##gff-version 3
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	48	294	826	-	0	ID=hind_R%3D1250_alignment_1;Target=hind_R%3D1250 1 239 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	152	350	372	-	0	ID=Contig366_alignment_1;Target=Contig366 886 1082 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	1178	1330	397	-	0	ID=eco_R%3D1413_alignment_1;Target=eco_R%3D1413 3 147 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	2191	2373	483	+	0	ID=Contig49_alignment_1;Target=Contig49 7 185 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	2538	3150	884	+	0	ID=Contig49_alignment_2;Target=Contig49 1032 1640 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	3523	4089	1672	+	0	ID=Contig72_alignment_1;Target=Contig72 246 810 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	4093	4274	1057	-	0	ID=Contig1216_alignment_1;Target=Contig1216 3 208 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	4273	4615	2354	-	0	ID=Contig441_alignment_1;Target=Contig441 173 516 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	5098	5262	513	-	0	ID=Contig66_alignment_1;Target=Contig66 52 212 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	5193	5595	1056	+	0	ID=Contig16_alignment_1;Target=Contig16 3 411 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	5667	6405	1000	+	0	ID=Contig16_alignment_2;Target=Contig16 1556 2305 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	6460	6656	621	+	0	ID=Contig33_alignment_1;Target=Contig33 3138 3330 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	6669	6885	378	-	0	ID=hind_R%3D2637_alignment_1;Target=hind_R%3D2637 15 235 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	7542	7991	2013	+	0	ID=Contig46_alignment_1;Target=Contig46 2009 2466 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	7901	8594	4040	-	0	ID=Contig801_alignment_1;Target=Contig801 3 698 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	8565	8841	558	+	0	ID=Contig375_alignment_1;Target=Contig375 319 575 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	8727	8868	594	-	0	ID=Contig946_alignment_1;Target=Contig946 834 977 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	8858	8944	506	+	0	ID=Contig359_alignment_1;Target=Contig359 175 261 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	8977	9040	333	+	0	ID=Contig915_alignment_1;Target=Contig915 242 305 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	9012	9097	446	+	0	ID=Contig2561_alignment_1;Target=Contig2561 213 298 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	9059	9139	419	-	0	ID=Contig2561_alignment_2;Target=Contig2561 219 299 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	9101	9164	366	+	0	ID=Contig915_alignment_2;Target=Contig915 242 305 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	9137	9213	317	-	0	ID=Contig915_alignment_3;Target=Contig915 241 305 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	9140	9229	265	-	0	ID=Contig2561_alignment_3;Target=Contig2561 213 298 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	9237	9599	1396	+	0	ID=Contig1233_alignment_1;Target=Contig1233 2667 3018 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	9358	9818	1865	+	0	ID=hind_R%3D2631_alignment_1;Target=hind_R%3D2631 2 460 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	10241	10702	2030	+	0	ID=Contig1777_alignment_1;Target=Contig1777 1 443 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	10975	11154	513	+	0	ID=Contig1705_alignment_1;Target=Contig1705 116 304 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	11394	12232	4463	+	0	ID=Contig1233_alignment_2;Target=Contig1233 1690 2543 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	12301	12480	533	+	0	ID=Contig1705_alignment_2;Target=Contig1705 116 304 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	12588	13022	1303	+	0	ID=Contig1705_alignment_3;Target=Contig1705 303 745 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	12875	14596	2506	+	0	ID=Contig104_alignment_1;Target=Contig104 1 1705 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	14598	14648	312	+	0	ID=Contig104_alignment_2;Target=Contig104 1767 1817 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	14659	15705	3681	+	0	ID=Contig104_alignment_3;Target=Contig104 1995 3091 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	15748	15902	263	-	0	ID=Contig406_alignment_1;Target=Contig406 414 579 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	15768	15862	290	+	0	ID=Contig104_alignment_4;Target=Contig104 3315 3409 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	15899	16156	835	+	0	ID=Contig427_alignment_1;Target=Contig427 375 641 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	21522	21577	242	+	0	ID=hind_R%3D1420_alignment_1;Target=hind_R%3D1420 119 174 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	22043	23062	4531	+	0	ID=Contig134_alignment_1;Target=Contig134 2018 3040 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	23063	23152	515	+	0	ID=Contig134_alignment_2;Target=Contig134 3233 3322 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	23162	23877	1659	+	0	ID=Contig46_alignment_2;Target=Contig46 1063 1793 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	23323	26479	13691	+	0	ID=Contig1233_alignment_3;Target=Contig1233 1 3248 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	26394	26494	485	-	0	ID=Contig1200_alignment_1;Target=Contig1200 2848 2947 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	26901	27360	1874	+	0	ID=Contig1777_alignment_2;Target=Contig1777 1 443 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	27811	27992	626	+	0	ID=Contig1705_alignment_4;Target=Contig1705 116 304 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	28088	28520	1365	+	0	ID=Contig1705_alignment_5;Target=Contig1705 303 745 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	28319	28822	1748	+	0	ID=Contig43_alignment_1;Target=Contig43 832 1326 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	28373	29848	2337	+	0	ID=Contig104_alignment_5;Target=Contig104 1 1430 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	29860	30169	889	+	0	ID=Contig104_alignment_6;Target=Contig104 1395 1705 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	30171	30236	354	+	0	ID=Contig104_alignment_7;Target=Contig104 1767 1832 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	30283	30636	2955	+	0	ID=Contig598_alignment_1;Target=Contig598 530 885 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	30637	31642	3451	+	0	ID=Contig104_alignment_8;Target=Contig104 2043 3091 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	31685	31839	263	-	0	ID=Contig406_alignment_2;Target=Contig406 414 579 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	31705	31799	290	+	0	ID=Contig104_alignment_9;Target=Contig104 3315 3409 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	31836	32092	846	+	0	ID=Contig427_alignment_2;Target=Contig427 375 641 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	37882	38490	3086	+	0	ID=Contig134_alignment_3;Target=Contig134 2226 2838 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	38488	42879	32898	+	0	ID=Contig4_alignment_1;Target=Contig4 2804 7194 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	42944	43206	1865	+	0	ID=Contig469_alignment_1;Target=Contig469 2 262 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	43210	43257	332	+	0	ID=Contig390_alignment_1;Target=Contig390 4372 4419 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	43249	43356	733	+	0	ID=Contig360_alignment_1;Target=Contig360 247 360 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	43517	43722	689	-	0	ID=hind_R%3D1250_alignment_2;Target=hind_R%3D1250 1 198 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	43848	44076	1496	-	0	ID=Contig130_alignment_1;Target=Contig130 355 585 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	44071	44441	2421	+	0	ID=Contig1149_alignment_1;Target=Contig1149 353 719 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	44440	47661	17680	+	0	ID=Contig84_alignment_1;Target=Contig84 4387 7633 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	47732	48465	5238	+	0	ID=Contig1293_alignment_1;Target=Contig1293 1 736 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	48771	49372	656	+	0	ID=Contig1206_alignment_1;Target=Contig1206 747 1354 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	48930	49411	869	-	0	ID=Contig33_alignment_2;Target=Contig33 197 681 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	49062	49685	4381	+	0	ID=Contig62_alignment_1;Target=Contig62 1 628 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	50536	53544	21349	+	0	ID=Contig84_alignment_2;Target=Contig84 1 2981 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	53562	53923	2496	+	0	ID=Contig1149_alignment_2;Target=Contig1149 438 801 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	53900	54258	2222	-	0	ID=Contig130_alignment_2;Target=Contig130 1 359 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	54249	54847	4001	-	0	ID=Contig188_alignment_1;Target=Contig188 1 592 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	54892	54971	304	-	0	ID=Contig482_alignment_1;Target=Contig482 302 383 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	57409	57476	233	-	0	ID=hind_R%3D9729_alignment_1;Target=hind_R%3D9729 437 505 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	57610	57706	383	-	0	ID=Contig2591_alignment_1;Target=Contig2591 269 366 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	58681	58772	423	+	0	ID=Contig50_alignment_1;Target=Contig50 30 120 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	59533	59678	712	+	0	ID=Contig1200_alignment_2;Target=Contig1200 2847 2992 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	59549	60549	4594	-	0	ID=Contig1233_alignment_4;Target=Contig1233 2234 3248 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	60491	60716	980	-	0	ID=Contig419_alignment_1;Target=Contig419 289 517 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	60588	60865	1471	-	0	ID=Contig1233_alignment_5;Target=Contig1233 1791 2068 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	60772	60935	611	+	0	ID=Contig537_alignment_1;Target=Contig537 2 165 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	64014	64359	280	+	0	ID=Contig605_alignment_1;Target=Contig605 2013 2358 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	65275	65491	497	+	0	ID=Contig496_alignment_1;Target=Contig496 394 617 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	65278	65629	270	+	0	ID=Contig20_alignment_1;Target=Contig20 2607 2971 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	65354	65512	316	+	0	ID=Contig104_alignment_10;Target=Contig104 1332 1500 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	65594	65731	267	-	0	ID=Contig626_alignment_1;Target=Contig626 1384 1522 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	65928	66008	254	-	0	ID=Contig45_alignment_1;Target=Contig45 606 686 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	66125	66613	377	+	0	ID=hind_R%3D439_alignment_1;Target=hind_R%3D439 1 481 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	66369	66614	492	-	0	ID=Contig45_alignment_2;Target=Contig45 3 245 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	68076	68643	1756	+	0	ID=Contig46_alignment_3;Target=Contig46 2010 2561 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	68524	69026	2321	+	0	ID=Contig1736_alignment_1;Target=Contig1736 37 541 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	68524	68870	1624	+	0	ID=Contig1736_alignment_2;Target=Contig1736 37 383 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	68568	69084	1759	-	0	ID=Contig554_alignment_1;Target=Contig554 1 515 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	69089	69330	430	-	0	ID=Contig420_alignment_1;Target=Contig420 70 318 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	69144	69328	446	+	0	ID=Contig1180_alignment_1;Target=Contig1180 151 338 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	69410	69503	229	-	0	ID=Contig147_alignment_1;Target=Contig147 39 131 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	75488	76164	4470	-	0	ID=Contig494_alignment_1;Target=Contig494 1 667 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	75553	76251	785	+	0	ID=Contig494_alignment_2;Target=Contig494 1 661 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	78340	78469	587	+	0	ID=Contig469_alignment_2;Target=Contig469 493 623 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	78456	78691	1278	+	0	ID=Contig469_alignment_3;Target=Contig469 642 891 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	79719	79810	318	-	0	ID=Contig1667_alignment_1;Target=Contig1667 145 237 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	82678	83072	2913	+	0	ID=Contig17_alignment_1;Target=Contig17 10 410 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	83888	83940	265	-	0	ID=Contig372_alignment_1;Target=Contig372 948 1000 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	83908	84902	6967	-	0	ID=Contig372_alignment_2;Target=Contig372 3 1011 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	91215	91244	227	+	0	ID=Contig153_alignment_1;Target=Contig153 92 121 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	95129	95383	658	-	0	ID=Contig51_alignment_1;Target=Contig51 459 703 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	95598	95719	398	-	0	ID=Contig1193_alignment_1;Target=Contig1193 1 125 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	95618	95730	838	-	0	ID=Contig893_alignment_1;Target=Contig893 273 383 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	95954	96080	382	-	0	ID=Contig1591_alignment_1;Target=Contig1591 24 152 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	99592	99775	1451	+	0	ID=Contig1212_alignment_1;Target=Contig1212 1 184 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	108367	108405	225	-	0	ID=Contig2561_alignment_4;Target=Contig2561 211 249 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	108823	109113	2069	+	0	ID=Contig1836_alignment_1;Target=Contig1836 1 289 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	114118	114905	571	-	0	ID=Contig1263_alignment_1;Target=Contig1263 206 999 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	120427	120527	762	+	0	ID=Contig1268_alignment_1;Target=Contig1268 1 102 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	120794	120830	250	+	0	ID=eco_R%3D126_alignment_1;Target=eco_R%3D126 10 46 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	123313	123425	260	+	0	ID=Contig1269_alignment_1;Target=Contig1269 36 168 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	124175	124285	394	-	0	ID=Contig1454_alignment_1;Target=Contig1454 1 114 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	124962	125154	445	-	0	ID=Contig240_alignment_1;Target=Contig240 622 796 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	128971	129053	322	+	0	ID=Contig1660_alignment_1;Target=Contig1660 5 85 +
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	128986	129297	567	-	0	ID=Contig598_alignment_2;Target=Contig598 546 868 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	136059	136201	619	-	0	ID=Contig746_alignment_1;Target=Contig746 193 343 -
C04HBa0332B10.1	RepeatMasker	nucleotide_motif	136174	136210	241	+	0	ID=Contig1454_alignment_2;Target=Contig1454 253 289 +