##gff-version 3
##sequence-region C04HBa0049A17.1 1 169445
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	1133	1229	471	-	0	ID=TS2_alignment_1;Target=TS2 558 655 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	13065	13401	454	+	0	ID=RTE1_MT_alignment_1;Target=RTE1_MT 1879 2219 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	15742	15837	472	+	0	ID=Copia00172_alignment_1;Target=Copia00172 5221 5315 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	19715	19949	919	-	0	ID=Copia00105_alignment_1;Target=Copia00105 8153 8649 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	23389	23494	315	-	0	ID=Copia00030_alignment_1;Target=Copia00030 2687 2795 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	23613	23692	302	-	0	ID=Copia00030_alignment_2;Target=Copia00030 2686 2765 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	23726	23811	300	-	0	ID=Unknown00043_alignment_1;Target=Unknown00043 6991 7074 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	29895	30046	421	+	0	ID=Gypsy00163_alignment_1;Target=Gypsy00163 7741 7896 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	30282	30476	465	-	0	ID=Copia00172_alignment_2;Target=Copia00172 1299 1489 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	34141	34216	235	+	0	ID=Unknown00030_alignment_1;Target=Unknown00030 1209 1290 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	34155	34252	434	-	0	ID=Unknown00030_alignment_2;Target=Unknown00030 1275 1376 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	34364	34462	395	+	0	ID=Unknown00030_alignment_3;Target=Unknown00030 1288 1384 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	35162	35231	298	+	0	ID=SONATA2_alignment_1;Target=SONATA2 1 69 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	36701	36818	522	-	0	ID=Copia00172_alignment_3;Target=Copia00172 5195 5311 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	38263	38393	318	+	0	ID=Unknown00046_alignment_1;Target=Unknown00046 502 629 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	39910	40014	251	+	0	ID=Unknown00043_alignment_2;Target=Unknown00043 1888 1994 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	41439	41568	301	+	0	ID=Copia00030_alignment_3;Target=Copia00030 948 1084 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	47687	48263	1398	-	0	ID=TLP1_alignment_1;Target=TLP1 12 605 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	49796	49887	567	-	0	ID=Unknown00034_alignment_1;Target=Unknown00034 3851 3942 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	53156	53615	1239	-	0	ID=Copia00089_alignment_1;Target=Copia00089 10716 11176 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	55957	56125	1260	-	0	ID=Unknown00034_alignment_2;Target=Unknown00034 3847 4016 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	56160	56448	976	-	0	ID=Unknown00046_alignment_2;Target=Unknown00046 197 488 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	57524	57689	1004	+	0	ID=SONATA1_alignment_1;Target=SONATA1 1 171 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	57700	57984	1250	-	0	ID=TLP2_alignment_1;Target=TLP2 9 295 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	58479	58749	1068	+	0	ID=TLP1_alignment_2;Target=TLP1 379 662 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	58748	58827	236	+	0	ID=SONATA1_alignment_2;Target=SONATA1 160 230 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	59464	59709	940	+	0	ID=SONATA1_alignment_3;Target=SONATA1 1 243 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	60242	60485	1134	+	0	ID=Copia00172_alignment_4;Target=Copia00172 279 517 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	62298	62387	367	+	0	ID=Unknown00043_alignment_3;Target=Unknown00043 6998 7085 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	62646	62825	455	+	0	ID=Unknown00057_alignment_1;Target=Unknown00057 2129 2308 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	63159	63220	232	+	0	ID=Unknown00057_alignment_2;Target=Unknown00057 2673 2735 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	67478	67558	252	+	0	ID=Unknown00043_alignment_4;Target=Unknown00043 6990 7069 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	70924	71039	248	-	0	ID=Copia00172_alignment_5;Target=Copia00172 5200 5316 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	72719	72962	917	+	0	ID=TS2_alignment_2;Target=TS2 402 654 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	73649	73801	429	-	0	ID=SONATA1_alignment_4;Target=SONATA1 7 166 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	74700	74792	288	-	0	ID=Unknown00046_alignment_3;Target=Unknown00046 214 2838 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	74795	74830	275	+	0	ID=TLP2_alignment_2;Target=TLP2 44 79 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	76467	76515	255	-	0	ID=DTPH4_alignment_1;Target=DTPH4 8 56 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	79274	79393	536	+	0	ID=Copia00172_alignment_6;Target=Copia00172 5195 5313 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	81565	81647	538	+	0	ID=TS2_alignment_3;Target=TS2 568 650 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	85137	85377	283	-	0	ID=SONATA1_alignment_5;Target=SONATA1 1 243 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	85491	85711	1068	-	0	ID=SONATA2_alignment_2;Target=SONATA2 1 242 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	85865	86023	811	-	0	ID=SONATA2_alignment_3;Target=SONATA2 1 160 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	86962	87117	834	+	0	ID=SONATA2_alignment_4;Target=SONATA2 98 253 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	87523	87690	399	-	0	ID=SONATA2_alignment_5;Target=SONATA2 87 250 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	93934	94137	1347	+	0	ID=Gypsy00073_alignment_1;Target=Gypsy00073 11882 12084 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	94013	94154	424	-	0	ID=Gypsy00073_alignment_2;Target=Gypsy00073 202 339 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	94305	94710	2581	+	0	ID=Gypsy00073_alignment_3;Target=Gypsy00073 1 399 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	96803	96977	555	+	0	ID=Copia00110_alignment_1;Target=Copia00110 13366 13550 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	96832	97054	622	-	0	ID=Unknown00019_alignment_1;Target=Unknown00019 82 308 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	98328	98412	338	-	0	ID=SOD_SINE_alignment_1;Target=SOD_SINE 101 187 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	100482	100596	524	+	0	ID=MUDSOLD1_alignment_1;Target=MUDSOLD1 3 119 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	101009	101099	313	+	0	ID=MUDSOLD1_alignment_2;Target=MUDSOLD1 536 629 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	101664	101800	470	+	0	ID=Copia00019_alignment_1;Target=Copia00019 1201 1337 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	101801	101822	247	-	0	ID=ATCOPIA28_I_alignment_1;Target=ATCOPIA28_I 3419 3576 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	101845	101901	256	-	0	ID=Copia00132_alignment_1;Target=Copia00132 3448 3508 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	102015	102340	277	-	0	ID=COP2_I_MT_alignment_1;Target=COP2_I_MT 4141 4497 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	102170	102412	450	+	0	ID=Copia00110_alignment_2;Target=Copia00110 12631 12890 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	102476	102591	262	+	0	ID=Copia00012_alignment_1;Target=Copia00012 2461 2578 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	102700	102853	434	-	0	ID=Gypsy00163_alignment_2;Target=Gypsy00163 7741 7896 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	102851	102975	277	+	0	ID=Copia00221_alignment_1;Target=Copia00221 2610 2736 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	102977	103133	325	-	0	ID=Copia00124_alignment_1;Target=Copia00124 1932 2291 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	103651	103846	1373	+	0	ID=LSU-rRNA_Ath_alignment_1;Target=LSU-rRNA_Ath 1039 1237 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	112315	112477	472	-	0	ID=Copia00012_alignment_2;Target=Copia00012 1308 1470 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	115506	115768	387	+	0	ID=Copia00110_alignment_3;Target=Copia00110 12599 12890 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	115823	115974	325	+	0	ID=Copia00110_alignment_4;Target=Copia00110 12697 12848 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	116037	116147	517	-	0	ID=TS2_alignment_4;Target=TS2 59 171 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	118403	118532	305	+	0	ID=LINE1A_MT_alignment_1;Target=LINE1A_MT 1303 4520 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	118551	119378	1050	-	0	ID=Unknown00043_alignment_5;Target=Unknown00043 1794 9932 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	119646	119785	442	-	0	ID=Unknown00057_alignment_3;Target=Unknown00057 474 614 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	122854	123038	844	-	0	ID=SINE_SO_alignment_1;Target=SINE_SO 1 184 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	123205	123258	238	-	0	ID=MUDRAV3_MT_alignment_1;Target=MUDRAV3_MT 36 89 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	124616	124867	259	+	0	ID=Unknown00057_alignment_4;Target=Unknown00057 1713 1968 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	124967	125056	252	-	0	ID=SHALINE10_MT_alignment_1;Target=SHALINE10_MT 3149 3235 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	125363	125470	254	-	0	ID=MIUSE1_TM_alignment_1;Target=MIUSE1_TM 4578 4686 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	125721	125759	261	-	0	ID=HarbN_I_alignment_1;Target=HarbN_I 111 150 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	125750	125879	406	-	0	ID=HarbN_I_alignment_2;Target=HarbN_I 43 161 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	129121	129181	256	+	0	ID=MUDSOLT1_alignment_1;Target=MUDSOLT1 461 518 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	129140	129193	227	-	0	ID=MuDR1_HV_alignment_1;Target=MuDR1_HV 1242 1295 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	129194	129204	225	-	0	ID=Gypsy00042_alignment_1;Target=Gypsy00042 5926 5963 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	129566	129835	1653	+	0	ID=Copia00110_alignment_5;Target=Copia00110 2410 2717 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	132519	133251	2767	-	0	ID=Unknown00034_alignment_3;Target=Unknown00034 974 1771 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	133316	133327	650	-	0	ID=Unknown00046_alignment_4;Target=Unknown00046 81 167 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	133328	133409	669	-	0	ID=Copia00094_alignment_1;Target=Copia00094 4483 4564 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	135830	135977	949	-	0	ID=MUDSOLD1_alignment_3;Target=MUDSOLD1 479 628 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	135976	136033	401	-	0	ID=MUDSOLD1_alignment_4;Target=MUDSOLD1 33 90 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	144151	144235	306	+	0	ID=TS_alignment_1;Target=TS 58 153 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	144185	144263	256	-	0	ID=Unknown00049_alignment_1;Target=Unknown00049 1710 1788 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	144968	145294	1985	-	0	ID=Unknown00034_alignment_4;Target=Unknown00034 1 4019 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	145537	145633	253	+	0	ID=Copia00110_alignment_6;Target=Copia00110 10584 10678 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	145762	145858	280	-	0	ID=SINE_SO_alignment_2;Target=SINE_SO 1 96 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	146368	146593	649	-	0	ID=Unknown00025_alignment_1;Target=Unknown00025 246 470 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	146880	147042	501	+	0	ID=Gypsy00163_alignment_3;Target=Gypsy00163 8021 8170 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	148565	148624	266	-	0	ID=Copia00151_alignment_1;Target=Copia00151 9543 9600 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	149206	149283	249	+	0	ID=GYCUME1_LTR_alignment_1;Target=GYCUME1_LTR 336 407 +
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	149247	149297	241	-	0	ID=ATENSPM10_alignment_1;Target=ATENSPM10 1106 1155 -
C04HBa0049A17.1	RepeatMasker	nucleotide_motif	149968	150081	551	+	0	ID=Copia00151_alignment_2;Target=Copia00151 10059 10171 +