psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 135 5 0 0 2 4 1 4 - SGN-U313047 710 431 575 C11HBa0027B05.1 168521 68217 68361 3 17,76,47, 135,153,232, 68217,68234,68314, 704 3 0 0 1 1 2 738 - SGN-U313658 934 20 728 C11HBa0027B05.1 168521 113658 115103 4 504,25,164,14, 206,710,735,900, 113658,114707,114925,115089, 128 3 0 0 0 0 0 0 - SGN-U313658 934 597 728 C11HBa0027B05.1 168521 113266 113397 1 131, 206, 113266, 56 0 0 0 2 38 4 4310 + SGN-U313734 805 445 539 C11HBa0027B05.1 168521 42506 46872 5 6,23,5,4,18, 445,451,511,517,521, 42506,42519,46842,46849,46854, 30 0 0 0 0 0 0 0 - SGN-U315060 777 508 538 C11HBa0027B05.1 168521 43533 43563 1 30, 239, 43533, 887 2 0 0 2 3 3 963 - SGN-U318873 892 0 892 C11HBa0027B05.1 168521 85712 87564 5 32,4,10,727,116, 0,32,38,49,776, 85712,85745,85750,85760,87448, 1749 0 0 0 0 0 12 4368 - SGN-U319308 1763 0 1749 C11HBa0027B05.1 168521 88103 94220 13 409,76,104,69,115,47,69,72,77,74,141,366,130, 14,423,499,603,672,787,834,903,975,1052,1126,1267,1633, 88103,88619,89340,89557,89708,89936,90137,90969,91115,91434,92218,92556,94090, 31 1 0 0 0 0 0 0 + SGN-U319540 1535 119 151 C11HBa0027B05.1 168521 43532 43564 1 32, 119, 43532, 1410 0 0 1 0 0 6 3955 - SGN-U319786 1434 0 1411 C11HBa0027B05.1 168521 60271 65637 7 513,51,185,69,147,251,195, 23,536,587,772,841,988,1239, 60271,60980,61222,62668,62822,64374,65442, 35 0 0 0 0 0 0 0 - SGN-U320306 879 106 141 C11HBa0027B05.1 168521 43526 43561 1 35, 738, 43526, 869 0 0 0 1 4 4 4547 - SGN-U320445 888 0 873 C11HBa0027B05.1 168521 66752 72168 5 616,141,61,41,10, 15,631,772,833,878, 66752,68428,70095,72112,72158, 916 5 0 0 2 3 2 2 - SGN-U320905 928 4 928 C11HBa0027B05.1 168521 102573 103496 4 73,4,777,67, 0,73,79,857, 102573,102647,102652,103429, 821 12 0 0 0 0 2 7 - SGN-U320906 868 0 833 C11HBa0027B05.1 168521 102195 103035 3 656,5,172, 35,691,696, 102195,102852,102863, 42 3 0 0 0 0 0 0 + SGN-U321086 1218 808 853 C11HBa0027B05.1 168521 74888 74933 1 45, 808, 74888, 1951 5 0 0 0 0 11 3182 - SGN-U321466 2304 341 2297 C11HBa0027B05.1 168521 119899 125037 12 4,213,460,135,80,130,133,122,138,189,138,214, 7,11,224,684,819,899,1029,1162,1284,1422,1611,1749, 119899,119904,120118,121064,121290,121484,121719,121936,122164,123842,124590,124823, 1591 2 0 0 0 0 5 5332 + SGN-U322068 1622 0 1593 C11HBa0027B05.1 168521 52364 59289 6 219,434,59,129,136,616, 0,219,653,712,841,977, 52364,53531,55495,55687,57763,58673, 40 1 0 0 0 0 2 349 + SGN-U322381 759 718 759 C11HBa0027B05.1 168521 86568 86958 3 9,17,15, 718,727,744, 86568,86578,86943, 1360 8 0 0 1 1 5 3810 - SGN-U322890 1377 0 1369 C11HBa0027B05.1 168521 105176 110354 7 207,289,188,197,262,95,130, 8,216,505,693,890,1152,1247, 105176,105383,106333,106718,107027,109897,110224, 36 0 0 0 0 0 0 0 - SGN-U324134 1140 373 409 C11HBa0027B05.1 168521 43528 43564 1 36, 731, 43528, 31 1 0 0 0 0 0 0 - SGN-U324451 706 370 402 C11HBa0027B05.1 168521 45221 45253 1 32, 304, 45221, 35 1 0 0 0 0 0 0 + SGN-U325619 736 625 661 C11HBa0027B05.1 168521 38615 38651 1 36, 625, 38615, 33 1 0 0 0 0 0 0 - SGN-U325619 736 627 661 C11HBa0027B05.1 168521 110603 110637 1 34, 75, 110603, 57 3 0 0 0 0 0 0 + SGN-U327372 1597 11 71 C11HBa0027B05.1 168521 124284 124344 1 60, 11, 124284, 1279 0 0 0 1 1 2 818 - SGN-U327908 1280 0 1280 C11HBa0027B05.1 168521 13640 15737 4 924,222,54,79, 0,924,1147,1201, 13640,14957,15179,15658, 823 3 0 0 0 0 5 2880 + SGN-U331377 826 0 826 C11HBa0027B05.1 168521 76593 80299 6 173,93,93,102,50,315, 0,173,266,359,461,511, 76593,76863,77355,77531,79233,79984, 31 0 0 0 0 0 0 0 - SGN-U332133 650 10 41 C11HBa0027B05.1 168521 62667 62698 1 31, 609, 62667, 506 0 0 0 0 0 0 0 + SGN-U332919 517 0 506 C11HBa0027B05.1 168521 37997 38503 1 506, 0, 37997, 33 0 0 0 0 0 0 0 - SGN-U333166 664 501 534 C11HBa0027B05.1 168521 43531 43564 1 33, 130, 43531, 137 5 0 0 2 4 1 4 - SGN-U334089 742 368 514 C11HBa0027B05.1 168521 68215 68361 3 19,76,47, 228,248,327, 68215,68234,68314, 490 7 0 0 5 18 6 754 - SGN-U334522 515 0 515 C11HBa0027B05.1 168521 113838 115089 10 48,39,7,12,25,9,7,161,25,164, 0,50,90,97,110,135,157,165,326,351, 113838,113887,113926,113934,113946,113975,113994,114001,114707,114925, 405 0 0 0 0 0 1 545 - SGN-U334523 405 0 405 C11HBa0027B05.1 168521 114087 115037 2 75,330, 0,75, 114087,114707, 391 23 0 0 0 0 0 0 - SGN-U334524 424 0 414 C11HBa0027B05.1 168521 113660 114074 1 414, 10, 113660, 48 4 0 0 0 0 1 1 + SGN-U336313 860 9 61 C11HBa0027B05.1 168521 43420 43473 2 7,45, 9,16, 43420,43428, 850 1 0 0 0 0 0 0 - SGN-U336918 858 7 858 C11HBa0027B05.1 168521 62789 63640 1 851, 0, 62789, 209 14 0 0 1 3 2 2 - SGN-U336918 858 13 239 C11HBa0027B05.1 168521 63973 64198 4 48,8,160,7, 619,667,675,838, 63973,64022,64031,64191, 499 6 0 0 1 28 3 2979 - SGN-U337724 534 1 534 C11HBa0027B05.1 168521 106832 110316 4 74,244,95,92, 0,102,346,441, 106832,107045,109897,110224, 66 2 0 0 1 16 4 104 + SGN-U340224 819 663 747 C11HBa0027B05.1 168521 111500 111672 5 22,8,5,24,9, 663,701,709,714,738, 111500,111526,111540,111573,111663, 192 1 0 0 0 0 0 0 - SGN-U340488 193 0 193 C11HBa0027B05.1 168521 22569 22762 1 193, 0, 22569, 453 24 0 0 0 0 3 2145 + SGN-U341139 477 0 477 C11HBa0027B05.1 168521 73957 76579 4 140,75,125,137, 0,140,215,340, 73957,75911,76126,76442, 45 1 0 0 1 30 0 0 + SGN-U341178 384 227 303 C11HBa0027B05.1 168521 111655 111701 2 34,12, 227,291, 111655,111689, 31 0 0 0 0 0 0 0 - SGN-U341394 513 481 512 C11HBa0027B05.1 168521 43533 43564 1 31, 1, 43533, 39 0 0 0 1 6 2 5 - SGN-U341413 606 28 73 C11HBa0027B05.1 168521 42498 42542 3 8,5,26, 533,541,552, 42498,42507,42516, 532 0 0 0 0 0 1 4432 - SGN-U341457 532 0 532 C11HBa0027B05.1 168521 8421 13385 2 122,410, 0,122, 8421,12975, 635 2 0 0 0 0 0 0 - SGN-U342353 637 0 637 C11HBa0027B05.1 168521 70332 70969 1 637, 0, 70332, 72 3 0 0 1 1 1 2 - SGN-U343039 735 489 565 C11HBa0027B05.1 168521 124341 124418 2 60,15, 170,231, 124341,124403, 35 0 0 0 0 0 0 0 - SGN-U344400 536 490 525 C11HBa0027B05.1 168521 43527 43562 1 35, 11, 43527, 31 0 0 0 0 0 0 0 + SGN-U346883 758 263 294 C11HBa0027B05.1 168521 43527 43558 1 31, 263, 43527, 631 2 0 0 0 0 1 195 + SGN-U347024 656 5 638 C11HBa0027B05.1 168521 83366 84194 2 76,557, 5,81, 83366,83637,