psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 607 1 0 0 0 0 0 0 + SGN-E553752 619 0 608 C09SLf0060H24.1 39405 10410 11018 1 608, 0, 10410, 606 0 0 0 1 1 0 0 + SGN-E553871 607 0 607 C09SLf0060H24.1 39405 10409 11015 2 527,79, 0,528, 10409,10936, 305 0 0 0 0 0 1 74 - SGN-E551553 447 0 305 C09SLf0060H24.1 39405 14439 14818 2 290,15, 142,432, 14439,14803, 180 8 0 0 3 70 2 29 - SGN-E551553 447 43 301 C09SLf0060H24.1 39405 11374 11591 4 121,17,20,30, 146,270,345,374, 11374,11496,11541,11561, 608 0 0 0 0 0 0 0 + SGN-E551559 620 0 608 C09SLf0060H24.1 39405 10410 11018 1 608, 0, 10410, 224 0 0 0 0 0 0 0 + SGN-E552461 535 300 524 C09SLf0060H24.1 39405 10794 11018 1 224, 300, 10794, 459 1 0 0 0 0 0 0 + SGN-E212403 473 0 460 C09SLf0060H24.1 39405 10558 11018 1 460, 0, 10558, 655 2 0 0 0 0 8 3172 + SGN-E578099 714 0 657 C09SLf0060H24.1 39405 35192 39021 9 23,86,67,96,100,47,84,54,100, 0,23,109,176,272,372,419,503,557, 35192,35329,36605,36884,37698,37949,38079,38263,38921, 395 0 0 0 0 0 0 0 + SGN-E557055 508 0 395 C09SLf0060H24.1 39405 10623 11018 1 395, 0, 10623, 586 0 0 0 0 0 1 1 + SGN-E309170 586 0 586 C09SLf0060H24.1 39405 10407 10994 2 454,132, 0,454, 10407,10862, 394 4 0 0 2 2 4 287 + SGN-E538224 400 0 400 C09SLf0060H24.1 39405 16945 17630 7 58,15,81,85,117,24,18, 0,59,75,156,241,358,382, 16945,17003,17018,17191,17396,17587,17612, 640 0 0 0 0 0 5 642 - SGN-E729264 648 8 648 C09SLf0060H24.1 39405 15101 16383 6 123,106,83,128,87,113, 0,123,229,312,440,527, 15101,15320,15523,15689,16095,16270, 787 12 0 0 0 0 7 1308 - SGN-E731841 799 0 799 C09SLf0060H24.1 39405 15385 17492 8 41,83,128,87,111,168,85,96, 0,41,124,252,339,450,618,703, 15385,15523,15689,16095,16270,16931,17191,17396, 454 34 0 0 0 0 0 0 + SGN-E723470 497 9 497 C09SLf0060H24.1 39405 10329 10817 1 488, 9, 10329, 856 2 0 0 1 1 8 1285 - SGN-E697255 859 0 859 C09SLf0060H24.1 39405 15124 17267 10 28,12,59,106,83,128,87,111,168,76, 0,28,41,100,206,289,417,504,615,783, 15124,15153,15165,15320,15523,15689,16095,16270,16931,17191, 581 7 0 0 1 2 5 951 - SGN-E699498 597 7 597 C09SLf0060H24.1 39405 16294 17833 6 88,165,85,117,77,56, 0,90,255,340,457,534, 16294,16934,17191,17396,17587,17777, 529 0 0 0 0 0 6 1868 + SGN-E700797 816 7 536 C09SLf0060H24.1 39405 36626 39023 7 46,96,100,47,84,54,102, 7,53,149,249,296,380,434, 36626,36884,37698,37949,38079,38263,38921, 408 5 0 0 0 0 0 0 + SGN-E243257 413 0 413 C09SLf0060H24.1 39405 10418 10831 1 413, 0, 10418, 382 0 0 0 0 0 4 938 + SGN-E251525 461 0 382 C09SLf0060H24.1 39405 37701 39021 5 97,47,84,54,100, 0,97,144,228,282, 37701,37949,38079,38263,38921, 384 0 0 0 0 0 4 938 + SGN-E251227 615 0 384 C09SLf0060H24.1 39405 37701 39023 5 97,47,84,54,102, 0,97,144,228,282, 37701,37949,38079,38263,38921, 382 2 0 0 0 0 4 938 + SGN-E251228 689 0 384 C09SLf0060H24.1 39405 37701 39023 5 97,47,84,54,102, 0,97,144,228,282, 37701,37949,38079,38263,38921, 221 3 0 0 0 0 2 234 + SGN-E260425 224 0 224 C09SLf0060H24.1 39405 37701 38159 3 97,47,80, 0,97,144, 37701,37949,38079, 359 5 0 0 0 0 3 227 + SGN-E269003 408 44 408 C09SLf0060H24.1 39405 14528 15119 4 191,5,126,42, 44,235,240,366, 14528,14757,14798,15077, 580 5 0 0 0 0 0 0 + SGN-E266444 585 0 585 C09SLf0060H24.1 39405 10413 10998 1 585, 0, 10413, 606 2 0 0 0 0 0 0 + SGN-E266236 619 0 608 C09SLf0060H24.1 39405 10413 11021 1 608, 0, 10413, 679 1 0 0 0 0 6 1192 - SGN-E276930 680 0 680 C09SLf0060H24.1 39405 15184 17056 7 40,106,83,128,87,111,125, 0,40,146,229,357,444,555, 15184,15320,15523,15689,16095,16270,16931, 523 0 0 0 0 0 0 0 + SGN-E287327 532 0 523 C09SLf0060H24.1 39405 10441 10964 1 523, 0, 10441, 692 0 0 0 1 4 7 2709 + SGN-E334411 697 0 696 C09SLf0060H24.1 39405 32005 35406 8 157,145,75,90,80,70,67,8, 0,157,302,377,467,547,617,688, 32005,32240,33313,34086,34473,35145,35329,35398, 695 0 0 0 0 0 7 2708 + SGN-E334207 697 0 695 C09SLf0060H24.1 39405 32005 35408 8 157,145,75,90,80,70,63,15, 0,157,302,377,467,547,617,680, 32005,32240,33313,34086,34473,35145,35329,35393, 516 0 0 0 0 0 4 2001 + SGN-E313105 516 0 516 C09SLf0060H24.1 39405 32035 34552 5 127,145,75,90,79, 0,127,272,347,437, 32035,32240,33313,34086,34473, 605 11 0 1 1 1 6 2708 + SGN-E316302 618 0 618 C09SLf0060H24.1 39405 32038 35363 7 124,145,75,90,80,69,34, 0,124,269,344,434,515,584, 32038,32240,33313,34086,34473,35146,35329, 786 1 0 0 0 0 9 4119 + SGN-E316393 787 0 787 C09SLf0060H24.1 39405 32042 36948 10 120,145,75,90,80,70,86,58,51,12, 0,120,265,340,430,510,580,666,724,775, 32042,32240,33313,34086,34473,35145,35329,36614,36884,36936, 151 13 0 0 0 0 1 137 - SGN-E335703 408 244 408 C09SLf0060H24.1 39405 22486 22787 2 35,129, 0,35, 22486,22658, 523 5 0 4 0 0 0 0 + SGN-E348694 532 0 532 C09SLf0060H24.1 39405 10461 10993 1 532, 0, 10461, 605 0 0 0 0 0 0 0 + SGN-E352697 615 0 605 C09SLf0060H24.1 39405 10413 11018 1 605, 0, 10413, 498 0 0 0 0 0 0 0 + SGN-E352159 528 0 498 C09SLf0060H24.1 39405 10518 11016 1 498, 0, 10518, 591 0 0 0 0 0 0 0 + SGN-E354030 592 0 591 C09SLf0060H24.1 39405 10413 11004 1 591, 0, 10413, 580 9 0 0 0 0 0 0 + SGN-E357600 589 0 589 C09SLf0060H24.1 39405 10409 10998 1 589, 0, 10409, 540 0 0 0 0 0 0 0 + SGN-E357825 540 0 540 C09SLf0060H24.1 39405 10416 10956 1 540, 0, 10416, 501 5 0 0 1 1 0 0 - SGN-E367458 507 0 507 C09SLf0060H24.1 39405 22010 22516 2 64,442, 0,65, 22010,22074, 568 13 0 0 2 2 3 113 + SGN-E689717 587 4 587 C09SLf0060H24.1 39405 10441 11135 5 404,44,44,82,7, 4,409,454,498,580, 10441,10845,10891,10936,11128, 545 18 0 0 4 13 4 14 + SGN-E693557 588 0 576 C09SLf0060H24.1 39405 10441 11018 6 404,44,44,33,30,8, 0,405,450,501,538,568, 10441,10845,10891,10943,10979,11010,