SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 35636 6.5 1.2 3.7 C04HBa0178E24.1 1 4919 (132913) + Gypsy00078 Gypsy 245 5038 (3069) 1 1105 21.6 7.4 6.2 C04HBa0178E24.1 7007 7440 (130392) + Copia00172 Copia 1600 2038 (4589) 2 267 16.7 1.6 3.2 C04HBa0178E24.1 8667 8728 (129104) + Copia00086 Copia 6789 6849 (7) 3 1222 14.8 0.0 0.3 C04HBa0178E24.1 10803 11110 (126722) C Copia00078 Copia (2639) 394 2 4 5247 8.4 0.3 0.3 C04HBa0178E24.1 11419 12143 (125689) C Copia00078 Copia (0) 3033 2309 5 * 6604 10.0 0.7 0.3 C04HBa0178E24.1 12134 13085 (124747) + Copia00011 Copia 708 1663 (1285) 6 5511 9.4 1.0 0.0 C04HBa0178E24.1 13070 13856 (123976) C Copia00078 Copia (2233) 800 6 5 * 2495 7.5 0.0 0.0 C04HBa0178E24.1 14124 14445 (123387) C Copia00078 Copia (1) 3032 2711 7 319 21.6 8.9 4.5 C04HBa0178E24.1 15246 15321 (122511) C Copia00112 Copia (1089) 7798 7658 8 324 17.7 1.2 1.2 C04HBa0178E24.1 15322 15401 (122431) + MuDR1_HV Unknown 1241 1320 (5140) 9 * 407 26.4 0.0 0.0 C04HBa0178E24.1 15334 15439 (122393) + Gypsy00042 Gypsy 5954 6059 (1439) 10 319 21.6 8.9 4.5 C04HBa0178E24.1 15402 15424 (122408) C Copia00112 Copia (1230) 7657 7616 8 * 254 11.4 18.3 3.7 C04HBa0178E24.1 15439 15520 (122312) + SONATA2 Unknown 123 216 (37) 11 * 400 22.0 2.1 6.4 C04HBa0178E24.1 15494 15634 (122198) C Gypsy00071 Gypsy (10182) 2529 2395 12 774 26.6 4.4 2.9 C04HBa0178E24.1 15849 16189 (121643) + Unknown00046 Unknown 6613 6958 (3086) 13 353 29.1 0.6 6.8 C04HBa0178E24.1 16722 16898 (120934) C Unknown00041 Unknown (691) 2871 2706 14 1116 19.8 0.7 5.8 C04HBa0178E24.1 19517 19790 (118042) C Unknown00041 Unknown (600) 2962 2703 15 277 22.8 16.8 3.2 C04HBa0178E24.1 27301 27395 (110437) C Unknown00049 Unknown (8533) 498 391 16 264 27.8 5.7 5.0 C04HBa0178E24.1 27459 27598 (110234) C SZ-37 Unknown (5243) 6753 6613 17 * 403 29.0 6.3 6.2 C04HBa0178E24.1 27541 27881 (109951) + Copia00071 Copia 177 505 (4043) 18 316 5.6 7.4 0.0 C04HBa0178E24.1 37281 37334 (100498) + Unknown00030 Unknown 1323 1380 (86) 19 672 21.3 2.6 6.1 C04HBa0178E24.1 39371 39600 (98232) C Unknown00025 Unknown (5834) 474 253 20 2429 4.6 0.7 0.0 C04HBa0178E24.1 40976 41281 (96551) + Copia00027 Copia 3953 4260 (205) 21 * 26871 4.6 0.1 0.1 C04HBa0178E24.1 41274 44561 (93271) C Copia00004 Copia (1304) 3289 1 22 260 21.1 2.1 4.3 C04HBa0178E24.1 44527 44620 (93212) + COPI1_LTR Unknown 200 291 (17) 23 * 311 26.0 0.0 1.0 C04HBa0178E24.1 46194 46290 (91542) + EnSpm1_HV Unknown 9280 9375 (1159) 24 281 26.7 8.1 7.5 C04HBa0178E24.1 57648 57821 (80011) C HAT1_MT Unknown (4414) 175 1 25 708 28.8 7.6 1.0 C04HBa0178E24.1 59980 60267 (77565) + Gypsy00182 Gypsy 5251 5557 (603) 26 235 16.1 7.0 1.8 C04HBa0178E24.1 60777 60833 (76999) C Gypsy00146 Gypsy (6141) 1872 1813 27 251 20.3 0.0 6.3 C04HBa0178E24.1 60886 60948 (76884) + Unknown00048 Unknown 3398 3456 (570) 28 1691 21.8 1.9 1.9 C04HBa0178E24.1 61150 61565 (76267) + Unknown00045 Unknown 3925 4340 (184) 29 1489 25.6 3.3 4.1 C04HBa0178E24.1 61152 61668 (76164) + Gypsy00033 Gypsy 5071 5583 (5412) 30 * 49541 11.9 2.0 1.7 C04HBa0178E24.1 61717 70666 (67166) + Gypsy00073 Gypsy 2890 11846 (238) 31 1773 26.9 2.0 1.9 C04HBa0178E24.1 70667 71368 (66464) + Gypsy00033 Gypsy 5633 6335 (4660) 30 758 23.9 0.8 1.2 C04HBa0178E24.1 71270 71510 (66322) + Unknown00045 Unknown 4 243 (4281) 32 * 320 30.9 1.8 0.0 C04HBa0178E24.1 71518 71627 (66205) + Unknown00002 Unknown 9184 9295 (686) 33 225 25.0 0.0 0.0 C04HBa0178E24.1 71929 71980 (65852) C Gypsy00177 Gypsy (2432) 7873 7822 34 3728 17.5 0.8 3.9 C04HBa0178E24.1 72177 73164 (64668) + Unknown00056 Unknown 5 5491 (0) 35 2982 22.6 4.3 3.6 C04HBa0178E24.1 75628 76712 (61120) + Unknown00056 Unknown 786 1878 (3231) 36 1989 26.9 7.6 5.0 C04HBa0178E24.1 76801 78059 (59773) + Unknown00056 Unknown 1816 3107 (2002) 37 * 3972 19.0 1.6 3.3 C04HBa0178E24.1 78054 78929 (58903) + Gypsy00033 Gypsy 6542 7402 (3593) 38 289 28.9 2.0 1.0 C04HBa0178E24.1 79258 79355 (58477) C Unknown00054 Unknown (620) 4871 4773 39 1979 23.0 4.1 2.6 C04HBa0178E24.1 79367 80066 (57766) + Unknown00045 Unknown 1334 2044 (2480) 40 4942 26.2 1.9 3.4 C04HBa0178E24.1 81973 83495 (54337) C Copia00086 Copia (2) 6854 5355 41 * 6611 17.6 2.9 2.4 C04HBa0178E24.1 83487 84825 (53007) + Gypsy00165 Gypsy 5379 6724 (374) 42 457 25.2 5.7 2.6 C04HBa0178E24.1 84643 84907 (52925) C Gypsy00019 Gypsy (6338) 579 307 43 * 1136 26.9 4.4 2.4 C04HBa0178E24.1 85500 85956 (51876) C Gypsy00203 Gypsy (647) 6867 6402 44 379 16.2 0.0 1.3 C04HBa0178E24.1 85962 86036 (51796) + Gypsy00016 Gypsy 6518 6591 (508) 45 * 930 22.1 5.4 3.1 C04HBa0178E24.1 86010 86359 (51473) + Gypsy00006 Gypsy 2169 2526 (5253) 46 2404 27.2 1.1 3.9 C04HBa0178E24.1 86499 87373 (50459) C Copia00086 Copia (1613) 5243 4393 47 5635 27.9 2.3 3.8 C04HBa0178E24.1 87403 89761 (48071) C Copia00086 Copia (2470) 4386 2063 47 541 28.6 5.0 8.6 C04HBa0178E24.1 93149 93508 (44324) C Gypsy00177 Gypsy (5668) 4637 4291 48 290 24.4 6.1 3.0 C04HBa0178E24.1 93426 93556 (44276) C Unknown00002 Unknown (4262) 5719 5585 49 * 243 28.0 0.0 3.9 C04HBa0178E24.1 93588 93691 (44141) C Gypsy00080 Gypsy (7658) 2288 2189 50 334 22.7 6.7 1.5 C04HBa0178E24.1 94132 94265 (43567) + Gypsy00038 Gypsy 7374 7514 (204) 51 15266 25.7 3.9 5.1 C04HBa0178E24.1 94287 101652 (36180) C Gypsy00038 Gypsy (461) 8404 826 52 * 17751 24.5 2.5 2.8 C04HBa0178E24.1 96281 101827 (36005) + Gypsy00202 Gypsy 960 12958 (1371) 53 2104 17.0 1.0 0.3 C04HBa0178E24.1 101835 102217 (35615) C Gypsy00118 Gypsy (5985) 422 37 54 * 32361 23.9 3.3 4.6 C04HBa0178E24.1 102191 112870 (24962) + Gypsy00056 Gypsy 261 10824 (1326) 55 754 16.8 0.8 0.0 C04HBa0178E24.1 112866 112996 (24836) C Gypsy00118 Gypsy (6233) 174 43 56 * 3178 23.6 3.5 4.7 C04HBa0178E24.1 112977 113973 (23859) + Gypsy00056 Gypsy 261 1245 (10905) 57 4786 24.8 3.1 5.1 C04HBa0178E24.1 113975 115918 (21914) + Gypsy00046 Gypsy 8210 10115 (956) 58 3683 23.9 2.8 4.0 C04HBa0178E24.1 116057 117767 (20065) C Gypsy00177 Gypsy (630) 7412 5555 59 5632 20.6 5.3 3.6 C04HBa0178E24.1 117843 119395 (18437) C GYPSOL2_LTR Unknown (0) 1580 2 60 1269 25.3 0.6 1.4 C04HBa0178E24.1 119394 119742 (18090) + Gypsy00188 Gypsy 1766 2111 (5724) 61 * 228 26.3 4.1 3.1 C04HBa0178E24.1 119968 120065 (17767) + Unknown00045 Unknown 1898 1996 (2528) 62 261 22.6 15.4 4.0 C04HBa0178E24.1 120257 120431 (17401) C Copia00089 Copia (7904) 3552 3358 63 4282 15.7 3.0 2.1 C04HBa0178E24.1 121664 122554 (15278) + Copia00089 Copia 6614 7512 (3944) 64 12867 15.4 2.8 3.0 C04HBa0178E24.1 122610 125109 (12723) + Copia00089 Copia 7514 10007 (1449) 64 3266 28.9 3.4 2.8 C04HBa0178E24.1 124668 126153 (11679) + TONT2-I_PV Unknown 2543 4038 (632) 65 * 4436 17.0 2.4 2.5 C04HBa0178E24.1 126241 127134 (10698) + Copia00089 Copia 10286 11178 (278) 66 2798 18.7 2.3 4.3 C04HBa0178E24.1 131859 132510 (5322) + Copia00198 Copia 2861 3499 (4857) 67 719 25.8 4.2 4.2 C04HBa0178E24.1 132884 133219 (4613) + Copia00110 Copia 12481 12816 (1316) 68 464 32.3 7.2 0.8 C04HBa0178E24.1 133258 133507 (4325) + Copia00012 Copia 2463 2728 (2276) 69 669 26.1 13.6 1.3 C04HBa0178E24.1 133525 133834 (3998) C Copia00013 Copia (2829) 912 565 70 2353 19.3 6.8 0.0 C04HBa0178E24.1 134049 134550 (3282) + Copia00019 Copia 2856 3391 (1856) 71 501 21.6 1.2 8.9 C04HBa0178E24.1 135539 135706 (2126) + Copia00198 Copia 2880 3034 (5322) 72 * 822 15.8 4.4 0.0 C04HBa0178E24.1 135704 135861 (1971) + SONATA2 Unknown 89 253 (0) 73 1646 24.2 5.9 6.5 C04HBa0178E24.1 136477 137267 (565) + Gypsy00077 Gypsy 5249 6035 (78) 74 * 2336 22.5 1.2 1.7 C04HBa0178E24.1 137259 137832 (0) + Unknown00029 Unknown 3703 4273 (1436) 75