psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1324 1 0 0 0 0 6 3426 + SGN-E745359 1350 1 1326 C09SLf0041H22.1 35635 22004 26755 7 250,102,46,90,66,69,702, 1,251,353,399,489,555,624, 22004,22390,22569,23366,24484,24745,26053, 473 0 0 0 0 0 4 734 + SGN-E208844 473 0 473 C09SLf0041H22.1 35635 6811 8018 5 47,118,111,116,81, 0,47,165,276,392, 6811,6950,7466,7730,7937, 100 4 0 0 1 16 1 37 + SGN-E202078 423 105 225 C09SLf0041H22.1 35635 25438 25579 2 68,36, 105,189, 25438,25543, 30 0 0 0 0 0 0 0 - SGN-E376006 672 485 515 C09SLf0041H22.1 35635 27549 27579 1 30, 157, 27549, 100 4 0 0 1 16 1 37 + SGN-E374798 636 105 225 C09SLf0041H22.1 35635 25438 25579 2 68,36, 105,189, 25438,25543, 710 12 0 0 0 0 0 0 - SGN-E547682 723 0 722 C09SLf0041H22.1 35635 16132 16854 1 722, 1, 16132, 660 11 0 0 0 0 0 0 - SGN-E547689 671 0 671 C09SLf0041H22.1 35635 16183 16854 1 671, 0, 16183, 358 3 0 0 0 0 0 0 - SGN-E236244 361 0 361 C09SLf0041H22.1 35635 11256 11617 1 361, 0, 11256, 506 0 0 0 0 0 0 0 - SGN-E238133 506 0 506 C09SLf0041H22.1 35635 11111 11617 1 506, 0, 11111, 469 0 0 0 0 0 0 0 - SGN-E240244 469 0 469 C09SLf0041H22.1 35635 11148 11617 1 469, 0, 11148, 40 0 0 0 1 13 1 207 - SGN-E233416 209 143 196 C09SLf0041H22.1 35635 27328 27575 2 14,26, 13,40, 27328,27549, 862 5 0 0 0 0 0 0 - SGN-E726454 867 0 867 C09SLf0041H22.1 35635 11441 12308 1 867, 0, 11441, 37 0 0 0 1 5 1 3 - SGN-E727814 695 646 688 C09SLf0041H22.1 35635 27530 27570 2 13,24, 7,25, 27530,27546, 37 0 0 0 1 5 1 3 - SGN-E728212 695 646 688 C09SLf0041H22.1 35635 27530 27570 2 13,24, 7,25, 27530,27546, 803 2 0 0 0 0 0 0 - SGN-E717685 845 40 845 C09SLf0041H22.1 35635 11512 12317 1 805, 0, 11512, 605 0 0 1 0 0 0 0 - SGN-E732031 628 4 610 C09SLf0041H22.1 35635 10454 11060 1 606, 18, 10454, 636 0 0 0 0 0 0 0 - SGN-E732333 659 4 640 C09SLf0041H22.1 35635 10456 11092 1 636, 19, 10456, 878 0 0 0 0 0 0 0 - SGN-E739389 879 1 879 C09SLf0041H22.1 35635 31362 32240 1 878, 0, 31362, 874 5 0 1 0 0 0 0 - SGN-E707725 880 0 880 C09SLf0041H22.1 35635 11481 12361 1 880, 0, 11481, 828 0 0 0 0 0 0 0 - SGN-E708875 833 5 833 C09SLf0041H22.1 35635 10646 11474 1 828, 0, 10646, 793 5 0 0 0 0 0 0 - SGN-E710979 798 0 798 C09SLf0041H22.1 35635 11497 12295 1 798, 0, 11497, 118 10 0 0 0 0 0 0 + SGN-E711508 660 131 259 C09SLf0041H22.1 35635 25449 25577 1 128, 131, 25449, 30 0 0 0 0 0 0 0 - SGN-E244201 560 286 316 C09SLf0041H22.1 35635 27549 27579 1 30, 244, 27549, 502 1 0 0 0 0 0 0 - SGN-E266943 503 0 503 C09SLf0041H22.1 35635 11788 12291 1 503, 0, 11788, 461 2 0 0 0 0 0 0 + SGN-E285441 463 0 463 C09SLf0041H22.1 35635 8569 9032 1 463, 0, 8569, 507 0 0 0 0 0 0 0 + SGN-E296330 517 0 507 C09SLf0041H22.1 35635 8576 9083 1 507, 0, 8576, 592 0 0 0 0 0 0 0 - SGN-E301348 592 0 592 C09SLf0041H22.1 35635 11479 12071 1 592, 0, 11479, 441 0 0 0 0 0 2 327 + SGN-E302951 441 0 441 C09SLf0041H22.1 35635 7802 8570 3 44,155,242, 0,44,199, 7802,7937,8328, 313 0 0 0 0 0 0 0 - SGN-E303962 313 0 313 C09SLf0041H22.1 35635 12025 12338 1 313, 0, 12025, 570 0 0 0 0 0 1 92 + SGN-E330039 570 0 570 C09SLf0041H22.1 35635 6838 7500 2 20,550, 0,20, 6838,6950, 559 0 0 0 0 0 0 0 + SGN-E331795 559 0 559 C09SLf0041H22.1 35635 2229 2788 1 559, 0, 2229, 469 11 0 0 0 0 0 0 - SGN-E326159 480 0 480 C09SLf0041H22.1 35635 11825 12305 1 480, 0, 11825, 46 0 0 0 1 5 2 19 + SGN-E327081 536 21 72 C09SLf0041H22.1 35635 27505 27570 3 9,13,24, 21,30,48, 27505,27530,27546, 445 1 0 1 0 0 0 0 - SGN-E313719 489 42 489 C09SLf0041H22.1 35635 26308 26755 1 447, 0, 26308, 546 0 0 0 0 0 0 0 - SGN-E341555 546 0 546 C09SLf0041H22.1 35635 11090 11636 1 546, 0, 11090, 748 1 0 2 0 0 0 0 - SGN-E346232 751 0 751 C09SLf0041H22.1 35635 10908 11659 1 751, 0, 10908, 470 1 0 0 3 5 1 1 - SGN-E341786 476 0 476 C09SLf0041H22.1 35635 11932 12404 4 266,136,29,40, 0,267,404,436, 11932,12198,12334,12364, 645 9 0 0 1 1 0 0 - SGN-E341924 655 0 655 C09SLf0041H22.1 35635 11750 12404 2 60,594, 0,61, 11750,11810, 41 0 0 0 1 9 1 232 - SGN-E357537 418 368 418 C09SLf0041H22.1 35635 27298 27571 2 12,29, 0,21, 27298,27542, 154 0 0 0 0 0 0 0 + SGN-E350865 730 217 371 C09SLf0041H22.1 35635 29387 29541 1 154, 217, 29387, 372 8 0 0 0 0 0 0 - SGN-E362105 380 0 380 C09SLf0041H22.1 35635 16454 16834 1 380, 0, 16454, 453 9 0 0 0 0 0 0 - SGN-E365026 462 0 462 C09SLf0041H22.1 35635 16391 16853 1 462, 0, 16391, 531 10 0 0 0 0 0 0 - SGN-E365170 541 0 541 C09SLf0041H22.1 35635 16300 16841 1 541, 0, 16300, 492 10 0 0 0 0 0 0 - SGN-E363325 502 0 502 C09SLf0041H22.1 35635 16336 16838 1 502, 0, 16336, 439 15 0 0 0 0 0 0 - SGN-E359710 454 0 454 C09SLf0041H22.1 35635 16391 16845 1 454, 0, 16391, 397 14 0 0 0 0 0 0 - SGN-E360646 411 0 411 C09SLf0041H22.1 35635 16432 16843 1 411, 0, 16432, 319 26 0 0 0 0 0 0 - SGN-E360381 345 0 345 C09SLf0041H22.1 35635 16553 16898 1 345, 0, 16553, 462 14 0 0 0 0 0 0 - SGN-E360011 476 0 476 C09SLf0041H22.1 35635 16357 16833 1 476, 0, 16357,