psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1386 1 0 0 1 1 8 3081 - SGN-E746080 1403 2 1390 C09HBa0130D14.1 103855 2095 6563 10 4,292,162,158,76,83,326,47,137,102, 13,18,310,472,630,706,789,1115,1162,1299, 2095,2099,2480,2868,4256,4414,5249,5699,6188,6461, 407 0 0 0 0 0 0 0 + SGN-E745973 1505 1081 1488 C09HBa0130D14.1 103855 0 407 1 407, 1081, 0, 841 1 0 0 0 0 6 2766 - SGN-E555513 842 0 842 C09HBa0130D14.1 103855 2901 6509 7 125,76,83,326,47,137,48, 0,125,201,284,610,657,794, 2901,4256,4414,5249,5699,6188,6461, 466 12 0 0 2 4 2 7617 - SGN-E688349 590 101 583 C09HBa0130D14.1 103855 35108 43203 5 179,42,60,15,182, 7,189,231,291,307, 35108,35287,35330,43006,43021, 47 2 0 0 0 0 0 0 - SGN-E688349 590 101 150 C09HBa0130D14.1 103855 50905 50954 1 49, 440, 50905, 30 0 0 0 0 0 0 0 - SGN-E209194 380 23 53 C09HBa0130D14.1 103855 97022 97052 1 30, 327, 97022, 33 0 0 0 1 1 0 0 + SGN-E200836 500 114 148 C09HBa0130D14.1 103855 97019 97052 2 29,4, 114,144, 97019,97048, 720 1 0 1 0 0 5 1536 - SGN-E211838 722 0 722 C09HBa0130D14.1 103855 4260 6518 6 72,83,326,47,137,57, 0,72,155,481,528,665, 4260,4414,5249,5699,6188,6461, 617 1 0 0 0 0 4 1454 - SGN-E211843 618 0 618 C09HBa0130D14.1 103855 4446 6518 5 51,326,47,137,57, 0,51,377,424,561, 4446,5249,5699,6188,6461, 292 1 0 0 1 11 3 713 - SGN-E211873 304 0 304 C09HBa0130D14.1 103855 5512 6518 4 51,48,137,57, 0,62,110,247, 5512,5698,6188,6461, 598 2 0 2 0 0 5 2291 - SGN-E213507 602 0 602 C09HBa0130D14.1 103855 2541 5434 6 4,96,158,76,83,185, 0,4,100,258,334,417, 2541,2546,2868,4256,4414,5249, 534 1 0 0 0 0 4 1400 - SGN-E319591 535 0 535 C09HBa0130D14.1 103855 4277 6212 5 55,83,326,47,24, 0,55,138,464,511, 4277,4414,5249,5699,6188, 442 0 0 0 0 0 3 1318 - SGN-E319392 442 0 442 C09HBa0130D14.1 103855 4452 6212 4 45,326,47,24, 0,45,371,418, 4452,5249,5699,6188, 31 1 0 0 0 0 0 0 + SGN-E319512 478 212 244 C09HBa0130D14.1 103855 18228 18260 1 32, 212, 18228, 121 7 0 0 1 1 1 3 - SGN-E367848 663 424 553 C09HBa0130D14.1 103855 52837 52968 2 122,6, 110,233, 52837,52962, 410 9 0 0 0 0 0 0 + SGN-E369319 694 267 686 C09HBa0130D14.1 103855 0 419 1 419, 267, 0, 356 14 0 0 3 37 3 231 - SGN-E372630 443 23 430 C09HBa0130D14.1 103855 34111 34712 6 25,14,97,115,58,61, 13,47,69,186,301,359, 34111,34136,34150,34295,34501,34651, 362 12 0 0 3 37 3 231 - SGN-E372631 444 22 433 C09HBa0130D14.1 103855 34107 34712 6 29,14,97,115,58,61, 11,49,71,188,303,361, 34107,34136,34150,34295,34501,34651, 75 3 0 0 1 2 0 0 - SGN-E395680 624 506 586 C09HBa0130D14.1 103855 99291 99369 2 47,31, 38,87, 99291,99338, 569 29 0 0 0 0 2 4737 - SGN-E538082 666 0 598 C09HBa0130D14.1 103855 62658 67993 3 224,170,204, 68,292,462, 62658,62883,67789, 34 0 0 0 1 1 0 0 + SGN-E543727 758 626 661 C09HBa0130D14.1 103855 97018 97052 2 30,4, 626,657, 97018,97048, 466 12 0 0 2 4 2 7617 - SGN-E550684 590 101 583 C09HBa0130D14.1 103855 35108 43203 5 179,42,60,15,182, 7,189,231,291,307, 35108,35287,35330,43006,43021, 47 2 0 0 0 0 0 0 - SGN-E550684 590 101 150 C09HBa0130D14.1 103855 50905 50954 1 49, 440, 50905, 358 7 0 0 0 0 2 315 - SGN-E238557 409 44 409 C09HBa0130D14.1 103855 2341 3021 3 50,162,153, 0,50,212, 2341,2480,2868, 409 1 0 0 0 0 2 566 - SGN-E237715 410 0 410 C09HBa0130D14.1 103855 5262 6238 3 313,47,50, 0,313,360, 5262,5699,6188, 282 2 0 0 0 0 2 1456 - SGN-E236246 284 0 284 C09HBa0130D14.1 103855 2555 4295 3 87,158,39, 0,87,245, 2555,2868,4256, 267 1 0 0 0 0 1 124 - SGN-E240801 268 0 268 C09HBa0130D14.1 103855 5353 5745 2 222,46, 0,222, 5353,5699, 472 2 0 0 0 0 3 2064 - SGN-E240282 474 0 474 C09HBa0130D14.1 103855 2902 5440 4 124,76,83,191, 0,124,200,283, 2902,4256,4414,5249, 435 2 0 0 0 0 3 1545 - SGN-E241848 437 0 437 C09HBa0130D14.1 103855 2313 4295 4 78,162,158,39, 0,78,240,398, 2313,2480,2868,4256, 430 5 0 1 0 0 3 1545 - SGN-E242207 436 0 436 C09HBa0130D14.1 103855 2314 4295 4 77,162,158,39, 0,77,239,397, 2314,2480,2868,4256, 780 21 0 0 4 5 7 2769 - SGN-E727099 806 0 806 C09HBa0130D14.1 103855 2944 6514 9 82,76,83,326,47,106,30,11,40, 0,82,158,241,567,615,722,753,766, 2944,4256,4414,5249,5699,6189,6295,6462,6474, 765 0 0 0 0 0 0 0 - SGN-E727395 793 4 769 C09HBa0130D14.1 103855 80137 80902 1 765, 24, 80137, 237 4 0 0 0 0 2 566 - SGN-E723309 241 0 241 C09HBa0130D14.1 103855 5503 6310 3 72,47,122, 0,72,119, 5503,5699,6188, 825 6 0 0 0 0 6 2766 - SGN-E724602 832 1 832 C09HBa0130D14.1 103855 2942 6539 7 84,76,83,326,47,137,78, 0,84,160,243,569,616,753, 2942,4256,4414,5249,5699,6188,6461, 841 1 0 0 0 0 6 2766 - SGN-E737039 842 0 842 C09HBa0130D14.1 103855 2885 6493 7 141,76,83,326,47,137,32, 0,141,217,300,626,673,810, 2885,4256,4414,5249,5699,6188,6461, 699 4 0 0 0 0 5 2338 - SGN-E697541 703 0 703 C09HBa0130D14.1 103855 2578 5619 6 64,158,76,83,317,5, 0,64,222,298,381,698, 2578,2868,4256,4414,5249,5614, 625 8 0 0 1 8 5 1543 - SGN-E698572 652 11 652 C09HBa0130D14.1 103855 4312 6488 6 20,83,326,47,130,27, 0,20,103,429,476,614, 4312,4414,5249,5699,6188,6461, 390 8 0 0 1 7 2 573 - SGN-E699148 405 0 405 C09HBa0130D14.1 103855 5355 6326 3 212,48,138, 0,219,267, 5355,5698,6188, 797 0 0 0 0 0 6 2766 - SGN-E699993 797 0 797 C09HBa0130D14.1 103855 2940 6503 7 86,76,83,326,47,137,42, 0,86,162,245,571,618,755, 2940,4256,4414,5249,5699,6188,6461, 821 0 0 0 0 0 6 2766 - SGN-E700003 821 0 821 C09HBa0130D14.1 103855 2900 6487 7 126,76,83,326,47,137,26, 0,126,202,285,611,658,795, 2900,4256,4414,5249,5699,6188,6461, 899 1 0 0 0 0 7 2992 - SGN-E701361 903 3 903 C09HBa0130D14.1 103855 2598 6490 8 44,158,76,83,326,47,137,29, 0,44,202,278,361,687,734,871, 2598,2868,4256,4414,5249,5699,6188,6461, 806 1 0 0 0 0 7 2839 - SGN-E701617 811 0 807 C09HBa0130D14.1 103855 2305 5951 8 84,3,161,158,76,83,237,5, 4,88,91,252,410,486,569,806, 2305,2390,2481,2868,4256,4414,5249,5946, 635 13 0 0 0 0 4 1454 - SGN-E704620 648 0 648 C09HBa0130D14.1 103855 4438 6540 5 59,326,47,137,79, 0,59,385,432,569, 4438,5249,5699,6188,6461, 811 1 0 0 1 1 7 2769 - SGN-E705718 815 0 813 C09HBa0130D14.1 103855 2922 6503 8 104,76,83,217,106,47,137,42, 2,106,182,265,483,589,636,773, 2922,4256,4414,5249,5469,5699,6188,6461, 740 1 0 0 0 0 6 2766 - SGN-E706578 741 0 741 C09HBa0130D14.1 103855 2992 6499 7 34,76,83,326,47,137,38, 0,34,110,193,519,566,703, 2992,4256,4414,5249,5699,6188,6461, 797 0 0 0 0 0 5 2379 - SGN-E706735 797 0 797 C09HBa0130D14.1 103855 2377 5553 6 14,162,158,76,83,304, 0,14,176,334,410,493, 2377,2480,2868,4256,4414,5249, 662 23 0 0 6 12 4 1461 - SGN-E709284 702 5 702 C09HBa0130D14.1 103855 4431 6577 10 66,318,17,31,9,24,4,100,24,92, 0,66,391,409,440,450,475,480,580,605, 4431,5249,5698,5715,6188,6197,6221,6225,6461,6485, 844 2 0 0 0 0 6 2766 - SGN-E709330 846 0 846 C09HBa0130D14.1 103855 2899 6511 7 127,76,83,326,47,137,50, 0,127,203,286,612,659,796, 2899,4256,4414,5249,5699,6188,6461, 747 2 0 0 1 1 6 2767 - SGN-E709848 753 3 753 C09HBa0130D14.1 103855 3002 6518 7 26,73,83,326,47,137,57, 0,27,100,183,509,556,693, 3002,4259,4414,5249,5699,6188,6461, 774 6 0 0 0 0 5 1536 - SGN-E710560 781 1 781 C09HBa0130D14.1 103855 4280 6596 6 52,83,326,47,137,135, 0,52,135,461,508,645, 4280,4414,5249,5699,6188,6461, 698 0 0 0 0 0 4 1627 - SGN-E717313 707 0 698 C09HBa0130D14.1 103855 2101 4426 5 290,162,158,76,12, 9,299,461,619,695, 2101,2480,2868,4256,4414, 682 2 0 0 0 0 5 1536 - SGN-E250710 684 0 684 C09HBa0130D14.1 103855 4271 6491 6 61,83,326,47,137,30, 0,61,144,470,517,654, 4271,4414,5249,5699,6188,6461, 552 0 0 0 0 0 4 1400 - SGN-E251534 552 0 552 C09HBa0130D14.1 103855 4261 6213 5 71,83,326,47,25, 0,71,154,480,527, 4261,4414,5249,5699,6188, 638 1 0 0 0 0 4 1400 - SGN-E255157 639 0 639 C09HBa0130D14.1 103855 4268 6307 5 64,83,326,47,119, 0,64,147,473,520, 4268,4414,5249,5699,6188, 535 4 0 0 0 0 3 1318 - SGN-E254839 539 0 539 C09HBa0130D14.1 103855 4446 6303 4 51,326,47,115, 0,51,377,424, 4446,5249,5699,6188, 316 3 0 0 0 0 2 566 - SGN-E260192 320 1 320 C09HBa0130D14.1 103855 5380 6265 3 195,47,77, 0,195,242, 5380,5699,6188, 750 2 0 0 0 0 6 2766 - SGN-E262212 752 0 752 C09HBa0130D14.1 103855 2958 6476 7 68,76,83,326,47,137,15, 0,68,144,227,553,600,737, 2958,4256,4414,5249,5699,6188,6461, 758 3 0 1 2 2 5 2630 - SGN-E261465 764 0 764 C09HBa0130D14.1 103855 2915 6307 8 30,81,76,83,19,307,47,119, 0,31,112,188,271,291,598,645, 2915,2945,4256,4414,5249,5268,5699,6188, 456 4 0 0 0 0 1 4736 - SGN-E268559 460 0 460 C09HBa0130D14.1 103855 62925 68121 2 128,332, 0,128, 62925,67789, 552 2 0 0 0 0 3 702 - SGN-E266726 554 0 554 C09HBa0130D14.1 103855 5256 6512 4 319,47,137,51, 0,319,366,503, 5256,5699,6188,6461, 525 1 0 0 0 0 3 702 - SGN-E265452 547 0 526 C09HBa0130D14.1 103855 5248 6476 4 327,47,137,15, 21,348,395,532, 5248,5699,6188,6461, 197 7 0 0 0 0 1 14 - SGN-E221527 217 0 204 C09HBa0130D14.1 103855 2095 2313 2 142,62, 13,155, 2095,2251, 337 8 0 0 0 0 2 103 - SGN-E221932 358 0 345 C09HBa0130D14.1 103855 2095 2543 3 142,140,63, 13,155,295, 2095,2251,2480, 235 14 0 0 0 0 1 14 - SGN-E221815 268 0 249 C09HBa0130D14.1 103855 2105 2368 2 132,117, 19,151, 2105,2251, 334 4 0 0 1 1 2 103 - SGN-E219141 358 0 339 C09HBa0130D14.1 103855 2130 2571 4 107,140,67,24, 19,126,266,334, 2130,2251,2480,2547, 391 5 0 1 0 0 2 103 - SGN-E219563 413 0 397 C09HBa0130D14.1 103855 2127 2627 3 110,140,147, 16,126,266, 2127,2251,2480, 323 9 0 0 0 0 0 0 + SGN-E221336 357 0 332 C09HBa0130D14.1 103855 11 343 1 332, 0, 11, 231 4 0 0 0 0 0 0 - SGN-E232485 252 0 235 C09HBa0130D14.1 103855 2101 2336 1 235, 17, 2101, 396 5 0 0 1 7 3 109 - SGN-E239074 429 0 408 C09HBa0130D14.1 103855 2112 2622 4 101,18,140,142, 21,129,147,287, 2112,2219,2251,2480, 328 4 0 0 0 0 2 103 - SGN-E239282 350 0 332 C09HBa0130D14.1 103855 2110 2545 3 127,140,65, 18,145,285, 2110,2251,2480, 481 1 0 0 0 0 3 702 - SGN-E269524 482 0 482 C09HBa0130D14.1 103855 5307 6491 4 268,47,137,30, 0,268,315,452, 5307,5699,6188,6461, 230 14 0 0 0 0 2 566 - SGN-E270858 244 0 244 C09HBa0130D14.1 103855 5488 6298 3 87,47,110, 0,87,134, 5488,5699,6188, 486 1 0 1 0 0 3 702 - SGN-E269965 488 0 488 C09HBa0130D14.1 103855 5362 6552 4 213,47,137,91, 0,213,260,397, 5362,5699,6188,6461, 259 8 0 0 0 0 4 702 - SGN-E274674 267 0 267 C09HBa0130D14.1 103855 5525 6494 5 50,47,138,3,29, 0,50,97,235,238, 5525,5699,6188,6327,6465, 657 1 0 0 0 0 5 1536 - SGN-E276807 658 0 658 C09HBa0130D14.1 103855 4319 6513 6 13,83,326,47,137,52, 0,13,96,422,469,606, 4319,4414,5249,5699,6188,6461, 460 17 0 0 0 0 3 702 - SGN-E276644 477 0 477 C09HBa0130D14.1 103855 5334 6513 4 241,47,137,52, 0,241,288,425, 5334,5699,6188,6461, 358 12 0 0 3 37 3 231 - SGN-E289053 435 13 420 C09HBa0130D14.1 103855 34111 34712 6 25,14,97,115,58,61, 15,49,71,188,303,361, 34111,34136,34150,34295,34501,34651, 31 1 0 0 0 0 0 0 + SGN-E285849 613 214 246 C09HBa0130D14.1 103855 18228 18260 1 32, 214, 18228, 411 7 0 0 0 0 3 702 - SGN-E294764 418 0 418 C09HBa0130D14.1 103855 5373 6493 4 202,47,137,32, 0,202,249,386, 5373,5699,6188,6461, 426 0 0 0 0 0 3 1545 - SGN-E296029 426 0 426 C09HBa0130D14.1 103855 2312 4283 4 79,162,158,27, 0,79,241,399, 2312,2480,2868,4256, 481 1 0 0 0 0 3 702 - SGN-E290302 489 7 489 C09HBa0130D14.1 103855 5347 6531 4 228,47,137,70, 0,228,275,412, 5347,5699,6188,6461, 400 9 0 0 0 0 0 0 - SGN-E303433 608 11 420 C09HBa0130D14.1 103855 0 409 1 409, 188, 0, 216 11 0 0 1 3 0 0 + SGN-E332514 677 0 230 C09HBa0130D14.1 103855 55373 55600 2 103,124, 0,106, 55373,55476, 496 4 0 0 0 0 2 103 + SGN-E333615 500 0 500 C09HBa0130D14.1 103855 2025 2628 3 212,140,148, 0,212,352, 2025,2251,2480, 330 15 0 0 1 7 1 21 + SGN-E333619 352 0 352 C09HBa0130D14.1 103855 2025 2391 2 203,142, 0,210, 2025,2249, 514 1 0 0 0 0 3 702 - SGN-E329957 515 0 515 C09HBa0130D14.1 103855 5322 6539 4 253,47,137,78, 0,253,300,437, 5322,5699,6188,6461, 473 3 0 0 1 3 3 704 - SGN-E323405 480 1 480 C09HBa0130D14.1 103855 5314 6494 4 261,47,139,29, 0,261,308,450, 5314,5699,6188,6465, 528 1 0 0 0 0 3 1318 - SGN-E313980 529 0 529 C09HBa0130D14.1 103855 4460 6307 4 37,326,47,119, 0,37,363,410, 4460,5249,5699,6188, 722 6 0 1 0 0 4 4 - SGN-E314912 729 0 729 C09HBa0130D14.1 103855 80298 81031 5 11,19,604,23,72, 0,11,30,634,657, 80298,80310,80330,80935,80959, 472 1 0 0 3 3 3 702 - SGN-E337090 476 0 476 C09HBa0130D14.1 103855 5308 6483 7 267,47,20,70,25,22,22, 0,267,314,335,406,432,454, 5308,5699,6188,6208,6278,6303,6461, 761 1 0 0 1 1 6 2766 - SGN-E346187 763 0 763 C09HBa0130D14.1 103855 2990 6518 8 36,76,83,15,311,47,137,57, 0,36,112,195,211,522,569,706, 2990,4256,4414,5249,5264,5699,6188,6461, 545 0 0 0 0 0 3 702 - SGN-E347216 567 0 545 C09HBa0130D14.1 103855 5248 6495 4 327,47,137,34, 22,349,396,533, 5248,5699,6188,6461, 767 2 0 1 0 0 6 2766 - SGN-E340061 770 0 770 C09HBa0130D14.1 103855 2965 6501 7 61,76,83,326,47,137,40, 0,61,137,220,546,593,730, 2965,4256,4414,5249,5699,6188,6461, 741 0 0 1 1 7 5 1543 - SGN-E341855 749 0 749 C09HBa0130D14.1 103855 4260 6545 6 63,85,326,47,137,84, 0,70,155,481,528,665, 4260,4412,5249,5699,6188,6461, 604 5 0 0 1 1 3 329 - SGN-E353254 614 0 610 C09HBa0130D14.1 103855 1998 2936 5 7,232,140,162,68, 4,12,244,384,546, 1998,2005,2251,2480,2868, 502 4 0 0 0 0 3 329 - SGN-E355315 515 0 506 C09HBa0130D14.1 103855 2101 2936 4 136,140,162,68, 9,145,285,447, 2101,2251,2480,2868, 451 4 0 0 0 0 2 103 - SGN-E349512 455 0 455 C09HBa0130D14.1 103855 2025 2583 3 212,140,103, 0,212,352, 2025,2251,2480, 502 4 0 0 0 0 3 329 - SGN-E356224 515 0 506 C09HBa0130D14.1 103855 2101 2936 4 136,140,162,68, 9,145,285,447, 2101,2251,2480,2868, 367 4 0 0 0 0 2 103 - SGN-E350303 380 0 371 C09HBa0130D14.1 103855 2095 2569 3 142,140,89, 9,151,291, 2095,2251,2480, 502 4 0 0 0 0 3 329 - SGN-E351096 515 0 506 C09HBa0130D14.1 103855 2101 2936 4 136,140,162,68, 9,145,285,447, 2101,2251,2480,2868, 502 4 0 0 0 0 3 329 - SGN-E352405 515 0 506 C09HBa0130D14.1 103855 2101 2936 4 136,140,162,68, 9,145,285,447, 2101,2251,2480,2868, 114 8 0 0 0 0 0 0 - SGN-E690632 711 470 592 C09HBa0130D14.1 103855 52837 52959 1 122, 119, 52837, 114 8 0 0 0 0 0 0 - SGN-E694472 710 466 588 C09HBa0130D14.1 103855 52837 52959 1 122, 122, 52837, 51 1 0 0 0 0 2 16 + SGN-E691253 822 196 248 C09HBa0130D14.1 103855 18236 18304 3 30,10,12, 196,226,236, 18236,18279,18292, 413 12 0 0 2 4 2 7617 - SGN-E358519 429 0 429 C09HBa0130D14.1 103855 35049 43091 5 238,46,56,15,70, 0,241,287,343,359, 35049,35287,35334,43006,43021, 480 2 0 0 0 0 3 702 - SGN-E356089 482 0 482 C09HBa0130D14.1 103855 5307 6491 4 268,47,137,30, 0,268,315,452, 5307,5699,6188,6461,