTTGTTTTTGTGTAGGGATATCTCATTTTTGTACAGTCCAATCACCTTCTTGGTGTTTGGATTTACTCCATTTGTATATCTTTAGCTTACCGATAAAAGAAATAATAGAAAAGAGGCTGGAAAGTTCTTCTTCTGACATGCCAAGGGTTCTCAACCATTTTACAGTTAGCGAGACAAGTGAAAATAATGAAAAATACAAATCAAAAGGGTTATCTAGTTGACAACATGAGAACCCCATCAGTTTTTTTAGCTCAAAAGATTTTCCATTCTTGCTGATAAAGGTAGAAGAACAATCTCCTACTCAATCAAAGGAGGTTCTCTCAATAGAGTTAGAGGTATCAACAGAACCAAACAGGAGCTGGTATATATGGATCAGGTTTTGATGAAGGGAGAGCTGTGTTTGGGGAACACCAGGAGCTCAAGTACTTCTGCTTAGTTCATAGACATTTTATGTGATGGATATGACGGAAATATATTTGAGTGACAAGAATAGACCAGGACTAGAGGGATAGCATAACAGGTTTGGGAAGGCAAGGCTTGGAAACAAAGGGATAAAGGTGTTGGAATAGAAGGTTTTGATATCATTTTTAGCTTATGAGCAAATTATGGGGTAGTAGTGGAGTCAGAGGGGAAAGAGATCTACCAATAGCACATCCTGTATATGCAGTTAGAAACACTACCTAGAAATGCTGGAGGGACTACTACACGATCATGATAAGCATGTAAGGGTGTGTGGCAGTTCCAATTGGATTGTGGATTCATGGGCTATGCTGGAATGAAACTTTCTTGCCTAGCTTCGACATCAGCTTAACTGAGCACCTTAGGAAGACAGAAACGTAGGACAGATTTAATAGTGATGATATTTTCTGCTTACAAATGTTGTTGATAAGGGAAAACCATAAATTGCACAGAAATAACTCTCGTAAACCTGAATGCTTTTAAAAATACTTTACAATGTATATGACTATATGTGGTACATCTATCTGGTGAGAGACACTAGTACATTCCATCTATATATGTGCTCAGCCCATGTATGCATTGGACTACAATTTGTATTTATATGGATTGCAAAAGCCCAGCTGGTTCTGAGCCGCTTCTGAATGCCTTAAGTAGAAAACAAAATGTTTTTTTAGTGTTACGTATTTCACTTCAAAGGAAAAGGAGAAACATTTGGTAGAATGTAGCTCTTTGATTTGGAACCTTACACATTGAAGTTGACAGCCATGTTTGCTTCAATTCGATTTGTTCAGTAGTCAGTTAAAACAACTGTTTATGTGCATTGACTTTTTTTTTGTTCCCCATCCGGTGTCCGGTACCCACATTGAAGCCGGACTAAATCCGGATTCGGGCTGGGAAGTCCCACATTGGGGAGAAACATTAGGTAGAATGTAGCTCTTTGACTTGGAACTTTACACATTGAAGTTGACAGCCATGTTTGTTTCAATTCGAGTTGTTTTAAGTAGTCAGTCAAACAATTGTTTATGTAAATTCACTTTTTTTTTGTTTCCCATCCGGTGTATGGTATCCACTTTGGAGCCCGACTAAATCCGGATTCGGATCGGGAAGTCCCACATTGTGGAGTAAAACACTCCCTAACAAAGGCGACTCCGTACCTAAGGGGACTCGAACCTGAGACCTCTTGGTTAAGTATGAAGGAGTACTTACCACTCCACCACAACCCTTGTTAGTGTTTATGTACATTCACATTATTTCCCATGTCCATAATTTTATCTTTCCACAATTTGCTTTCAGCTCTTTCTGCATATAGAGAAAATAACAAAAGTTTCCATTGGATCATGTATATAGACTGCACATGTTCAAATTTTAAACAACTTTGCATATGCATATGCAATCAATGACTTGAAATAACTATTACTTTTATGCAGGATCCATATGGTTTTCCTCGGAGATGAAAGCCTTAAGTGATGATTGTGAACGATTTGTTAGCTTCCTTCCCGGTCATATTTATTCAAGCAAAAATGGTATGCTCATCTCTGAGCCTGTATTTCATTCATCTTGACCTATTTATTTCATTTTTTGGATCCCGTTGAAAACAGTCTTAAATCTCATAATGCTGGTGTAATTATTTATCTATTGATCAACCAAAAGAGTGAGATCTACATGTTATTGTTGCGCAAAATTGCTTCTAGGTGATTTCCTCCCATCTATCCAAGCCTTGGTGTAGAGAGTACCATGTACCCGTGTTGTTAGGAGGTAGCAAGTACCCTGTGAAAAGTAGTCGAGGTGCACACAAAGCCTGGTTATCACAATTATAAAAAAATAAAAGAATTGCTTTTAGGAATGCAGCTTCAATCTTGAGGAGTCTTTTGGGATGCTGGATGTACTTTTAGTAATATTAATTGACATGAATCCTTTTGTTTTGTACTTGTGTACTAGCCAAGCAGATTTATTTTACTTTCGAAACCCCTCTATGGATTAAAAGAAAATGGCAAGTGTAATATAATGTTACTAATGGTCCCTTTTTATGTGTTTGCAGTGTTTACGTTAAAATAAGAACCTCAATAAGTAGGAGCTATTGGGTTCTTAAACTAGAGGAGCCCGTAGATAAAAGCCAAATAAAGTAGTATTTCTATGACTTCTTTATTTTGTACAGTGTAGAAGTTTGAGAATATTCTGTTACTAATATTATACATACACTAATCCTTGAAGAATTGCAACCGTTTCAACTTTCATCATATTTACTCTACCAGTATTGATATAATATTCTGGCCATATTAACATCTTAAACTCTATGTCCGATCCATACCGTCATGTAAAATGAAAAGAAGTCGTATATAATGAAATGATGGGAGTACTCACCAATTTTAGTTTTGCATGGATAAAAAGTGAACCACGGTTTTTGGTGTGAAGGAAATATTCAAAATCATCATTGTTATCAAAGTCATCCTTTGCTTTCAAGAACTATTCATTCTATCTCTTAAATAAATTATGTGCAGGAGGACTTAGAAGATGGTACAACCCACCATGGTTTTCGGAAACCATTCCTTCTACTCCATATGATCCCCTTGTCTTACGGAAGGCTTTTGAGAAGGTCAGTTTTTTCTAGATGTTGCATAAAAAATTGTGGCTCAACCATGACATACTCCCCGGACATGTATTTGACATAGCCCTCTAAACTTTAAAAGTAAGCACCTTTCACTTTGTTCTATTTTGAACGTTGTCTTGGACTCTTTCAGGACACATATTCCCTTGACTGATTGGAGAGAAGATATCCTTGATGTAGCTGTCATTTTGATTGTCCTCTTGTTTGTAGTACTTCTCCCTACTAAATAAAGCCTGTGTTTGTCCAAAGAAAATGATAAAATATCAAAGCAACTTGTTGATGGATGTGAACTGTGGAGTGTGCATGATTTTTGGTCTCAGTCATTATCATATCCTTCGACCTTCAAATGCAAATTTTACAACTTTGCATAAAATGTGTCAATAGCTTTTCCTGGGATTTTCCCTTTTTATGTACCCAGTCTCCACTATCTGTCTGTTACTACTGATTTAGTGCATGAAATGCTATTCTTTCTAATCGTAATTTGTAGCTTTCATTAGTAAATAGCAAAAAGAGAATGCTAGGAGCAGTTAAAATAAAAAATAGAAAGCCATTACAAGCTGCGTAATGTGCTTAACAAAATCAGCCAAGATATCATTTACAGCTATTATGGCCATGTTGCACCAAAATCTAAGCTAAGATATACAGCGACCTTTAATTTTTGGTGAGGATTCTTCTTTGTTTCCAAAATATTTCTTGTTTCTTTCCAGCCAAATCCACTAAAAGGTTGTTGGAACTGTTTCAGAGATGGTATGAAGCCTTGTGAATATCCTTTCTGTGCTAACCTTGAAGGAACTGTAGAGTAATTTTTAGCCCACTTAGGCCCAGATACTGAAAAAGAAATCCCATTGTTGAGAGATGAACTTTACAATGCAGAAACACGTGGTTGATGCCCACATTAAATGCTAATCTTATTCTGCACATTTACTTTATGCAGGCTGTAGTTAAGAGACTCATGACGGATGTACCATTTGGTGTGCTTCTCTCTGGCGGACTGGATTCTTCACTTGTTGCTGCAGTGGCTAGCCGCTATTTGGCTGATACAGATGCCGGTCGACAATGGGGATCCCAGTTGCATACGTTTTGCGTAGGCTTGAAGGTGATGATGCTTCCTTAGTGAACATGCTCTGTTTTAGAAATTGTCAACTGAATTATCACATAGAGGTTCTGGACCATGATCACTGTCCCTTTTACATGTTTCATACATAGGATTTGCGAAGTAGTAGCAAAATGGAAATTTTCTATATAAGATACCAATTACCTTCTCAGGAATGAATCTTACCATTAGGATTTGTCGATTTCCTTTTGATATCGTGGTTAATTCTGATATGACCTTACTCAATCCTGCCTTTTATTTTCTTCTTTTAGTTTATATCTCTTGTTGCAGTTATATCTCTCTTTTTTTCATGTCTTGCTTACTTTTGGAGAACTGAAATTTAACTCCAGTTGCAAGGTTTGGTACTATTAACTTGCTTATTTCTTTCATCATTGGTCCTGAAAATGTGCTACTATCTTGTATATGCGGGATCTTGGAATCTTCCCAGTGTGAGTAACTTCAAATGATAATCAGAACTGATCACAGTCATTTCTCTTAACTAAATATACATCTGTTCGAAATTTCTTGTTGCTGCACTTTGATTACCTGTGCTAAACGCTTTCAACACTTCTCATGAGGCCAAATTTGGCAGTAAGTGTACGTAAAACCGTTTAGTGTACCTTATTCAGTAGGTCTGTTATTGTCCATAATCACACACAAGATTCAGAGTGTTTTTAGGAAGCCTATTGGTGTGATTGGTGGATTTCTGAGATGAGTACTTTATCCATCTTTGTAGTGCATTGTTTCTTTTCTTTTGTTTATAATTTGCTGTGTCATTGTAATTTAGGTTGACTTTTCTTTGACTTTAGGGTTCTCCTGATCTGAAAGCTGCCAGAGAGGTGGCAGACTACATTGGAACTCGTCACCATGAGTTTCACTTTACAGTGCAGGTAGCTTTTCCTAATGACGTACCAAAGCTGATTTCCTTTTCCGGAGCATAACCACTTAAGTCAAATTAACTATATACTTGTTTGCATTGCTATGTCAGGAAGGAATTGATGCCTTAGAGGAAGTCATATATCATGTTGAAACATATGATGTGACCACTATCAGAGCCAGTACACCAATGTTTCTCATGTCTCGGAAGATAAAGTCATTGGGTGTGAAAATGGTTTTATCAGGTGAAGGTTCTGATGAAATTTTTGGTGGTTATTTATATTTCCACAAGGCACCCAACAAAGAGGAGTTTCACCAAGAAACTTGTAGAAAGGTGGATCACATTATCAATTTTGCATTCATTCAGGCTTTATTGGAAGTAACTGCATTTCTATTAGAATTATCTTTGAACTATTTCTAGCTCTGATGGATGCTTTGATGTTAATCCAGATTAAAGCACTTCATCTTTATGATTGCTTGAGGGCCAATAAATCTACTTCAGCTTGGGGTGTTGAAGCTCGTGTACCTTTCTTGGATAAAGAATTCATCAATATTGCAATGAACATTGATCCGGAATGGAAAATGGTAATTGCTTCCCCTCTTAAATCTCTAACCCACCTTCACCCAACCATTAAATCTAGATTAACAAAGACCAAGAAAGAAAGATAAATCCTGTTCTTCCTTCAAGGAACAATAAAATGACATCTTACATAAAAAAATGTCAAAAGATTACTGCAAGTTATGTAGAAAAACAGTCTTCAACGTCGTGGTAGACCAGGGTTCAAATCTCAAGAAAAAAAATGTTATGTAATTTTTCTCATATGTTTAAGCCTTGATGCAGAGTTACCTAGTAAATGAGCTACTGAGAAGTTGCAAGTACTTGGTGGATTAGTTGAGGTGCACACAAGTTGACTGAACCATTCTTCATAGAGACAAGTTCAATCTTGTTTTATCATGAGTTTATGTTGTGTTGACTTTCCTGTGTTTATAAATAGATGAGCACATTTCTGGAGCATGATTTAATTTATTTCGCTCTTTGAGGTTTCTGAAGTTATTTCTAAACTCAAGCTTGCTGCGACTTATGTTAGGTCTAGAGAATTCTGCCAGGCAACAAATGGAATGTACATTCAAGTATTTATCTCCTTATTAGAAGTCCAGTGTTACTTGAACGGATCTGATGTATGGGATACAATATAGCTTCATACACATAACCTCATTATAATGTTGCTGATTTCATCTTTACATCTAGTATGATCCTACAATTTAATATATCTCTGTACAGTGACTATTATATACTGAAAATTCTTTCTTGAAACATTACAGATCCGACCTGACCTCGGAAGAATAGAAAAGTGGGTTGTACGTAATGCTTTTGACGATGATCAGAATCCTTATCTGCCAAAGGTTTGTTAGTTTTCTTCTATAAGATCCAAATTCAAAATTTTTTATTCATTTGCATAATAAATAGGCAAGCAGACTCCTTGTTAAAACAAAAAATAAAGAAGCAAGCAAAACCCAAATACGTTGTGTAATTGTGCACAGATGTGTATTGTATGTGTCACATACAAGGGTATCATATGTTCAAAAATCCCAACTTACTCATGCATGTGTAAGACCTATATATATATATATATATCAGTTCAAAGCCATAAATGACAATAAAAAGACATTATGATCAAGTTGTTGAGTCTCCTCTGTTTTCTTTTTTAGCATATTTTGTATAGGCAGAAGGAACAGTTCAGTGATGGAGTTGGCTACAGTTGGATTGATGGCTTGAAGGATCACGCAAACAGTCAAGTGAGCTTTTTTGTTCCTTTTCTCTTCGCTCTTTTTCCAATCCTTCTTCCTTCCTTTTGTGGTAATGCTGAACACATATTGTACATTTGGTCCAGGTTTCTGATTCTATGTTAGCGAATGCAAGTTTTGTTTACCCTCATAACACACCCACAACCAAGGAAGGGTACTACTATAGAACTATTTTCGAGCGATATTTCCCCAAGGTGGGTCTTTCATGTCTCTTTTCTTTATTATTCATGTACAGTTTATGATACTTTCTCCCAAATAATATTTTCTTTTCAATATTACTTGAGCCATTAACAAGATTGCTTCTATCTTGGTATTTGTTGATTAAGGGGTAATATCATAATTTTAATTGTTCTTTGGAGCAGGCTGCTGCAAGAGAAACTGTTCCTGGTGGTCCAAGTGTGGCCTGCAGCACTGCAAAAGCAGTAGAATGGGATGCCGCTTGGTCCAAGAATCTAGATCCATCCGGTCGAGCTGCTCTCGGTGTTCATGAAGCTGCTTATGAGGTTAAAGAACTATGAAGTTGATAAAGCTGTAGTAGCTGTTTGATTGTATATCTTCATTCAAAAACCTGACTTGTTCCACATTTGACTTCTTTTACGAGTTTGAATTCTTTGCTTCTGGTTTTACAATTACCAAAGTTTATTCTACTTGAGAAGAAATATGACGAATATGTGTTATTCATGACATGAAAGCAA</genome_strand>
        <mrna_strand>GGTAACCAGTAACCGCAATCACTTTTTCTTCATTTCAGAAGAAGCGAGAAAAAAAAATTGCGGACAATGTGTGGAATACTTGCAATTTTCGGTTGCACTGATAATTCTCATGCCAAGCGTTCAAGAGTAATCGAACTATCAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGCCATAGAGGACCTGACTGGAGTGGACTGCATAGCCATGAGGACTGTTACCTTGCTCATCAACGATTGGCAATAGTAGACCCAACTTCAGGAGATCAACCGTTGTATAATGAGGACAAGACCATTGTTGTTGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGGAGAGATCTACAACCATAAGGAATTACGGGAGAAACTGAAGTCCCATCAGTTTCGAACTGAAAGTGATTGTGAAGTTATTGCCCATCTT............................................................................................................................................................................................TATGAAGAATATGGAGAAAACTTCGTTGACATGTTGGATGGGATGTTCTCTTTTGTTCTTCTTGATACCCGGGATAAAAGTTTCATCGCTGCTCGGGATGCCATTGGCATTACACCCCTTTATATGGGGTGGGGTCTTGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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......GAGGACTTAGAAGATGGTACAACCCACCATGGTTTTCGGAAACCATTCCTTCTACTCCATATGATCCCCTTGTCTTACGGAAGGCTTTTGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTAGTTAAGAGACTCATGACGGATGTACCATTTGGTGTGCTTCTCTCTGGCGGACTGGATTCTTCACTTGTTGCTGCAGTGGCTAGCCGCTATTTGGCTGATACAGATGCCGGTCGACAATGGGGATCCCAGTTGCATACGTTTTGCGTAGGCTTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCCTGATCTGAAAGCTGCCAGAGAGGTGGCAGACTACATTGGAACTCGTCACCATGAGTTTCACTTTACAGTGCAG..................................................................................................GAAGGAATTGATGCCTTAGAGGAAGTCATATATCATGTTGAAACATATGATGTGACCACTATCAGAGCCAGTACACCAATGTTTCTCATGTCTCGGAAGATAAAGTCATTGGGTGTGAAAATGGTTTTATCAGGTGAAGGTTCTGATGAAATTTTTGGTGGTTATTTATATTTCCACAAGGCACCCAACAAAGAGGAGTTTCACCAAGAAACTTGTAGAAAG....................................................................................................................ATTAAAGCACTTCATCTTTATGATTGCTTGAGGGCCAATAAATCTACTTCAGCTTGGGGTGTTGAAGCTCGTGTACCTTTCTTGGATAAAGAATTCATCAATATTGCAATGAACATTGATCCGGAATGGAAAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGACCTGACCTCGGAAGAATAGAAAAGTGGGTTGTACGTAATGCTTTTGACGATGATCAGAATCCTTATCTGCCAAAG..................................................................................................................................................................................................................................................................................................................CATATTTTGTATAGGCAGAAGGAACAGTTCAGTGATGGAGTTGGCTACAGTTGGATTGATGGCTTGAAGGATCACGCAAACAGTCAA...............................................................................................GTTTCTGATTCTATGTTAGCGAATGCAAGTTTTGTTTACCCTCATAACACACCCACAACCAAGGAAGGGTACTACTATAGAACTATTTTCGAGCGATATTTCCCCAAG........................................................................................................................................................................GCTGCTGCAAGAGAAACTGTTCCTGGTGGTCCAAGTGTGGCCTGCAGCACTGCAAAAGCAGTAGAATGGGATGCCGCTTGGTCCAAGAATCTAGATCCATCCGGTCGAGCTGCTCTCGGTGTTCATGAAGCTGCTTATGAGGTTAAAGAACTATGAAGTTGATAAAGCTGTAGTAGCTGTTTGATTGTATATCTTCATTCAAAAACCTGACTTGTTCCACATTTGACTTCTTTTACGAGTTTGAATTCTTTGCTTCTGGTTTTACAATTACCAAAGTTTATTCTACTTGAGAAGAAATATGACGAATATGTGTTATCCAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>15</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="3227" PGL_stop="3615"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3227" e_stop="3615"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3227" e_stop="3615" e_length="389"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3227" stop="3615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341194" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCATTGTGTCTTCATAATCCTGTGAACCGTCATGCCAAAAGCCTTTGGAGAAGAGCACAGGCATATGACATGCTTGGTTTAGCTAAGGAGAGCTTATTAGATGCTATTCTGTTTATAAATGAGTGTTCACAATCAAATGATCCTGATCTGTCTTTAAGGCAAAACAAGGTTCCTGATTATGCTGAGCGTTTGGTAAAAAAGCAGATGCGTGCAGCTTGGTTATTTAGAGAGGCTGCTATTAAACATGGTGGAGTTCAATGTGAGGGTGATGCTGGAGACATGTGTGGCCAGGAAACTGATGATTCAGAATGGGAGACAGCAAGTGAAAGTGAAATTGGAAATGAGGAGAGAGATGAAATTGGCGATGATATTTGTGGATGGGAAAATG</gDNA_template>
            <first_frame> C  I  V  S  S  *  S  C  E  P  S  C  Q  K  P  L  E  K  S  T  G  I  *  H  A  W  F  S  *  G  E  L  I  R  C  Y  S  V  Y  K  *  V  F  T  I  K  *  S  *  S  V  F  K  A  K  Q  G  S  *  L  C  *  A  F  G  K  K  A  D  A  C  S  L  V  I  *  R  G  C  Y  *  T  W  W  S  S  M  *  G  *  C  W  R  H  V  W  P  G  N  *  *  F  R  M  G  D  S  K  *  K  *  N  W  K  *  G  E  R  *  N  W  R  *  Y  L  W  M  G  K   </first_frame>
            <second_frame>  A  L  C  L  H  N  P  V  N  R  H  A  K  S  L  W  R  R  A  Q  A  Y  D  M  L  G  L  A  K  E  S  L  L  D  A  I  L  F  I  N  E  C  S  Q  S  N  D  P  D  L  S  L  R  Q  N  K  V  P  D  Y  A  E  R  L  V  K  K  Q  M  R  A  A  W  L  F  R  E  A  A  I  K  H  G  G  V  Q  C  E  G  D  A  G  D  M  C  G  Q  E  T  D  D  S  E  W  E  T  A  S  E  S  E  I  G  N  E  E  R  D  E  I  G  D  D  I  C  G  W  E  N  </second_frame>
            <third_frame>   H  C  V  F  I  I  L  *  T  V  M  P  K  A  F  G  E  E  H  R  H  M  T  C  L  V  *  L  R  R  A  Y  *  M  L  F  C  L  *  M  S  V  H  N  Q  M  I  L  I  C  L  *  G  K  T  R  F  L  I  M  L  S  V  W  *  K  S  R  C  V  Q  L  G  Y  L  E  R  L  L  L  N  M  V  E  F  N  V  R  V  M  L  E  T  C  V  A  R  K  L  M  I  Q  N  G  R  Q  Q  V  K  V  K  L  E  M  R  R  E  M  K  L  A  M  I  F  V  D  G  K  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3228" stop="3614"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALCLHNPVNRHAKSLWRRAQAYDMLGLAKESLLDAILFINECSQSNDPDLSLRQNKVPDYAERLVKKQMRAAWLFREAAIKHGGVQCEGDAGDMCGQETDDSEWETASESEIGNEERDEIGDDICGWEN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="35946" PGL_stop="41706"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35946" e_stop="36047"/>
            <exon e_start="36127" e_stop="36276"/>
            <exon e_start="36353" e_stop="36425"/>
            <exon e_start="39640" e_stop="39820"/>
            <exon e_start="41270" e_stop="41413"/>
            <exon e_start="41488" e_stop="41706"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.993" e_score="0.990"/>
          <exon-intron don_prob="0.967" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.902" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="35946" e_stop="36047" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.993">
            <gDNA_intron_boundary i_start="36048" i_stop="36126" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36127" e_stop="36276" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.967" acc_prob="0.978">
            <gDNA_intron_boundary i_start="36277" i_stop="36352" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="36353" e_stop="36425" e_length="73"/>
          </exon>
          <intron i_serial="3" don_prob="0.985" acc_prob="0.968">
            <gDNA_intron_boundary i_start="36426" i_stop="39639" i_length="3214"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39640" e_stop="39820" e_length="181"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="39821" i_stop="41269" i_length="1449"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41270" e_stop="41413" e_length="144"/>
          </exon>
          <intron i_serial="5" don_prob="0.902" acc_prob="0.980">
            <gDNA_intron_boundary i_start="41414" i_stop="41487" i_length="74"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="41488" e_stop="41706" e_length="219"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35946" stop="36047"/>
              <exon start="36127" stop="36276"/>
              <exon start="36353" stop="36425"/>
              <exon start="39640" stop="39820"/>
              <exon start="41270" stop="41413"/>
              <exon start="41488" stop="41706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340513" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGGATGCTGATCAGAGATTAACTCAAGATCTGGAGAAGCTAACCGCTGACTTGTCTAGTCTGGTAACTGGAATGGTGAAGCCAACTGTTGACATTCTATG : GTTCACATGGAGAATGAAAATGCTAACTGGCCAGAGGGGAGTCGCTATATTGTATGCTTACATGTTATTAGGTTTGGGTTTCCTGAGATGTGTTACTCCTGACTTTGGTGAACTGGCAAGTCGAGAACAACAGCTTGAAGGAACTTTCAG : GTTCATGCATGAAAGGTTGCGAACACATGCTGAATCTGTTGCTTTCTTTGGAGGTGGTGCTCGTGAAAAAGAG : ATGGTTGAAGCAAGGTTTAAAGAACTTCTTCACCACTCTTCTTTGCTTCTTAAGAAGAAATGGTTATTTGGCATAATAGATGAGTTCATCACGAAGCAGCTTCCTCACAATGTTACTTGGGGATTGAGTTTGTTGTATGCTATGGAGCACAAGGGCGACCGGGCTTTGACTTCAACTCAAG : ATGTACCTGAAGGTGTTAGTTCATCGCCATCCTCTGAGGATGTAATTTCTTTCTCTGAAGTGGACATCATTACACCAGGACAAAAAGTCTTGGCTAGGAAGCTAACATGTGATATAGTGAAGGGGAAAAGCCTTCTTGTAACTG : GCCCTAATGGAAGTGGAAAGAGTTCAATCTTCAGAGTCCTTCGTGGTTTATGGCCAGTCGTGAGTGGAAATCTAGTTAAACCAGGCCAACCGCTTAACTCAGAATTAGGCAGTGGCATCTTCTATGTACCCCAACGACCATATACGTGCTTAGGAACTCTAAGGGATCAAATTACATATCCTCTCTCACATGAAGTGGCTGAGAAAAGGGTACAGGCTA</gDNA_template>
            <first_frame> L  G  C  *  S  E  I  N  S  R  S  G  E  A  N  R  *  L  V  *  S  G  N  W  N  G  E  A  N  C  *  H  S  M  :  V  H  M  E  N  E  N  A  N  W  P  E  G  S  R  Y  I  V  C  L  H  V  I  R  F  G  F  P  E  M  C  Y  S  *  L  W  *  T  G  K  S  R  T  T  A  *  R  N  F  Q  :  V  H  A  *  K  V  A  N  T  C  *  I  C  C  F  L  W  R  W  C  S  *  K  R   : D  G  *  S  K  V  *  R  T  S  S  P  L  F  F  A  S  *  E  E  M  V  I  W  H  N  R  *  V  H  H  E  A  A  S  S  Q  C  Y  L  G  I  E  F  V  V  C  Y  G  A  Q  G  R  P  G  F  D  F  N  S  R :   C  T  *  R  C  *  F  I  A  I  L  *  G  C  N  F  F  L  *  S  G  H  H  Y  T  R  T  K  S  L  G  *  E  A  N  M  *  Y  S  E  G  E  K  P  S  C  N  W :   P  *  W  K  W  K  E  F  N  L  Q  S  P  S  W  F  M  A  S  R  E  W  K  S  S  *  T  R  P  T  A  *  L  R  I  R  Q  W  H  L  L  C  T  P  T  T  I  Y  V  L  R  N  S  K  G  S  N  Y  I  S  S  L  T  *  S  G  *  E  K  G  T  G   </first_frame>
            <second_frame>  L  D  A  D  Q  R  L  T  Q  D  L  E  K  L  T  A  D  L  S  S  L  V  T  G  M  V  K  P  T  V  D  I  L  W :   F  T  W  R  M  K  M  L  T  G  Q  R  G  V  A  I  L  Y  A  Y  M  L  L  G  L  G  F  L  R  C  V  T  P  D  F  G  E  L  A  S  R  E  Q  Q  L  E  G  T  F  R :   F  M  H  E  R  L  R  T  H  A  E  S  V  A  F  F  G  G  G  A  R  E  K  E  :  M  V  E  A  R  F  K  E  L  L  H  H  S  S  L  L  L  K  K  K  W  L  F  G  I  I  D  E  F  I  T  K  Q  L  P  H  N  V  T  W  G  L  S  L  L  Y  A  M  E  H  K  G  D  R  A  L  T  S  T  Q   : D  V  P  E  G  V  S  S  S  P  S  S  E  D  V  I  S  F  S  E  V  D  I  I  T  P  G  Q  K  V  L  A  R  K  L  T  C  D  I  V  K  G  K  S  L  L  V  T   : G  P  N  G  S  G  K  S  S  I  F  R  V  L  R  G  L  W  P  V  V  S  G  N  L  V  K  P  G  Q  P  L  N  S  E  L  G  S  G  I  F  Y  V  P  Q  R  P  Y  T  C  L  G  T  L  R  D  Q  I  T  Y  P  L  S  H  E  V  A  E  K  R  V  Q  A  </second_frame>
            <third_frame>   W  M  L  I  R  D  *  L  K  I  W  R  S  *  P  L  T  C  L  V  W  *  L  E  W  *  S  Q  L  L  T  F  Y   : G  S  H  G  E  *  K  C  *  L  A  R  G  E  S  L  Y  C  M  L  T  C  Y  *  V  W  V  S  *  D  V  L  L  L  T  L  V  N  W  Q  V  E  N  N  S  L  K  E  L  S   : G  S  C  M  K  G  C  E  H  M  L  N  L  L  L  S  L  E  V  V  L  V  K  K  R :   W  L  K  Q  G  L  K  N  F  F  T  T  L  L  C  F  L  R  R  N  G  Y  L  A  *  *  M  S  S  S  R  S  S  F  L  T  M  L  L  G  D  *  V  C  C  M  L  W  S  T  R  A  T  G  L  *  L  Q  L  K  :  M  Y  L  K  V  L  V  H  R  H  P  L  R  M  *  F  L  S  L  K  W  T  S  L  H  Q  D  K  K  S  W  L  G  S  *  H  V  I  *  *  R  G  K  A  F  L  *  L  :  A  L  M  E  V  E  R  V  Q  S  S  E  S  F  V  V  Y  G  Q  S  *  V  E  I  *  L  N  Q  A  N  R  L  T  Q  N  *  A  V  A  S  S  M  Y  P  N  D  H  I  R  A  *  E  L  *  G  I  K  L  H  I  L  S  H  M  K  W  L  R  K  G  Y  R  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35947" stop="36047"/>
                    <exon start="36127" stop="36276"/>
                    <exon start="36353" stop="36425"/>
                    <exon start="39640" stop="39820"/>
                    <exon start="41270" stop="41413"/>
                    <exon start="41488" stop="41705"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>867</number_coding_nucleotides>
                  <number_encoded_amino_acids>289</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDADQRLTQDLEKLTADLSSLVTGMVKPTVDILWFTWRMKMLTGQRGVAILYAYMLLGLGFLRCVTPDFGELASREQQLEGTFRFMHERLRTHAESVAFFGGGAREKEMVEARFKELLHHSSLLLKKKWLFGIIDEFITKQLPHNVTWGLSLLYAMEHKGDRALTSTQDVPEGVSSSPSSEDVISFSEVDIITPGQKVLARKLTCDIVKGKSLLVTGPNGSGKSSIFRVLRGLWPVVSGNLVKPGQPLNSELGSGIFYVPQRPYTCLGTLRDQITYPLSHEVAEKRVQA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="43952" PGL_stop="44909"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43952" e_stop="43974"/>
            <exon e_start="44079" e_stop="44131"/>
            <exon e_start="44233" e_stop="44311"/>
            <exon e_start="44407" e_stop="44909"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.827" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.715" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43952" e_stop="43974" e_length="23"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.827">
            <gDNA_intron_boundary i_start="43975" i_stop="44078" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44079" e_stop="44131" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="44132" i_stop="44232" i_length="101"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44233" e_stop="44311" e_length="79"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.715">
            <gDNA_intron_boundary i_start="44312" i_stop="44406" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="44407" e_stop="44909" e_length="503"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43952" stop="43974"/>
              <exon start="44079" stop="44131"/>
              <exon start="44233" stop="44311"/>
              <exon start="44407" stop="44909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333085" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAACAACAACGATTAGGAATG : GCACGCTTATTTTTTCACAAGCCACGGTTTGGAATCCTTGACGAATGTACAAA : TGCTACTAGTGTTGATGTTGAAGAACACCTGTATAGGCTTGCTAAGGATGCTGGCATTACTGTTGTTACATCCTCACAG : CGCCCTGCTTTAATACCTTTCCATTCTGTGGAATTACGGTTGATTGATGGTGAAGGCAAGTGGCAGCTGCGTTCAATTAAGATGGATGAGGAGGGGGAAGACGAACCAAATGAATACACACAACAATTGTGAGTACGATGATGTATTCCAATGTTGTGAAAACGTTCATAGAGCCAAAAATAATGAATGAATTATGAATGTAATAGTTTGCAGTTAGATTGAGGGTAGGAAACTATATAGTTAGGGTATACAAAAACTATTTTAAGTTGTTTCTTGTAATATTTCATATAGTTAACTGTGTATAGCGCCTAGTTCCCGTCGTTGTAAAAGGTTTAGGCATAATCTTTCCGGTCAGCTCTCCGTGAATAAAAATGGCAGGTAGAAAAGGAGGCTGACAGATTAATTTACTTATATTATCTTCTACATTTTACAATGTATTTTGATGATATTTTTCTGTTTAAATATACCAAAAATTTAATGGAGTGTATATTTTTGCCCTCTCT</gDNA_template>
            <first_frame> E  N  N  N  D  *  E  W :   H  A  Y  F  F  T  S  H  G  L  E  S  L  T  N  V  Q   : M  L  L  V  L  M  L  K  N  T  C  I  G  L  L  R  M  L  A  L  L  L  L  H  P  H  S :   A  L  L  *  Y  L  S  I  L  W  N  Y  G  *  L  M  V  K  A  S  G  S  C  V  Q  L  R  W  M  R  R  G  K  T  N  Q  M  N  T  H  N  N  C  E  Y  D  D  V  F  Q  C  C  E  N  V  H  R  A  K  N  N  E  *  I  M  N  V  I  V  C  S  *  I  E  G  R  K  L  Y  S  *  G  I  Q  K  L  F  *  V  V  S  C  N  I  S  Y  S  *  L  C  I  A  P  S  S  R  R  C  K  R  F  R  H  N  L  S  G  Q  L  S  V  N  K  N  G  R  *  K  R  R  L  T  D  *  F  T  Y  I  I  F  Y  I  L  Q  C  I  L  M  I  F  F  C  L  N  I  P  K  I  *  W  S  V  Y  F  C  P  L  </first_frame>
            <second_frame>  R  T  T  T  I  R  N   : G  T  L  I  F  S  Q  A  T  V  W  N  P  *  R  M  Y  K  :  C  Y  *  C  *  C  *  R  T  P  V  *  A  C  *  G  C  W  H  Y  C  C  Y  I  L  T   : A  P  C  F  N  T  F  P  F  C  G  I  T  V  D  *  W  *  R  Q  V  A  A  A  F  N  *  D  G  *  G  G  G  R  R  T  K  *  I  H  T  T  I  V  S  T  M  M  Y  S  N  V  V  K  T  F  I  E  P  K  I  M  N  E  L  *  M  *  *  F  A  V  R  L  R  V  G  N  Y  I  V  R  V  Y  K  N  Y  F  K  L  F  L  V  I  F  H  I  V  N  C  V  *  R  L  V  P  V  V  V  K  G  L  G  I  I  F  P  V  S  S  P  *  I  K  M  A  G  R  K  G  G  *  Q  I  N  L  L  I  L  S  S  T  F  Y  N  V  F  *  *  Y  F  S  V  *  I  Y  Q  K  F  N  G  V  Y  I  F  A  L  S </second_frame>
            <third_frame>   E  Q  Q  R  L  G  M  :  A  R  L  F  F  H  K  P  R  F  G  I  L  D  E  C  T  N :   A  T  S  V  D  V  E  E  H  L  Y  R  L  A  K  D  A  G  I  T  V  V  T  S  S  Q  :  R  P  A  L  I  P  F  H  S  V  E  L  R  L  I  D  G  E  G  K  W  Q  L  R  S  I  K  M  D  E  E  G  E  D  E  P  N  E  Y  T  Q  Q  L  *  V  R  *  C  I  P  M  L  *  K  R  S  *  S  Q  K  *  *  M  N  Y  E  C  N  S  L  Q  L  D  *  G  *  E  T  I  *  L  G  Y  T  K  T  I  L  S  C  F  L  *  Y  F  I  *  L  T  V  Y  S  A  *  F  P  S  L  *  K  V  *  A  *  S  F  R  S  A  L  R  E  *  K  W  Q  V  E  K  E  A  D  R  L  I  Y  L  Y  Y  L  L  H  F  T  M  Y  F  D  D  I  F  L  F  K  Y  T  K  N  L  M  E  C  I  F  L  P  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43954" stop="43974"/>
                    <exon start="44079" stop="44131"/>
                    <exon start="44233" stop="44311"/>
                    <exon start="44407" stop="44538"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQQRLGMARLFFHKPRFGILDECTNATSVDVEEHLYRLAKDAGITVVTSSQRPALIPFHSVELRLIDGEGKWQLRSIKMDEEGEDEPNEYTQQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="65811" PGL_stop="66894"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65811" e_stop="66894"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="65811" e_stop="66894" e_length="1084"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65811" stop="66894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322792" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGAGTCTATGATACGCCGGAAGCGTAATAGACCAATCAATTCCAAATATAAAATTCCTTGAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAAGAGCACATTGACATAACAATTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAATGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATGAGGTAGCGCTCAATGATATAATCTTGAATTCAAATCTGTCATATAGTGTGAACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACTGTAAGATATCAAATACGATTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTAGTGGAGATGTTTTCTCCTTTGGTGGATGAAATGAGGTTTGTTTTGATCTGGCAACATATGAAAACTTGAATGCATGTAAATGAATAATTTTAATGTCTAGCTAGACAATGAATGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAATATATTTGTCTAACAGTGCACATACACTGAAAATTTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGGCATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACCAGATATTTGTTTTGCAGTAAATTTACT</gDNA_template>
            <first_frame> Q  S  L  *  Y  A  G  S  V  I  D  Q  S  I  P  N  I  K  F  L  E  E  G  R  S  K  *  S  I  W  S  *  *  *  G  K  C  Y  K  R  A  H  *  H  N  N  S  *  N  L  E  K  G  S  G  T  *  N  N  E  K  *  R  D  L  D  K  L  C  L  V  G  I  D  I  K  *  P  S  T  V  S  L  I  *  G  S  A  Q  *  Y  N  L  E  F  K  S  V  I  *  C  E  Q  I  N  G  W  P  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  D  W  *  S  I  N  Q  G  I  M  S  V  G  Y  K  *  I  I  M  R  *  Y  N  C  K  I  S  N  T  I  C  A  L  G  H  K  G  L  S  Q  K  S  *  H  *  W  R  C  F  L  L  W  W  M  K  *  G  L  F  *  S  G  N  I  *  K  L  E  C  M  *  M  N  N  F  N  V  *  L  D  N  E  C  Y  M  K  I  L  E  T  I  E  V  S  E  A  Y  K  S  L  K  E  T  F  P  I  K  L  Q  E  S  L  Y  G  L  K  *  S  R  K  K  K  G  T  K  E  *  S  *  L  S  L  Y  F  Y  E  K  V  L  V  R  Q  N  F  V  L  T  Y  R  L  L  I  *  Q  I  I  Y  L  S  N  S  A  H  T  L  K  I  F  D  A  I  L  C  G  Y  I  A  F  I  E  Y  P  N  D  Y  E  I  T  W  H  K  *  *  F  S  L  I  S  K  E  G  *  R  V  S  W  *  *  N  S  I  L  V  Q  S  G  H  *  C  I  L  L  T  I  F  D  Q  I  F  V  L  Q  *  I  Y  </first_frame>
            <second_frame>  R  V  Y  D  T  P  E  A  *  *  T  N  Q  F  Q  I  *  N  S  L  K  K  E  G  A  N  D  Q  Y  G  H  D  N  E  A  S  A  I  K  E  H  I  D  I  T  I  H  K  I  L  K  K  V  Q  V  P  E  I  M  K  N  E  E  I  S  I  S  Y  V  L  L  E  S  I  S  N  N  R  R  R  Y  L  *  Y  E  V  A  L  N  D  I  I  L  N  S  N  L  S  Y  S  V  N  R  *  M  V  G  Q  V  K  C  T  I  Q  V  Y  F  V  S  L  R  K  V  T  F  W  T  G  S  P  *  I  K  V  *  C  Q  W  G  T  N  K  L  L  C  D  S  I  T  V  R  Y  Q  I  R  F  V  P  W  G  I  K  V  Y  R  K  N  P  D  I  S  G  D  V  F  S  F  G  G  *  N  E  V  C  F  D  L  A  T  Y  E  N  L  N  A  C  K  *  I  I  L  M  S  S  *  T  M  N  V  I  *  K  S  L  K  Q  S  R  C  L  K  H  I  R  V  *  K  K  L  F  Q  *  S  F  K  N  P  Y  M  D  *  N  S  Q  G  R  K  R  V  Q  K  N  D  P  N  C  P  C  I  F  M  K  R  S  W  *  D  K  I  L  S  *  P  T  D  C  *  F  D  K  *  Y  I  C  L  T  V  H  I  H  *  K  F  L  M  Q  F  Y  V  D  I  S  H  S  L  S  T  P  M  I  M  R  S  L  G  I  N  D  D  S  V  *  S  Q  K  K  D  E  E  F  L  G  D  E  T  L  S  W  C  N  Q  G  T  S  A  S  Y  *  Q  Y  L  T  R  Y  L  F  C  S  K  F  T </second_frame>
            <third_frame>   E  S  M  I  R  R  K  R  N  R  P  I  N  S  K  Y  K  I  P  *  R  R  K  E  Q  M  I  N  M  V  M  I  M  R  Q  V  L  *  K  S  T  L  T  *  Q  F  I  K  S  *  K  R  F  R  Y  L  K  *  *  K  M  K  R  S  R  *  V  M  S  C  W  N  R  Y  Q  I  T  V  D  G  I  F  D  M  R  *  R  S  M  I  *  S  *  I  Q  I  C  H  I  V  *  T  D  K  W  L  A  K  *  N  A  Q  F  K  Y  I  L  F  H  L  E  K  *  H  F  G  L  V  V  H  K  S  R  Y  N  V  S  G  V  Q  I  N  Y  Y  A  I  V  *  L  *  D  I  K  Y  D  L  C  L  G  A  *  R  F  I  A  K  I  L  T  L  V  E  M  F  S  P  L  V  D  E  M  R  F  V  L  I  W  Q  H  M  K  T  *  M  H  V  N  E  *  F  *  C  L  A  R  Q  *  M  L  Y  E  N  P  *  N  N  R  G  V  *  S  I  *  E  F  E  R  N  F  S  N  K  A  S  R  I  L  I  W  I  E  I  V  K  E  E  K  G  Y  K  R  M  I  L  I  V  L  V  F  L  *  K  G  L  G  K  T  K  F  C  L  D  L  Q  I  V  N  L  T  N  N  I  F  V  *  Q  C  T  Y  T  E  N  F  *  C  N  F  M  W  I  Y  R  I  H  *  V  P  Q  *  L  *  D  H  L  A  *  M  M  I  Q  F  D  L  K  R  R  M  K  S  F  L  V  M  K  L  Y  L  G  A  I  R  A  L  V  H  L  T  N  N  I  *  P  D  I  C  F  A  V  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65863" stop="66060"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSLKKEGANDQYGHDNEASAIKEHIDITIHKILKKVQVPEIMKNEEISISYVLLESISNNRRRYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="68285" PGL_stop="71460"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68285" e_stop="68470"/>
            <exon e_start="68546" e_stop="68619"/>
            <exon e_start="70354" e_stop="70489"/>
            <exon e_start="70613" e_stop="70927"/>
            <exon e_start="71015" e_stop="71460"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.903" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68285" e_stop="68470" e_length="186"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="68471" i_stop="68545" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68546" e_stop="68619" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.903">
            <gDNA_intron_boundary i_start="68620" i_stop="70353" i_length="1734"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="70354" e_stop="70489" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.975">
            <gDNA_intron_boundary i_start="70490" i_stop="70612" i_length="123"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="70613" e_stop="70927" e_length="315"/>
          </exon>
          <intron i_serial="4" don_prob="0.966" acc_prob="0.997">
            <gDNA_intron_boundary i_start="70928" i_stop="71014" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="71015" e_stop="71460" e_length="446"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68285" stop="68470"/>
              <exon start="68546" stop="68619"/>
              <exon start="70354" stop="70489"/>
              <exon start="70613" stop="70927"/>
              <exon start="71015" stop="71460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316800" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGTTTTATAAGATAAAGCAAAGACTTCCCATTTTCAAATTTCAGCTAAAATGGAGAGAGCAACACCTGTACGGAAGCCTAACACCTCTGCCGCCGATCTGCTCACCTGGTCTGAAGTTCCGCCGGCGAACAACTCAGCTTCTGCCTCCGGCAATGCATCTCGCTCCGGCGCTCGTTCTCATCAG : CCTTCTGATGGAATCAGTAAGGTTCTGTTTGGAGGTCAAATTACTGAAGAGGAAGCTGAGAGCTTGAACAAACG : TAAACCATGTTCAGGGTACAAACTGAAGGAGATGAATGGCAGCAAAATCTTTTCTGCTGATGGTGAAGATGATGCATCTGAATCAGGAGCTGTTAATGGTAACTTCAACAACAGGACATCTGTCCGCATTGTTCAG : CAAGCTGCAAATGGAATAAGCCAGATATCATTCAGTACTGAAGAAAGGATCTCTCCAAAGAAACCTATCACACTTACAGAAGTGGCAAAACAGAGAGAGTTGAGCGGAACACTAGAAAGTGATTCAGATAGCAATATGAAGAAGCAGCTTTCAGATGCAAAGAGCAAGGAACTCAGTGGAAATGACATATTTGGCCCTCCCGCAGAAATTCCTCCTAGATCTTTGGCTGCTGCCCGATCCATAGAGTCAAAAGAAAGCAAAGACATGGGTGAACCTGCTCCACGACTTGTACGTACGTCTGTCAAGGTTTCTAAT : CCTGCTGGTGGTCAAAGCAATATTTTGTTTGGTGATGAACCTGTTGTCAACACAGTAAAGAAAATACATAACCAGAAGTTTGCAGAGTTGACCGGCAATGACATTTTCAAGGGAGATATTCCTCCTGGATCTGCAGAAAAGCCACTGAGCAGAGCAAAGCTGAGAGAAATGAGTGGAAATGATATTTTTTCTGATGGAAAAGTTGAATCCAGAGATTATTTTGGTGGCGTTCGTAAACCACCAGGCGGAGAAAGCAGCATCGCGCTGGTTTAGATAAATGTCATCAGACTGCTGCTATGTTTGACCTGTAGTGTTCCTGCAACATTTCACTTCTAATGTTTCATGGGTTTTAGAATTGAGGGTTGTAGATGATATGTGTTTAACCATGTTGTACGGACAACTTCTAAACTATAATTTACATAAACTTGGAGGATTTGCCTAACATA</gDNA_template>
            <first_frame> F  V  L  *  D  K  A  K  T  S  H  F  Q  I  S  A  K  M  E  R  A  T  P  V  R  K  P  N  T  S  A  A  D  L  L  T  W  S  E  V  P  P  A  N  N  S  A  S  A  S  G  N  A  S  R  S  G  A  R  S  H  Q  :  P  S  D  G  I  S  K  V  L  F  G  G  Q  I  T  E  E  E  A  E  S  L  N  K  R :   K  P  C  S  G  Y  K  L  K  E  M  N  G  S  K  I  F  S  A  D  G  E  D  D  A  S  E  S  G  A  V  N  G  N  F  N  N  R  T  S  V  R  I  V  Q  :  Q  A  A  N  G  I  S  Q  I  S  F  S  T  E  E  R  I  S  P  K  K  P  I  T  L  T  E  V  A  K  Q  R  E  L  S  G  T  L  E  S  D  S  D  S  N  M  K  K  Q  L  S  D  A  K  S  K  E  L  S  G  N  D  I  F  G  P  P  A  E  I  P  P  R  S  L  A  A  A  R  S  I  E  S  K  E  S  K  D  M  G  E  P  A  P  R  L  V  R  T  S  V  K  V  S  N  :  P  A  G  G  Q  S  N  I  L  F  G  D  E  P  V  V  N  T  V  K  K  I  H  N  Q  K  F  A  E  L  T  G  N  D  I  F  K  G  D  I  P  P  G  S  A  E  K  P  L  S  R  A  K  L  R  E  M  S  G  N  D  I  F  S  D  G  K  V  E  S  R  D  Y  F  G  G  V  R  K  P  P  G  G  E  S  S  I  A  L  V  *  I  N  V  I  R  L  L  L  C  L  T  C  S  V  P  A  T  F  H  F  *  C  F  M  G  F  R  I  E  G  C  R  *  Y  V  F  N  H  V  V  R  T  T  S  K  L  *  F  T  *  T  W  R  I  C  L  T   </first_frame>
            <second_frame>  L  F  Y  K  I  K  Q  R  L  P  I  F  K  F  Q  L  K  W  R  E  Q  H  L  Y  G  S  L  T  P  L  P  P  I  C  S  P  G  L  K  F  R  R  R  T  T  Q  L  L  P  P  A  M  H  L  A  P  A  L  V  L  I  S :   L  L  M  E  S  V  R  F  C  L  E  V  K  L  L  K  R  K  L  R  A  *  T  N   : V  N  H  V  Q  G  T  N  *  R  R  *  M  A  A  K  S  F  L  L  M  V  K  M  M  H  L  N  Q  E  L  L  M  V  T  S  T  T  G  H  L  S  A  L  F  S :   K  L  Q  M  E  *  A  R  Y  H  S  V  L  K  K  G  S  L  Q  R  N  L  S  H  L  Q  K  W  Q  N  R  E  S  *  A  E  H  *  K  V  I  Q  I  A  I  *  R  S  S  F  Q  M  Q  R  A  R  N  S  V  E  M  T  Y  L  A  L  P  Q  K  F  L  L  D  L  W  L  L  P  D  P  *  S  Q  K  K  A  K  T  W  V  N  L  L  H  D  L  Y  V  R  L  S  R  F  L  I :   L  L  V  V  K  A  I  F  C  L  V  M  N  L  L  S  T  Q  *  R  K  Y  I  T  R  S  L  Q  S  *  P  A  M  T  F  S  R  E  I  F  L  L  D  L  Q  K  S  H  *  A  E  Q  S  *  E  K  *  V  E  M  I  F  F  L  M  E  K  L  N  P  E  I  I  L  V  A  F  V  N  H  Q  A  E  K  A  A  S  R  W  F  R  *  M  S  S  D  C  C  Y  V  *  P  V  V  F  L  Q  H  F  T  S  N  V  S  W  V  L  E  L  R  V  V  D  D  M  C  L  T  M  L  Y  G  Q  L  L  N  Y  N  L  H  K  L  G  G  F  A  *  H  </second_frame>
            <third_frame>   C  F  I  R  *  S  K  D  F  P  F  S  N  F  S  *  N  G  E  S  N  T  C  T  E  A  *  H  L  C  R  R  S  A  H  L  V  *  S  S  A  G  E  Q  L  S  F  C  L  R  Q  C  I  S  L  R  R  S  F  S  S   : A  F  *  W  N  Q  *  G  S  V  W  R  S  N  Y  *  R  G  S  *  E  L  E  Q  T  :  *  T  M  F  R  V  Q  T  E  G  D  E  W  Q  Q  N  L  F  C  *  W  *  R  *  C  I  *  I  R  S  C  *  W  *  L  Q  Q  Q  D  I  C  P  H  C  S   : A  S  C  K  W  N  K  P  D  I  I  Q  Y  *  R  K  D  L  S  K  E  T  Y  H  T  Y  R  S  G  K  T  E  R  V  E  R  N  T  R  K  *  F  R  *  Q  Y  E  E  A  A  F  R  C  K  E  Q  G  T  Q  W  K  *  H  I  W  P  S  R  R  N  S  S  *  I  F  G  C  C  P  I  H  R  V  K  R  K  Q  R  H  G  *  T  C  S  T  T  C  T  Y  V  C  Q  G  F  *   : S  C  W  W  S  K  Q  Y  F  V  W  *  *  T  C  C  Q  H  S  K  E  N  T  *  P  E  V  C  R  V  D  R  Q  *  H  F  Q  G  R  Y  S  S  W  I  C  R  K  A  T  E  Q  S  K  A  E  R  N  E  W  K  *  Y  F  F  *  W  K  S  *  I  Q  R  L  F  W  W  R  S  *  T  T  R  R  R  K  Q  H  R  A  G  L  D  K  C  H  Q  T  A  A  M  F  D  L  *  C  S  C  N  I  S  L  L  M  F  H  G  F  *  N  *  G  L  *  M  I  C  V  *  P  C  C  T  D  N  F  *  T  I  I  Y  I  N  L  E  D  L  P  N  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68297" stop="68470"/>
                    <exon start="68546" stop="68619"/>
                    <exon start="70354" stop="70489"/>
                    <exon start="70613" stop="70927"/>
                    <exon start="71015" stop="71287"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>969</number_coding_nucleotides>
                  <number_encoded_amino_acids>323</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKAKTSHFQISAKMERATPVRKPNTSAADLLTWSEVPPANNSASASGNASRSGARSHQPSDGISKVLFGGQITEEEAESLNKRKPCSGYKLKEMNGSKIFSADGEDDASESGAVNGNFNNRTSVRIVQQAANGISQISFSTEERISPKKPITLTEVAKQRELSGTLESDSDSNMKKQLSDAKSKELSGNDIFGPPAEIPPRSLAAARSIESKESKDMGEPAPRLVRTSVKVSNPAGGQSNILFGDEPVVNTVKKIHNQKFAELTGNDIFKGDIPPGSAEKPLSRAKLREMSGNDIFSDGKVESRDYFGGVRKPPGGESSIALV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="75324" PGL_stop="71586"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75324" e_stop="75063"/>
            <exon e_start="73803" e_stop="73658"/>
            <exon e_start="73448" e_stop="73230"/>
            <exon e_start="72460" e_stop="72248"/>
            <exon e_start="72159" e_stop="71586"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.568" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.613" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75324" e_stop="75063" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.568">
            <gDNA_intron_boundary i_start="75062" i_stop="73804" i_length="1259"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73803" e_stop="73658" e_length="146"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.985">
            <gDNA_intron_boundary i_start="73657" i_stop="73449" i_length="209"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73448" e_stop="73230" e_length="219"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.613">
            <gDNA_intron_boundary i_start="73229" i_stop="72461" i_length="769"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="72460" e_stop="72248" e_length="213"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="72247" i_stop="72160" i_length="88"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72159" e_stop="71586" e_length="574"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75324" stop="75063"/>
              <exon start="73803" stop="73658"/>
              <exon start="73448" stop="73230"/>
              <exon start="72460" stop="72248"/>
              <exon start="72159" stop="71586"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314161" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATAAAAGTTATGTTACGTTACAAAAATAATAAAATCGTGTATCCCAATGACTTTTGCGATGGCAAAAAATGTCTGAATCCACTTTTTATGTTCCCACGTATATTCTTGAGATTGTACATATACTATAGTTTTGACTCATAAATAATTCAAGAACACACAGCACATTCTCAAGAAAGGGAAAAAAAATGTCTAGTCTTAAAGTTCCAGCATCAGTTCCAGATCCTTATGAAGATGCTGAGCAACTCAAAAAAGCTTTTAAAG : GATGGGGCACAAATGAGGAACTTATTATTCAGATTCTGGCTCATAGGAATGCAGCACAACGCAAGTTAATCCGAGATTCTTATGCTGCTGCTTATGGAGAGGATCTTCTCAAGGACTTGGATTCTGAACTGACAAGTGATTTTCAG : CGTGTGGTGCTTCTCTGGACTTTGAGTCCTGCTGAGCGCGACGCCTACTTGGTTAATGAGGCTACCAAACGTCTGACTGCTAGCAATTGGGTTATCATGGAAATTGCTTGTACCAGGTCTTCTGATGATCTTTTTAAGGCGAGGCAGGCCTACCATGCTCGATACAAGAAATCACTTGAAGAAGATGTTGCTTATCATACAAGTGGGGATTTCCGTAAG : CTTTTGGTTCCTCTTATAACTGCATTCAGATATGAAGGAGATGAGGTGAACATGACATTAGCAAGAAAGGAAGCAAATATACTGCATGAGAAGATCTCTGACAAGGCTTACAATGACGAGGAGATCATCCGAATCATTTCTACTAGGAGTAAAGCACAGCTGAGTGCTACGTTCAACCACTACAATGATCACCATGGCCATGAAATCATCAAG : GATCTGGAAGCTGATGATGACGATGAGTACCTGAAACTACTCAGAGCAGCAATAGAATGCTTGAAAACCCCAGAGAAACACTTTGAGAAAGTTCTTCGATTGGCTATCAAGAAGCTGGGTACAGACGAATGGGATCTTACTAGAGTTGTTGCCACTCGGGCTGAAGTTGACATGGAGCGTATCAAAGAAGAGTACCATAGGAGGAACAGTGTTACATTGGACCGTGCAATTGCTGGAGACACTTCAGGAGACTATGAAAAAATGCTTCTGGCTCTGATTGGGCACGGAGATGCTTGAATTACATGTGCTGAAACCTTAAGATAATAAAAAAAACTCTACTTATTTTCTGAAGTTTGAATTTGCTTTTATGATGTATGGTGTGTACTCTCAGAGTTTGGTTCTGTGTTTATATGAACTAAAAACACTCGGGAGTTGAGTTGTGTTTTGTTTTCGCCTTCACTTTTCATTTCGGACTTCTACTGGTTTTGCCTGCTAAATAAGCATAGCTTCAACTTTGGCTTGAACGGATCTTGTTTCTTTATAACTCAGAAATAGATTATGTATCTTGGTTCGT</gDNA_template>
            <first_frame> H  K  S  Y  V  T  L  Q  K  *  *  N  R  V  S  Q  *  L  L  R  W  Q  K  M  S  E  S  T  F  Y  V  P  T  Y  I  L  E  I  V  H  I  L  *  F  *  L  I  N  N  S  R  T  H  S  T  F  S  R  K  G  K  K  M  S  S  L  K  V  P  A  S  V  P  D  P  Y  E  D  A  E  Q  L  K  K  A  F  K   : G  W  G  T  N  E  E  L  I  I  Q  I  L  A  H  R  N  A  A  Q  R  K  L  I  R  D  S  Y  A  A  A  Y  G  E  D  L  L  K  D  L  D  S  E  L  T  S  D  F  Q  :  R  V  V  L  L  W  T  L  S  P  A  E  R  D  A  Y  L  V  N  E  A  T  K  R  L  T  A  S  N  W  V  I  M  E  I  A  C  T  R  S  S  D  D  L  F  K  A  R  Q  A  Y  H  A  R  Y  K  K  S  L  E  E  D  V  A  Y  H  T  S  G  D  F  R  K  :  L  L  V  P  L  I  T  A  F  R  Y  E  G  D  E  V  N  M  T  L  A  R  K  E  A  N  I  L  H  E  K  I  S  D  K  A  Y  N  D  E  E  I  I  R  I  I  S  T  R  S  K  A  Q  L  S  A  T  F  N  H  Y  N  D  H  H  G  H  E  I  I  K  :  D  L  E  A  D  D  D  D  E  Y  L  K  L  L  R  A  A  I  E  C  L  K  T  P  E  K  H  F  E  K  V  L  R  L  A  I  K  K  L  G  T  D  E  W  D  L  T  R  V  V  A  T  R  A  E  V  D  M  E  R  I  K  E  E  Y  H  R  R  N  S  V  T  L  D  R  A  I  A  G  D  T  S  G  D  Y  E  K  M  L  L  A  L  I  G  H  G  D  A  *  I  T  C  A  E  T  L  R  *  *  K  K  L  Y  L  F  S  E  V  *  I  C  F  Y  D  V  W  C  V  L  S  E  F  G  S  V  F  I  *  T  K  N  T  R  E  L  S  C  V  L  F  S  P  S  L  F  I  S  D  F  Y  W  F  C  L  L  N  K  H  S  F  N  F  G  L  N  G  S  C  F  F  I  T  Q  K  *  I  M  Y  L  G  S  </first_frame>
            <second_frame>  I  K  V  M  L  R  Y  K  N  N  K  I  V  Y  P  N  D  F  C  D  G  K  K  C  L  N  P  L  F  M  F  P  R  I  F  L  R  L  Y  I  Y  Y  S  F  D  S  *  I  I  Q  E  H  T  A  H  S  Q  E  R  E  K  K  C  L  V  L  K  F  Q  H  Q  F  Q  I  L  M  K  M  L  S  N  S  K  K  L  L  K  :  D  G  A  Q  M  R  N  L  L  F  R  F  W  L  I  G  M  Q  H  N  A  S  *  S  E  I  L  M  L  L  L  M  E  R  I  F  S  R  T  W  I  L  N  *  Q  V  I  F  S :   V  W  C  F  S  G  L  *  V  L  L  S  A  T  P  T  W  L  M  R  L  P  N  V  *  L  L  A  I  G  L  S  W  K  L  L  V  P  G  L  L  M  I  F  L  R  R  G  R  P  T  M  L  D  T  R  N  H  L  K  K  M  L  L  I  I  Q  V  G  I  S  V  S :   F  W  F  L  L  *  L  H  S  D  M  K  E  M  R  *  T  *  H  *  Q  E  R  K  Q  I  Y  C  M  R  R  S  L  T  R  L  T  M  T  R  R  S  S  E  S  F  L  L  G  V  K  H  S  *  V  L  R  S  T  T  T  M  I  T  M  A  M  K  S  S  R :   I  W  K  L  M  M  T  M  S  T  *  N  Y  S  E  Q  Q  *  N  A  *  K  P  Q  R  N  T  L  R  K  F  F  D  W  L  S  R  S  W  V  Q  T  N  G  I  L  L  E  L  L  P  L  G  L  K  L  T  W  S  V  S  K  K  S  T  I  G  G  T  V  L  H  W  T  V  Q  L  L  E  T  L  Q  E  T  M  K  K  C  F  W  L  *  L  G  T  E  M  L  E  L  H  V  L  K  P  *  D  N  K  K  N  S  T  Y  F  L  K  F  E  F  A  F  M  M  Y  G  V  Y  S  Q  S  L  V  L  C  L  Y  E  L  K  T  L  G  S  *  V  V  F  C  F  R  L  H  F  S  F  R  T  S  T  G  F  A  C  *  I  S  I  A  S  T  L  A  *  T  D  L  V  S  L  *  L  R  N  R  L  C  I  L  V  R </second_frame>
            <third_frame>   *  K  L  C  Y  V  T  K  I  I  K  S  C  I  P  M  T  F  A  M  A  K  N  V  *  I  H  F  L  C  S  H  V  Y  S  *  D  C  T  Y  T  I  V  L  T  H  K  *  F  K  N  T  Q  H  I  L  K  K  G  K  K  N  V  *  S  *  S  S  S  I  S  S  R  S  L  *  R  C  *  A  T  Q  K  S  F  *  R :   M  G  H  K  *  G  T  Y  Y  S  D  S  G  S  *  E  C  S  T  T  Q  V  N  P  R  F  L  C  C  C  L  W  R  G  S  S  Q  G  L  G  F  *  T  D  K  *  F  S   : A  C  G  A  S  L  D  F  E  S  C  *  A  R  R  L  L  G  *  *  G  Y  Q  T  S  D  C  *  Q  L  G  Y  H  G  N  C  L  Y  Q  V  F  *  *  S  F  *  G  E  A  G  L  P  C  S  I  Q  E  I  T  *  R  R  C  C  L  S  Y  K  W  G  F  P  *   : A  F  G  S  S  Y  N  C  I  Q  I  *  R  R  *  G  E  H  D  I  S  K  K  G  S  K  Y  T  A  *  E  D  L  *  Q  G  L  Q  *  R  G  D  H  P  N  H  F  Y  *  E  *  S  T  A  E  C  Y  V  Q  P  L  Q  *  S  P  W  P  *  N  H  Q   : G  S  G  S  *  *  *  R  *  V  P  E  T  T  Q  S  S  N  R  M  L  E  N  P  R  E  T  L  *  E  S  S  S  I  G  Y  Q  E  A  G  Y  R  R  M  G  S  Y  *  S  C  C  H  S  G  *  S  *  H  G  A  Y  Q  R  R  V  P  *  E  E  Q  C  Y  I  G  P  C  N  C  W  R  H  F  R  R  L  *  K  N  A  S  G  S  D  W  A  R  R  C  L  N  Y  M  C  *  N  L  K  I  I  K  K  T  L  L  I  F  *  S  L  N  L  L  L  *  C  M  V  C  T  L  R  V  W  F  C  V  Y  M  N  *  K  H  S  G  V  E  L  C  F  V  F  A  F  T  F  H  F  G  L  L  L  V  L  P  A  K  *  A  *  L  Q  L  W  L  E  R  I  L  F  L  Y  N  S  E  I  D  Y  V  S  W  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75189" stop="75063"/>
                    <exon start="73803" stop="73658"/>
                    <exon start="73448" stop="73230"/>
                    <exon start="72460" stop="72248"/>
                    <exon start="72159" stop="71863"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>999</number_coding_nucleotides>
                  <number_encoded_amino_acids>333</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LINNSRTHSTFSRKGKKMSSLKVPASVPDPYEDAEQLKKAFKGWGTNEELIIQILAHRNAAQRKLIRDSYAAAYGEDLLKDLDSELTSDFQRVVLLWTLSPAERDAYLVNEATKRLTASNWVIMEIACTRSSDDLFKARQAYHARYKKSLEEDVAYHTSGDFRKLLVPLITAFRYEGDEVNMTLARKEANILHEKISDKAYNDEEIIRIISTRSKAQLSATFNHYNDHHGHEIIKDLEADDDDEYLKLLRAAIECLKTPEKHFEKVLRLAIKKLGTDEWDLTRVVATRAEVDMERIKEEYHRRNSVTLDRAIAGDTSGDYEKMLLALIGHGDA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="79077" PGL_stop="83653"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79077" e_stop="79427"/>
            <exon e_start="80005" e_stop="80050"/>
            <exon e_start="80268" e_stop="80534"/>
            <exon e_start="80649" e_stop="80721"/>
            <exon e_start="81720" e_stop="81800"/>
            <exon e_start="81887" e_stop="81950"/>
            <exon e_start="82511" e_stop="82598"/>
            <exon e_start="83003" e_stop="83087"/>
            <exon e_start="83313" e_stop="83653"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.843" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.457" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.392" e_score="1.000"/>
          <exon-intron don_prob="0.770" acc_prob="0.890" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79077" e_stop="79427" e_length="351"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79428" i_stop="80004" i_length="577"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80005" e_stop="80050" e_length="46"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="80051" i_stop="80267" i_length="217"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80268" e_stop="80534" e_length="267"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="80535" i_stop="80648" i_length="114"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="80649" e_stop="80721" e_length="73"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="80722" i_stop="81719" i_length="998"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="81720" e_stop="81800" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.843" acc_prob="0.990">
            <gDNA_intron_boundary i_start="81801" i_stop="81886" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="81887" e_stop="81950" e_length="64"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.457">
            <gDNA_intron_boundary i_start="81951" i_stop="82510" i_length="560"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="82511" e_stop="82598" e_length="88"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.392">
            <gDNA_intron_boundary i_start="82599" i_stop="83002" i_length="404"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="83003" e_stop="83087" e_length="85"/>
          </exon>
          <intron i_serial="8" don_prob="0.770" acc_prob="0.890">
            <gDNA_intron_boundary i_start="83088" i_stop="83312" i_length="225"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="83313" e_stop="83653" e_length="341"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79077" stop="79427"/>
              <exon start="80005" stop="80050"/>
              <exon start="80268" stop="80534"/>
              <exon start="80649" stop="80721"/>
              <exon start="81720" stop="81800"/>
              <exon start="81887" stop="81950"/>
              <exon start="82511" stop="82598"/>
              <exon start="83003" stop="83087"/>
              <exon start="83313" stop="83653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322948" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTCTCCTAATATTCCACCCACTTTCCTTTTCCTTTTTAGGTATATTCTCAACTCTTTTTCACCATTAATGGCGTTTTAGAGCATCACAAACCCCAAAAAAGTAGTGGAATTTGTTGTTGTCATAAAGGAGAATACTACTTATAGCTTTTTAGAAGTAATGGGTAGTGAAAATCAACAGCAATTTGAAGAGAATCTTCTTCATAATCATAATCATCAGGAGCAGCAGCAGCAGCAGAGGAAGAACCGTTCTTTAAGGAGTAAAGCTGCGCACTTTGTATCGGATGTTGCTACTGTTATTCTTAACCCCATATCTGATAAACCCTTAAAGCCCAGACCACCACCTTTGCCT : GAAGATGGATCTGATTCTGACGGAAGTAAGCATGAGTCAAATGCAG : AGCTCTTCACCAAGTTGCTAGACTAGGCGGCTTTAGGAATCAGGGTTCGGCAAAGGGCAGCTCTGATATGGTGTTTGATGATGGAAGTAATTCTAAAGTTTCCGGAGATAATCAAATACCTTTGGAAGATATGAATAAGAAACCTCTTCTGAACAATCTTCCGGGAACTTCTGAGCCTTCAGTTCTCCTCACTGAGAAGGCACGAATTTCTCTTTATGCTGCACTGCCTGTGCTTGTGCAGGACAGGAAGTGGGTCTTGTTATACAG : TACATGGAAGAATGGAATATCACTCTCGACTTTATACAGGAGAAGCCTACTCTGGCCTGGCATCAGTCTGCTG : GTTGTGGGGGACCATAATGGTGCTGTGTTTGGTGGGCTAGTTGATGCACCTTTAAAGCCAACAACAAAGAGAAGATATCAG : GGTACAAACAATTCATTTGTTTTCTCAAATGTATCTGGCCAACCTGTCATATTTCGTCCCACAG : GTGTCAATCGCTATTTTACTGTCTGTTCCACGGAGTATTTAGCTTTGGGAGGCGGTGGCCATTTTGCTCTCTACTTAGACGGGGATCT : GCTAACAGGTTCAAGTGCAACATCAGAAACTTATGGAAATTCTTGTTTGGCACATACTGAAGACTTTGAAGTTAAGGAAGTTGAG : TTATGGGGCTTTGTATATGCTTCCAAGTATGAAGAGATGGTTTCGATTTTGCGAACAGAGACACCTGGAATTTGCCGCTGGTAAACACAGTGTTAAAGATGCTTGCTTTCCAGTCTAAATGATTGTTTCTGTTTGGTGCCCATGGTTGCGGACAGCACCACATGGAATGCAGGATAGGTTTTGTACATATGTTTTCACATGTTCAGCAACAATTTTACACTTGTATAGGTGTGTTTCTTTACATGTACAGTGAACCATTTTGATAAAATTCTCTTTGCTTCGGTAAATGAGAATGAACGTGAGAGCTAAATGAAAATATTCATTAAACTGTTCTCCAGAAA</gDNA_template>
            <first_frame> L  S  P  N  I  P  P  T  F  L  F  L  F  R  Y  I  L  N  S  F  S  P  L  M  A  F  *  S  I  T  N  P  K  K  V  V  E  F  V  V  V  I  K  E  N  T  T  Y  S  F  L  E  V  M  G  S  E  N  Q  Q  Q  F  E  E  N  L  L  H  N  H  N  H  Q  E  Q  Q  Q  Q  Q  R  K  N  R  S  L  R  S  K  A  A  H  F  V  S  D  V  A  T  V  I  L  N  P  I  S  D  K  P  L  K  P  R  P  P  P  L  P  :  E  D  G  S  D  S  D  G  S  K  H  E  S  N  A   : E  L  F  T  K  L  L  D  *  A  A  L  G  I  R  V  R  Q  R  A  A  L  I  W  C  L  M  M  E  V  I  L  K  F  P  E  I  I  K  Y  L  W  K  I  *  I  R  N  L  F  *  T  I  F  R  E  L  L  S  L  Q  F  S  S  L  R  R  H  E  F  L  F  M  L  H  C  L  C  L  C  R  T  G  S  G  S  C  Y  T   : V  H  G  R  M  E  Y  H  S  R  L  Y  T  G  E  A  Y  S  G  L  A  S  V  C  W :   L  W  G  T  I  M  V  L  C  L  V  G  *  L  M  H  L  *  S  Q  Q  Q  R  E  D  I  R :   V  Q  T  I  H  L  F  S  Q  M  Y  L  A  N  L  S  Y  F  V  P  Q  :  V  S  I  A  I  L  L  S  V  P  R  S  I  *  L  W  E  A  V  A  I  L  L  S  T  *  T  G  I   : C  *  Q  V  Q  V  Q  H  Q  K  L  M  E  I  L  V  W  H  I  L  K  T  L  K  L  R  K  L  S :   Y  G  A  L  Y  M  L  P  S  M  K  R  W  F  R  F  C  E  Q  R  H  L  E  F  A  A  G  K  H  S  V  K  D  A  C  F  P  V  *  M  I  V  S  V  W  C  P  W  L  R  T  A  P  H  G  M  Q  D  R  F  C  T  Y  V  F  T  C  S  A  T  I  L  H  L  Y  R  C  V  S  L  H  V  Q  *  T  I  L  I  K  F  S  L  L  R  *  M  R  M  N  V  R  A  K  *  K  Y  S  L  N  C  S  P  E  </first_frame>
            <second_frame>  F  L  L  I  F  H  P  L  S  F  S  F  L  G  I  F  S  T  L  F  H  H  *  W  R  F  R  A  S  Q  T  P  K  K  *  W  N  L  L  L  S  *  R  R  I  L  L  I  A  F  *  K  *  W  V  V  K  I  N  S  N  L  K  R  I  F  F  I  I  I  I  I  R  S  S  S  S  S  R  G  R  T  V  L  *  G  V  K  L  R  T  L  Y  R  M  L  L  L  L  F  L  T  P  Y  L  I  N  P  *  S  P  D  H  H  L  C  L :   K  M  D  L  I  L  T  E  V  S  M  S  Q  M  Q  :  S  S  S  P  S  C  *  T  R  R  L  *  E  S  G  F  G  K  G  Q  L  *  Y  G  V  *  *  W  K  *  F  *  S  F  R  R  *  S  N  T  F  G  R  Y  E  *  E  T  S  S  E  Q  S  S  G  N  F  *  A  F  S  S  P  H  *  E  G  T  N  F  S  L  C  C  T  A  C  A  C  A  G  Q  E  V  G  L  V  I  Q  :  Y  M  E  E  W  N  I  T  L  D  F  I  Q  E  K  P  T  L  A  W  H  Q  S  A   : G  C  G  G  P  *  W  C  C  V  W  W  A  S  *  C  T  F  K  A  N  N  K  E  K  I  S   : G  Y  K  Q  F  I  C  F  L  K  C  I  W  P  T  C  H  I  S  S  H  R :   C  Q  S  L  F  Y  C  L  F  H  G  V  F  S  F  G  R  R  W  P  F  C  S  L  L  R  R  G  S  :  A  N  R  F  K  C  N  I  R  N  L  W  K  F  L  F  G  T  Y  *  R  L  *  S  *  G  S  *   : V  M  G  L  C  I  C  F  Q  V  *  R  D  G  F  D  F  A  N  R  D  T  W  N  L  P  L  V  N  T  V  L  K  M  L  A  F  Q  S  K  *  L  F  L  F  G  A  H  G  C  G  Q  H  H  M  E  C  R  I  G  F  V  H  M  F  S  H  V  Q  Q  Q  F  Y  T  C  I  G  V  F  L  Y  M  Y  S  E  P  F  *  *  N  S  L  C  F  G  K  *  E  *  T  *  E  L  N  E  N  I  H  *  T  V  L  Q  K </second_frame>
            <third_frame>   F  S  *  Y  S  T  H  F  P  F  P  F  *  V  Y  S  Q  L  F  F  T  I  N  G  V  L  E  H  H  K  P  Q  K  S  S  G  I  C  C  C  H  K  G  E  Y  Y  L  *  L  F  R  S  N  G  *  *  K  S  T  A  I  *  R  E  S  S  S  *  S  *  S  S  G  A  A  A  A  A  E  E  E  P  F  F  K  E  *  S  C  A  L  C  I  G  C  C  Y  C  Y  S  *  P  H  I  *  *  T  L  K  A  Q  T  T  T  F  A   : *  R  W  I  *  F  *  R  K  *  A  *  V  K  C  R :   A  L  H  Q  V  A  R  L  G  G  F  R  N  Q  G  S  A  K  G  S  S  D  M  V  F  D  D  G  S  N  S  K  V  S  G  D  N  Q  I  P  L  E  D  M  N  K  K  P  L  L  N  N  L  P  G  T  S  E  P  S  V  L  L  T  E  K  A  R  I  S  L  Y  A  A  L  P  V  L  V  Q  D  R  K  W  V  L  L  Y  S :   T  W  K  N  G  I  S  L  S  T  L  Y  R  R  S  L  L  W  P  G  I  S  L  L  :  V  V  G  D  H  N  G  A  V  F  G  G  L  V  D  A  P  L  K  P  T  T  K  R  R  Y  Q  :  G  T  N  N  S  F  V  F  S  N  V  S  G  Q  P  V  I  F  R  P  T   : G  V  N  R  Y  F  T  V  C  S  T  E  Y  L  A  L  G  G  G  G  H  F  A  L  Y  L  D  G  D  L :   L  T  G  S  S  A  T  S  E  T  Y  G  N  S  C  L  A  H  T  E  D  F  E  V  K  E  V  E  :  L  W  G  F  V  Y  A  S  K  Y  E  E  M  V  S  I  L  R  T  E  T  P  G  I  C  R  W  *  T  Q  C  *  R  C  L  L  S  S  L  N  D  C  F  C  L  V  P  M  V  A  D  S  T  T  W  N  A  G  *  V  L  Y  I  C  F  H  M  F  S  N  N  F  T  L  V  *  V  C  F  F  T  C  T  V  N  H  F  D  K  I  L  F  A  S  V  N  E  N  E  R  E  S  *  M  K  I  F  I  K  L  F  S  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80040" stop="80050"/>
                    <exon start="80268" stop="80534"/>
                    <exon start="80649" stop="80721"/>
                    <exon start="81720" stop="81800"/>
                    <exon start="81887" stop="81950"/>
                    <exon start="82511" stop="82598"/>
                    <exon start="83003" stop="83087"/>
                    <exon start="83313" stop="83396"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>750</number_coding_nucleotides>
                  <number_encoded_amino_acids>250</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKCRALHQVARLGGFRNQGSAKGSSDMVFDDGSNSKVSGDNQIPLEDMNKKPLLNNLPGTSEPSVLLTEKARISLYAALPVLVQDRKWVLLYSTWKNGISLSTLYRRSLLWPGISLLVVGDHNGAVFGGLVDAPLKPTTKRRYQGTNNSFVFSNVSGQPVIFRPTGVNRYFTVCSTEYLALGGGGHFALYLDGDLLTGSSATSETYGNSCLAHTEDFEVKEVELWGFVYASKYEEMVSILRTETPGICRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="99746" PGL_stop="100572"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99746" e_stop="100572"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.908"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="99746" e_stop="100572" e_length="827"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99746" stop="100404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99815" stop="100572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100218" stop="100548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATGCGAGGAAGAGGATACTTGTTCTTAATCGTTACCTTATTTAGTTGTCTGTAATCTATGCACATCCTAAAACTTCCACCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGCAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCTATTGTATAAGGGGGTATAGAAATGGGGCCAATACCCGGTTCAAGATCAATGTAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCATGGACTACCGAAACTGACTCAATTGACGGTACTTGGGTAGTGTCATCCCTGAGGTGTGCCAAGAAAGCTAAACAACCCTTACTAACCATTCTCTTAGCACGAAGAAAGGAGATGATACGAACCGGGTTGGAAGTGTAGTTACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATAACAACATC</gDNA_template>
            <first_frame> S  M  R  G  R  G  Y  L  F  L  I  V  T  L  F  S  C  L  *  S  M  H  I  L  K  L  P  P  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  S  C  S  W  A  F  N  S  L  N  S  A  G  A  I  V  *  G  G  I  E  M  G  P  I  P  G  S  R  S  M  *  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  W  T  T  E  T  D  S  I  D  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  Q  P  L  L  T  I  L  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  L  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  V  T  R  P  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  N  S  Q  C  K  L  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  K  R  L  P  V  I  T  T   </first_frame>
            <second_frame>  Q  C  E  E  E  D  T  C  S  *  S  L  P  Y  L  V  V  C  N  L  C  T  S  *  N  F  H  P  S  S  S  Q  T  K  P  E  H  P  K  G  M  H  L  V  *  *  S  L  C  S  T  T  L  A  V  G  P  L  T  L  L  T  P  R  E  L  L  Y  K  G  V  *  K  W  G  Q  Y  P  V  Q  D  Q  C  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  L  P  K  L  T  Q  L  T  V  L  G  *  C  H  P  *  G  V  P  R  K  L  N  N  P  Y  *  P  F  S  *  H  E  E  R  R  *  Y  E  P  G  W  K  C  S  Y  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  Q  F  *  H  Y  N  P  R  L  Q  N  L  E  K  A  K  S  Y  P  E  L  H  R  S  Q  P  F  L  R  *  P  S  L  H  E  Y  C  S  P  Q  K  S  P  D  Q  T  Y  I  L  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  I  H  N  V  N  *  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  K  D  Y  L  *  *  Q  H  </second_frame>
            <third_frame>   N  A  R  K  R  I  L  V  L  N  R  Y  L  I  *  L  S  V  I  Y  A  H  P  K  T  S  T  L  L  L  H  K  Q  N  R  S  T  P  R  G  C  T  W  S  N  E  A  F  A  Q  Q  L  L  Q  L  G  L  *  L  S  *  L  R  G  S  Y  C  I  R  G  Y  R  N  G  A  N  T  R  F  K  I  N  V  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  M  D  Y  R  N  *  L  N  *  R  Y  L  G  S  V  I  P  E  V  C  Q  E  S  *  T  T  L  T  N  H  S  L  S  T  K  K  G  D  D  T  N  R  V  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  C  K  I  W  R  K  P  S  H  T  Q  N  Y  I  E  V  N  H  F  *  D  N  Q  V  Y  M  S  I  A  P  H  K  S  H  Q  T  R  P  I  Y  F  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  F  T  M  *  I  K  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  N  N  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99998" stop="100198"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSISLSGGIPGRSAGNTSRNSWTTETDSIDGTWVVSSLRCAKKAKQPLLTILLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="101238" PGL_stop="99798"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101238" e_stop="101065"/>
            <exon e_start="100325" e_stop="99798"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.891"/>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.891">
            <gDNA_exon_boundary e_start="101238" e_stop="101065" e_length="174"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="101064" i_stop="100326" i_length="739"/>
          </intron>
          <exon e_serial="2" e_score="0.905">
            <gDNA_exon_boundary e_start="100325" e_stop="99798" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101238" stop="101065"/>
              <exon start="100325" stop="99798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335938" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGGTAAGATGTCGGTTACTGCATATGAGGCTAAGTTTCGTGAACTTTCCAGATATGCCACTCAGCTTTGTTTCAGTCCATAAGAGCGGATTTGCCGTTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTTTAGCCTTATAGGTAGCGACTACGGCAAAATCCTTTCAAG : AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTAACTACACTTCCAACCCGGTTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGCACACCTCAGGGATGACACTACCCAAGTACCGTCAATTGAGTCAGTTTCGGTAGTCCATGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTACATTGATCTTGAACCGGGTATTGGCCCCATTTCTATACCCCCTTATACAATAGCTCCCGCGGAGTTAAGAGAGTTAAAGGCCCAACTGCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCCCCTTGGGGTGCTCCGGTTTTGTTTGTGAAGAAGAAGGGTGGAAGTTTTAGGATGTGCATAGATTACA</gDNA_template>
            <first_frame> A  R  *  D  V  G  Y  C  I  *  G  *  V  S  *  T  F  Q  I  C  H  S  A  L  F  Q  S  I  R  A  D  L  P  F  C  E  G  V  E  V  R  I  A  D  F  *  P  Y  R  *  R  L  R  Q  N  P  F  K  :  K  W  L  T  S  M  *  F  W  V  *  L  G  F  L  Q  I  L  Q  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  T  R  F  V  S  S  P  F  F  V  L  R  E  W  L  V  R  V  V  *  L  S  W  H  T  S  G  M  T  L  P  K  Y  R  Q  L  S  Q  F  R  *  S  M  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  T  L  I  L  N  R  V  L  A  P  F  L  Y  P  L  I  Q  *  L  P  R  S  *  E  S  *  R  P  N  C  K  S  C  *  A  K  A  S  L  D  Q  V  H  P  L  G  V  L  R  F  C  L  *  R  R  R  V  E  V  L  G  C  A  *  I  T </first_frame>
            <second_frame>  Q  G  K  M  S  V  T  A  Y  E  A  K  F  R  E  L  S  R  Y  A  T  Q  L  C  F  S  P  *  E  R  I  C  R  F  V  K  G  L  R  S  E  L  R  I  F  S  L  I  G  S  D  Y  G  K  I  L  S  R :   N  G  *  L  R  C  N  S  G  Y  D  L  A  F  S  K  F  C  N  L  G  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  P  G  S  Y  H  L  L  S  S  C  *  E  N  G  *  *  G  L  F  S  F  L  G  T  P  Q  G  *  H  Y  P  S  T  V  N  *  V  S  F  G  S  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  H  *  S  *  T  G  Y  W  P  H  F  Y  T  P  L  Y  N  S  S  R  G  V  K  R  V  K  G  P  T  A  R  V  V  E  Q  R  L  H  *  T  K  C  I  P  L  G  C  S  G  F  V  C  E  E  E  G  W  K  F  *  D  V  H  R  L   </second_frame>
            <third_frame>   K  V  R  C  R  L  L  H  M  R  L  S  F  V  N  F  P  D  M  P  L  S  F  V  S  V  H  K  S  G  F  A  V  L  *  R  G  *  G  Q  N  C  G  F  L  A  L  *  V  A  T  T  A  K  S  F  Q   : E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  N  Y  T  S  N  P  V  R  I  I  S  F  L  R  A  K  R  M  V  S  K  G  C  L  A  F  L  A  H  L  R  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  H  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  Y  I  D  L  E  P  G  I  G  P  I  S  I  P  P  Y  T  I  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  G  G  S  F  R  M  C  I  D  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101092" stop="101065"/>
                    <exon start="100325" stop="99799"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VATTAKSFQEMVDFDVILGMTWLSPNFAILDCNAKTVTLAKPGTDPLVWEGNYTSNPVRIISFLRAKRMVSKGCLAFLAHLRDDTTQVPSIESVSVVHEFLDVFPADLPGMPPDRDIDFYIDLEPGIGPISIPPYTIAPAELRELKAQLQELLSKGFIRPSASPWGAPVLFVKKKGGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="100518" e_stop="99858"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="100518" e_stop="99858" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100518" stop="99858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335936" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAAGTATATAGGTCTGGTCTGGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTAACTACACTTCCAACCCGGTTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGCACACCTCAGGGATGACACTACCCAAGTACCGTCAATTGAGTCAGTTTCGGTAGTCCATGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTACATTGATCTTGAACCGGGTATTGGCCCCATTTCTATACCCCCTTATACAATAGCTCCCGCGGAGTTAAGAGAGTTAAAGGCCCAACTGCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  G  S  T  F  S  Y  V  S  S  S  F  A  N  G  L  N  L  H  C  E  L  L  D  M  P  I  R  V  S  T  P  V  G  E  S  V  I  V  E  K  V  Y  R  S  G  L  V  T  F  V  G  S  N  T  H  V  D  L  V  I  L  E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  N  Y  T  S  N  P  V  R  I  I  S  F  L  R  A  K  R  M  V  S  K  G  C  L  A  F  L  A  H  L  R  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  H  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  Y  I  D  L  E  P  G  I  G  P  I  S  I  P  P  Y  T  I  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  </first_frame>
            <second_frame>  L  I  L  D  P  H  F  L  M  Y  L  P  H  L  L  M  V  L  I  Y  I  V  N  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  K  Y  I  G  L  V  W  *  L  L  W  G  A  I  L  M  *  T  W  L  S  *  K  W  L  T  S  M  *  F  W  V  *  L  G  F  L  Q  I  L  Q  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  T  R  F  V  S  S  P  F  F  V  L  R  E  W  L  V  R  V  V  *  L  S  W  H  T  S  G  M  T  L  P  K  Y  R  Q  L  S  Q  F  R  *  S  M  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  T  L  I  L  N  R  V  L  A  P  F  L  Y  P  L  I  Q  *  L  P  R  S  *  E  S  *  R  P  N  C  K  S  C  *  A  K  A  S  L  D  Q  V  H  P  L  G </second_frame>
            <third_frame>   *  S  W  I  H  I  F  L  C  I  F  L  I  C  *  W  S  *  F  T  L  *  I  A  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  S  I  *  V  W  S  G  D  F  C  G  E  Q  Y  S  C  R  L  G  Y  L  R  N  G  *  L  R  C  N  S  G  Y  D  L  A  F  S  K  F  C  N  L  G  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  P  G  S  Y  H  L  L  S  S  C  *  E  N  G  *  *  G  L  F  S  F  L  G  T  P  Q  G  *  H  Y  P  S  T  V  N  *  V  S  F  G  S  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  H  *  S  *  T  G  Y  W  P  H  F  Y  T  P  L  Y  N  S  S  R  G  V  K  R  V  K  G  P  T  A  R  V  V  E  Q  R  L  H  *  T  K  C  I  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100518" stop="99859"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDPGSTFSYVSSSFANGLNLHCELLDMPIRVSTPVGESVIVEKVYRSGLVTFVGSNTHVDLVILEMVDFDVILGMTWLSPNFAILDCNAKTVTLAKPGTDPLVWEGNYTSNPVRIISFLRAKRMVSKGCLAFLAHLRDDTTQVPSIESVSVVHEFLDVFPADLPGMPPDRDIDFYIDLEPGIGPISIPPYTIAPAELRELKAQLQELLSKGFIRPSASPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="101865" PGL_stop="101312"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101865" e_stop="101312"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="101865" e_stop="101312" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101865" stop="101312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGAAAGGGAAAATGAGCAAGTACAGAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTTGCTTATCTTAGCGGGCTATCTGATCAAGGCCAGACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGACTACTGTGGCTCCCTGCATGGATGCCTCATTGTAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCATACGATTTTCTGGTTGAGTTTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCGCATGTGGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</gDNA_template>
            <first_frame> T  *  P  I  W  Y  *  G  G  D  S  S  T  N  *  G  S  G  K  R  G  *  G  K  G  K  *  A  S  T  E  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  C  L  S  *  R  A  I  *  S  R  P  D  T  S  S  V  F  C  T  S  T  S  G  S  G  G  T  T  C  D  Y  C  G  S  L  H  G  C  L  I  V  N  R  H  I  S  S  S  D  Y  R  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  G  C  I  R  F  S  G  *  V  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  A  C  G  V  S  T  N  R  G  T  T  Y  D  L  G  I  I   </first_frame>
            <second_frame>  P  S  P  S  G  T  R  A  V  T  P  P  P  T  E  E  V  V  R  E  G  E  E  R  E  N  E  Q  V  Q  N  E  E  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  T  T  V  A  P  C  M  D  A  S  L  *  I  G  T  F  P  R  L  T  T  G  P  I  M  T  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  E  F  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  V  L  G  R  *  L  L  H  Q  L  R  K  W  *  E  R  V  R  K  G  K  M  S  K  Y  R  M  R  N  C  H  P  N  L  P  Q  R  *  S  I  R  F  L  L  I  L  A  G  Y  L  I  K  A  R  H  L  Q  C  F  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  P  H  C  K  *  A  H  F  L  V  *  L  Q  G  L  *  *  Q  M  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  R  M  H  T  I  F  W  L  S  F  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  L  *  L  I  S  F  K  G  T  P  K  C  G  G  G  R  M  W  S  V  N  Q  Q  R  H  H  L  *  L  G  H  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101600" stop="101313"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGTFPRLTTGPIMTNDQHELFSKFLKLKPPVFKGAESEDAYDFLVEFHELLHKMGIVERFGVEFVTYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101864" stop="101601"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSGTRAVTPPPTEEVVREGEERENEQVQNEELPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAPQAPEVQHATTVAPCMDASL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="102224" PGL_stop="101939"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102224" e_stop="101939"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="102224" e_stop="101939" e_length="286"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102224" stop="101939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCTTTCTTTCTTTTGTGTTATTACTTGGATCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACCGCGCCAACATCAACATCAGCAAGACAAGATGCATCTGAGCCAGCCACTGAGACTGTAG</gDNA_template>
            <first_frame> L  G  S  L  V  S  S  H  K  N  E  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  F  E  R  L  *  D  F  R  K  I  P  F  F  L  S  F  F  C  V  I  T  W  I  Q  L  V  S  R  *  Y  K  L  V  S  D  H  L  H  S  I  S  Q  M  V  R  T  R  A  T  T  A  P  T  S  T  S  A  R  Q  D  A  S  E  P  A  T  E  T  V  </first_frame>
            <second_frame>  *  V  R  W  S  H  H  T  R  T  S  L  V  E  S  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  F  L  S  F  V  L  L  L  G  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  R  P  R  Q  H  Q  H  Q  Q  D  K  M  H  L  S  Q  P  L  R  L  * </second_frame>
            <third_frame>   R  F  V  G  L  I  T  Q  E  R  V  *  *  S  L  K  E  R  *  G  D  A  F  T  F  L  *  E  A  I  R  L  *  E  N  S  I  L  S  F  F  L  L  C  Y  Y  L  D  P  I  G  I  *  V  I  Q  I  G  I  *  P  S  S  L  Y  F  A  D  G  *  N  *  S  N  D  R  A  N  I  N  I  S  K  T  R  C  I  *  A  S  H  *  D  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102175" stop="101939"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGRLYFSLRGYKTLGKFHSFFLSFVLLLGSNWYLGDTNWYLTIFTLFRRWLELEQRPRQHQHQQDKMHLSQPLRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="129073" PGL_stop="109504"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129073" e_stop="128928"/>
            <exon e_start="123024" e_stop="122886"/>
            <exon e_start="121887" e_stop="121792"/>
            <exon e_start="121603" e_stop="121462"/>
            <exon e_start="115151" e_stop="115056"/>
            <exon e_start="114080" e_stop="113986"/>
            <exon e_start="113039" e_stop="112878"/>
            <exon e_start="112071" e_stop="111991"/>
            <exon e_start="111892" e_stop="111671"/>
            <exon e_start="111554" e_stop="111420"/>
            <exon e_start="110681" e_stop="110601"/>
            <exon e_start="110294" e_stop="110208"/>
            <exon e_start="110112" e_stop="110005"/>
            <exon e_start="109836" e_stop="109504"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="0.993"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.639" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.436" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.467" acc_prob="0.829" e_score="1.000"/>
          <exon-intron don_prob="0.888" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.920" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="129073" e_stop="128928" e_length="146"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="128927" i_stop="123025" i_length="5903"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="123024" e_stop="122886" e_length="139"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="122885" i_stop="121888" i_length="998"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="121887" e_stop="121792" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.949" acc_prob="0.993">
            <gDNA_intron_boundary i_start="121791" i_stop="121604" i_length="188"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="121603" e_stop="121462" e_length="142"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.997">
            <gDNA_intron_boundary i_start="121461" i_stop="115152" i_length="6310"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="115151" e_stop="115056" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.988" acc_prob="0.997">
            <gDNA_intron_boundary i_start="115055" i_stop="114081" i_length="975"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="114080" e_stop="113986" e_length="95"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.996">
            <gDNA_intron_boundary i_start="113985" i_stop="113040" i_length="946"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="113039" e_stop="112878" e_length="162"/>
          </exon>
          <intron i_serial="7" don_prob="0.639" acc_prob="1.000">
            <gDNA_intron_boundary i_start="112877" i_stop="112072" i_length="806"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="112071" e_stop="111991" e_length="81"/>
          </exon>
          <intron i_serial="8" don_prob="0.436" acc_prob="0.996">
            <gDNA_intron_boundary i_start="111990" i_stop="111893" i_length="98"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="111892" e_stop="111671" e_length="222"/>
          </exon>
          <intron i_serial="9" don_prob="0.467" acc_prob="0.829">
            <gDNA_intron_boundary i_start="111670" i_stop="111555" i_length="116"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="111554" e_stop="111420" e_length="135"/>
          </exon>
          <intron i_serial="10" don_prob="0.888" acc_prob="0.998">
            <gDNA_intron_boundary i_start="111419" i_stop="110682" i_length="738"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="110681" e_stop="110601" e_length="81"/>
          </exon>
          <intron i_serial="11" don_prob="1.000" acc_prob="0.928">
            <gDNA_intron_boundary i_start="110600" i_stop="110295" i_length="306"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="110294" e_stop="110208" e_length="87"/>
          </exon>
          <intron i_serial="12" don_prob="0.920" acc_prob="0.985">
            <gDNA_intron_boundary i_start="110207" i_stop="110113" i_length="95"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="110112" e_stop="110005" e_length="108"/>
          </exon>
          <intron i_serial="13" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="110004" i_stop="109837" i_length="168"/>
          </intron>
          <exon e_serial="14" e_score="0.976">
            <gDNA_exon_boundary e_start="109836" e_stop="109504" e_length="333"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129073" stop="128928"/>
              <exon start="123024" stop="122886"/>
              <exon start="121887" stop="121792"/>
              <exon start="121603" stop="121462"/>
              <exon start="115151" stop="115056"/>
              <exon start="114080" stop="113986"/>
              <exon start="113039" stop="112878"/>
              <exon start="112071" stop="111991"/>
              <exon start="111892" stop="111671"/>
              <exon start="111554" stop="111420"/>
              <exon start="110681" stop="110601"/>
              <exon start="110294" stop="110208"/>
              <exon start="110112" stop="110005"/>
              <exon start="109836" stop="109504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325575" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTAACCAGTAACCGCAATCACTTTTTCTTCATTTCAGAAGAAGCGAGAAAAAAAAATTGCGGACAATGTGTGGAATACTTGCAATTTTCGGTTGCACTGATAATTCTCATGCCAAGCGTTCAAGAGTAATCGAACTATCAAGAAG : GTTGCGCCATAGAGGACCTGACTGGAGTGGACTGCATAGCCATGAGGACTGTTACCTTGCTCATCAACGATTGGCAATAGTAGACCCAACTTCAGGAGATCAACCGTTGTATAATGAGGACAAGACCATTGTTGTTGCG : GTAAATGGAGAGATCTACAACCATAAGGAATTACGGGAGAAACTGAAGTCCCATCAGTTTCGAACTGAAAGTGATTGTGAAGTTATTGCCCATCTT : TATGAAGAATATGGAGAAAACTTCGTTGACATGTTGGATGGGATGTTCTCTTTTGTTCTTCTTGATACCCGGGATAAAAGTTTCATCGCTGCTCGGGATGCCATTGGCATTACACCCCTTTATATGGGGTGGGGTCTTGATG : GATCCATATGGTTTTCCTCGGAGATGAAAGCCTTAAGTGATGATTGTGAACGATTTGTTAGCTTCCTTCCCGGTCATATTTATTCAAGCAAAAATG : GAGGACTTAGAAGATGGTACAACCCACCATGGTTTTCGGAAACCATTCCTTCTACTCCATATGATCCCCTTGTCTTACGGAAGGCTTTTGAGAAG : GCTGTAGTTAAGAGACTCATGACGGATGTACCATTTGGTGTGCTTCTCTCTGGCGGACTGGATTCTTCACTTGTTGCTGCAGTGGCTAGCCGCTATTTGGCTGATACAGATGCCGGTCGACAATGGGGATCCCAGTTGCATACGTTTTGCGTAGGCTTGAAG : GGTTCTCCTGATCTGAAAGCTGCCAGAGAGGTGGCAGACTACATTGGAACTCGTCACCATGAGTTTCACTTTACAGTGCAG : GAAGGAATTGATGCCTTAGAGGAAGTCATATATCATGTTGAAACATATGATGTGACCACTATCAGAGCCAGTACACCAATGTTTCTCATGTCTCGGAAGATAAAGTCATTGGGTGTGAAAATGGTTTTATCAGGTGAAGGTTCTGATGAAATTTTTGGTGGTTATTTATATTTCCACAAGGCACCCAACAAAGAGGAGTTTCACCAAGAAACTTGTAGAAAG : ATTAAAGCACTTCATCTTTATGATTGCTTGAGGGCCAATAAATCTACTTCAGCTTGGGGTGTTGAAGCTCGTGTACCTTTCTTGGATAAAGAATTCATCAATATTGCAATGAACATTGATCCGGAATGGAAAATG : ATCCGACCTGACCTCGGAAGAATAGAAAAGTGGGTTGTACGTAATGCTTTTGACGATGATCAGAATCCTTATCTGCCAAAG : CATATTTTGTATAGGCAGAAGGAACAGTTCAGTGATGGAGTTGGCTACAGTTGGATTGATGGCTTGAAGGATCACGCAAACAGTCAA : GTTTCTGATTCTATGTTAGCGAATGCAAGTTTTGTTTACCCTCATAACACACCCACAACCAAGGAAGGGTACTACTATAGAACTATTTTCGAGCGATATTTCCCCAAG : GCTGCTGCAAGAGAAACTGTTCCTGGTGGTCCAAGTGTGGCCTGCAGCACTGCAAAAGCAGTAGAATGGGATGCCGCTTGGTCCAAGAATCTAGATCCATCCGGTCGAGCTGCTCTCGGTGTTCATGAAGCTGCTTATGAGGTTAAAGAACTATGAAGTTGATAAAGCTGTAGTAGCTGTTTGATTGTATATCTTCATTCAAAAACCTGACTTGTTCCACATTTGACTTCTTTTACGAGTTTGAATTCTTTGCTTCTGGTTTTACAATTACCAAAGTTTATTCTACTTGAGAAGAAATATGACGAATATGTGTTATTCATGACATGAAAGCAA</gDNA_template>
            <first_frame> C  N  Q  *  P  Q  S  L  F  L  H  F  R  R  S  E  K  K  K  L  R  T  M  C  G  I  L  A  I  F  G  C  T  D  N  S  H  A  K  R  S  R  V  I  E  L  S  R  R :   L  R  H  R  G  P  D  W  S  G  L  H  S  H  E  D  C  Y  L  A  H  Q  R  L  A  I  V  D  P  T  S  G  D  Q  P  L  Y  N  E  D  K  T  I  V  V  A  :  V  N  G  E  I  Y  N  H  K  E  L  R  E  K  L  K  S  H  Q  F  R  T  E  S  D  C  E  V  I  A  H  L  :  Y  E  E  Y  G  E  N  F  V  D  M  L  D  G  M  F  S  F  V  L  L  D  T  R  D  K  S  F  I  A  A  R  D  A  I  G  I  T  P  L  Y  M  G  W  G  L  D   : G  S  I  W  F  S  S  E  M  K  A  L  S  D  D  C  E  R  F  V  S  F  L  P  G  H  I  Y  S  S  K  N   : G  G  L  R  R  W  Y  N  P  P  W  F  S  E  T  I  P  S  T  P  Y  D  P  L  V  L  R  K  A  F  E  K  :  A  V  V  K  R  L  M  T  D  V  P  F  G  V  L  L  S  G  G  L  D  S  S  L  V  A  A  V  A  S  R  Y  L  A  D  T  D  A  G  R  Q  W  G  S  Q  L  H  T  F  C  V  G  L  K  :  G  S  P  D  L  K  A  A  R  E  V  A  D  Y  I  G  T  R  H  H  E  F  H  F  T  V  Q  :  E  G  I  D  A  L  E  E  V  I  Y  H  V  E  T  Y  D  V  T  T  I  R  A  S  T  P  M  F  L  M  S  R  K  I  K  S  L  G  V  K  M  V  L  S  G  E  G  S  D  E  I  F  G  G  Y  L  Y  F  H  K  A  P  N  K  E  E  F  H  Q  E  T  C  R  K  :  I  K  A  L  H  L  Y  D  C  L  R  A  N  K  S  T  S  A  W  G  V  E  A  R  V  P  F  L  D  K  E  F  I  N  I  A  M  N  I  D  P  E  W  K  M  :  I  R  P  D  L  G  R  I  E  K  W  V  V  R  N  A  F  D  D  D  Q  N  P  Y  L  P  K  :  H  I  L  Y  R  Q  K  E  Q  F  S  D  G  V  G  Y  S  W  I  D  G  L  K  D  H  A  N  S  Q  :  V  S  D  S  M  L  A  N  A  S  F  V  Y  P  H  N  T  P  T  T  K  E  G  Y  Y  Y  R  T  I  F  E  R  Y  F  P  K  :  A  A  A  R  E  T  V  P  G  G  P  S  V  A  C  S  T  A  K  A  V  E  W  D  A  A  W  S  K  N  L  D  P  S  G  R  A  A  L  G  V  H  E  A  A  Y  E  V  K  E  L  *  S  *  *  S  C  S  S  C  L  I  V  Y  L  H  S  K  T  *  L  V  P  H  L  T  S  F  T  S  L  N  S  L  L  L  V  L  Q  L  P  K  F  I  L  L  E  K  K  Y  D  E  Y  V  L  F  M  T  *  K  Q </first_frame>
            <second_frame>  V  T  S  N  R  N  H  F  F  F  I  S  E  E  A  R  K  K  N  C  G  Q  C  V  E  Y  L  Q  F  S  V  A  L  I  I  L  M  P  S  V  Q  E  *  S  N  Y  Q  E   : G  C  A  I  E  D  L  T  G  V  D  C  I  A  M  R  T  V  T  L  L  I  N  D  W  Q  *  *  T  Q  L  Q  E  I  N  R  C  I  M  R  T  R  P  L  L  L  R :   *  M  E  R  S  T  T  I  R  N  Y  G  R  N  *  S  P  I  S  F  E  L  K  V  I  V  K  L  L  P  I  F :   M  K  N  M  E  K  T  S  L  T  C  W  M  G  C  S  L  L  F  F  L  I  P  G  I  K  V  S  S  L  L  G  M  P  L  A  L  H  P  F  I  W  G  G  V  L  M  :  D  P  Y  G  F  P  R  R  *  K  P  *  V  M  I  V  N  D  L  L  A  S  F  P  V  I  F  I  Q  A  K  M  :  E  D  L  E  D  G  T  T  H  H  G  F  R  K  P  F  L  L  L  H  M  I  P  L  S  Y  G  R  L  L  R  R :   L  *  L  R  D  S  *  R  M  Y  H  L  V  C  F  S  L  A  D  W  I  L  H  L  L  L  Q  W  L  A  A  I  W  L  I  Q  M  P  V  D  N  G  D  P  S  C  I  R  F  A  *  A  *  R :   V  L  L  I  *  K  L  P  E  R  W  Q  T  T  L  E  L  V  T  M  S  F  T  L  Q  C  R :   K  E  L  M  P  *  R  K  S  Y  I  M  L  K  H  M  M  *  P  L  S  E  P  V  H  Q  C  F  S  C  L  G  R  *  S  H  W  V  *  K  W  F  Y  Q  V  K  V  L  M  K  F  L  V  V  I  Y  I  S  T  R  H  P  T  K  R  S  F  T  K  K  L  V  E  R :   L  K  H  F  I  F  M  I  A  *  G  P  I  N  L  L  Q  L  G  V  L  K  L  V  Y  L  S  W  I  K  N  S  S  I  L  Q  *  T  L  I  R  N  G  K  * :   S  D  L  T  S  E  E  *  K  S  G  L  Y  V  M  L  L  T  M  I  R  I  L  I  C  Q  S :   I  F  C  I  G  R  R  N  S  S  V  M  E  L  A  T  V  G  L  M  A  *  R  I  T  Q  T  V  K :   F  L  I  L  C  *  R  M  Q  V  L  F  T  L  I  T  H  P  Q  P  R  K  G  T  T  I  E  L  F  S  S  D  I  S  P  R :   L  L  Q  E  K  L  F  L  V  V  Q  V  W  P  A  A  L  Q  K  Q  *  N  G  M  P  L  G  P  R  I  *  I  H  P  V  E  L  L  S  V  F  M  K  L  L  M  R  L  K  N  Y  E  V  D  K  A  V  V  A  V  *  L  Y  I  F  I  Q  K  P  D  L  F  H  I  *  L  L  L  R  V  *  I  L  C  F  W  F  Y  N  Y  Q  S  L  F  Y  L  R  R  N  M  T  N  M  C  Y  S  *  H  E  S   </second_frame>
            <third_frame>   *  P  V  T  A  I  T  F  S  S  F  Q  K  K  R  E  K  K  I  A  D  N  V  W  N  T  C  N  F  R  L  H  *  *  F  S  C  Q  A  F  K  S  N  R  T  I  K  K  :  V  A  P  *  R  T  *  L  E  W  T  A  *  P  *  G  L  L  P  C  S  S  T  I  G  N  S  R  P  N  F  R  R  S  T  V  V  *  *  G  Q  D  H  C  C  C   : G  K  W  R  D  L  Q  P  *  G  I  T  G  E  T  E  V  P  S  V  S  N  *  K  *  L  *  S  Y  C  P  S   : L  *  R  I  W  R  K  L  R  *  H  V  G  W  D  V  L  F  C  S  S  *  Y  P  G  *  K  F  H  R  C  S  G  C  H  W  H  Y  T  P  L  Y  G  V  G  S  *  W :   I  H  M  V  F  L  G  D  E  S  L  K  *  *  L  *  T  I  C  *  L  P  S  R  S  Y  L  F  K  Q  K  W :   R  T  *  K  M  V  Q  P  T  M  V  F  G  N  H  S  F  Y  S  I  *  S  P  C  L  T  E  G  F  *  E   : G  C  S  *  E  T  H  D  G  C  T  I  W  C  A  S  L  W  R  T  G  F  F  T  C  C  C  S  G  *  P  L  F  G  *  Y  R  C  R  S  T  M  G  I  P  V  A  Y  V  L  R  R  L  E   : G  F  S  *  S  E  S  C  Q  R  G  G  R  L  H  W  N  S  S  P  *  V  S  L  Y  S  A   : G  R  N  *  C  L  R  G  S  H  I  S  C  *  N  I  *  C  D  H  Y  Q  S  Q  Y  T  N  V  S  H  V  S  E  D  K  V  I  G  C  E  N  G  F  I  R  *  R  F  *  *  N  F  W  W  L  F  I  F  P  Q  G  T  Q  Q  R  G  V  S  P  R  N  L  *  K   : D  *  S  T  S  S  L  *  L  L  E  G  Q  *  I  Y  F  S  L  G  C  *  S  S  C  T  F  L  G  *  R  I  H  Q  Y  C  N  E  H  *  S  G  M  E  N   : D  P  T  *  P  R  K  N  R  K  V  G  C  T  *  C  F  *  R  *  S  E  S  L  S  A  K   : A  Y  F  V  *  A  E  G  T  V  Q  *  W  S  W  L  Q  L  D  *  W  L  E  G  S  R  K  Q  S   : S  F  *  F  Y  V  S  E  C  K  F  C  L  P  S  *  H  T  H  N  Q  G  R  V  L  L  *  N  Y  F  R  A  I  F  P  Q   : G  C  C  K  R  N  C  S  W  W  S  K  C  G  L  Q  H  C  K  S  S  R  M  G  C  R  L  V  Q  E  S  R  S  I  R  S  S  C  S  R  C  S  *  S  C  L  *  G  *  R  T  M  K  L  I  K  L  *  *  L  F  D  C  I  S  S  F  K  N  L  T  C  S  T  F  D  F  F  Y  E  F  E  F  F  A  S  G  F  T  I  T  K  V  Y  S  T  *  E  E  I  *  R  I  C  V  I  H  D  M  K  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04HBa0077O05.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129061" stop="128928"/>
                    <exon start="123024" stop="122886"/>
                    <exon start="121887" stop="121792"/>
                    <exon start="121603" stop="121462"/>
                    <exon start="115151" stop="115056"/>
                    <exon start="114080" stop="113986"/>
                    <exon start="113039" stop="112878"/>
                    <exon start="112071" stop="111991"/>
                    <exon start="111892" stop="111671"/>
                    <exon start="111554" stop="111420"/>
                    <exon start="110681" stop="110601"/>
                    <exon start="110294" stop="110208"/>
                    <exon start="110112" stop="110005"/>
                    <exon start="109836" stop="109681"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1731</number_coding_nucleotides>
                  <number_encoded_amino_acids>577</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PQSLFLHFRRSEKKKLRTMCGILAIFGCTDNSHAKRSRVIELSRRLRHRGPDWSGLHSHEDCYLAHQRLAIVDPTSGDQPLYNEDKTIVVAVNGEIYNHKELREKLKSHQFRTESDCEVIAHLYEEYGENFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYMGWGLDGSIWFSSEMKALSDDCERFVSFLPGHIYSSKNGGLRRWYNPPWFSETIPSTPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADTDAGRQWGSQLHTFCVGLKGSPDLKAAREVADYIGTRHHEFHFTVQEGIDALEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINIAMNIDPEWKMIRPDLGRIEKWVVRNAFDDDQNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANSQVSDSMLANASFVYPHNTPTTKEGYYYRTIFERYFPKAAARETVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHEAAYEVKEL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 60 chains have been computed
$ 
$ memory statistics:
$ 32664 bytes spliced alignments in total
$ 15 spliced alignments have been stored
$ 2177 bytes was the average size of a spliced alignment
$ 19768 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1647 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 73 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-04 11:40:44
-->
