SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 2093 4.7 1.8 3.2 C04HBa0078E04.1 8561 8843 (116607) C Copia00205 Copia (4274) 5982 5704 1 1805 21.2 1.0 1.8 C04HBa0078E04.1 9661 10044 (115406) + Copia00211 Copia 1379 1759 (2411) 2 485 8.0 0.0 2.6 C04HBa0078E04.1 11554 11630 (113820) C Unknown00034 Unknown (3864) 5213 5139 3 1196 15.6 0.5 0.0 C04HBa0078E04.1 12971 13162 (112288) + Copia00211 Copia 1969 2161 (2009) 2 799 20.2 1.0 2.6 C04HBa0078E04.1 13729 13921 (111529) C Copia00108 Copia (7231) 198 9 4 382 26.5 6.6 0.7 C04HBa0078E04.1 14030 14166 (111284) C TOPIE1_LE_LTR Unknown (823) 242 98 5 3712 16.6 0.3 0.2 C04HBa0078E04.1 14269 14907 (110543) + Copia00211 Copia 2165 2804 (1366) 6 3099 24.8 5.0 4.3 C04HBa0078E04.1 24140 25392 (100058) C Unknown00002 Unknown (1905) 8076 2309 7 240 2.9 5.7 0.0 C04HBa0078E04.1 25960 25994 (99456) C Unknown00054 Unknown (4825) 666 630 8 2222 14.3 1.2 3.1 C04HBa0078E04.1 26239 26657 (98793) C Unknown00002 Unknown (2997) 6984 6574 9 * 4513 16.6 9.4 5.8 C04HBa0078E04.1 26648 27807 (97643) C Unknown00002 Unknown (3535) 6446 5245 9 2272 18.1 1.3 2.1 C04HBa0078E04.1 27797 28331 (97119) C Unknown00002 Unknown (4908) 5073 4543 9 * 328 0.0 0.0 0.0 C04HBa0078E04.1 28316 28380 (97070) + STOWAWAY50_OS Unknown 65 129 (45) 10 * 1248 11.1 0.5 1.0 C04HBa0078E04.1 28339 28539 (96911) C Unknown00002 Unknown (5403) 4578 4379 11 330 31.1 0.8 1.6 C04HBa0078E04.1 28570 28690 (96760) C Gypsy00176 Gypsy (5068) 2560 2441 12 229 18.0 0.0 3.2 C04HBa0078E04.1 32115 32177 (93273) + Copia00151 Copia 7167 7227 (3534) 13 623 28.5 2.7 2.7 C04HBa0078E04.1 33038 33257 (92193) + GYPSODE1_LTR Unknown 217 436 (2527) 14 230 26.8 0.0 6.6 C04HBa0078E04.1 33350 33425 (92025) + GYPSODE1_LTR Unknown 523 593 (2370) 14 246 14.6 0.0 2.0 C04HBa0078E04.1 37742 37790 (87660) C Gypsy00179 Gypsy (675) 5131 5084 15 4654 13.1 0.6 0.0 C04HBa0078E04.1 37791 38506 (86944) C Gypsy00172 Gypsy (1255) 4658 3939 16 * 19118 8.5 0.5 2.5 C04HBa0078E04.1 38493 41225 (84225) C Gypsy00127 Gypsy (3866) 2681 2 17 15720 8.3 1.5 0.2 C04HBa0078E04.1 39765 41873 (83577) C Copia00153 Copia (892) 6497 4362 18 * 235 25.8 3.0 0.0 C04HBa0078E04.1 42845 42910 (82540) + Gypsy00203 Gypsy 5116 5183 (2331) 19 238 22.2 0.0 2.7 C04HBa0078E04.1 45794 45867 (79583) + Copia00151 Copia 7156 7227 (3534) 20 425 32.0 2.2 0.6 C04HBa0078E04.1 70561 70739 (54711) C Copia00173 Copia (2554) 2474 2293 21 249 10.8 0.0 0.0 C04HBa0078E04.1 72071 72107 (53343) + Gypsy00161 Gypsy 6874 6910 (156) 22 4972 15.1 1.7 7.0 C04HBa0078E04.1 72916 74020 (51430) + Copia00191 Copia 2640 3686 (1040) 23 * 13304 13.8 2.3 3.1 C04HBa0078E04.1 73346 75783 (49667) C Copia00205 Copia (4553) 5703 3287 24 1607 17.1 1.1 3.0 C04HBa0078E04.1 75789 76150 (49300) C Copia00205 Copia (7446) 2810 2456 24 1327 26.9 4.7 2.8 C04HBa0078E04.1 76197 76811 (48639) C Copia00205 Copia (7807) 2449 1823 24 * 13075 6.0 1.4 5.5 C04HBa0078E04.1 76806 78727 (46723) C Gypsy00045 Gypsy (2479) 3535 1693 25 1305 24.9 4.0 2.5 C04HBa0078E04.1 78723 79406 (46044) C Copia00205 Copia (8418) 1838 1110 24 * 244 23.0 4.4 3.3 C04HBa0078E04.1 79432 79521 (45929) C Gypsy00159 Gypsy (4221) 1538 1448 26 2072 24.3 2.8 2.0 C04HBa0078E04.1 79538 80142 (45308) C Copia00205 Copia (9148) 1108 499 24 5004 14.9 1.7 7.0 C04HBa0078E04.1 80949 82054 (43396) + Copia00191 Copia 2640 3686 (1040) 27 * 9084 4.9 1.4 0.5 C04HBa0078E04.1 81379 82567 (42883) C Copia00205 Copia (4553) 5703 4504 28 5474 6.2 2.8 4.2 C04HBa0078E04.1 83572 84364 (41086) + Gypsy00043 Gypsy 532 1313 (12581) 29 18353 11.9 1.1 0.7 C04HBa0078E04.1 85725 88454 (36996) + Copia00008 Copia 1928 4666 (468) 30 262 14.9 2.1 0.0 C04HBa0078E04.1 88442 88488 (36962) C Copia00008 Copia (388) 4746 4699 31 * 384 27.1 1.8 5.4 C04HBa0078E04.1 91410 91631 (33819) + Gypsy00202 Gypsy 7803 8016 (6419) 32 337 17.2 4.4 4.4 C04HBa0078E04.1 96066 96156 (29294) + Unknown00050 Unknown 3776 3866 (1765) 33 708 26.8 1.9 1.6 C04HBa0078E04.1 96374 96631 (28819) + Copia00110 Copia 12723 12981 (1151) 34 252 31.2 6.3 0.8 C04HBa0078E04.1 96636 96761 (28689) C Copia00124 Copia (2518) 2752 2620 35 572 24.6 8.3 0.6 C04HBa0078E04.1 96966 97145 (28305) C Copia00124 Copia (3184) 2086 1893 35 396 30.8 7.0 3.6 C04HBa0078E04.1 97016 97372 (28078) C ATCOPIA29_I Unknown (2796) 603 235 36 * 1234 32.1 4.5 3.5 C04HBa0078E04.1 104354 105245 (20205) + RTE1_MT Unknown 2139 3039 (116) 37 1290 23.0 0.0 3.9 C04HBa0078E04.1 111214 111521 (13929) C TLP2 Unknown (5) 301 6 38 630 17.1 19.1 0.0 C04HBa0078E04.1 112383 112534 (12916) + TLP2 Unknown 123 303 (3) 39 1183 24.6 1.7 0.7 C04HBa0078E04.1 114450 114748 (10702) + TLP2 Unknown 1 302 (4) 40 923 24.1 3.6 5.1 C04HBa0078E04.1 114461 114796 (10654) C TLP1 Unknown (0) 662 332 41 * 554 23.6 3.1 1.3 C04HBa0078E04.1 116359 116517 (8933) + Copia00105 Copia 8213 8374 (483) 42 416 26.6 0.7 2.1 C04HBa0078E04.1 124453 124594 (856) C Copia00089 Copia (7440) 4016 3877 43