SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 1314 10.5 0.5 2.8 C04HBa0075G11.1 10354 10568 (139600) + Copia00172 Copia 311 520 (6107) 1 306 28.3 4.3 2.6 C04HBa0075G11.1 21517 21632 (128536) + Copia00089 Copia 522 639 (10817) 2 416 26.7 9.1 8.6 C04HBa0075G11.1 21709 22093 (128075) + Gypsy00077 Gypsy 5415 5801 (312) 3 465 25.4 9.0 4.0 C04HBa0075G11.1 21795 22016 (128152) C Gypsy00046 Gypsy (6541) 4530 4298 4 1406 20.7 13.1 6.3 C04HBa0075G11.1 22360 22895 (127273) + Gypsy00155 Gypsy 5452 6023 (626) 5 509 14.3 1.7 6.7 C04HBa0075G11.1 22796 22915 (127253) C Gypsy00046 Gypsy (7501) 3570 3457 6 * 730 22.0 8.1 5.3 C04HBa0075G11.1 29798 30157 (120011) C Gypsy00073 Gypsy (10905) 1179 810 7 250 23.1 2.8 1.9 C04HBa0075G11.1 31748 31853 (118315) + SONATA1 Unknown 70 176 (67) 8 231 25.9 0.0 1.8 C04HBa0075G11.1 43587 43641 (106527) + DTPH4 Unknown 2 55 (702) 9 360 23.1 0.0 1.1 C04HBa0075G11.1 43677 43768 (106400) C Copia00105 Copia (198) 8659 8569 10 574 17.1 1.9 5.0 C04HBa0075G11.1 50383 50542 (99626) C Unknown00025 Unknown (5903) 405 251 11 229 19.1 0.0 0.0 C04HBa0075G11.1 51659 51700 (98468) + Gypsy-9-I_CR Unknown 10850 10891 (1513) 12 386 23.7 11.7 4.1 C04HBa0075G11.1 53825 53969 (96199) C Copia00105 Copia (134) 8723 8568 13 595 22.1 2.5 0.0 C04HBa0075G11.1 54611 54732 (95436) + Copia00105 Copia 8183 8307 (550) 14 233 16.7 0.0 0.0 C04HBa0075G11.1 76188 76223 (73945) C SINE1_SO Unknown (32) 168 133 15 257 17.0 1.9 0.0 C04HBa0075G11.1 79569 79621 (70547) C ATLINEIII Unknown (5352) 56 3 16 1562 21.3 0.0 0.0 C04HBa0075G11.1 86081 86380 (63788) + TLP2 Unknown 6 305 (1) 17 5323 12.1 8.8 0.9 C04HBa0075G11.1 88864 89842 (60326) + Unknown00038 Unknown 3435 4490 (4617) 18 622 9.9 0.0 2.9 C04HBa0075G11.1 94341 94444 (55724) C Copia00110 Copia (11622) 2510 2410 19 260 22.6 5.4 0.0 C04HBa0075G11.1 98391 98483 (51685) C Unknown00043 Unknown (5937) 5387 5290 20 501 27.5 8.2 0.0 C04HBa0075G11.1 101505 101675 (48493) + SINE_SO Unknown 3 187 (2) 21 393 31.8 3.6 6.0 C04HBa0075G11.1 102706 103006 (47162) C TLP1 Unknown (0) 662 369 22 599 17.5 4.3 1.7 C04HBa0075G11.1 110542 110657 (39511) + Copia00172 Copia 5195 5313 (1314) 23 875 21.4 5.6 0.0 C04HBa0075G11.1 115094 115327 (34841) C SONATA2 Unknown (3) 250 4 24 239 9.4 0.0 0.0 C04HBa0075G11.1 117185 117237 (32931) + MuDR1_HV Unknown 1241 1293 (5167) 25 * 272 9.2 10.8 0.0 C04HBa0075G11.1 117196 117260 (32908) C MuDR1_HV Unknown (5165) 1295 1224 26 809 12.7 0.6 0.6 C04HBa0075G11.1 121410 121568 (28600) C Copia00110 Copia (817) 13315 13157 27 672 12.4 10.8 0.0 C04HBa0075G11.1 121463 121591 (28577) C Gypsy00043 Gypsy (13263) 631 489 28 * 264 21.3 1.6 1.6 C04HBa0075G11.1 145206 145267 (4901) C Unknown00057 Unknown (2828) 798 737 29 258 14.5 4.0 11.3 C04HBa0075G11.1 146990 147113 (3055) + VANDAL13 Unknown 7550 7664 (4483) 30 343 6.3 0.0 1.6 C04HBa0075G11.1 147065 147128 (3040) C Copia00181 Copia (351) 1885 1823 31 280 4.9 0.0 0.0 C04HBa0075G11.1 147079 147139 (3029) C Gypsy00046 Gypsy (6936) 4135 4075 32 * 322 12.6 0.0 0.6 C04HBa0075G11.1 147140 147151 (3017) C MUDSOLT1 Unknown (3988) 977 575 33 225 26.4 11.0 1.4 C04HBa0075G11.1 147766 147838 (2330) C TS Unknown (1) 160 81 34