psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 82 3 0 0 0 0 0 0 - SGN-E745858 2983 1354 1439 C10HBa0011E16.2 149342 137544 137629 1 85, 1544, 137544, 1793 35 0 0 2 13 0 0 - SGN-E746443 2528 0 1841 C10HBa0011E16.2 149342 68309 70137 3 540,1248,40, 687,1230,2488, 68309,68849,70097, 139 3 0 0 3 205 3 24 + SGN-E746426 1421 971 1318 C10HBa0011E16.2 149342 142188 142354 6 18,35,17,4,43,25, 971,1019,1054,1096,1100,1293, 142188,142206,142242,142281,142286,142329, 592 0 0 0 0 0 2 1949 - SGN-E688194 592 0 592 C10HBa0011E16.2 149342 115116 117657 3 387,69,136, 0,387,456, 115116,115610,117521, 86 5 0 0 1 105 1 102 + SGN-E552802 609 0 196 C10HBa0011E16.2 149342 141474 141667 2 73,18, 0,178, 141474,141649, 483 1 0 1 0 0 0 0 + SGN-E209289 485 0 485 C10HBa0011E16.2 149342 118882 119367 1 485, 0, 118882, 465 0 0 0 0 0 0 0 + SGN-E212615 465 0 465 C10HBa0011E16.2 149342 112340 112805 1 465, 0, 112340, 32 0 0 0 0 0 0 0 + SGN-E215060 595 548 580 C10HBa0011E16.2 149342 45119 45151 1 32, 548, 45119, 43 0 0 0 1 1 1 11 - SGN-E577578 736 76 120 C10HBa0011E16.2 149342 342 396 2 8,35, 616,625, 342,361, 363 22 0 0 0 0 0 0 - SGN-E318525 385 0 385 C10HBa0011E16.2 149342 69691 70076 1 385, 0, 69691, 43 2 0 0 0 0 0 0 + SGN-E318957 580 310 355 C10HBa0011E16.2 149342 67924 67969 1 45, 310, 67924, 30 0 0 0 0 0 0 0 - SGN-E378756 717 393 423 C10HBa0011E16.2 149342 45121 45151 1 30, 294, 45121, 30 0 0 0 0 0 0 0 - SGN-E378372 702 393 423 C10HBa0011E16.2 149342 45121 45151 1 30, 279, 45121, 552 14 0 0 0 0 0 0 - SGN-E368527 581 0 566 C10HBa0011E16.2 149342 120594 121160 1 566, 15, 120594, 585 6 0 0 0 0 5 2822 - SGN-E368528 591 0 591 C10HBa0011E16.2 149342 128164 131577 6 82,69,120,88,199,33, 0,82,151,271,359,558, 128164,128329,128484,130526,131268,131544, 34 1 0 0 0 0 0 0 + SGN-E374116 649 522 557 C10HBa0011E16.2 149342 45116 45151 1 35, 522, 45116, 31 0 0 0 0 0 0 0 - SGN-E390309 540 373 404 C10HBa0011E16.2 149342 52683 52714 1 31, 136, 52683, 253 5 0 0 0 0 0 0 - SGN-E394592 520 0 258 C10HBa0011E16.2 149342 68309 68567 1 258, 262, 68309, 38 0 0 0 1 10 1 6 + SGN-E395485 595 369 417 C10HBa0011E16.2 149342 45122 45166 2 30,8, 369,409, 45122,45158, 583 0 0 1 0 0 0 0 + SGN-E542843 584 0 584 C10HBa0011E16.2 149342 118842 119426 1 584, 0, 118842, 772 0 0 0 0 0 0 0 + SGN-E544627 788 0 772 C10HBa0011E16.2 149342 12263 13035 1 772, 0, 12263, 775 0 0 0 0 0 1 1 + SGN-E544628 786 0 775 C10HBa0011E16.2 149342 12263 13039 2 721,54, 0,721, 12263,12985, 709 12 0 0 0 0 3 921 - SGN-E546740 730 0 721 C10HBa0011E16.2 149342 42734 44376 4 437,199,24,61, 9,446,645,669, 42734,43510,44290,44315, 35 3 0 0 0 0 0 0 + SGN-E548178 802 717 755 C10HBa0011E16.2 149342 62774 62812 1 38, 717, 62774, 653 4 0 0 0 0 0 0 + SGN-E548780 667 0 657 C10HBa0011E16.2 149342 119028 119685 1 657, 0, 119028, 752 21 0 0 0 0 4 1135 - SGN-E549421 773 0 773 C10HBa0011E16.2 149342 42968 44876 5 203,199,176,113,82, 0,203,402,578,691, 42968,43510,44290,44680,44794, 592 0 0 0 0 0 2 1949 - SGN-E551254 592 0 592 C10HBa0011E16.2 149342 115116 117657 3 387,69,136, 0,387,456, 115116,115610,117521, 842 0 0 0 0 0 1 404 - SGN-E726811 842 0 842 C10HBa0011E16.2 149342 7960 9206 2 263,579, 0,263, 7960,8627, 786 16 0 0 0 0 0 0 - SGN-E729610 803 0 802 C10HBa0011E16.2 149342 69255 70057 1 802, 1, 69255, 823 0 0 0 1 1 1 404 - SGN-E730070 827 3 827 C10HBa0011E16.2 149342 7960 9187 3 70,193,560, 0,71,264, 7960,8030,8627, 804 0 0 0 0 0 1 404 - SGN-E730211 804 0 804 C10HBa0011E16.2 149342 7932 9140 2 291,513, 0,291, 7932,8627, 779 2 0 1 1 1 1 404 - SGN-E731040 799 16 799 C10HBa0011E16.2 149342 7988 9174 3 235,538,9, 0,235,774, 7988,8627,9165, 829 0 0 0 0 0 1 404 - SGN-E731723 829 0 829 C10HBa0011E16.2 149342 7977 9210 2 246,583, 0,246, 7977,8627, 802 1 0 1 0 0 1 1605 + SGN-E731856 804 0 804 C10HBa0011E16.2 149342 112319 114728 2 623,181, 0,623, 112319,114547, 34 2 0 0 0 0 0 0 + SGN-E719381 632 19 55 C10HBa0011E16.2 149342 253 289 1 36, 19, 253, 572 2 0 0 0 0 0 0 + SGN-E722081 574 0 574 C10HBa0011E16.2 149342 118889 119463 1 574, 0, 118889, 253 4 0 0 0 0 1 1707 + SGN-E723803 257 0 257 C10HBa0011E16.2 149342 10420 12384 2 95,162, 0,95, 10420,12222, 171 4 0 0 0 0 1 562 - SGN-E724094 175 0 175 C10HBa0011E16.2 149342 95821 96558 2 41,134, 0,41, 95821,96424, 527 0 0 1 0 0 0 0 + SGN-E733644 549 3 531 C10HBa0011E16.2 149342 119157 119685 1 528, 3, 119157, 528 0 0 0 0 0 0 0 + SGN-E733672 549 3 531 C10HBa0011E16.2 149342 119157 119685 1 528, 3, 119157, 527 0 0 1 0 0 0 0 + SGN-E733751 549 3 531 C10HBa0011E16.2 149342 119157 119685 1 528, 3, 119157, 526 0 0 0 0 0 0 0 + SGN-E734658 587 3 529 C10HBa0011E16.2 149342 119157 119683 1 526, 3, 119157, 476 0 0 0 0 0 0 0 + SGN-E734952 494 5 481 C10HBa0011E16.2 149342 119209 119685 1 476, 5, 119209, 31 0 0 0 0 0 0 0 + SGN-E698164 449 418 449 C10HBa0011E16.2 149342 58336 58367 1 31, 418, 58336, 797 19 0 0 1 3 0 0 - SGN-E699996 864 0 819 C10HBa0011E16.2 149342 68309 69125 2 540,276, 45,588, 68309,68849, 728 0 0 0 0 0 1 1 + SGN-E711375 737 6 734 C10HBa0011E16.2 149342 12347 13076 2 9,719, 6,15, 12347,12357, 850 1 0 0 0 0 0 0 + SGN-E714004 851 0 851 C10HBa0011E16.2 149342 118829 119680 1 851, 0, 118829, 39 1 0 0 0 0 0 0 + SGN-E714363 822 250 290 C10HBa0011E16.2 149342 40097 40137 1 40, 250, 40097, 854 1 0 1 0 0 0 0 + SGN-E714466 857 0 856 C10HBa0011E16.2 149342 118829 119685 1 856, 0, 118829, 619 0 0 0 0 0 2 1949 - SGN-E714564 628 0 619 C10HBa0011E16.2 149342 115075 117643 3 428,69,122, 9,437,506, 115075,115610,117521, 425 1 0 0 0 0 0 0 + SGN-E715081 485 0 426 C10HBa0011E16.2 149342 119257 119683 1 426, 0, 119257, 550 0 0 0 0 0 0 0 - SGN-E715186 580 0 550 C10HBa0011E16.2 149342 49981 50531 1 550, 30, 49981, 876 0 0 0 0 0 1 1 + SGN-E715563 906 0 876 C10HBa0011E16.2 149342 118799 119676 2 868,8, 0,868, 118799,119668, 39 0 0 0 0 0 1 7563 - SGN-E244201 560 284 323 C10HBa0011E16.2 149342 45122 52724 2 18,21, 237,255, 45122,52703, 39 1 0 0 0 0 0 0 + SGN-E244235 574 100 140 C10HBa0011E16.2 149342 40097 40137 1 40, 100, 40097, 574 1 0 0 0 0 5 2822 - SGN-E246346 575 0 575 C10HBa0011E16.2 149342 128180 131577 6 66,69,120,88,199,33, 0,66,135,255,343,542, 128180,128329,128484,130526,131268,131544, 270 1 0 0 0 0 1 906 - SGN-E245404 271 0 271 C10HBa0011E16.2 149342 121160 122337 2 149,122, 0,149, 121160,122215, 47 3 0 0 0 0 0 0 + SGN-E265310 569 345 395 C10HBa0011E16.2 149342 73333 73383 1 50, 345, 73333, 36 2 0 0 0 0 0 0 + SGN-E220230 503 196 234 C10HBa0011E16.2 149342 141531 141569 1 38, 196, 141531, 36 2 0 0 0 0 0 0 + SGN-E220664 368 61 99 C10HBa0011E16.2 149342 141531 141569 1 38, 61, 141531, 312 0 0 0 0 0 0 0 + SGN-E215711 335 0 312 C10HBa0011E16.2 149342 12789 13101 1 312, 0, 12789, 108 7 0 0 1 105 1 102 + SGN-E226896 468 14 234 C10HBa0011E16.2 149342 141450 141667 2 97,18, 14,216, 141450,141649, 231 0 0 0 0 0 0 0 + SGN-E226406 247 0 231 C10HBa0011E16.2 149342 141556 141787 1 231, 0, 141556, 302 2 0 0 0 0 0 0 + SGN-E226529 326 0 304 C10HBa0011E16.2 149342 141476 141780 1 304, 0, 141476, 478 0 0 0 0 0 0 0 + SGN-E227268 489 0 478 C10HBa0011E16.2 149342 12598 13076 1 478, 0, 12598, 441 0 0 0 0 0 0 0 + SGN-E227627 452 0 441 C10HBa0011E16.2 149342 12635 13076 1 441, 0, 12635, 34 0 0 0 1 3 0 0 + SGN-E227503 440 201 238 C10HBa0011E16.2 149342 4894 4928 2 10,24, 201,214, 4894,4904, 36 2 0 0 0 0 0 0 + SGN-E237004 464 156 194 C10HBa0011E16.2 149342 141531 141569 1 38, 156, 141531, 36 2 0 0 0 0 0 0 + SGN-E237229 446 138 176 C10HBa0011E16.2 149342 141531 141569 1 38, 138, 141531, 400 5 0 0 0 0 0 0 - SGN-E280061 412 0 405 C10HBa0011E16.2 149342 118834 119239 1 405, 7, 118834, 131 8 0 0 1 105 2 185 + SGN-E234158 423 0 244 C10HBa0011E16.2 149342 141343 141667 3 25,96,18, 0,25,226, 141343,141451,141649, 644 2 0 0 0 0 2 1949 - SGN-E272887 656 0 646 C10HBa0011E16.2 149342 115061 117656 3 442,69,135, 10,452,521, 115061,115610,117521, 210 0 0 0 0 0 0 0 + SGN-E280991 210 0 210 C10HBa0011E16.2 149342 112599 112809 1 210, 0, 112599, 83 5 0 0 1 105 1 102 + SGN-E292523 355 0 193 C10HBa0011E16.2 149342 141477 141667 2 70,18, 0,175, 141477,141649, 39 1 0 0 0 0 0 0 + SGN-E299397 655 342 382 C10HBa0011E16.2 149342 40097 40137 1 40, 342, 40097, 384 25 0 0 1 9 1 8 + SGN-E301889 418 0 418 C10HBa0011E16.2 149342 118850 119267 2 28,381, 0,37, 118850,118886, 584 0 0 0 0 0 0 0 + SGN-E301777 584 0 584 C10HBa0011E16.2 149342 118843 119427 1 584, 0, 118843, 263 1 0 0 0 0 0 0 + SGN-E305950 264 0 264 C10HBa0011E16.2 149342 12264 12528 1 264, 0, 12264, 622 15 0 0 1 1 0 0 - SGN-E329455 638 0 638 C10HBa0011E16.2 149342 68924 69561 2 73,564, 0,74, 68924,68997, 679 15 0 0 1 10 0 0 - SGN-E332418 704 0 704 C10HBa0011E16.2 149342 69415 70109 2 682,12, 0,692, 69415,70097, 30 0 0 0 0 0 0 0 - SGN-E329888 584 112 142 C10HBa0011E16.2 149342 45121 45151 1 30, 442, 45121, 253 4 0 0 0 0 0 0 - SGN-E331613 517 0 257 C10HBa0011E16.2 149342 68309 68566 1 257, 260, 68309, 253 4 0 0 0 0 0 0 - SGN-E331671 592 0 257 C10HBa0011E16.2 149342 68309 68566 1 257, 335, 68309, 30 0 0 0 0 0 0 0 - SGN-E331338 442 88 118 C10HBa0011E16.2 149342 45121 45151 1 30, 324, 45121, 608 8 0 1 0 0 0 0 - SGN-E328478 617 0 617 C10HBa0011E16.2 149342 69082 69699 1 617, 0, 69082, 562 14 0 0 0 0 0 0 - SGN-E329032 592 16 592 C10HBa0011E16.2 149342 69521 70097 1 576, 0, 69521, 437 17 0 1 1 10 0 0 - SGN-E313435 465 0 465 C10HBa0011E16.2 149342 69699 70154 2 398,57, 0,408, 69699,70097, 568 16 0 0 1 3 0 0 - SGN-E313337 587 0 587 C10HBa0011E16.2 149342 68781 69365 2 68,516, 0,71, 68781,68849, 351 11 0 0 1 10 0 0 - SGN-E312971 372 0 372 C10HBa0011E16.2 149342 69752 70114 2 345,17, 0,355, 69752,70097, 649 12 0 2 0 0 0 0 - SGN-E315084 663 0 663 C10HBa0011E16.2 149342 68983 69646 1 663, 0, 68983, 236 0 0 0 0 0 2 325 + SGN-E314988 625 0 236 C10HBa0011E16.2 149342 148781 149342 3 82,30,124, 0,82,112, 148781,148978,149218, 33 0 0 0 0 0 0 0 - SGN-E338444 538 115 148 C10HBa0011E16.2 149342 45118 45151 1 33, 390, 45118, 32 0 0 0 0 0 0 0 - SGN-E335905 417 105 137 C10HBa0011E16.2 149342 357 389 1 32, 280, 357, 724 0 0 2 0 0 1 1 + SGN-E345237 726 0 726 C10HBa0011E16.2 149342 118835 119562 2 716,10, 0,716, 118835,119552, 32 0 0 0 0 0 0 0 - SGN-E343318 612 63 95 C10HBa0011E16.2 149342 357 389 1 32, 517, 357, 656 16 0 1 0 0 0 0 - SGN-E345673 673 0 673 C10HBa0011E16.2 149342 69414 70087 1 673, 0, 69414, 31 0 0 0 0 0 0 0 - SGN-E345775 653 89 120 C10HBa0011E16.2 149342 45120 45151 1 31, 533, 45120, 631 4 0 0 1 1 2 1200 - SGN-E346016 636 0 636 C10HBa0011E16.2 149342 689 2524 4 95,128,323,89, 0,96,224,547, 689,784,1358,2435, 581 0 0 1 0 0 0 0 - SGN-E347235 583 0 582 C10HBa0011E16.2 149342 117143 117725 1 582, 1, 117143, 31 0 0 0 0 0 0 0 + SGN-E348586 764 10 41 C10HBa0011E16.2 149342 45122 45153 1 31, 10, 45122, 734 0 0 0 0 0 1 404 - SGN-E339252 734 0 734 C10HBa0011E16.2 149342 8048 9186 2 175,559, 0,175, 8048,8627, 32 0 0 0 0 0 0 0 - SGN-E341802 688 134 166 C10HBa0011E16.2 149342 357 389 1 32, 522, 357, 30 0 0 0 0 0 0 0 - SGN-E349972 832 802 832 C10HBa0011E16.2 149342 45121 45151 1 30, 0, 45121, 226 0 0 0 0 0 0 0 + SGN-E351221 234 0 226 C10HBa0011E16.2 149342 119459 119685 1 226, 0, 119459, 617 0 0 0 1 1 2 1949 - SGN-E350707 622 0 618 C10HBa0011E16.2 149342 115109 117675 4 5,389,69,154, 4,10,399,468, 115109,115114,115610,117521, 579 14 0 0 0 0 4 1135 - SGN-E362591 593 0 593 C10HBa0011E16.2 149342 43147 44875 5 24,199,176,113,81, 0,24,223,399,512, 43147,43510,44290,44680,44794, 603 5 0 0 1 2 1 1 + SGN-E693117 627 0 610 C10HBa0011E16.2 149342 119138 119747 2 540,68, 0,542, 119138,119679,