psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 48 1 0 0 0 0 3 23 - SGN-E744819 1614 1445 1494 C09HBa0033H16.1 31276 18586 18658 4 8,5,29,7, 120,128,133,162, 18586,18600,18608,18651, 607 1 0 0 0 0 0 0 - SGN-E553752 619 0 608 C09HBa0033H16.1 31276 696 1304 1 608, 11, 696, 606 0 0 0 1 1 0 0 - SGN-E553871 607 0 607 C09HBa0033H16.1 31276 699 1305 2 87,519, 0,88, 699,786, 180 8 0 0 3 70 2 29 + SGN-E551553 447 43 301 C09HBa0033H16.1 31276 123 340 4 30,20,17,121, 43,82,160,180, 123,153,201,219, 608 0 0 0 0 0 0 0 - SGN-E551559 620 0 608 C09HBa0033H16.1 31276 696 1304 1 608, 12, 696, 224 0 0 0 0 0 0 0 - SGN-E552461 535 300 524 C09HBa0033H16.1 31276 696 920 1 224, 11, 696, 459 1 0 0 0 0 0 0 - SGN-E212403 473 0 460 C09HBa0033H16.1 31276 696 1156 1 460, 13, 696, 35 0 0 0 1 1 1 7 + SGN-E213700 704 201 237 C09HBa0033H16.1 31276 26956 26998 2 9,26, 201,211, 26956,26972, 35 0 0 0 1 1 1 7 + SGN-E202194 380 201 237 C09HBa0033H16.1 31276 26956 26998 2 9,26, 201,211, 26956,26972, 395 0 0 0 0 0 0 0 - SGN-E557055 508 0 395 C09HBa0033H16.1 31276 696 1091 1 395, 113, 696, 586 0 0 0 0 0 1 1 - SGN-E309170 586 0 586 C09HBa0033H16.1 31276 720 1307 2 133,453, 0,133, 720,854, 530 0 0 0 0 0 0 0 + SGN-E390673 530 0 530 C09HBa0033H16.1 31276 23914 24444 1 530, 0, 23914, 574 0 0 0 0 0 0 0 + SGN-E390674 574 0 574 C09HBa0033H16.1 31276 23914 24488 1 574, 0, 23914, 608 5 0 2 0 0 1 221 + SGN-E390927 626 0 615 C09HBa0033H16.1 31276 24922 25758 2 205,410, 0,205, 24922,25348, 716 0 0 1 0 0 2 331 + SGN-E390928 728 0 717 C09HBa0033H16.1 31276 24710 25758 3 25,282,410, 0,25,307, 24710,24845,25348, 35 0 0 0 1 1 1 7 + SGN-E394265 266 202 238 C09HBa0033H16.1 31276 26956 26998 2 9,26, 202,212, 26956,26972, 35 0 0 0 1 1 1 7 + SGN-E397053 297 233 269 C09HBa0033H16.1 31276 26956 26998 2 9,26, 233,243, 26956,26972, 454 34 0 0 0 0 0 0 - SGN-E723470 497 9 497 C09HBa0033H16.1 31276 897 1385 1 488, 0, 897, 153 0 0 0 0 0 0 0 + SGN-E736262 845 3 156 C09HBa0033H16.1 31276 31123 31276 1 153, 3, 31123, 92 0 0 0 2 2 0 0 + SGN-E737921 334 0 94 C09HBa0033H16.1 31276 31184 31276 3 36,36,20, 0,37,74, 31184,31220,31256, 408 5 0 0 0 0 0 0 - SGN-E243257 413 0 413 C09HBa0033H16.1 31276 883 1296 1 413, 0, 883, 580 5 0 0 0 0 0 0 - SGN-E266444 585 0 585 C09HBa0033H16.1 31276 716 1301 1 585, 0, 716, 606 2 0 0 0 0 0 0 - SGN-E266236 619 0 608 C09HBa0033H16.1 31276 693 1301 1 608, 11, 693, 577 0 0 0 0 0 0 0 + SGN-E278924 577 0 577 C09HBa0033H16.1 31276 24113 24690 1 577, 0, 24113, 523 0 0 0 0 0 0 0 - SGN-E287327 532 0 523 C09HBa0033H16.1 31276 750 1273 1 523, 9, 750, 35 0 0 0 1 1 1 7 + SGN-E285606 432 232 268 C09HBa0033H16.1 31276 26956 26998 2 9,26, 232,242, 26956,26972, 35 0 0 0 1 1 1 7 + SGN-E287578 531 146 182 C09HBa0033H16.1 31276 26956 26998 2 9,26, 146,156, 26956,26972, 449 0 0 0 0 0 0 0 + SGN-E294327 449 0 449 C09HBa0033H16.1 31276 23915 24364 1 449, 0, 23915, 449 0 0 0 0 0 0 0 - SGN-E294328 449 0 449 C09HBa0033H16.1 31276 23915 24364 1 449, 0, 23915, 561 4 0 0 1 13 1 2 + SGN-E291937 578 0 578 C09HBa0033H16.1 31276 23916 24483 2 146,419, 0,159, 23916,24064, 620 1 0 0 0 0 0 0 + SGN-E291872 621 0 621 C09HBa0033H16.1 31276 23916 24537 1 621, 0, 23916, 545 2 0 0 0 0 0 0 + SGN-E300235 547 0 547 C09HBa0033H16.1 31276 23889 24436 1 547, 0, 23889, 35 3 0 0 0 0 0 0 + SGN-E300235 547 22 60 C09HBa0033H16.1 31276 20159 20197 1 38, 22, 20159, 606 0 0 0 0 0 0 0 + SGN-E301544 606 0 606 C09HBa0033H16.1 31276 23968 24574 1 606, 0, 23968, 436 0 0 0 0 0 0 0 + SGN-E302969 436 0 436 C09HBa0033H16.1 31276 24071 24507 1 436, 0, 24071, 520 0 0 0 3 7 1 3 + SGN-E302472 527 0 527 C09HBa0033H16.1 31276 23914 24437 4 253,56,81,130, 0,258,315,397, 23914,24170,24226,24307, 550 3 0 0 0 0 0 0 + SGN-E305501 553 0 553 C09HBa0033H16.1 31276 23859 24412 1 553, 0, 23859, 38 3 0 0 0 0 0 0 + SGN-E305501 553 49 90 C09HBa0033H16.1 31276 20156 20197 1 41, 49, 20156, 278 5 0 0 0 0 0 0 + SGN-E309339 283 0 283 C09HBa0033H16.1 31276 19562 19845 1 283, 0, 19562, 397 1 0 0 0 0 0 0 + SGN-E310265 398 0 398 C09HBa0033H16.1 31276 23854 24252 1 398, 0, 23854, 655 0 0 0 0 0 0 0 + SGN-E335463 655 0 655 C09HBa0033H16.1 31276 24069 24724 1 655, 0, 24069, 523 5 0 4 0 0 0 0 - SGN-E348694 532 0 532 C09HBa0033H16.1 31276 721 1253 1 532, 0, 721, 605 0 0 0 0 0 0 0 - SGN-E352697 615 0 605 C09HBa0033H16.1 31276 696 1301 1 605, 10, 696, 498 0 0 0 0 0 0 0 - SGN-E352159 528 0 498 C09HBa0033H16.1 31276 698 1196 1 498, 30, 698, 591 0 0 0 0 0 0 0 - SGN-E354030 592 0 591 C09HBa0033H16.1 31276 710 1301 1 591, 1, 710, 580 9 0 0 0 0 0 0 - SGN-E357600 589 0 589 C09HBa0033H16.1 31276 716 1305 1 589, 0, 716, 540 0 0 0 0 0 0 0 - SGN-E357825 540 0 540 C09HBa0033H16.1 31276 758 1298 1 540, 0, 758, 568 13 0 0 2 2 3 113 - SGN-E689717 587 4 587 C09HBa0033H16.1 31276 579 1273 5 7,89,37,46,402, 0,7,96,134,181, 579,696,786,825,871, 545 18 0 0 4 13 4 14 - SGN-E693557 588 0 576 C09HBa0033H16.1 31276 696 1273 6 8,30,33,44,44,404, 12,20,54,94,139,184, 696,705,738,779,825,869, 363 4 0 0 1 2 0 0 + SGN-E691328 382 1 370 C09HBa0033H16.1 31276 25408 25775 2 359,8, 1,362, 25408,25767, 358 8 0 0 1 2 0 0 + SGN-E695168 387 0 368 C09HBa0033H16.1 31276 25407 25773 2 360,6, 0,362, 25407,25767,