SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 6761 22.0 5.3 3.9 C04HBa0207P16.1 1 2352 (98670) C Gypsy00180 Gypsy (4939) 8476 5900 1 5919 18.1 3.0 5.7 C04HBa0207P16.1 1510 2964 (98058) + Gypsy00152 Gypsy 307 1721 (4057) 2 * 543 31.1 1.1 1.9 C04HBa0207P16.1 2956 3217 (97805) + Gypsy00091 Gypsy 6638 6897 (1650) 3 * 250 24.2 3.0 2.1 C04HBa0207P16.1 3261 3374 (97648) + Gypsy00210 Gypsy 4383 5892 (2041) 4 255 23.2 0.0 0.0 C04HBa0207P16.1 3299 3354 (97668) C Gypsy00142 Gypsy (5324) 2741 2686 5 3361 20.3 3.4 2.4 C04HBa0207P16.1 3436 4299 (96723) + Gypsy00152 Gypsy 3779 4650 (1128) 6 * 4626 22.9 7.1 6.2 C04HBa0207P16.1 4186 8236 (92786) C Gypsy00140 Gypsy (4) 8175 3433 7 356 26.0 4.9 9.9 C04HBa0207P16.1 8250 8411 (92611) + Copia00089 Copia 3680 3833 (7623) 8 484 25.2 0.0 3.0 C04HBa0207P16.1 8913 9043 (91979) + Gypsy00107 Gypsy 8835 8961 (1938) 9 4680 11.4 3.1 0.9 C04HBa0207P16.1 9343 10110 (90912) + GYLES1_LTR Unknown 1 785 (0) 10 * 10952 18.2 1.3 2.5 C04HBa0207P16.1 9749 10110 (90912) + Gypsy00157 Gypsy 3 2105 (2858) 11 12750 11.6 0.1 0.0 C04HBa0207P16.1 10111 11916 (89106) + GYLES1_I Unknown 1 1807 (2824) 12 1594 22.8 0.9 0.0 C04HBa0207P16.1 11929 12787 (88235) C Gypsy00205 Gypsy (8115) 3197 2855 13 1583 23.3 1.4 0.1 C04HBa0207P16.1 12820 14842 (86180) C Gypsy00205 Gypsy (8115) 3197 2855 14 1550 24.4 0.6 0.0 C04HBa0207P16.1 14822 15198 (85824) C Gypsy00205 Gypsy (8115) 3197 2858 14 * 1439 23.2 1.2 0.0 C04HBa0207P16.1 15194 15546 (85476) C Gypsy00205 Gypsy (8116) 3196 2857 14 * 14859 7.4 0.0 0.5 C04HBa0207P16.1 15548 17420 (83602) + Gypsy00204 Gypsy 2069 3931 (0) 15 6492 11.4 2.3 2.3 C04HBa0207P16.1 16726 17752 (83270) C Gypsy00205 Gypsy (4087) 7225 6199 16 * 1583 24.2 1.1 0.0 C04HBa0207P16.1 17757 18252 (82770) C Gypsy00205 Gypsy (8098) 3214 2853 17 1549 22.2 1.5 0.8 C04HBa0207P16.1 18232 19522 (81500) C Gypsy00205 Gypsy (8102) 3210 2857 17 * 1395 24.0 0.9 0.0 C04HBa0207P16.1 19502 19822 (81200) C Gypsy00205 Gypsy (8115) 3197 2874 17 * 1624 23.2 0.9 0.0 C04HBa0207P16.1 19819 20527 (80495) C Gypsy00205 Gypsy (8115) 3197 2845 18 1503 24.2 1.1 0.0 C04HBa0207P16.1 20549 22323 (78699) C Gypsy00205 Gypsy (8115) 3197 2845 18 1609 21.5 0.9 0.0 C04HBa0207P16.1 22346 23313 (77709) C Gypsy00205 Gypsy (8115) 3197 2845 18 1506 25.3 1.0 0.2 C04HBa0207P16.1 23333 23844 (77178) C Gypsy00205 Gypsy (8102) 3210 2855 18 1428 24.3 1.6 0.1 C04HBa0207P16.1 23876 24518 (76504) C Gypsy00205 Gypsy (8102) 3210 2857 19 1555 23.9 1.1 0.2 C04HBa0207P16.1 24551 25904 (75118) C Gypsy00205 Gypsy (8102) 3210 2845 20 1584 19.0 1.9 0.0 C04HBa0207P16.1 25927 26286 (74736) C Gypsy00205 Gypsy (8116) 3196 2857 20 1508 20.0 1.9 0.0 C04HBa0207P16.1 26291 26655 (74367) C Gypsy00205 Gypsy (8115) 3197 2857 20 1541 21.9 1.7 0.5 C04HBa0207P16.1 26688 27562 (73460) C Gypsy00205 Gypsy (8115) 3197 2845 21 519 26.1 4.5 6.4 C04HBa0207P16.1 27610 27875 (73147) + Copia00089 Copia 3572 3832 (7624) 22 478 27.4 2.7 0.7 C04HBa0207P16.1 29214 29360 (71662) + Gypsy00006 Gypsy 2515 2664 (5115) 23 * 2920 32.4 4.0 3.9 C04HBa0207P16.1 29229 32314 (68708) C Gypsy00032 Gypsy (2) 5824 2739 24 5316 27.6 3.6 2.5 C04HBa0207P16.1 32325 34223 (66799) C Gypsy00177 Gypsy (7502) 2803 884 25 232 25.8 13.9 1.6 C04HBa0207P16.1 35012 35133 (65889) C Gypsy00079 Gypsy (208) 5103 4967 26 231 22.4 1.7 1.7 C04HBa0207P16.1 35119 35177 (65845) + Copia00089 Copia 3472 3530 (7926) 27 * 3543 19.4 6.0 3.2 C04HBa0207P16.1 35320 36395 (64627) + Gypsy00152 Gypsy 4125 5229 (549) 28 * 6792 22.6 6.1 5.4 C04HBa0207P16.1 35730 39873 (61149) C Gypsy00180 Gypsy (4) 8080 4075 29 5484 19.7 2.5 5.2 C04HBa0207P16.1 39032 40484 (60538) + Gypsy00152 Gypsy 307 1721 (4057) 30 * 532 31.8 0.8 1.5 C04HBa0207P16.1 40476 40737 (60285) + Gypsy00091 Gypsy 6638 6897 (1650) 31 * 287 20.2 4.2 3.7 C04HBa0207P16.1 40781 40904 (60118) + Gypsy00058 Gypsy 4383 6779 (1968) 32 4882 21.5 5.1 1.7 C04HBa0207P16.1 40956 42358 (58664) + Gypsy00152 Gypsy 3779 5229 (549) 33 4644 23.8 7.2 7.1 C04HBa0207P16.1 41695 45326 (55696) C Gypsy00180 Gypsy (4) 7989 4075 34 * 2126 13.8 1.9 2.9 C04HBa0207P16.1 45352 45770 (55252) C Gypsy00063 Gypsy (6908) 4018 3604 35 313 33.1 0.0 4.9 C04HBa0207P16.1 45784 45945 (55077) + Copia00089 Copia 3680 3833 (7623) 36 492 26.0 0.0 3.0 C04HBa0207P16.1 46446 46576 (54446) + Gypsy00107 Gypsy 8835 8961 (1938) 37 536 21.7 3.0 6.5 C04HBa0207P16.1 46821 46988 (54034) + Gypsy00157 Gypsy 4799 4960 (3) 38 * 4582 13.0 2.9 0.8 C04HBa0207P16.1 46877 47645 (53377) + GYLES1_LTR Unknown 1 785 (0) 39 * 11127 17.6 1.4 2.6 C04HBa0207P16.1 47285 47645 (53377) + Gypsy00157 Gypsy 3 2105 (2858) 40 12943 11.4 0.0 0.0 C04HBa0207P16.1 47646 49452 (51570) + GYLES1_I Unknown 1 1807 (2824) 41 1541 23.8 0.6 0.0 C04HBa0207P16.1 49465 50166 (50856) C Gypsy00205 Gypsy (8115) 3197 2857 42 1516 21.1 1.2 0.0 C04HBa0207P16.1 50146 50482 (50540) C Gypsy00205 Gypsy (8115) 3197 2857 42 * 1448 21.6 1.2 0.0 C04HBa0207P16.1 50463 50781 (50241) C Gypsy00205 Gypsy (8116) 3196 2874 42 * 1401 24.9 0.9 0.0 C04HBa0207P16.1 50778 51168 (49854) C Gypsy00205 Gypsy (8115) 3197 2840 43 * 1444 21.8 2.5 0.0 C04HBa0207P16.1 51148 52249 (48773) C Gypsy00205 Gypsy (8115) 3197 2854 43 1403 25.0 1.2 0.3 C04HBa0207P16.1 52254 53483 (47539) C Gypsy00205 Gypsy (8102) 3210 2857 43 * 1457 23.8 1.2 1.7 C04HBa0207P16.1 53466 54048 (46974) C Gypsy00205 Gypsy (8100) 3212 2829 43 * 1620 23.5 1.5 0.1 C04HBa0207P16.1 54033 55473 (45549) C Gypsy00205 Gypsy (8115) 3197 2845 43 1493 24.2 0.9 0.0 C04HBa0207P16.1 55464 56108 (44914) C Gypsy00205 Gypsy (8115) 3197 2845 43 * 1585 23.1 1.0 1.0 C04HBa0207P16.1 56126 57867 (43155) C Gypsy00205 Gypsy (8100) 3212 2845 44 1481 24.2 1.1 0.0 C04HBa0207P16.1 57836 59228 (41794) C Gypsy00205 Gypsy (8102) 3210 2857 44 * 1552 21.2 0.8 2.0 C04HBa0207P16.1 59248 59919 (41103) C Gypsy00205 Gypsy (8102) 3210 2857 44 1522 22.2 1.7 0.4 C04HBa0207P16.1 59899 60711 (40311) C Gypsy00205 Gypsy (8115) 3197 2857 44 * 1481 23.4 1.5 0.2 C04HBa0207P16.1 60691 61765 (39257) C Gypsy00205 Gypsy (8102) 3210 2854 44 * 1390 24.6 1.5 0.3 C04HBa0207P16.1 61798 62136 (38886) C Gypsy00205 Gypsy (8115) 3197 2855 45 1410 24.7 1.8 0.0 C04HBa0207P16.1 62152 62659 (38363) C Gypsy00205 Gypsy (8100) 3212 2857 46 1464 24.8 1.2 0.1 C04HBa0207P16.1 62692 63766 (37256) C Gypsy00205 Gypsy (8102) 3210 2845 47 * 1475 25.1 1.2 0.1 C04HBa0207P16.1 63746 65029 (35993) C Gypsy00205 Gypsy (8102) 3210 2845 47 * 1497 23.2 1.1 0.1 C04HBa0207P16.1 65009 65452 (35570) C Gypsy00205 Gypsy (8115) 3197 2857 47 1509 24.0 1.3 0.0 C04HBa0207P16.1 65483 66345 (34677) C Gypsy00205 Gypsy (8102) 3210 2857 48 978 33.9 0.9 0.9 C04HBa0207P16.1 66386 66948 (34074) + PIGY-I_PS Unknown 3968 4530 (4718) 49 890 32.4 5.3 3.4 C04HBa0207P16.1 66949 67058 (33964) + Gypsy00118 Gypsy 671 1306 (5101) 50 280 8.7 4.2 4.2 C04HBa0207P16.1 67198 67245 (33777) C Gypsy00110 Gypsy (4040) 5160 5113 51 249 18.2 5.3 3.5 C04HBa0207P16.1 67199 67255 (33767) + Gypsy00066 Gypsy 7052 7109 (5199) 52 * 303 24.1 6.6 9.0 C04HBa0207P16.1 70341 70642 (30380) C Gypsy00170 Gypsy (6240) 6617 847 53 343 25.6 6.4 2.8 C04HBa0207P16.1 70374 70514 (30508) + Gypsy00053 Gypsy 4340 4485 (857) 54 259 10.7 0.0 11.1 C04HBa0207P16.1 72120 72182 (28840) C Unknown00008 Unknown (1455) 2998 2943 55 2825 23.8 6.3 5.7 C04HBa0207P16.1 72183 73293 (27729) C Gypsy00063 Gypsy (195) 5814 4142 56 1946 15.7 1.3 2.0 C04HBa0207P16.1 73293 73736 (27286) C Gypsy00063 Gypsy (3180) 4018 3604 56 * 370 32.7 0.0 5.0 C04HBa0207P16.1 73751 73911 (27111) + Copia00089 Copia 3681 3833 (7623) 57 503 25.2 0.0 3.0 C04HBa0207P16.1 74411 74541 (26481) + Gypsy00107 Gypsy 8835 8961 (1938) 58 305 28.1 4.8 5.2 C04HBa0207P16.1 74425 74672 (26350) + Unknown00038 Unknown 3409 3655 (5452) 59 * 4570 11.0 2.9 0.7 C04HBa0207P16.1 74842 75607 (25415) + GYLES1_LTR Unknown 1 783 (2) 60 * 10718 17.8 1.2 2.4 C04HBa0207P16.1 75249 75609 (25413) + Gypsy00157 Gypsy 3 2105 (2858) 61 12129 11.7 0.0 0.0 C04HBa0207P16.1 75610 77416 (23606) + GYLES1_I Unknown 1 1807 (2824) 62 1664 23.8 1.3 0.4 C04HBa0207P16.1 77429 79644 (21378) C Gypsy00205 Gypsy (8102) 3210 2829 63 1498 25.1 1.8 0.1 C04HBa0207P16.1 79629 80802 (20220) C Gypsy00205 Gypsy (8115) 3197 2857 63 * 1607 23.9 1.0 0.0 C04HBa0207P16.1 80783 81805 (19217) C Gypsy00205 Gypsy (8115) 3197 2857 63 1556 24.2 1.1 0.2 C04HBa0207P16.1 81838 83448 (17574) C Gypsy00205 Gypsy (8115) 3197 2857 64 1516 25.3 1.2 0.0 C04HBa0207P16.1 83481 84250 (16772) C Gypsy00205 Gypsy (8115) 3197 2845 65 1502 24.2 1.4 0.4 C04HBa0207P16.1 84219 87350 (13672) C Gypsy00205 Gypsy (8115) 3197 2845 65 * 1434 23.6 1.7 0.2 C04HBa0207P16.1 87331 87770 (13252) C Gypsy00205 Gypsy (8116) 3196 2855 65 * 1602 23.9 1.2 0.1 C04HBa0207P16.1 87750 90830 (10192) C Gypsy00205 Gypsy (8100) 3212 2849 65 1568 24.3 1.1 0.0 C04HBa0207P16.1 90810 92887 (8135) C Gypsy00205 Gypsy (8102) 3210 2845 65 * 1453 23.9 1.6 1.4 C04HBa0207P16.1 92868 93633 (7389) C Gypsy00205 Gypsy (8115) 3197 2857 65 * 1584 23.8 1.0 0.0 C04HBa0207P16.1 93613 95061 (5961) C Gypsy00205 Gypsy (8115) 3197 2855 65 1424 23.7 1.2 0.1 C04HBa0207P16.1 95093 95903 (5119) C Gypsy00205 Gypsy (8115) 3197 2845 66 1345 23.0 2.5 0.0 C04HBa0207P16.1 95884 96319 (4703) C Gypsy00205 Gypsy (8115) 3197 2857 66 * 1484 24.4 1.1 0.1 C04HBa0207P16.1 96300 97849 (3173) C Gypsy00205 Gypsy (8100) 3212 2857 66 * 1504 24.4 1.0 0.0 C04HBa0207P16.1 97840 98559 (2463) C Gypsy00205 Gypsy (8115) 3197 2845 67 1636 23.8 1.1 0.0 C04HBa0207P16.1 98580 100429 (593) C Gypsy00205 Gypsy (8115) 3197 2845 67 1304 27.1 0.9 0.0 C04HBa0207P16.1 100426 100761 (261) C Gypsy00205 Gypsy (8116) 3196 2858 67 * 646 35.5 0.0 0.0 C04HBa0207P16.1 100770 101020 (2) + Gypsy00118 Gypsy 605 855 (5552) 68