psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 74 0 0 0 0 0 0 0 - SGN-E746858 793 0 74 C09SLf0096M01.1 34213 1567 1641 1 74, 719, 1567, 710 0 0 0 0 0 1 221 - SGN-E555482 710 0 710 C09SLf0096M01.1 34213 32742 33673 2 445,265, 0,445, 32742,33408, 546 0 0 0 0 0 1 22 - SGN-E210164 553 0 546 C09SLf0096M01.1 34213 27975 28543 2 8,538, 7,15, 27975,28005, 594 0 0 1 0 0 1 221 - SGN-E322042 595 0 595 C09SLf0096M01.1 34213 32754 33570 2 433,162, 0,433, 32754,33408, 693 0 0 2 0 0 1 221 - SGN-E322988 701 0 695 C09SLf0096M01.1 34213 32729 33645 2 458,237, 6,464, 32729,33408, 74 0 0 0 0 0 0 0 - SGN-E316723 559 0 74 C09SLf0096M01.1 34213 1567 1641 1 74, 485, 1567, 305 1 0 0 0 0 0 0 + SGN-E370047 306 0 306 C09SLf0096M01.1 34213 11894 12200 1 306, 0, 11894, 469 10 0 0 0 0 0 0 - SGN-E371817 506 0 479 C09SLf0096M01.1 34213 24995 25474 1 479, 27, 24995, 478 0 0 0 0 0 0 0 - SGN-E371818 506 0 478 C09SLf0096M01.1 34213 24995 25473 1 478, 28, 24995, 340 0 0 0 0 0 1 221 - SGN-E391388 340 0 340 C09SLf0096M01.1 34213 33112 33673 2 75,265, 0,75, 33112,33408, 150 3 0 0 0 0 0 0 - SGN-E237819 153 0 153 C09SLf0096M01.1 34213 33519 33672 1 153, 0, 33519, 72 0 0 0 0 0 0 0 - SGN-E233172 574 0 72 C09SLf0096M01.1 34213 1567 1639 1 72, 502, 1567, 741 0 0 0 0 0 1 221 - SGN-E719523 821 29 770 C09SLf0096M01.1 34213 32724 33686 2 463,278, 51,514, 32724,33408, 51 0 0 0 0 0 0 0 - SGN-E717935 760 11 62 C09SLf0096M01.1 34213 1567 1618 1 51, 698, 1567, 68 2 0 0 0 0 0 0 - SGN-E719772 802 29 99 C09SLf0096M01.1 34213 1567 1637 1 70, 703, 1567, 732 1 0 0 0 0 1 221 - SGN-E719891 780 1 734 C09SLf0096M01.1 34213 32732 33686 2 455,278, 46,501, 32732,33408, 76 1 0 0 0 0 0 0 - SGN-E723241 610 0 77 C09SLf0096M01.1 34213 1567 1644 1 77, 533, 1567, 718 1 0 0 0 0 1 221 - SGN-E723428 748 29 748 C09SLf0096M01.1 34213 32743 33683 2 444,275, 0,444, 32743,33408, 762 6 0 1 0 0 1 221 - SGN-E724162 802 29 798 C09SLf0096M01.1 34213 32719 33709 2 468,301, 4,472, 32719,33408, 86 0 0 0 0 0 0 0 - SGN-E724442 774 20 106 C09SLf0096M01.1 34213 1567 1653 1 86, 668, 1567, 744 3 0 1 0 0 1 221 - SGN-E725010 798 26 774 C09SLf0096M01.1 34213 32724 33693 2 463,285, 24,487, 32724,33408, 44 0 0 0 0 0 0 0 - SGN-E732510 648 0 44 C09SLf0096M01.1 34213 1567 1611 1 44, 604, 1567, 44 0 0 0 0 0 0 0 - SGN-E733433 647 0 44 C09SLf0096M01.1 34213 1567 1611 1 44, 603, 1567, 46 0 0 0 0 0 0 0 - SGN-E733777 742 1 47 C09SLf0096M01.1 34213 1567 1613 1 46, 695, 1567, 69 0 0 0 0 0 0 0 - SGN-E734252 688 0 69 C09SLf0096M01.1 34213 1567 1636 1 69, 619, 1567, 66 0 0 0 0 0 0 0 - SGN-E734730 776 0 66 C09SLf0096M01.1 34213 1567 1633 1 66, 710, 1567, 551 0 0 0 0 0 1 221 - SGN-E738115 567 0 551 C09SLf0096M01.1 34213 32734 33506 2 453,98, 16,469, 32734,33408, 550 1 0 0 0 0 1 221 - SGN-E738549 567 0 551 C09SLf0096M01.1 34213 32734 33506 2 453,98, 16,469, 32734,33408, 551 0 0 0 0 0 1 221 - SGN-E738744 567 0 551 C09SLf0096M01.1 34213 32734 33506 2 453,98, 16,469, 32734,33408, 71 0 0 0 0 0 0 0 - SGN-E708531 773 0 71 C09SLf0096M01.1 34213 1567 1638 1 71, 702, 1567, 644 0 0 0 1 1 1 868 - SGN-E709373 650 0 645 C09SLf0096M01.1 34213 26800 28312 3 37,300,307, 5,43,343, 26800,26837,28005, 42 0 0 0 0 0 1 1 - SGN-E712271 654 0 42 C09SLf0096M01.1 34213 1567 1610 2 16,26, 612,628, 1567,1584, 438 1 0 0 0 0 0 0 - SGN-E713008 466 0 439 C09SLf0096M01.1 34213 24994 25433 1 439, 27, 24994, 868 0 0 0 0 0 3 1085 - SGN-E713590 868 0 868 C09SLf0096M01.1 34213 24994 26947 4 50,590,218,10, 0,50,640,858, 24994,25045,26718,26937, 630 0 0 0 0 0 1 221 - SGN-E716617 649 4 634 C09SLf0096M01.1 34213 32724 33575 2 463,167, 15,478, 32724,33408, 315 1 0 0 0 0 0 0 - SGN-E243061 324 0 316 C09SLf0096M01.1 34213 32732 33048 1 316, 8, 32732, 54 0 0 0 0 0 0 0 - SGN-E245445 610 0 54 C09SLf0096M01.1 34213 1567 1621 1 54, 556, 1567, 61 1 0 0 0 0 0 0 - SGN-E250785 559 0 62 C09SLf0096M01.1 34213 1567 1629 1 62, 497, 1567, 663 0 0 0 0 0 1 221 - SGN-E252034 672 0 663 C09SLf0096M01.1 34213 32732 33616 2 455,208, 9,464, 32732,33408, 54 0 0 0 0 0 0 0 - SGN-E252120 603 542 596 C09SLf0096M01.1 34213 1567 1621 1 54, 7, 1567, 93 4 0 0 1 42 2 73 + SGN-E253500 468 73 212 C09SLf0096M01.1 34213 2195 2365 3 25,30,42, 73,98,170, 2195,2272,2323, 130 0 0 0 0 0 0 0 + SGN-E255075 437 0 130 C09SLf0096M01.1 34213 12178 12308 1 130, 0, 12178, 414 0 0 0 0 0 0 0 + SGN-E259743 471 0 414 C09SLf0096M01.1 34213 11894 12308 1 414, 0, 11894, 454 4 0 0 1 1 0 0 - SGN-E257313 459 0 459 C09SLf0096M01.1 34213 28072 28530 2 305,153, 0,306, 28072,28377, 413 0 0 0 0 0 0 0 + SGN-E263107 413 0 413 C09SLf0096M01.1 34213 11894 12307 1 413, 0, 11894, 51 0 0 0 0 0 0 0 - SGN-E263323 615 0 51 C09SLf0096M01.1 34213 1567 1618 1 51, 564, 1567, 62 0 0 0 0 0 0 0 - SGN-E265175 550 0 62 C09SLf0096M01.1 34213 1567 1629 1 62, 488, 1567, 539 5 0 0 0 0 1 221 + SGN-E266003 567 23 567 C09SLf0096M01.1 34213 32724 33489 2 463,81, 23,486, 32724,33408, 453 1 0 0 1 1 0 0 - SGN-E220947 471 0 455 C09SLf0096M01.1 34213 32719 33173 2 370,84, 16,387, 32719,33089, 362 2 0 0 1 1 0 0 - SGN-E229514 372 0 365 C09SLf0096M01.1 34213 32719 33083 2 89,275, 7,97, 32719,32808, 412 0 0 0 0 0 0 0 - SGN-E229659 419 0 412 C09SLf0096M01.1 34213 32719 33131 1 412, 7, 32719, 65 2 0 0 0 0 0 0 - SGN-E272411 411 0 67 C09SLf0096M01.1 34213 1567 1634 1 67, 344, 1567, 582 0 0 1 0 0 1 221 - SGN-E279415 583 0 583 C09SLf0096M01.1 34213 32812 33616 2 375,208, 0,375, 32812,33408, 475 0 0 0 0 0 0 0 - SGN-E283184 475 0 475 C09SLf0096M01.1 34213 24998 25473 1 475, 0, 24998, 50 0 0 0 0 0 0 0 - SGN-E277662 396 0 50 C09SLf0096M01.1 34213 1567 1617 1 50, 346, 1567, 38 0 0 0 0 0 0 0 - SGN-E289550 152 0 38 C09SLf0096M01.1 34213 1567 1605 1 38, 114, 1567, 76 0 0 0 0 0 0 0 - SGN-E299729 564 0 76 C09SLf0096M01.1 34213 1567 1643 1 76, 488, 1567, 73 0 0 0 0 0 0 0 - SGN-E304698 561 0 73 C09SLf0096M01.1 34213 1567 1640 1 73, 488, 1567, 470 0 0 0 0 0 1 868 - SGN-E304627 470 0 470 C09SLf0096M01.1 34213 26740 28078 2 397,73, 0,397, 26740,28005, 75 0 0 0 0 0 0 0 - SGN-E306577 468 0 75 C09SLf0096M01.1 34213 1567 1642 1 75, 393, 1567, 36 0 0 0 1 4 1 3 - SGN-E327705 730 0 40 C09SLf0096M01.1 34213 11632 11671 2 10,26, 690,704, 11632,11645, 36 0 0 0 1 4 1 3 - SGN-E328803 582 0 40 C09SLf0096M01.1 34213 11632 11671 2 10,26, 542,556, 11632,11645, 483 0 0 0 0 0 1 221 - SGN-E323829 483 0 483 C09SLf0096M01.1 34213 32940 33644 2 247,236, 0,247, 32940,33408, 714 5 0 0 0 0 3 3 - SGN-E316038 721 0 719 C09SLf0096M01.1 34213 921 1643 4 21,20,58,620, 2,23,43,101, 921,943,964,1023, 665 0 0 0 1 1 2 1084 - SGN-E337768 666 0 666 C09SLf0096M01.1 34213 25223 26972 4 80,6,325,254, 0,80,87,412, 25223,25304,25310,26718, 646 1 0 0 6 6 0 0 - SGN-E342086 677 16 669 C09SLf0096M01.1 34213 24988 25635 7 9,59,10,11,72,237,249, 8,18,78,89,101,174,412, 24988,24997,25056,25066,25077,25149,25386, 67 0 0 0 0 0 0 0 - SGN-E342973 697 0 67 C09SLf0096M01.1 34213 1567 1634 1 67, 630, 1567, 44 0 0 0 0 0 0 0 - SGN-E343141 659 0 44 C09SLf0096M01.1 34213 1567 1611 1 44, 615, 1567, 672 4 0 1 2 3 4 224 - SGN-E347117 680 0 680 C09SLf0096M01.1 34213 32765 33666 6 7,6,6,68,332,258, 0,7,13,21,90,422, 32765,32773,32780,32787,32855,33408, 704 0 0 0 1 1 1 221 - SGN-E348162 711 0 705 C09SLf0096M01.1 34213 32724 33649 3 143,320,241, 6,150,470, 32724,32867,33408, 705 2 0 2 8 9 2 222 - SGN-E346538 722 0 718 C09SLf0096M01.1 34213 32699 33630 10 9,77,44,31,326,137,10,25,6,44, 4,15,93,138,170,496,634,645,671,678, 32699,32709,32786,32830,32861,33408,33545,33555,33580,33586, 710 0 0 0 0 0 9 3041 + SGN-E340241 710 0 710 C09SLf0096M01.1 34213 16582 20333 10 26,126,124,74,45,51,69,59,70,66, 0,26,152,276,350,395,446,515,574,644, 16582,17085,18021,18407,18958,19202,19324,19586,19842,20267, 699 1 0 0 1 1 1 221 - SGN-E347908 710 0 701 C09SLf0096M01.1 34213 32724 33645 3 136,327,237, 9,146,473, 32724,32860,33408, 664 2 0 2 0 0 1 221 - SGN-E340925 674 0 668 C09SLf0096M01.1 34213 32754 33643 2 433,235, 6,439, 32754,33408, 701 2 0 2 4 5 2 222 - SGN-E341738 717 0 710 C09SLf0096M01.1 34213 32724 33651 6 8,51,52,25,326,243, 7,17,69,122,148,474, 32724,32733,32784,32836,32861,33408, 683 1 0 2 0 0 3 223 - SGN-E350247 686 0 686 C09SLf0096M01.1 34213 32756 33665 4 13,30,386,257, 0,13,43,429, 32756,32770,32801,33408, 531 18 0 0 2 7 2 873 - SGN-E365657 556 0 556 C09SLf0096M01.1 34213 27074 28496 4 63,247,108,131, 0,63,313,425, 27074,28005,28252,28365, 529 6 0 0 0 0 1 868 - SGN-E364856 535 0 535 C09SLf0096M01.1 34213 26827 28230 2 310,225, 0,310, 26827,28005, 571 8 0 0 0 0 1 868 - SGN-E364790 579 0 579 C09SLf0096M01.1 34213 26783 28230 2 354,225, 0,354, 26783,28005, 455 6 0 0 0 0 1 868 - SGN-E367156 461 0 461 C09SLf0096M01.1 34213 26871 28200 2 266,195, 0,266, 26871,28005, 37 1 0 0 1 6 1 7 - SGN-E367594 579 451 495 C09SLf0096M01.1 34213 22833 22878 2 18,20, 84,108, 22833,22858, 607 6 0 0 1 3 1 868 - SGN-E360968 616 0 616 C09SLf0096M01.1 34213 26843 28324 3 294,247,72, 0,294,544, 26843,28005,28252, 711 8 0 0 0 0 1 221 - SGN-E690574 723 4 723 C09SLf0096M01.1 34213 32724 33664 2 463,256, 0,463, 32724,33408, 696 28 0 0 0 0 1 221 - SGN-E694414 743 0 724 C09SLf0096M01.1 34213 32719 33664 2 468,256, 19,487, 32719,33408, 697 12 0 0 0 0 2 222 - SGN-E694871 836 114 823 C09SLf0096M01.1 34213 32719 33650 3 8,459,242, 13,21,480, 32719,32728,33408, 695 5 0 0 1 8 3 231 - SGN-E694872 861 139 847 C09SLf0096M01.1 34213 32719 33650 4 8,21,429,242, 14,22,51,480, 32719,32728,32758,33408, 529 9 0 0 0 0 6 2290 + SGN-E358799 538 0 538 C09SLf0096M01.1 34213 16515 19343 7 93,132,124,74,45,51,19, 0,93,225,349,423,468,519, 16515,17079,18021,18407,18958,19202,19324,