SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 1184 16.4 0.0 4.4 C04HBa0065J16.1 1 229 (98202) C Unknown00025 Unknown (3778) 2530 2312 1 * 4479 17.9 1.1 2.2 C04HBa0065J16.1 229 1124 (97307) + Gypsy00188 Gypsy 1226 2111 (5724) 2 1854 26.7 1.5 2.4 C04HBa0065J16.1 1181 1859 (96572) C Gypsy00155 Gypsy (5693) 956 284 3 1558 22.9 1.4 1.8 C04HBa0065J16.1 1650 2094 (96337) C Copia00089 Copia (8491) 2965 2523 4 * 277 22.3 3.7 4.6 C04HBa0065J16.1 2090 2197 (96234) + Gypsy00191 Gypsy 2605 2711 (1537) 5 * 1411 19.9 2.4 1.5 C04HBa0065J16.1 2310 2650 (95781) C Gypsy00155 Gypsy (680) 5969 5626 6 1265 24.4 3.1 2.9 C04HBa0065J16.1 2640 3052 (95379) C Copia00089 Copia (10521) 935 522 4 * 9627 19.7 6.8 3.8 C04HBa0065J16.1 3101 5661 (92770) C Gypsy00123 Gypsy (4856) 2891 255 7 * 30922 19.7 4.1 3.2 C04HBa0065J16.1 5256 13725 (84706) + Gypsy00059 Gypsy 1 8455 (6) 8 12724 20.6 3.1 3.6 C04HBa0065J16.1 11689 16104 (82327) C Gypsy00123 Gypsy (1065) 6615 240 9 * 225 25.8 1.5 1.5 C04HBa0065J16.1 19427 19493 (78938) + Gypsy00197 Gypsy 7833 7899 (1042) 10 238 22.4 12.2 13.3 C04HBa0065J16.1 20345 20524 (77907) C Gypsy00140 Gypsy (998) 6029 5852 11 285 32.0 3.6 2.0 C04HBa0065J16.1 21951 22202 (76229) + Gypsy00121 Gypsy 1841 2096 (6230) 12 * 1456 34.7 2.5 2.0 C04HBa0065J16.1 22201 23189 (75242) + Gypsy00172 Gypsy 1223 2216 (3697) 13 3612 32.9 4.1 3.6 C04HBa0065J16.1 23308 26589 (71842) C Gypsy00042 Gypsy (3518) 3965 776 14 488 27.3 6.0 3.7 C04HBa0065J16.1 27166 27382 (71049) C Gypsy00139 Gypsy (469) 9622 9401 15 410 32.5 7.1 7.3 C04HBa0065J16.1 27201 28114 (70317) + Gypsy00086 Gypsy 1520 2431 (5052) 16 690 31.3 2.8 2.0 C04HBa0065J16.1 27521 27994 (70437) C Gypsy00202 Gypsy (1043) 13392 5159 17 246 17.4 7.1 1.4 C04HBa0065J16.1 30491 30560 (67871) + Gypsy00208 Gypsy 4717 4790 (3265) 18 6092 26.4 3.3 4.8 C04HBa0065J16.1 30837 33477 (64954) C Gypsy00060 Gypsy (38) 5703 3103 19 * 9235 23.6 3.8 0.6 C04HBa0065J16.1 32648 35157 (63274) + Gypsy00187 Gypsy 936 3525 (2339) 20 8032 25.0 3.4 3.1 C04HBa0065J16.1 35145 38181 (60250) C Gypsy00139 Gypsy (2945) 7146 4102 21 * 2004 27.2 4.1 5.1 C04HBa0065J16.1 38191 39512 (58919) C Unknown00002 Unknown (1885) 8096 2625 22 1636 19.3 0.7 1.7 C04HBa0065J16.1 40638 41043 (57388) C Unknown00002 Unknown (2997) 6984 6583 23 429 22.8 2.1 3.5 C04HBa0065J16.1 41016 41156 (57275) C Unknown00002 Unknown (3517) 6464 6326 23 * 5190 21.7 3.8 4.9 C04HBa0065J16.1 41184 43012 (55419) C Unknown00002 Unknown (3787) 6194 4385 23 2082 34.0 5.3 5.3 C04HBa0065J16.1 43018 45713 (52718) + Gypsy00056 Gypsy 2813 5508 (6642) 24 3289 31.9 3.9 4.3 C04HBa0065J16.1 43144 45271 (53160) C Gypsy00139 Gypsy (6161) 3930 1813 25 313 33.4 5.3 6.5 C04HBa0065J16.1 45520 46044 (52387) C Gypsy00139 Gypsy (8385) 1706 1188 25 5227 26.3 5.8 0.8 C04HBa0065J16.1 46429 48299 (50132) C Gypsy00066 Gypsy (4748) 7099 419 26 4106 25.8 3.5 0.1 C04HBa0065J16.1 47249 48442 (49989) + Gypsy00192 Gypsy 7133 8463 (3919) 27 * 5855 27.2 4.0 3.7 C04HBa0065J16.1 48443 50639 (47792) + Gypsy00056 Gypsy 8330 10533 (1617) 28 2452 25.9 1.6 2.0 C04HBa0065J16.1 50640 51535 (46896) + Gypsy00025 Gypsy 6863 7754 (572) 29 2141 24.2 6.0 8.5 C04HBa0065J16.1 51540 52780 (45651) + Gypsy00177 Gypsy 5910 7120 (3185) 30 75294 10.0 1.4 1.5 C04HBa0065J16.1 52782 66566 (31865) + Gypsy00101 Gypsy 1 11682 (0) 31 10876 9.3 1.4 0.2 C04HBa0065J16.1 65172 66730 (31701) C GYPSOL2_LTR Unknown (0) 1580 4 32 20690 26.1 4.3 4.7 C04HBa0065J16.1 66732 74680 (23751) + Gypsy00025 Gypsy 403 8320 (6) 33 2814 26.5 7.7 6.3 C04HBa0065J16.1 74684 76712 (21719) C Gypsy00080 Gypsy (1275) 6475 1292 34 2903 23.5 3.4 1.5 C04HBa0065J16.1 75204 76091 (22340) + Gypsy00025 Gypsy 164 1068 (7258) 35 6599 27.6 4.1 3.0 C04HBa0065J16.1 76713 79143 (19288) + Gypsy00037 Gypsy 6086 8542 (513) 36 4859 25.0 2.2 1.9 C04HBa0065J16.1 78323 79855 (18576) C Gypsy00139 Gypsy (2948) 7143 5606 37 * 799 23.1 0.0 0.0 C04HBa0065J16.1 79849 80021 (18410) + Gypsy00090 Gypsy 3290 3462 (2110) 38 * 415 27.9 2.8 4.4 C04HBa0065J16.1 80012 80330 (18101) + Copia00112 Copia 6132 6445 (2442) 39 * 662 25.9 3.9 3.6 C04HBa0065J16.1 82406 82737 (15694) C Copia00089 Copia (7624) 3832 3500 40 2256 26.8 4.1 4.8 C04HBa0065J16.1 83391 84761 (13670) C Unknown00002 Unknown (1884) 8097 1636 41 343 12.7 7.0 2.3 C04HBa0065J16.1 85353 85481 (12950) + Gypsy00019 Gypsy 569 703 (6214) 42 1703 19.9 0.7 1.5 C04HBa0065J16.1 85863 86266 (12165) C Unknown00002 Unknown (2997) 6984 6584 43 505 20.9 4.1 5.4 C04HBa0065J16.1 86251 86397 (12034) C Unknown00002 Unknown (3530) 6451 6307 43 * 386 25.4 8.2 3.4 C04HBa0065J16.1 86411 86557 (11874) C Gypsy00197 Gypsy (8674) 267 114 44 * 914 27.1 5.2 6.3 C04HBa0065J16.1 86442 86898 (11533) + Gypsy00198 Gypsy 7014 7465 (779) 45 * 953 24.7 5.3 3.7 C04HBa0065J16.1 86568 86946 (11485) C Gypsy00046 Gypsy (361) 10710 10326 46 * 2201 21.7 6.6 3.0 C04HBa0065J16.1 86670 87334 (11097) C Unknown00002 Unknown (4008) 5973 5285 43 712 18.6 0.7 0.7 C04HBa0065J16.1 87315 87455 (10976) C Unknown00002 Unknown (5458) 4523 4383 43 * 227 21.3 2.0 0.5 C04HBa0065J16.1 87883 87948 (10483) C Gypsy00153 Gypsy (865) 5204 5127 47 866 36.9 4.5 3.2 C04HBa0065J16.1 88408 89731 (8700) + Gypsy00031 Gypsy 131 1472 (5797) 48 785 32.2 5.9 1.0 C04HBa0065J16.1 89735 90142 (8289) C Gypsy00065 Gypsy (2417) 4352 3925 49 719 31.8 4.6 2.7 C04HBa0065J16.1 92413 92930 (5501) C Gypsy00153 Gypsy (2978) 3062 2535 50 425 28.4 0.7 0.0 C04HBa0065J16.1 93931 94071 (4360) C Gypsy00135 Gypsy (2012) 3226 3085 51 245 21.0 0.0 1.6 C04HBa0065J16.1 94859 94921 (3510) C Copia00089 Copia (8264) 3192 3131 52 18447 15.9 0.5 0.2 C04HBa0065J16.1 95338 98431 (0) C Unknown00006 Unknown (0) 10590 7487 53