Files and directories:

assembly_metadata.yml
  Contains various metadata, notes, and statistics about this
  assembly.

membership.tab
  Tab-separated file showing the membership of preclusters, contigs,
  and reads.

phrap_consensus_all.fasta
  All consensus sequences (generated by Phrap) for assembled
  sequences.

phrap_consensus_<tag>.fasta
  Phrap consensus sequences and single BAC sequences for each chromosome

precluster_assemblies/
  Contains full phrap assembly results for each assembled precluster.

generated_agp/
  AGP files generated from the Phrap assemblies for each chromosome.

