##gff-version 3
##sequence-region C04HBa0164O03.1 1 126020
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	1	851	3641	-	0	ID=Contig409_alignment_1;Target=Contig409 250 1098 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	357	3107	16791	+	0	ID=Contig4_alignment_1;Target=Contig4 3676 6428 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	3078	4139	4120	+	0	ID=Contig4_alignment_2;Target=Contig4 7643 8730 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	3761	4251	2007	+	0	ID=Contig4_alignment_3;Target=Contig4 8232 8732 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	3922	4362	1914	+	0	ID=Contig4_alignment_4;Target=Contig4 8288 8732 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	4156	4398	1126	+	0	ID=Contig4_alignment_5;Target=Contig4 8301 8545 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	4400	4965	1637	+	0	ID=Contig4_alignment_6;Target=Contig4 8698 9269 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	4593	5348	3218	-	0	ID=Contig1546_alignment_1;Target=Contig1546 1 771 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	4738	5657	4355	-	0	ID=Contig58_alignment_1;Target=Contig58 3218 4143 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	5376	8278	19864	+	0	ID=Contig4_alignment_7;Target=Contig4 1 2914 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	8346	8990	3265	+	0	ID=Contig4_alignment_8;Target=Contig4 3742 4381 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	8988	11143	11680	+	0	ID=Contig58_alignment_2;Target=Contig58 947 3120 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	11151	11186	229	+	0	ID=hind_R%3D2244_alignment_1;Target=hind_R%3D2244 114 149 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	11181	11473	938	+	0	ID=hind_R%3D2244_alignment_2;Target=hind_R%3D2244 191 471 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	12261	12515	947	+	0	ID=eco_R%3D414_alignment_1;Target=eco_R%3D414 1 270 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	12451	12624	589	+	0	ID=eco_R%3D414_alignment_2;Target=eco_R%3D414 94 267 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	12738	17675	11568	-	0	ID=Contig4_alignment_9;Target=Contig4 3203 8105 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	17754	17874	378	-	0	ID=Contig1374_alignment_1;Target=Contig1374 122 243 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	17948	18556	923	+	0	ID=Contig390_alignment_1;Target=Contig390 6071 6688 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	22008	22108	577	-	0	ID=Contig1977_alignment_1;Target=Contig1977 1 102 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	26498	26716	398	+	0	ID=Contig496_alignment_1;Target=Contig496 196 415 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	26830	27044	390	+	0	ID=Contig32_alignment_1;Target=Contig32 2021 2242 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	28456	30996	12058	-	0	ID=Contig381_alignment_1;Target=Contig381 645 3135 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	30329	31248	5864	-	0	ID=Contig381_alignment_2;Target=Contig381 471 1391 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	31224	31954	4065	+	0	ID=Contig218_alignment_1;Target=Contig218 532 1287 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	31256	31954	3991	+	0	ID=Contig218_alignment_2;Target=Contig218 565 1287 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	34371	34979	1978	-	0	ID=Contig406_alignment_1;Target=Contig406 60 755 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	34974	35413	1717	-	0	ID=Contig598_alignment_1;Target=Contig598 904 1365 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	35548	36028	1801	+	0	ID=Contig1261_alignment_1;Target=Contig1261 424 932 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	35987	43041	34927	+	0	ID=Contig89_alignment_1;Target=Contig89 17 7061 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	42011	43222	3143	+	0	ID=Contig46_alignment_1;Target=Contig46 1 1221 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	43220	43838	3612	-	0	ID=Contig390_alignment_2;Target=Contig390 1 624 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	43870	44796	4248	+	0	ID=Contig1261_alignment_2;Target=Contig1261 1 965 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	44718	47653	14175	+	0	ID=Contig89_alignment_2;Target=Contig89 13 2959 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	48334	48416	331	+	0	ID=Contig50_alignment_1;Target=Contig50 37 119 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	48487	49021	1480	+	0	ID=Contig2030_alignment_1;Target=Contig2030 531 1072 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	48694	49078	1222	+	0	ID=Contig378_alignment_1;Target=Contig378 1 398 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	49193	49318	319	+	0	ID=Contig1060_alignment_1;Target=Contig1060 524 648 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	49212	49328	324	+	0	ID=Contig419_alignment_1;Target=Contig419 22 138 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	49329	49826	914	-	0	ID=Contig1208_alignment_1;Target=Contig1208 125 654 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	49329	49758	950	-	0	ID=hind_R%3D2099_alignment_1;Target=hind_R%3D2099 3 444 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	49863	49926	227	+	0	ID=Contig1055_alignment_1;Target=Contig1055 19 88 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	49881	50439	1375	-	0	ID=Contig661_alignment_1;Target=Contig661 1 557 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	50042	50638	1928	-	0	ID=Contig361_alignment_1;Target=Contig361 6 608 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	50647	50715	270	+	0	ID=eco_R%3D1260_alignment_1;Target=eco_R%3D1260 330 395 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	50658	51126	871	+	0	ID=Contig537_alignment_1;Target=Contig537 1 478 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	51095	51246	324	-	0	ID=Contig44_alignment_1;Target=Contig44 59 211 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	51194	51628	852	-	0	ID=Contig578_alignment_1;Target=Contig578 62 516 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	51378	52467	3334	-	0	ID=Contig1233_alignment_1;Target=Contig1233 2 1108 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	51941	52603	2242	-	0	ID=Contig134_alignment_1;Target=Contig134 3412 4080 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	52594	53755	2744	+	0	ID=Contig390_alignment_3;Target=Contig390 1373 2558 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	52594	53551	2903	-	0	ID=Contig134_alignment_2;Target=Contig134 1866 2831 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	53750	55235	6037	+	0	ID=Contig1200_alignment_1;Target=Contig1200 519 2026 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	56903	57081	335	+	0	ID=Contig95_alignment_1;Target=Contig95 263 440 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	57561	57655	235	-	0	ID=Contig406_alignment_2;Target=Contig406 482 573 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	57586	57998	1458	-	0	ID=Contig406_alignment_3;Target=Contig406 194 607 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	58912	58993	356	+	0	ID=Contig50_alignment_2;Target=Contig50 40 121 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	59062	59655	1170	+	0	ID=Contig2030_alignment_2;Target=Contig2030 531 1138 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	59265	59894	1323	+	0	ID=Contig378_alignment_2;Target=Contig378 1 652 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	59910	60499	995	-	0	ID=Contig1233_alignment_2;Target=Contig1233 2654 3248 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	60518	61008	1493	-	0	ID=Contig661_alignment_2;Target=Contig661 1 507 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	60601	61207	1970	-	0	ID=Contig361_alignment_2;Target=Contig361 6 608 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	61227	61666	1006	+	0	ID=Contig537_alignment_2;Target=Contig537 1 440 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	61677	61789	443	-	0	ID=Contig2030_alignment_3;Target=Contig2030 387 497 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	61792	62167	1541	-	0	ID=Contig1233_alignment_3;Target=Contig1233 4 380 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	61812	62293	254	-	0	ID=Contig1833_alignment_1;Target=Contig1833 6406 6897 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	62287	63445	3129	-	0	ID=Contig134_alignment_3;Target=Contig134 1664 2832 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	62511	64347	2941	-	0	ID=Contig134_alignment_4;Target=Contig134 723 2608 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	63455	64914	5692	+	0	ID=Contig1200_alignment_2;Target=Contig1200 513 2001 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	65233	65402	327	+	0	ID=Contig80_alignment_1;Target=Contig80 331 500 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	68818	69124	853	+	0	ID=Contig134_alignment_5;Target=Contig134 4365 4684 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	68955	70911	9341	-	0	ID=Contig390_alignment_4;Target=Contig390 4892 6881 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	72545	72649	389	-	0	ID=Contig1374_alignment_2;Target=Contig1374 122 224 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	72731	73371	1181	+	0	ID=Contig390_alignment_5;Target=Contig390 6078 6695 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	74176	75131	3175	-	0	ID=Contig218_alignment_3;Target=Contig218 318 1295 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	75083	75296	1109	+	0	ID=Contig102_alignment_1;Target=Contig102 1 214 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	75493	76237	3880	+	0	ID=Contig381_alignment_3;Target=Contig381 646 1399 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	76240	77442	6607	+	0	ID=Contig128_alignment_1;Target=Contig128 1 1241 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	76560	77580	5738	+	0	ID=Contig381_alignment_4;Target=Contig381 1444 2494 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	77311	77946	3164	-	0	ID=Contig360_alignment_1;Target=Contig360 888 1524 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	77545	78133	2390	+	0	ID=Contig381_alignment_5;Target=Contig381 2523 3080 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	78754	87628	56582	+	0	ID=Contig1833_alignment_2;Target=Contig1833 164 9030 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	90557	90658	392	+	0	ID=Contig2591_alignment_1;Target=Contig2591 419 518 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	91153	91202	295	-	0	ID=Contig1977_alignment_2;Target=Contig1977 52 101 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	92464	94762	10302	+	0	ID=Contig1233_alignment_4;Target=Contig1233 208 2513 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	93766	95551	5904	+	0	ID=Contig1233_alignment_5;Target=Contig1233 1514 3248 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	95562	95713	809	+	0	ID=hind_R%3D494_alignment_1;Target=hind_R%3D494 199 351 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	95718	96190	1284	-	0	ID=Contig361_alignment_3;Target=Contig361 8 491 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	96206	96779	1054	+	0	ID=Contig537_alignment_3;Target=Contig537 1 571 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	96513	96879	589	-	0	ID=Contig1060_alignment_2;Target=Contig1060 3 367 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	96745	96973	379	-	0	ID=Contig578_alignment_2;Target=Contig578 289 516 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	96984	97994	3437	-	0	ID=Contig1233_alignment_6;Target=Contig1233 2 1027 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	97390	98127	2292	-	0	ID=Contig134_alignment_6;Target=Contig134 3415 4154 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	98121	100200	4060	+	0	ID=Contig390_alignment_6;Target=Contig390 1373 3496 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	98823	100334	6195	+	0	ID=Contig1200_alignment_3;Target=Contig1200 1 1560 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	100319	100697	772	+	0	ID=Contig1200_alignment_4;Target=Contig1200 1626 2020 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	102341	102510	441	+	0	ID=Contig95_alignment_2;Target=Contig95 265 433 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	108800	108937	597	+	0	ID=Contig2591_alignment_2;Target=Contig2591 382 518 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	109372	109471	457	-	0	ID=Contig1977_alignment_3;Target=Contig1977 5 102 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	109784	109901	779	-	0	ID=Contig390_alignment_7;Target=Contig390 4892 5009 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	111503	111628	345	-	0	ID=Contig1374_alignment_3;Target=Contig1374 122 245 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	111697	112344	922	+	0	ID=Contig390_alignment_8;Target=Contig390 6063 6688 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	116673	116773	353	+	0	ID=Contig2591_alignment_3;Target=Contig2591 419 518 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	118760	121763	11862	+	0	ID=Contig1233_alignment_7;Target=Contig1233 222 3248 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	121673	121774	440	-	0	ID=Contig1200_alignment_5;Target=Contig1200 2852 2957 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	121774	122082	1484	+	0	ID=hind_R%3D494_alignment_2;Target=hind_R%3D494 198 524 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	122114	122274	534	+	0	ID=hind_R%3D494_alignment_3;Target=hind_R%3D494 506 667 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	122379	122692	571	-	0	ID=Contig406_alignment_4;Target=Contig406 482 777 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	122525	123049	1827	-	0	ID=Contig406_alignment_5;Target=Contig406 184 726 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	123970	124073	574	+	0	ID=Contig81_alignment_1;Target=Contig81 11 114 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	124148	124429	1601	-	0	ID=Contig81_alignment_2;Target=Contig81 1 292 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	124462	124593	264	-	0	ID=Contig121_alignment_1;Target=Contig121 11 144 -
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	124697	125036	1068	+	0	ID=Contig2030_alignment_4;Target=Contig2030 552 906 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	124884	125511	1304	+	0	ID=Contig378_alignment_3;Target=Contig378 1 654 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	125511	125649	617	+	0	ID=Contig1200_alignment_6;Target=Contig1200 2848 2987 +
C04HBa0164O03.1	RepeatMasker	nucleotide_motif	125526	126020	1184	-	0	ID=Contig1233_alignment_8;Target=Contig1233 2759 3248 -