SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 290 19.4 2.8 0.0 C04HBa0020F17.1 2645 2716 (125745) C Copia00151 Copia (2453) 8308 8235 1 253 22.1 0.0 9.5 C04HBa0020F17.1 3379 3483 (124978) + Copia00053 Copia 4977 5071 (2) 2 296 13.8 0.0 3.3 C04HBa0020F17.1 3417 3476 (124985) C Copia00063 Copia (3767) 149 92 3 * 3328 18.4 2.6 5.0 C04HBa0020F17.1 3470 4496 (123965) C Copia00013 Copia (0) 5110 2938 4 278 24.2 5.0 2.0 C04HBa0020F17.1 5323 5423 (123038) C SIMPLEHAT2 Unknown (0) 1208 1105 5 259 23.7 9.2 4.3 C04HBa0020F17.1 6049 6189 (122272) C HAT1_MT Unknown (4441) 148 1 6 228 32.0 4.8 1.0 C04HBa0020F17.1 6321 6424 (122037) C Copia00124 Copia (4445) 825 718 7 432 16.7 13.3 10.0 C04HBa0020F17.1 6971 7150 (121311) C Copia00063 Copia (3722) 194 9 8 43938 0.0 0.0 0.0 C04HBa0020F17.1 9821 14642 (113819) + Copia00192 Copia 1 4822 (0) 9 1872 14.6 3.9 0.9 C04HBa0020F17.1 16168 16499 (111962) C Unknown00034 Unknown (5046) 4031 3690 10 361 26.2 7.5 0.0 C04HBa0020F17.1 16516 16622 (111839) + TLP2 Unknown 14 128 (178) 11 * 558 27.9 0.7 0.2 C04HBa0020F17.1 16527 16685 (111776) C TLP2 Unknown (41) 2808 125 12 346 26.2 5.8 1.4 C04HBa0020F17.1 17283 17468 (110993) C TLP2 Unknown (80) 239 42 13 779 27.0 5.8 4.0 C04HBa0020F17.1 19440 19713 (108748) + TLP1 Unknown 15 293 (369) 14 228 19.8 14.6 0.0 C04HBa0020F17.1 20346 20441 (108020) + ATHPOGO Unknown 1787 1896 (218) 15 353 22.4 9.2 4.3 C04HBa0020F17.1 21538 21700 (106761) C Unknown00024 Unknown (1099) 2220 2050 16 * 44598 0.0 0.0 0.0 C04HBa0020F17.1 21626 26527 (101934) + Copia00193 Copia 1 4902 (0) 17 365 6.0 1.2 1.2 C04HBa0020F17.1 43551 43634 (84827) + HELITRON7_OS Unknown 1588 1671 (8482) 18 328 5.6 0.0 0.0 C04HBa0020F17.1 43573 43644 (84817) + Gypsy00046 Gypsy 4106 4177 (6894) 19 * 8806 9.3 1.2 0.9 C04HBa0020F17.1 45922 47200 (81261) C Gypsy00196 Gypsy (3418) 1284 3 20 * 46320 15.7 4.7 2.9 C04HBa0020F17.1 46096 54815 (73646) + Gypsy00073 Gypsy 2970 11848 (236) 21 49241 7.0 0.5 0.8 C04HBa0020F17.1 47573 53983 (74478) C Gypsy00064 Gypsy (0) 6394 2 22 365 25.9 0.0 0.0 C04HBa0020F17.1 57028 57143 (71318) C ATHPOGON3 Unknown (1) 711 596 23 * 1433 23.1 4.0 2.6 C04HBa0020F17.1 57136 57565 (70896) C ATHPOGO Unknown (141) 1973 1538 24 1385 12.0 1.4 3.3 C04HBa0020F17.1 57677 57952 (70509) + Gypsy00122 Gypsy 363 633 (5285) 25 * 5350 12.9 3.6 2.2 C04HBa0020F17.1 57707 58689 (69772) C Gypsy00014 Gypsy (752) 6170 5175 26 390 17.9 0.0 0.0 C04HBa0020F17.1 60061 60166 (68295) C ATHPOGON1 Unknown (431) 107 2 27 9436 14.7 2.8 1.5 C04HBa0020F17.1 62730 64469 (63992) C Unknown00031 Unknown (3347) 1764 2 28 11467 15.5 4.0 2.8 C04HBa0020F17.1 63282 63730 (64731) + Gypsy00059 Gypsy 659 1743 (6650) 29 5129 10.9 2.9 0.8 C04HBa0020F17.1 63731 64521 (63940) + Unknown00050 Unknown 3975 4782 (849) 30 11467 15.5 4.0 2.8 C04HBa0020F17.1 64522 66711 (61750) + Gypsy00059 Gypsy 1744 7041 (1352) 29 5680 13.1 2.5 1.2 C04HBa0020F17.1 66712 67683 (60778) + Copia00089 Copia 9024 10007 (1449) 31 1947 31.4 2.6 5.5 C04HBa0020F17.1 67200 68521 (59940) C Copia00033 Copia (1914) 2523 1240 32 1327 32.0 3.8 1.5 C04HBa0020F17.1 68108 68382 (60079) + TONT2-I_PV Unknown 3364 3861 (809) 33 * 1834 13.8 1.4 0.0 C04HBa0020F17.1 68383 68671 (59790) + Copia00089 Copia 9999 10291 (1165) 34 1327 32.0 3.8 1.5 C04HBa0020F17.1 68672 68767 (59694) + TONT2-I_PV Unknown 3862 4034 (636) 33 2704 19.7 5.5 3.0 C04HBa0020F17.1 68856 69594 (58867) + Copia00089 Copia 10287 11044 (412) 35 428 12.5 4.5 1.1 C04HBa0020F17.1 69593 69681 (58780) + Copia00089 Copia 7025 7116 (4340) 36 * 1727 17.7 0.0 1.3 C04HBa0020F17.1 75500 75814 (52647) C Unknown00046 Unknown (7201) 2843 2533 37 582 17.6 7.2 9.7 C04HBa0020F17.1 76153 76359 (52102) + Gypsy00043 Gypsy 12841 13042 (852) 38 384 9.1 6.7 1.1 C04HBa0020F17.1 77864 77952 (50509) + Unknown00020 Unknown 4299 4392 (813) 39 226 7.8 0.0 0.0 C04HBa0020F17.1 77951 78001 (50460) + ATHILA7_I Unknown 6328 6378 (3610) 40 * 515 21.2 9.1 8.3 C04HBa0020F17.1 78050 78291 (50170) + Gypsy00043 Gypsy 1800 2043 (11851) 41 444 17.8 0.0 4.7 C04HBa0020F17.1 80395 80500 (47961) + Gypsy00043 Gypsy 3887 3987 (9907) 41 309 15.0 7.7 12.1 C04HBa0020F17.1 80724 80814 (47647) + Gypsy00043 Gypsy 4181 4267 (9627) 41 6443 32.5 2.1 1.9 C04HBa0020F17.1 80936 83862 (44599) C Gypsy00049 Gypsy (3500) 11030 8097 42 7395 28.9 1.0 0.7 C04HBa0020F17.1 81003 83251 (45210) + Gypsy00043 Gypsy 4752 7006 (6888) 43 2802 33.7 6.3 5.3 C04HBa0020F17.1 84529 87194 (41267) + Gypsy00043 Gypsy 7275 9967 (3927) 43 312 14.7 10.3 3.9 C04HBa0020F17.1 88010 88087 (40374) + Gypsy00043 Gypsy 10639 10721 (3173) 44 10912 13.2 2.2 2.6 C04HBa0020F17.1 89135 91111 (37350) + Gypsy00078 Gypsy 3070 5037 (3070) 45 1131 25.6 5.6 9.5 C04HBa0020F17.1 93031 93726 (34735) + Gypsy00043 Gypsy 12382 13050 (844) 46 665 17.6 13.7 6.0 C04HBa0020F17.1 95051 95298 (33163) + Unknown00020 Unknown 4121 4387 (818) 47 48835 3.2 0.6 0.8 C04HBa0020F17.1 95897 103650 (24811) + Gypsy00189 Gypsy 1 7681 (0) 48 295 12.5 1.1 0.0 C04HBa0020F17.1 104901 104913 (23548) + Gypsy00046 Gypsy 4079 4165 (6904) 49 391 4.1 0.0 0.0 C04HBa0020F17.1 104914 104986 (23475) C HELITRON7_OS Unknown (8499) 1654 1582 50 252 21.7 0.0 0.0 C04HBa0020F17.1 104930 104998 (23463) C Gypsy00042 Gypsy (1391) 6107 6039 51 * 262 27.6 3.8 7.5 C04HBa0020F17.1 107106 107238 (21223) + Copia00153 Copia 4361 4488 (2901) 52 252 24.2 0.0 1.6 C04HBa0020F17.1 107458 107520 (20941) + Gypsy00077 Gypsy 5670 5731 (382) 53 246 8.4 1.3 7.8 C04HBa0020F17.1 107654 107730 (20731) + MuDR1_HV Unknown 1236 1307 (5153) 54 * 9726 24.1 3.0 2.2 C04HBa0020F17.1 107726 110415 (18046) + Gypsy00170 Gypsy 502 3213 (5193) 55 315 31.0 1.0 1.0 C04HBa0020F17.1 111685 111872 (16589) C METRAHAT Unknown (699) 3355 2684 56 245 28.9 0.0 6.8 C04HBa0020F17.1 112181 112312 (16149) C METRAHAT Unknown (1380) 2875 2530 57 235 19.1 0.0 2.1 C04HBa0020F17.1 112567 112614 (15847) C ATHAT3 Unknown (1859) 2325 2279 58 * 672 32.8 3.0 3.2 C04HBa0020F17.1 112586 113309 (15152) C HAT2_MT Unknown (1713) 2018 1097 59 3165 28.0 3.7 1.2 C04HBa0020F17.1 115093 116180 (12281) + Gypsy00126 Gypsy 8719 9833 (3024) 60 2866 23.4 3.9 5.8 C04HBa0020F17.1 115454 116309 (12152) C Gypsy00118 Gypsy (2847) 3560 2722 61 * 2022 12.3 1.9 0.0 C04HBa0020F17.1 116589 116898 (11563) + Unknown00034 Unknown 3702 4017 (5060) 62 513 26.5 0.7 0.0 C04HBa0020F17.1 117925 118075 (10386) + Unknown00040 Unknown 4371 4522 (160) 63 * 904 24.1 4.5 4.5 C04HBa0020F17.1 118001 118291 (10170) C Unknown00020 Unknown (4832) 373 83 64 385 21.6 11.2 7.1 C04HBa0020F17.1 118291 118514 (9947) + TONT1_LE_LTR Unknown 720 952 (52) 65 * 1106 18.1 1.2 0.9 C04HBa0020F17.1 119553 119832 (8629) C Unknown00040 Unknown (88) 4594 4371 66 355 27.0 2.1 5.5 C04HBa0020F17.1 120826 120970 (7491) C Unknown00043 Unknown (9281) 2043 1904 67 890 26.0 2.9 0.0 C04HBa0020F17.1 121217 121462 (6999) C TS2 Unknown (402) 253 1 68 267 17.9 1.8 0.0 C04HBa0020F17.1 123751 123806 (4655) + Unknown00034 Unknown 5143 5199 (3878) 69 1182 21.3 8.9 1.5 C04HBa0020F17.1 124463 124786 (3675) + Copia00172 Copia 1105 1452 (5175) 70 419 13.4 2.4 1.2 C04HBa0020F17.1 125795 125877 (2584) C SONATA2 Unknown (169) 84 1 71 419 24.3 0.8 5.1 C04HBa0020F17.1 128278 128394 (67) C TS2 Unknown (0) 655 544 72