psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 318 19 0 0 3 14 3 42 + SGN-U313328 1289 513 864 C09SLe0019J03.3 44036 39080 39459 6 17,26,103,59,43,89, 513,530,556,665,730,775, 39080,39106,39160,39263,39327,39370, 38 0 0 0 0 0 0 0 + SGN-U314410 682 556 594 C09SLe0019J03.3 44036 39080 39118 1 38, 556, 39080, 67 5 0 0 0 0 0 0 + SGN-U315762 1094 1014 1086 C09SLe0019J03.3 44036 39080 39152 1 72, 1014, 39080, 102 5 0 0 1 44 3 24 - SGN-U317986 1842 1675 1826 C09SLe0019J03.3 44036 39344 39475 4 25,12,37,33, 16,41,97,134, 39344,39370,39384,39442, 739 1 0 0 0 0 3 3799 + SGN-U319657 777 0 740 C09SLe0019J03.3 44036 30746 35285 4 206,53,101,380, 0,206,259,360, 30746,31040,31676,34905, 261 0 0 0 0 0 1 3167 + SGN-U319970 555 0 261 C09SLe0019J03.3 44036 40608 44036 2 192,69, 0,192, 40608,43967, 1124 28 0 0 2 10 3 23 + SGN-U319971 1408 23 1185 C09SLe0019J03.3 44036 42861 44036 5 149,207,186,69,541, 23,181,388,574,644, 42861,43020,43228,43426,43495, 36 1 0 0 0 0 0 0 + SGN-U327143 648 607 644 C09SLe0019J03.3 44036 39081 39118 1 37, 607, 39081, 198 6 0 0 1 20 4 4431 - SGN-U327164 656 432 656 C09SLe0019J03.3 44036 8237 12872 5 23,22,4,98,57, 0,23,45,69,167, 8237,8291,8314,8325,12815, 50 0 0 0 1 1 0 0 + SGN-U329159 453 381 432 C09SLe0019J03.3 44036 39080 39130 2 46,4, 381,428, 39080,39126, 372 0 0 0 0 0 1 253 - SGN-U329517 404 0 372 C09SLe0019J03.3 44036 23123 23748 2 276,96, 32,308, 23123,23652, 56 3 0 0 0 0 0 0 - SGN-U330400 739 244 303 C09SLe0019J03.3 44036 5013 5072 1 59, 436, 5013, 647 0 0 0 0 0 3 1448 + SGN-U330971 759 0 647 C09SLe0019J03.3 44036 20616 22711 4 72,200,135,240, 0,72,272,407, 20616,21644,22221,22471, 40 0 0 0 0 0 0 0 + SGN-U333249 377 319 359 C09SLe0019J03.3 44036 39081 39121 1 40, 319, 39081, 206 11 0 0 3 31 2 25 + SGN-U334276 506 257 505 C09SLe0019J03.3 44036 39080 39322 4 66,5,84,62, 257,324,336,443, 39080,39146,39159,39260, 97 8 0 0 0 0 0 0 - SGN-U334277 387 282 387 C09SLe0019J03.3 44036 39370 39475 1 105, 0, 39370, 254 5 0 0 0 0 1 88 + SGN-U336890 440 0 259 C09SLe0019J03.3 44036 30747 31094 2 205,54, 0,205, 30747,31040, 151 10 0 0 0 0 0 0 - SGN-U336985 548 357 518 C09SLe0019J03.3 44036 40639 40800 1 161, 30, 40639, 323 3 0 173 0 0 0 0 - SGN-U340760 499 0 499 C09SLe0019J03.3 44036 29895 30394 1 499, 0, 29895, 552 7 0 0 1 1 4 2159 - SGN-U342983 560 0 560 C09SLe0019J03.3 44036 25052 27770 6 139,76,249,14,54,27, 0,139,215,464,479,533, 25052,25899,26731,27225,27239,27743, 34 1 0 0 0 0 0 0 - SGN-U343620 465 386 421 C09SLe0019J03.3 44036 891 926 1 35, 44, 891, 46 1 0 0 0 0 0 0 + SGN-U345977 514 9 56 C09SLe0019J03.3 44036 39426 39473 1 47, 9, 39426, 570 1 0 0 1 1 3 2070 + SGN-U346714 572 0 572 C09SLe0019J03.3 44036 17054 19695 5 44,94,204,161,68, 0,45,139,343,504, 17054,17098,17469,18746,19627,