SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 2448 28.0 2.0 1.8 C04SLm0141K23.1 1 983 (146737) + Unknown00052 Unknown 3682 4666 (3) 1 * 3157 25.1 4.0 3.5 C04SLm0141K23.1 140 1224 (146496) C Unknown00016 Unknown (3210) 1771 682 2 1671 19.7 5.5 1.3 C04SLm0141K23.1 1601 2032 (145688) + Gypsy00180 Gypsy 3635 6311 (3156) 3 2004 22.0 6.8 3.9 C04SLm0141K23.1 2036 2934 (144786) + Gypsy00180 Gypsy 4138 7558 (5857) 4 867 24.6 4.0 6.0 C04SLm0141K23.1 2934 3509 (144211) + Gypsy00140 Gypsy 4440 5719 (2223) 5 * 1436 12.7 0.4 1.3 C04SLm0141K23.1 3676 3907 (143813) C Gypsy00154 Gypsy (7913) 1437 1208 6 * 13569 7.4 2.5 0.3 C04SLm0141K23.1 3906 5758 (141962) C Gypsy00073 Gypsy (7296) 4788 2895 7 39218 19.0 2.7 2.6 C04SLm0141K23.1 5774 15404 (132316) + Gypsy00094 Gypsy 1 8788 (20) 8 7566 12.8 1.3 2.8 C04SLm0141K23.1 15382 16657 (131063) + Gypsy00021 Gypsy 3 1259 (8338) 9 * 1925 22.1 1.6 1.6 C04SLm0141K23.1 16657 17348 (130372) + Gypsy00140 Gypsy 5513 8884 (973) 10 * 294 21.1 3.9 1.3 C04SLm0141K23.1 17419 17495 (130225) C Gypsy00003 Gypsy (2152) 6241 6163 11 * 348 21.9 2.0 3.0 C04SLm0141K23.1 17472 17570 (130150) C Unknown00050 Unknown (1478) 4153 4056 12 * 522 18.4 14.2 0.0 C04SLm0141K23.1 17490 17630 (130090) C Gypsy00152 Gypsy (193) 5585 5425 13 4288 21.6 4.1 2.3 C04SLm0141K23.1 17886 19109 (128611) C Gypsy00152 Gypsy (754) 5024 3779 13 242 30.0 8.0 1.8 C04SLm0141K23.1 19165 19276 (128444) C Gypsy00003 Gypsy (3897) 4496 4378 14 256 21.1 0.0 0.0 C04SLm0141K23.1 19186 19237 (128483) + Gypsy00151 Gypsy 6764 6815 (4834) 15 556 32.4 2.5 2.1 C04SLm0141K23.1 19302 19582 (128138) C Gypsy00114 Gypsy (2125) 5817 5536 16 602 32.4 0.5 0.0 C04SLm0141K23.1 19315 19527 (128193) + Gypsy00112 Gypsy 1432 1645 (6035) 17 4516 21.7 4.4 5.0 C04SLm0141K23.1 19574 20995 (126725) C Gypsy00152 Gypsy (4057) 1721 308 18 * 4624 23.6 6.4 5.2 C04SLm0141K23.1 20182 22297 (125423) + Gypsy00063 Gypsy 3597 8080 (5335) 19 2257 21.0 5.4 2.5 C04SLm0141K23.1 22294 23153 (124567) + Gypsy00140 Gypsy 5309 8878 (963) 20 * 304 25.7 0.0 0.0 C04SLm0141K23.1 23221 23294 (124426) + Gypsy00140 Gypsy 5971 6044 (983) 21 * 391 19.0 1.5 0.7 C04SLm0141K23.1 23274 23370 (124350) + Gypsy00140 Gypsy 1648 6044 (983) 21 3078 23.0 1.5 2.3 C04SLm0141K23.1 23687 24634 (123086) C Gypsy00152 Gypsy (754) 5024 4085 22 828 28.2 2.3 3.3 C04SLm0141K23.1 24629 25148 (122572) + Unknown00002 Unknown 1365 1879 (8102) 23 * 316 25.0 5.3 4.6 C04SLm0141K23.1 25529 25679 (122041) C Gypsy00038 Gypsy (2365) 5353 5202 24 * 383 28.2 4.4 6.1 C04SLm0141K23.1 25578 25758 (121962) C Unknown00045 Unknown (250) 4274 4097 25 * 1175 25.7 5.4 3.7 C04SLm0141K23.1 25737 26285 (121435) + Unknown00052 Unknown 852 3252 (1857) 26 484 27.4 5.8 6.7 C04SLm0141K23.1 27150 27477 (120243) + Unknown00002 Unknown 9029 9353 (628) 27 2848 26.0 5.3 5.2 C04SLm0141K23.1 27988 31503 (116217) + Unknown00002 Unknown 7 4666 (3) 28 442 24.0 7.2 3.0 C04SLm0141K23.1 32325 32553 (115167) + Gypsy00197 Gypsy 6551 8325 (616) 29 418 26.2 6.8 2.8 C04SLm0141K23.1 32390 32566 (115154) + Unknown00002 Unknown 9039 9222 (759) 30 * 1324 16.3 2.6 0.0 C04SLm0141K23.1 33327 33596 (114124) + Gypsy00080 Gypsy 1346 1622 (8324) 31 * 8260 21.1 1.7 4.4 C04SLm0141K23.1 33596 35924 (111796) C Unknown00025 Unknown (772) 5536 3272 32 5735 20.3 6.0 2.0 C04SLm0141K23.1 35893 37449 (110271) + Gypsy00046 Gypsy 553 5662 (4284) 33 * 839 29.2 1.5 2.0 C04SLm0141K23.1 37433 37775 (109945) C Unknown00054 Unknown (3346) 2145 1805 34 * 519 26.0 5.9 7.5 C04SLm0141K23.1 37697 37950 (109770) + Unknown00045 Unknown 4015 4264 (260) 35 * 3868 21.0 1.7 3.2 C04SLm0141K23.1 38458 39640 (108080) C Unknown00056 Unknown (0) 5491 1 36 20834 20.6 0.8 0.9 C04SLm0141K23.1 40271 44718 (103002) + Gypsy00202 Gypsy 9404 13846 (589) 37 10899 17.5 2.4 3.0 C04SLm0141K23.1 44688 47145 (100575) + Gypsy00057 Gypsy 7 9530 (26) 38 * 27456 18.0 2.5 2.2 C04SLm0141K23.1 47147 52900 (94820) C Gypsy00097 Gypsy (3973) 5540 1 39 2551 19.9 1.2 2.8 C04SLm0141K23.1 52904 53549 (94171) + Gypsy00046 Gypsy 9054 9689 (1382) 40 * 4257 21.8 1.5 3.1 C04SLm0141K23.1 53546 54624 (93096) C Unknown00025 Unknown (2952) 3356 2295 41 688 16.8 4.6 2.0 C04SLm0141K23.1 54610 54804 (92916) + Gypsy00080 Gypsy 1618 1817 (8129) 42 * 1065 19.7 6.3 11.0 C04SLm0141K23.1 54805 55268 (92452) C Gypsy00110 Gypsy (10) 9190 5745 43 1201 12.0 1.6 0.0 C04SLm0141K23.1 55024 55206 (92514) + Gypsy00164 Gypsy 8435 8620 (275) 44 8809 6.5 0.4 0.3 C04SLm0141K23.1 55257 56416 (91304) C Gypsy00106 Gypsy (251) 5716 4555 45 * 18855 17.9 4.7 4.4 C04SLm0141K23.1 55717 60138 (87582) + Gypsy00076 Gypsy 2 4435 (4891) 46 * 31598 11.1 0.6 0.4 C04SLm0141K23.1 56415 63526 (84194) C Gypsy00013 Gypsy (417) 7995 434 47 30464 22.0 3.8 2.9 C04SLm0141K23.1 63527 73467 (74253) + Gypsy00029 Gypsy 5 8291 (1) 48 8296 21.6 2.3 4.2 C04SLm0141K23.1 71712 74995 (72725) C Unknown00025 Unknown (783) 5525 2312 49 * 726 26.6 6.6 0.9 C04SLm0141K23.1 75009 75453 (72267) + Unknown00052 Unknown 1 9978 (3) 50 * 3134 20.9 5.8 4.8 C04SLm0141K23.1 75452 76450 (71270) C Unknown00002 Unknown (2978) 7003 5995 51 345 20.6 3.8 11.9 C04SLm0141K23.1 76308 76467 (71253) + Gypsy00025 Gypsy 101 247 (8079) 52 * 3140 27.5 6.4 6.8 C04SLm0141K23.1 76470 79321 (68399) C Unknown00056 Unknown (2202) 2907 114 53 * 5073 24.6 4.0 4.3 C04SLm0141K23.1 77891 79894 (67826) + Unknown00016 Unknown 346 2343 (2638) 54 * 8683 21.7 2.0 3.9 C04SLm0141K23.1 79894 83757 (63963) + Gypsy00029 Gypsy 1 3352 (5275) 55 * 21785 23.8 2.7 2.9 C04SLm0141K23.1 83755 89970 (57750) + Gypsy00115 Gypsy 1539 7741 (242) 56 1365 21.9 2.2 1.7 C04SLm0141K23.1 89975 90383 (57337) C Gypsy00177 Gypsy (3615) 6690 6280 57 * 1650 27.2 7.8 6.5 C04SLm0141K23.1 90248 91301 (56419) + Gypsy00046 Gypsy 141 1208 (9863) 58 24028 19.9 1.2 1.4 C04SLm0141K23.1 91363 96441 (51279) C Gypsy00181 Gypsy (1113) 5597 529 59 4936 20.8 8.7 3.7 C04SLm0141K23.1 96474 98539 (49181) + Unknown00002 Unknown 4764 6984 (2997) 60 226 12.3 6.8 12.2 C04SLm0141K23.1 98817 98890 (48830) C Unknown00016 Unknown (4643) 338 269 61 247 5.0 5.0 0.0 C04SLm0141K23.1 98819 98858 (48862) + Unknown00054 Unknown 630 671 (4820) 62 661 28.5 3.2 1.4 C04SLm0141K23.1 99538 99818 (47902) + Unknown00045 Unknown 2016 2301 (2223) 63 * 9395 25.9 5.0 4.2 C04SLm0141K23.1 99567 103455 (44265) C Unknown00056 Unknown (0) 5109 1190 64 2516 23.1 1.4 1.5 C04SLm0141K23.1 103453 104237 (43483) C Unknown00052 Unknown (0) 5491 3667 65 * 1610 20.7 4.7 4.4 C04SLm0141K23.1 104381 104930 (42790) C Unknown00054 Unknown (765) 4726 4175 66 564 18.7 10.7 3.6 C04SLm0141K23.1 104931 105263 (42457) C Unknown00002 Unknown (5221) 4760 4383 67 * 628 27.0 1.5 1.0 C04SLm0141K23.1 105239 105436 (42284) C Unknown00002 Unknown (772) 9209 9011 67 534 24.0 6.1 3.1 C04SLm0141K23.1 105244 105471 (42249) + Unknown00045 Unknown 2025 2259 (2265) 68 * 245 27.8 0.9 2.7 C04SLm0141K23.1 108019 108129 (39591) C Gypsy00046 Gypsy (9751) 1320 1212 69 355 26.3 6.7 8.3 C04SLm0141K23.1 108132 108385 (39335) C Unknown00002 Unknown (2236) 3266 2625 70 240 29.3 0.0 1.2 C04SLm0141K23.1 108322 108404 (39316) + Gypsy00142 Gypsy 7655 7736 (329) 71 * 470 30.5 2.4 0.0 C04SLm0141K23.1 108745 108957 (38763) C Gypsy00177 Gypsy (10073) 232 15 72 263 25.1 7.7 6.6 C04SLm0141K23.1 108827 109009 (38711) C Unknown00002 Unknown (7343) 2638 2454 70 * 443 29.1 7.0 3.2 C04SLm0141K23.1 109526 109841 (37879) C Gypsy00177 Gypsy (45) 10260 9933 73 * 2158 25.4 5.1 3.5 C04SLm0141K23.1 109700 110870 (36850) C Unknown00002 Unknown (3052) 6929 5694 74 302 10.9 4.7 0.0 C04SLm0141K23.1 110888 110951 (36769) C Unknown00002 Unknown (5361) 4620 4554 75 545 18.9 0.7 2.9 C04SLm0141K23.1 111009 111144 (36576) C Unknown00002 Unknown (4164) 5817 5685 76 892 19.1 6.6 0.4 C04SLm0141K23.1 111153 111378 (36342) C Unknown00002 Unknown (5361) 4620 4381 76 825 22.2 2.3 2.8 C04SLm0141K23.1 112013 112272 (35448) C Unknown00054 Unknown (476) 5015 1 77 1613 21.1 4.1 4.0 C04SLm0141K23.1 112386 112966 (34754) C Unknown00054 Unknown (735) 4756 4175 78 1461 20.1 5.7 3.8 C04SLm0141K23.1 112968 113506 (34214) C Unknown00002 Unknown (549) 9432 4383 79 639 23.7 9.6 6.2 C04SLm0141K23.1 113207 113611 (34109) + Unknown00045 Unknown 1897 2315 (2209) 80 * 1030 16.4 8.4 0.4 C04SLm0141K23.1 115961 116187 (31533) C Unknown00002 Unknown (5356) 4625 4381 81 482 30.1 7.7 7.2 C04SLm0141K23.1 117501 117905 (29815) C Gypsy00202 Gypsy (5778) 8657 8251 82 * 1480 29.6 7.3 5.2 C04SLm0141K23.1 117559 118672 (29048) C Unknown00002 Unknown (1780) 8201 7065 83 1530 18.5 3.5 5.6 C04SLm0141K23.1 119124 119518 (28202) C Unknown00002 Unknown (3029) 6952 6566 84 1177 21.3 10.7 3.5 C04SLm0141K23.1 119508 119939 (27781) C Unknown00002 Unknown (3524) 6457 5995 84 * 1338 25.4 4.8 2.7 C04SLm0141K23.1 119777 120257 (27463) + Gypsy00038 Gypsy 6485 6975 (743) 85 * 2112 21.0 3.0 2.8 C04SLm0141K23.1 120000 120598 (27122) C Unknown00002 Unknown (4111) 5870 5271 84 520 22.6 1.5 0.0 C04SLm0141K23.1 120719 120855 (26865) C Gypsy00177 Gypsy (6414) 3891 3753 86 498 32.5 1.0 2.0 C04SLm0141K23.1 122034 122337 (25383) C Unknown00052 Unknown (3682) 987 687 87 360 21.1 6.2 4.7 C04SLm0141K23.1 124950 125078 (22642) + Gypsy00042 Gypsy 205 335 (7163) 88 2246 32.0 3.2 1.5 C04SLm0141K23.1 125706 127001 (20719) + Gypsy00017 Gypsy 1920 3311 (1718) 89 1673 24.4 5.5 5.2 C04SLm0141K23.1 127038 127877 (19843) + Gypsy00038 Gypsy 5209 6050 (1668) 90 1007 8.4 0.7 0.0 C04SLm0141K23.1 127888 128029 (19691) C Gypsy00063 Gypsy (1145) 9781 9639 91 * 11644 10.8 0.9 0.2 C04SLm0141K23.1 128027 129721 (17999) + Gypsy00172 Gypsy 1299 3006 (2907) 92 * 13013 16.6 4.0 3.0 C04SLm0141K23.1 128658 131215 (16505) C Unknown00048 Unknown (845) 3181 597 93 9520 26.5 2.4 1.7 C04SLm0141K23.1 131224 134190 (13530) C Gypsy00202 Gypsy (1117) 13318 10333 94 3432 22.3 3.5 1.8 C04SLm0141K23.1 134183 135288 (12432) + Gypsy00152 Gypsy 4106 5230 (548) 95 * 4716 23.4 5.9 5.8 C04SLm0141K23.1 134607 136578 (11142) C Gypsy00140 Gypsy (4) 7023 5050 96 2669 21.7 2.2 5.8 C04SLm0141K23.1 136570 137357 (10363) C Gypsy00140 Gypsy (2155) 4872 4114 96 * 4743 28.5 5.4 5.6 C04SLm0141K23.1 137393 142055 (5665) C Gypsy00140 Gypsy (4) 7023 1535 97 5529 21.1 3.0 1.9 C04SLm0141K23.1 139328 140768 (6952) + Gypsy00152 Gypsy 3773 5230 (548) 98 3485 20.6 2.0 5.0 C04SLm0141K23.1 142049 142973 (4747) C Gypsy00140 Gypsy (2155) 4872 3975 99 943 18.4 4.7 3.1 C04SLm0141K23.1 142979 143236 (4484) C Gypsy00180 Gypsy (7087) 6328 6067 100 701 16.6 2.5 3.1 C04SLm0141K23.1 143173 143334 (4386) + Gypsy00152 Gypsy 947 1107 (4671) 101 * 3327 25.5 1.9 0.9 C04SLm0141K23.1 143346 144248 (3472) + Gypsy00086 Gypsy 4833 5744 (1739) 102 2840 27.0 5.7 4.6 C04SLm0141K23.1 144250 145825 (1895) + Gypsy00038 Gypsy 4973 7226 (272) 103 796 34.5 5.7 0.5 C04SLm0141K23.1 145802 146220 (1500) + Gypsy00017 Gypsy 1544 1984 (3045) 104 * 301 26.1 7.6 0.0 C04SLm0141K23.1 146237 146328 (1392) C Gypsy00205 Gypsy (1596) 9716 9618 105 3055 32.9 2.3 1.0 C04SLm0141K23.1 146528 147720 (0) + Gypsy00017 Gypsy 2370 3577 (1452) 104