psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 588 1 0 0 1 1 2 315 + SGN-E746080 1403 800 1390 C09SLe0066M20.2 125256 0 904 4 131,162,292,4, 800,931,1093,1386, 0,357,608,900, 1487 0 0 0 0 0 7 5769 - SGN-E745973 1505 1 1488 C09SLe0066M20.2 125256 2592 9848 8 438,87,139,79,203,192,213,136, 17,455,542,681,760,963,1155,1368, 2592,3128,3891,5540,5784,6065,6364,9712, 97 1 0 0 0 0 0 0 + SGN-E555513 842 744 842 C09SLe0066M20.2 125256 0 98 1 98, 744, 0, 38 1 0 0 1 21 0 0 + SGN-E203450 482 94 154 C09SLe0066M20.2 125256 48701 48740 2 9,30, 94,124, 48701,48710, 475 6 0 0 3 13 5 1089 + SGN-E205410 494 0 494 C09SLe0066M20.2 125256 96616 98186 6 64,30,11,121,73,182, 0,71,105,116,237,312, 96616,96686,96722,96818,97679,98004, 41 0 0 0 0 0 2 4 - SGN-E211649 401 339 380 C09SLe0066M20.2 125256 48710 48755 3 28,8,5, 21,49,57, 48710,48741,48750, 227 2 0 2 0 0 2 227 + SGN-E213507 602 371 602 C09SLe0066M20.2 125256 0 458 3 131,96,4, 371,502,598, 0,357,454, 644 5 0 2 1 1 1 1 - SGN-E214439 652 0 652 C09SLe0066M20.2 125256 36357 37009 3 366,85,200, 0,366,452, 36357,36724,36809, 515 6 0 0 0 0 1 210 + SGN-E214935 521 0 521 C09SLe0066M20.2 125256 98630 99361 2 153,368, 0,153, 98630,98993, 613 12 0 0 3 13 6 1294 + SGN-E314498 638 0 638 C09SLe0066M20.2 125256 96621 98540 7 59,30,11,121,73,229,102, 0,66,100,111,232,307,536, 96621,96686,96722,96818,97679,98004,98438, 30 0 0 0 0 0 0 0 + SGN-E369429 672 618 648 C09SLe0066M20.2 125256 48709 48739 1 30, 618, 48709, 667 10 0 0 1 1 2 775 - SGN-E369319 694 8 686 C09SLe0066M20.2 125256 2580 4032 3 450,89,138, 8,458,548, 2580,3128,3894, 606 8 0 0 1 1 3 3320 - SGN-E369320 615 0 615 C09SLe0066M20.2 125256 5901 9835 5 86,192,213,117,6, 0,86,278,491,609, 5901,6065,6364,9712,9829, 554 8 0 0 1 1 4 2339 - SGN-E368222 567 0 563 C09SLe0066M20.2 125256 98635 101536 6 148,141,60,165,43,5, 4,152,293,353,518,562, 98635,98993,99877,101064,101488,101531, 244 8 0 0 0 0 2 114 - SGN-E368223 271 19 271 C09SLe0066M20.2 125256 103581 103947 3 56,184,12, 0,56,240, 103581,103750,103935, 336 3 0 0 0 0 2 315 + SGN-E238557 409 70 409 C09SLe0066M20.2 125256 4 658 3 127,162,50, 70,197,359, 4,357,608, 216 2 0 0 0 0 1 226 + SGN-E236246 284 66 284 C09SLe0066M20.2 125256 0 444 2 131,87, 66,197, 0,357, 95 2 0 0 0 0 0 0 + SGN-E240282 474 377 474 C09SLe0066M20.2 125256 0 97 1 97, 377, 0, 369 2 0 0 0 0 2 315 + SGN-E241848 437 66 437 C09SLe0066M20.2 125256 0 686 3 131,162,78, 66,197,359, 0,357,608, 504 7 0 0 0 0 3 804 + SGN-E243668 536 25 536 C09SLe0066M20.2 125256 102619 103934 4 65,124,138,184, 25,90,214,352, 102619,103196,103499,103750, 364 5 0 1 0 0 2 315 + SGN-E242207 436 66 436 C09SLe0066M20.2 125256 0 685 3 131,162,77, 66,197,359, 0,357,608, 54 1 0 0 0 0 0 0 + SGN-E727099 806 751 806 C09SLe0066M20.2 125256 0 55 1 55, 751, 0, 57 0 0 0 0 0 0 0 + SGN-E724602 832 775 832 C09SLe0066M20.2 125256 0 57 1 57, 775, 0, 113 1 0 0 0 0 0 0 + SGN-E737039 842 728 842 C09SLe0066M20.2 125256 0 114 1 114, 728, 0, 191 4 0 0 0 0 1 226 + SGN-E697541 703 508 703 C09SLe0066M20.2 125256 0 421 2 131,64, 508,639, 0,357, 59 0 0 0 0 0 0 0 + SGN-E699993 797 738 797 C09SLe0066M20.2 125256 0 59 1 59, 738, 0, 99 0 0 0 0 0 0 0 + SGN-E700003 821 722 821 C09SLe0066M20.2 125256 0 99 1 99, 722, 0, 175 0 0 0 0 0 1 226 + SGN-E701361 903 728 903 C09SLe0066M20.2 125256 0 401 2 131,44, 728,859, 0,357, 378 1 0 0 0 0 3 315 + SGN-E701617 811 428 807 C09SLe0066M20.2 125256 0 694 4 131,161,3,84, 428,559,720,723, 0,357,606,610, 909 1 0 1 0 0 5 1614 + SGN-E702238 914 3 914 C09SLe0066M20.2 125256 96609 99134 6 124,121,73,288,164,141, 3,127,248,321,609,773, 96609,96818,97679,97945,98619,98993, 76 1 0 0 0 0 0 0 + SGN-E705718 815 736 813 C09SLe0066M20.2 125256 0 77 1 77, 736, 0, 307 0 0 0 0 0 2 315 + SGN-E706735 797 490 797 C09SLe0066M20.2 125256 0 622 3 131,162,14, 490,621,783, 0,357,608, 99 1 0 0 0 0 0 0 + SGN-E709330 846 746 846 C09SLe0066M20.2 125256 0 100 1 100, 746, 0, 583 0 0 0 0 0 2 315 + SGN-E717313 707 115 698 C09SLe0066M20.2 125256 0 898 3 131,162,290, 115,246,408, 0,357,608, 540 9 0 0 1 1 3 3320 - SGN-E247407 550 0 550 C09SLe0066M20.2 125256 5966 9835 5 21,192,213,117,6, 0,21,213,426,544, 5966,6065,6364,9712,9829, 560 8 0 0 0 0 3 2393 + SGN-E253418 569 0 568 C09SLe0066M20.2 125256 99687 102648 4 250,165,124,29, 0,250,415,539, 99687,101064,101421,102619, 325 9 0 0 0 0 2 114 - SGN-E259038 353 19 353 C09SLe0066M20.2 125256 103499 103947 3 138,184,12, 0,138,322, 103499,103750,103935, 40 1 0 0 0 0 0 0 + SGN-E262212 752 711 752 C09SLe0066M20.2 125256 0 41 1 41, 711, 0, 82 2 0 0 1 1 0 0 + SGN-E261465 764 679 764 C09SLe0066M20.2 125256 0 84 2 54,30, 679,734, 0,54, 788 10 0 0 1 1 6 4993 - SGN-E261762 799 0 799 C09SLe0066M20.2 125256 3975 9766 8 54,3,77,178,27,192,213,54, 0,54,57,134,313,340,532,745, 3975,4032,5541,5782,5960,6065,6364,9712, 197 7 0 0 0 0 1 14 + SGN-E221527 217 0 204 C09SLe0066M20.2 125256 686 904 2 61,143, 0,61, 686,761, 337 8 0 0 0 0 2 103 + SGN-E221932 358 0 345 C09SLe0066M20.2 125256 456 904 3 63,139,143, 0,63,202, 456,608,761, 235 14 0 0 0 0 1 14 + SGN-E221815 268 0 249 C09SLe0066M20.2 125256 631 894 2 116,133, 0,116, 631,761, 334 4 0 0 1 1 2 103 + SGN-E219141 358 0 339 C09SLe0066M20.2 125256 428 869 4 26,65,139,108, 0,27,92,231, 428,454,608,761, 391 5 0 1 0 0 2 103 + SGN-E219563 413 0 397 C09SLe0066M20.2 125256 372 872 3 147,139,111, 0,147,286, 372,608,761, 323 9 0 0 0 0 0 0 - SGN-E221336 357 0 332 C09SLe0066M20.2 125256 2656 2988 1 332, 25, 2656, 361 4 0 0 2 11 6 1086 - SGN-E279085 383 0 376 C09SLe0066M20.2 125256 96613 98064 7 67,30,11,121,73,3,60, 7,81,115,126,247,320,323, 96613,96686,96722,96818,97679,97935,98004, 323 4 0 0 1 8 0 0 + SGN-E279240 501 159 494 C09SLe0066M20.2 125256 74277 74604 2 306,21, 159,473, 74277,74583, 231 4 0 0 0 0 0 0 + SGN-E232485 252 0 235 C09SLe0066M20.2 125256 663 898 1 235, 0, 663, 396 5 0 0 1 7 3 109 + SGN-E239074 429 0 408 C09SLe0066M20.2 125256 377 887 4 142,139,19,101, 0,142,281,307, 377,608,761,786, 328 4 0 0 0 0 2 103 + SGN-E239282 350 0 332 C09SLe0066M20.2 125256 454 889 3 65,139,128, 0,65,204, 454,608,761, 451 8 0 0 0 0 2 185 - SGN-E275025 459 0 459 C09SLe0066M20.2 125256 5854 6498 3 133,192,134, 0,133,325, 5854,6065,6364, 372 0 0 0 0 0 2 315 + SGN-E296029 426 54 426 C09SLe0066M20.2 125256 0 687 3 131,162,79, 54,185,347, 0,357,608, 587 9 0 0 1 1 2 775 + SGN-E303433 608 11 608 C09SLe0066M20.2 125256 2590 3961 3 440,89,67, 11,451,541, 2590,3128,3894, 496 4 0 0 0 0 2 103 - SGN-E333615 500 0 500 C09SLe0066M20.2 125256 371 974 3 148,139,213, 0,148,287, 371,608,761, 325 13 0 0 2 14 2 28 - SGN-E333619 352 0 352 C09SLe0066M20.2 125256 608 974 4 142,76,7,113, 0,149,232,239, 608,771,847,861, 637 8 0 0 0 0 4 3321 - SGN-E334596 645 0 645 C09SLe0066M20.2 125256 5862 9828 5 46,78,192,213,116, 0,46,124,316,529, 5862,5909,6065,6364,9712, 502 7 0 0 1 1 2 3242 - SGN-E323717 511 1 511 C09SLe0066M20.2 125256 6086 9837 4 171,213,117,8, 0,171,384,502, 6086,6364,9712,9829, 523 9 0 0 1 1 2 3242 - SGN-E311979 533 0 533 C09SLe0066M20.2 125256 6068 9842 4 189,213,117,13, 0,189,402,520, 6068,6364,9712,9829, 505 7 0 0 3 13 5 1089 + SGN-E315418 525 0 525 C09SLe0066M20.2 125256 96614 98215 6 66,30,11,121,73,211, 0,73,107,118,239,314, 96614,96686,96722,96818,97679,98004, 507 8 0 0 1 2 3 3243 - SGN-E309514 519 2 519 C09SLe0066M20.2 125256 6071 9829 4 186,213,79,37, 0,186,399,480, 6071,6364,9712,9792, 33 1 0 0 0 0 0 0 + SGN-E340061 770 736 770 C09SLe0066M20.2 125256 0 34 1 34, 736, 0, 614 10 0 0 2 2 4 3321 - SGN-E342484 626 0 626 C09SLe0066M20.2 125256 5879 9824 7 11,63,33,46,146,213,112, 0,11,75,108,155,301,514, 5879,5891,5954,6065,6111,6364,9712, 605 4 0 0 1 1 3 329 + SGN-E353254 614 0 610 C09SLe0066M20.2 125256 63 1001 5 68,162,139,231,9, 0,68,230,369,601, 63,357,608,761,992, 502 4 0 0 0 0 3 329 + SGN-E355315 515 0 506 C09SLe0066M20.2 125256 63 898 4 68,162,139,137, 0,68,230,369, 63,357,608,761, 451 4 0 0 0 0 2 103 + SGN-E349512 455 0 455 C09SLe0066M20.2 125256 416 974 3 103,139,213, 0,103,242, 416,608,761, 502 4 0 0 0 0 3 329 + SGN-E356224 515 0 506 C09SLe0066M20.2 125256 63 898 4 68,162,139,137, 0,68,230,369, 63,357,608,761, 32 0 0 0 0 0 0 0 - SGN-E350209 738 588 620 C09SLe0066M20.2 125256 48710 48742 1 32, 118, 48710, 367 4 0 0 0 0 2 103 + SGN-E350303 380 0 371 C09SLe0066M20.2 125256 430 904 3 89,139,143, 0,89,228, 430,608,761, 502 4 0 0 0 0 3 329 + SGN-E351096 515 0 506 C09SLe0066M20.2 125256 63 898 4 68,162,139,137, 0,68,230,369, 63,357,608,761, 48 0 0 0 1 5 3 30 - SGN-E350816 416 358 411 C09SLe0066M20.2 125256 48677 48755 5 8,9,19,7,5, 5,18,27,46,53, 48677,48685,48718,48742,48750, 58 0 0 0 1 10 3 20 - SGN-E350652 432 350 418 C09SLe0066M20.2 125256 48677 48755 5 8,10,27,8,5, 14,32,42,69,77, 48677,48685,48711,48741,48750, 58 0 0 0 1 10 3 20 - SGN-E350891 421 348 416 C09SLe0066M20.2 125256 48677 48755 5 8,10,27,8,5, 5,23,33,60,68, 48677,48685,48711,48741,48750, 502 4 0 0 0 0 3 329 + SGN-E352405 515 0 506 C09SLe0066M20.2 125256 63 898 4 68,162,139,137, 0,68,230,369, 63,357,608,761, 555 6 0 0 0 0 5 3413 + SGN-E365418 561 0 561 C09SLe0066M20.2 125256 98697 102671 6 86,141,60,165,57,52, 0,86,227,287,452,509, 98697,98993,99877,101064,101488,102619,