SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 356 29.2 3.0 2.4 C09HBa0116C14.2 1847 2011 (107861) + HATSOD1 Unknown 3647 3812 (980) 1 531 27.4 6.3 5.6 C09HBa0116C14.2 5431 5732 (104140) + Copia00139 Copia 3866 4169 (32) 2 * 547 23.8 5.8 3.7 C09HBa0116C14.2 5701 5888 (103984) + Unknown00020 Unknown 168 359 (4846) 3 606 17.8 0.0 3.3 C09HBa0116C14.2 6570 6691 (103181) C Copia00172 Copia (1315) 5312 5195 4 383 22.7 4.3 5.2 C09HBa0116C14.2 6918 7033 (102839) + Copia00172 Copia 5199 5313 (1314) 5 559 20.6 3.2 2.5 C09HBa0116C14.2 9761 9987 (99885) C Copia00105 Copia (17) 8840 8568 6 781 17.0 3.1 0.6 C09HBa0116C14.2 10945 11104 (98768) C Copia00172 Copia (5134) 1493 1330 7 440 26.7 10.6 2.9 C09HBa0116C14.2 11125 11332 (98540) C TS2 Unknown (29) 626 403 8 283 28.3 0.4 2.5 C09HBa0116C14.2 13238 13370 (96502) + Gypsy00208 Gypsy 2522 8017 (38) 9 410 12.0 0.0 6.2 C09HBa0116C14.2 14226 14305 (95567) C Copia00133 Copia (4644) 75 1 10 640 23.8 7.3 2.3 C09HBa0116C14.2 14715 14933 (94939) + Copia00175 Copia 2327 2556 (4490) 11 231 32.0 0.0 0.0 C09HBa0116C14.2 16623 16700 (93172) C Unknown00043 Unknown (9283) 2041 1964 12 715 19.5 5.2 1.6 C09HBa0116C14.2 19837 20029 (89843) + Unknown00043 Unknown 1842 2041 (9283) 13 536 13.1 2.6 1.4 C09HBa0116C14.2 22198 22314 (87558) + SONATA2 Unknown 1 123 (120) 14 1878 14.1 0.3 0.0 C09HBa0116C14.2 25398 25695 (84177) + Copia00110 Copia 2419 2717 (11415) 15 459 28.3 2.4 5.7 C09HBa0116C14.2 25486 25732 (84140) + Unknown00046 Unknown 2943 3181 (6863) 16 * 401 30.9 1.6 0.0 C09HBa0116C14.2 31387 31509 (78363) + Unknown00043 Unknown 1929 2053 (9271) 17 1975 13.4 4.3 0.3 C09HBa0116C14.2 38537 38858 (71014) + Unknown00034 Unknown 3691 4025 (5052) 18 885 14.9 0.6 1.8 C09HBa0116C14.2 38715 38878 (70994) C Copia00094 Copia (1144) 4465 4304 19 * 673 28.1 5.7 7.0 C09HBa0116C14.2 47711 47892 (61980) + Copia00110 Copia 1919 2367 (11765) 20 866 25.7 4.0 2.9 C09HBa0116C14.2 47893 48165 (61707) + Unknown00020 Unknown 1 276 (4929) 21 826 19.7 0.5 3.7 C09HBa0116C14.2 48174 48363 (61509) C SINE_SO Unknown (5) 184 1 22 250 25.3 4.0 9.9 C09HBa0116C14.2 65778 65878 (43994) + Gypsy00022 Gypsy 912 1006 (9111) 23 241 30.8 0.9 0.9 C09HBa0116C14.2 66606 66710 (43162) C TS2 Unknown (328) 327 223 24 1324 22.9 2.5 2.2 C09HBa0116C14.2 73584 73949 (35923) + Copia00107 Copia 364 730 (2307) 25 225 14.3 0.0 0.0 C09HBa0116C14.2 75604 75638 (34234) + HRS60_NT Unknown 27 61 (121) 26 226 23.8 4.4 6.7 C09HBa0116C14.2 107790 107924 (1948) C Copia00143 Copia (5111) 193 62 27 444 21.7 3.0 3.0 C09HBa0116C14.2 107927 108059 (1813) C Copia00143 Copia (5079) 225 93 28