<?xml version="1.0"?>
<!-- GAME-XML generated by Bio::SeqIO::game::gameWriter -->
<!-- Questions: mckays@cshl.edu -->
<game version="1.2">
  <seq id="C02HBa0125L12.1" length="12162" type="dna" focus="true">
    <name>C02HBa0125L12.1</name>
    <residues>
      AGTGGAAAATAAAAAGAGATCAAGATTTCGTATTCGAATTCTAAAAATAAAAAAATTTCA
      AATTAGGAAGTTTTTTTTTCCAAGTAGGTATTGATATAATCTTGAGTTAATCGTCTTAGT
      AGTAGGATTCGGCCATCAAATTATTTTTAAAACATTGAGAACCATTTTTAATATTACTCC
      CTAACTTTGAAATCCCTACTTTTCTAAAGTTTTCTACTCTTGGACAGATAAATTTTAAAT
      TTGATCAAATTTGAAAACTAGATTGAATTTTATAGTATCATTTTTCCATAATAACAAAAA
      AAAAACTTTTAGCACCAATAAATATTAATATTAATAAAGAGTGTTAAAATCTTTATCTAA
      ATGAATAAGAATTAGTGTTTTATTATTATAAATAAAAATATTACACCTAATTACTCCAAC
      TGACCAAAAGAGTCCAATGTCTCATGCACAAGTCAATTTTAGGAAGCTGCTCTCCTAACA
      AACACCTACCACAAAATTTAGCAAGAAAAAATAACTAAGATGTGAAAAATATACTCCATT
      TTAACCATTTTTACACTTCATGTGAAGAAGCAATTTATCTTGTTCTCATTTATATAACTA
      TATTTTCAAATCTACAATTTTTTTTTAAAAAAAAATTTATTTATAACTACAACTTTCTGA
      ATTCCAACACCTTCAACAATATTAATATAATCTAGGTACCATATATACATATGACCAATT
      ATATATTTCAAAGACCCTTTTTAAAAAAAGTCAAAGTTCCAACATTTCATAGATAGGCTT
      ATGCTCTAGCTTATCAAAGAGAGGAAGTGAAAAGAGGGTTGCTCCTCAATCCTCATCATA
      CTTTTGAGCATACAAAAAATCGAAGATGTAACGGTTAGGGTATATATGAGTCACTCTTAA
      ATTACTTACCATGTGGTGTTTGATACACACCCACAATTGTCCAACTAAATTAGAATTCAC
      ACCGATTAGCCAATTTCATATTTGCGTTTCCTTGATTGCATACTAAAAGTTTGAACCAAA
      GACTCCATCATAATTCTTATAGATTAAAAAAACATCACATTGTTTGCAAATATCCATGAA
      TTTGACTAAAGATGATTGGTTAGAAACAGTCTGGTGCCAGCAAACAACAAGGACAATTAC
      AAGAAAAAGACGCAGAAAACAATAACTCCAGCTGCAAAGGATATGCCAGTTACAAAAACA
      GGTGATATATGGCAACTGTTTTTACAGCCAATTTAATTTTATTACTAGTTCAACTATACG
      TTATAGTAATAACTTAATGTACTCACCCATATGCATGTCAGTAAAATATATCACTATATA
      ACTTCTAAGTTCTATGTATCTGATTAATAAAGAAAGTTCAAAAGTTTAAAATAATAAGAA
      GCTTTTAGTGTGAGTTATGAGATATAATATATAATTTCAAGATGAAATATAGGAATATTT
      TATCTCACTTTTAATTTGAGGTATTAGACATTCTATCATTTTTATCATAGTGATTAAATA
      CGTTATCTCATATACATTATGAAATAACTTATCGCGATTAATTATTTCCGAATAACTTGT
      TTCTGACCAAAAACGGTAGTTCCCACTTAAATATTATTCTAAAGGAATTGTCGATTGGAT
      GAACGTGGACAGCTCAAGCTATTAAATACTAATTTACTCGCTAAGTAGTTGGATTATATT
      AATTCTTTCTATTAAAAAAATAAAAACACTCATGTGTTATGTACTGTTATAGCGTAAAAA
      AAAGGGGGTGGGGGGAATAGTTACATTTTGTTTCTCAAAGAATAAAGATAAAAATAATGT
      AAATTGAAATTAAATTCACTTTTACATTTAACTTATGCATAAATTTATTATCAATATATA
      TATTATTTAAAGGACAACTAAATTAAGGTATTTGAAAAAAAAAATAACAAAATCGCTCTA
      TGACGTACTTTGACCACATTTACCAAGATGAATAGAAATAATTAGTCGACATATATATTT
      CTTTTGTTTCAGTATATATTATAATTCAAAACTTGAAGGACATATATATATCGTTAAAGA
      AAGTTTCACTAGTGATAATAATGTTATGGGGGATAAATTGAAGCCTTTTGCCTTTTGGTA
      TTGTAGTTGTAGAAGTTTGTTTAAAACAAAATTGGATTTGGTATAGTATCATATCATATA
      TATATATATATATATTATGATAAGATGCCAATGGATGATTTGGAGTATGCCAAAGAATGT
      GCAAAATATGAAAGAGTTATTTTCCCAATAGAAAATTACAAGTACATCCTAAAGTACATT
      AGGCATATCCTCATCCTCTTTTGGAGTTTTGGTTTTAGACCAAACCTACCCACCATTAAG
      AGGCATCTTGCCTGCACATGCTACACTCAATCTTATACCTAATAATAATAACACCAATAA
      ATAATAGTGTGATGTAATAATAATGAAAATGTTTTTTAGTTGAATAATAATTTTAACTTG
      TTTGGACTTTTTTTTTGTTAATATTTTAGTCATTTGAGATTTATTGACCTATTAAATTTA
      AATTTGCATGAAATATCATATCGACTTAAAAGATGAAATATATTTTATCAGAAATCTTCT
      TTTTTATTGATTTTAAAAGTCGACTTTTGAATTAAAGCTAGAGTGGTTTTCACAATTAAT
      TTTGATCAAACAAGGTTATTATTTAACAAATTTTATCAAGTGAAACATTTAATCCTAGCA
      AGTTAAATTAAAGACATAATTATTTGGGTGAAGTGTTACCACAAGAAAATTGTTTGAAGG
      TTATCTGATCGGAGATTTTGAGTTTGAAGATTCATTTGATATTTGAAATTTATTGAACTG
      TCTAATTTAAATTCACTTTGAATATCAAATCGACTTAAAAAGATGAAACATATTCATTAT
      ATTCAATGAGAGAGTTATTTTTTTTTTTTGCTGATTTTAAAAGTCAAATTTTAGTTAAAG
      CCAGAGGGATTTCCACAGTTTCACCGTCCCTAAATATTTATATTGGTGGATGTACATTAA
      TTTTGATCAACCAAGGTTATTATTTAACAAAATTTATAAAGTGAAACATTTTAAACCTAG
      CAAGTTAAATTAAAGACATAATTATTTGGTGAAGTGTTGCCACAAGAAAATTGTTTGAAG
      TTTGCCTCTAATCGGAGGCTTGAGTTTGAAGATTCATTTCATAGCGAGAGATGTCTTGAT
      TGTTAATATCGAAGTTGAGGAATTATTTCACCATGCAATAACAAAAGTAAATTTTGGCAC
      AATTCAAAGAGGAAGAATTCTACTCAATCTTAATTGATAAAATTTTTCGATATTTATATT
      GATAAAAAATAATAAATATGTGATAAAAAATAAGTTGATCACCACTTCCATTAAAAGGTG
      ATAAAACAATGGTTTTCCATTGTTGAACCTAAATAAGCAAAGAAAAAGGAGTTAATAGAA
      TAAAAATTAATCACATGGCAAGTTGAAACAATTCTATGCCAAAGCAAAATGAAGATTTTT
      TATTTTTTATTTATAAAAAGGGAAAGAAAGATAAAGCAACAACACCAATTTAATAAAAAT
      AGGCACATGCTAAAGTCATTTGGCATTTAAAGAATATTCCAACGAATTTAAAGGAAAATA
      AATAAAAACAATGTGTACCAAGATCTAAACTATAATCTTTGCATTAATTACGCTAACGGG
      ATTATCCAGCTTCGCCTACCTCATTTAAATAAAACACATGCTAAAAACATTTTATGTCAC
      TATTTGCCTTTTTTTTTTTTAATGGTACGAACATTCGATATTTATATTAAAAAATTTAAA
      CTTATATTGCGTAAAGTTTATTCAAAAAATATTATTACTTATTAACATAATTGTTTTTAA
      TTAATAATATAAGAATATACTCATTCAGTAACGTAATCATATATAGTTCACGATGATAAG
      TTAGACATCATTTATAAAAAAATATTAGACACAATTTGTCAAAAAATAATACCATATACA
      TAAAACTTATACAAAATATAATTATTTTTTTCATAGTAAACTTTGCAAATAATCTTTTGA
      TTTCTTCAGATAAGTCATTTCGTCATAATCCCAAAAGGTCATGACATTATTTGCCATTGT
      ACAAAAAATACCTAAAATAAAATTAGGGATTGAATTTTGTATGTATAGTTTTTTTGAATG
      AGTAATAAATAAATAATTATATTTTAAGGGAACTTGTTATATATTTGAGGAGACAAATTT
      GACCAAAACACTAACCAATTTTTCTTCGTTGAAAAAATAGGAGAAAAGAGGTGGAATTTT
      TATTAATTTACGTAACAAAAAGGAGAAAAAGGAAAGACAAAGTTTGACGAAAAATGACGG
      AGCCCACTAAGTTTATTAAATAATAATTATTATATTATACATAAAATATAGGGATTGTTC
      CACAAATAAAGAGAGTTTTGTCTCCACAACTCAAACCACCATAAATATTTGACAACTCAG
      AAAATGAGTCAAAAAAACTCTTATGACTTATCCACCCAACTCAACTATTTCTCTTTGAAT
      CACCTAATTCCCTATCTTACTTCTTTTATTCCCAAAATATCCTTTTGTCTTTTGCATTTT
      TAAAATTTTATTTCATAAAAAATAGAAACCTTTTTGGATTTTGATTGGCTCAAGAGGGGT
      GCTTGTCATTCCATTTAAATTGGTTTTTTAAATTATTTGTTTGAATTTCCATTACCATCT
      TCTTCTTTTTTGATTTTCCACCTTTTCTTTTTTTAGCCTGAGCTCCAACTAAATTTGAAT
      CACACATTGTAGGAGTTCACCCATTTCATCTATCACTATGTGGACAATTTTGATTTTGGG
      GGTCCAACATCGGGTGATATGGACTCTTCTCTGATACCATGTGAAATCAGGTCTTAGGCG
      TAACTTACACCCCAAAAGCTAGATCAAAGGGAGGAGGATTGCTCAAACCTTATAAGGAGT
      CCATCCATCTCATCAACCACCGATGTGGGACTTTTGTTAATCTTTAACATGATCAGCGGT
      TCATCCGAACCTCTCTCGGGGTTAGACACAATTAAAATAATATTTTTAGGTATATAATAG
      ATGTTGAAATTACATTATGTCTCTATTTTTATAGATTTTGAATCCCTTATTTAAAATTTT
      AGCTTTACCCTTATTTGCCAACATAATTTTCTTTATATTTAAAATTCAAATTCAATACCT
      TTTGTTACGAAGGGATAAGAGAAAAACATTTTTTCTGAGAAAGGGCAAAATAGAAATTAA
      TACGCCCACCACCTCACCAAACTCCCTGACCTCAAACAAAAATTGCCGGCAACGTGTAGC
      CAAGTCGACATGCTGACGTCACCCATGACGCGTCTCCTATGCCAGGTCATCTCTCAAGCC
      TTATCCGCTAATCTACACCCTGGAAACGCCACGTGGAATAAACCCCTGGCCCCACCTTAA
      TCCTTTAAATTTCATATTCCTATGCTTCTCATCCCCACACTAAATCATCACCTCTCTCCA
      TTCATATTCAGCCACGTGTCACATCCTTACTCTAAACACAGCAAATAAACATTTCCTTTA
      AATTAACTTCCGATAACATATATATAAATAAAACACTCAAAATATATATTCATAAGATAC
      ACACGTTCTATGTGATATACGCTCACAAGACCATTGTATAATATAAGGGAAAAAAATTTA
      GCGCGTGACATAAAAGACAACTAAGCCTGCCATTTGTCCTGGCAAAGAGGAAAATAAAAA
      TAAATAAATTCCAGTTGGCATAAGTACGCGTCTGCTGGCCGACCTTATCCTCTTTTTATT
      TTTTTCCCCATATTTTGGTTTATAGTTTATAGTTTTTAATGAAATGAAAAGTTAATGAAC
      ATTGATAGAAAGAGTATGAATAAGATATATATACATATAACATATATAGAGAGAGAAACA
      AAGAGTAAGAGAGACTAAACCCTAGATTTCATTCTGACTGAAAGCAGAGTATTTTGTATT
      TTGACCAACAAAGAGCTGTGTTTACATCTAATTTTTTTTCCGTCATTATTCATAAAGGTA
      AGTGATTAAAGTTTTTATTTTTTGAACACTTTATTAGTGTTAATGTTGTTTTATGTAATA
      AATGTTATGTGAAAAGAATAAAAAAATTGCTAATGGAGTTGTTTATATGTATGGTGATTA
      TTAGGTGTAGGTTGGATTTGATCTTGTTTTTTTTTTTTAAAGATTGAAGTTTTTAACTAT
      ATTTTGTGAATGGGTTTCTGTTTTATTGATTGGATCATGTTTTTTGTTACTCTTTTGCTT
      GAAGTTTAATGAGTTAATTTTGATTCTTGGATTATACTCATTTTTTCAGATCTTTTTGAA
      ATGTACTCAGTTTGATAAACAAGAAGAGGCTATTGGGTTTTGGTTGGTGGGTGTGATTCA
      GTCTGAGGAAGTTGTTTTGTGATGTATGTGGATTGAGTTTTTTGAAGAGAAAAAAAGTTT
      CTGTTTGGTCTGTTTTCTAATTTGAGGATCTGCTGAAGGAGTAGTAGTTACACTTGCAAA
      ATAGAATGCCACTATCTCAGAATGGAACTACAGCATAAAGCTACAGAAATGATGGGGTCT
      TCCATTTAAATGTTTTCTCGAGCGATGGAACATTTTTTTGTGATAGCACTTCAATATGTC
      ACTGCAAGACAAGGGAAAATGCTTCCCTTTCTTGTACCGTTCTCTCACTGTCTACTCACG
      TTTATCATCTCTAGTTTTGTTTCTCTGGCATTTCATATTATAATACTTTGAGCTGAAAGA
      GATCTAACAATTAGTTCTTAAATTATGTATATGCGGCATGTGTTCCTATCTAGTTGAATA
      ATGTCGCGTGATGATATTTACAATTTGATTTCAATTAGTTATGATTGATTGGGTATTGTT
      ACTGAGATGCTGGTTCTATGCGATTCCAGGGCCTACCGTGCATTTTACATCTTAAACTGG
      ATTTACCGCTATCTGACAGAGCAGCGTTTCACTAGATGGATTTGTAAGTTTTTGGAAGTA
      CAACCAGTACTGTTTGTTTGCAATTACTTGCAATGGTTCTTTAAAGTTGAATTTCCCTTT
      GCTTTTCTCTTCTTATTGTAGCTTGCGTCTCTGGCCTTGTCCAGACAGCCCTTTATGCAG
      ATTTCTTTTATTATTACTTCATCAGGTAACAATTTGTTAAAACTTCCTGAAGTGGCTCCT
      CTCTGGATGACGTAAACAAACTACTAACAAATTTGTTTTGCAGCTGGAAAAATAATGCTA
      AGCTTCAACTGCCAGCCTGAGGCGATGAAGATATATGATGAACAGTTTTAACACCTAACC
      GTAATCTGGTTTCATGCCGTGGCTTGTGACATGATTTTGGGATACTACTTTTTTTTGGAT
      GTGAGATCATACATGGAGTTTGGCCGAGGGTCAAGTATTTCAATGAGCTCCTCTTACATT
      GTTAGATTCAGATAAAGTACCCTTGTTAATATGTCAGAAATATGTTTAATTTGAAAATGT
      TGTCTGCATTCCTGTCAAATGTGATTCAAACTTTCAAAGATATAGCGGTATGACTAATCA
      ATTATTTTGCGTCGTTCATATAAAGGTGTTCTCAGATGTCTGCTATCTTCTTCCTTTTCG
      AGGCGCCTTTGTCTTTCGTTCTTAACAAATGCTGATTAATTTTAATATCCAATTGCGCGT
      TCTGGTACATTGTTGCTAGTGTCTTTGACACTAATGCATCACTCAATTTGGTTTGAAAAT
      TGTAAGTCATAATAAGCAATGAAGGATAAGGAAAGTAAATCTTCAAAATCAAACGAACAA
      TTTAAGAACTTCAGAACACAGGAGCTCTTTGGTGACCTTGTTGTACTAAACCTCATCTTT
      ATTTAAAATCAATCATAATGGGTCGAACTAAAGCTTTAGTTCAGTCACATATAGAAAACT
      TACTGTTTCAATAATTATCATCGCGATAATATCTAAAACATGAAAGGAAAGATGACACAC
      CTGCACTCTATATCTTTAGTTAAATCACAGTATTACAGTACAAGAACAACAAATGAGAAT
      GGGAATCTCTTTTTTTTTTCCTTTCTCAGAGAGGAGCCGGCAACCAGTCGAGCATTTCAC
      CAGCAAACATGGGAATTATATCTCCTGATGCATATGAAAAGGATTCGGGTACCTTCCATG
      GTGTCTTACTCAACTTAATCTTTGAGTTGTTCCTCGGAAGCCCATAAAAGTCTGGTCCAT
      TGAAGCTGGTAAATGCTTCGAGCTTGTCAAGTGCATTTTCCTAAAATGCAGACAACCAAA
      TCTAAGTCATTGACTTGTAGCGATAGCTGCTAAAACTAATGAACCTTTCCCAAGTAATTA
      GAAACATTATAACATGGATGAGTTCAACATGAGAAGCGCTGTAGATATCTATTGCAATTA
      CCTTTTCAAACACCTTTGCATATACTGATAAGGCTACAGGAGCATTGTAAATACCAGCAC
      ATCCACAAGAACATTCTTTTCTTCGTCTATCATGAGGAGCACTATCAGTCCCAAGAAAAA
      ATCTTTTACTTCCACTTGTTACAGCTGACACAAGTGCCTCCCCTGTGTTATTCAAAGCAA
      TCTTGCTTAGATTAAAATTTATACCAAGTGAACAAGAGAAAAGAGAAAAGTAGTAGGAGT
      AAGGGGACAAGATTAGTGCAATAGATCTTGTAATTATGCGAATAATGAATATATTAATAA
      AGATGAGTTTTTTCTCACGCACTTGGTACTTTTCCAAGTCTCATTAAACATGCTCCCCAA
      ATTGGCAAATTCTTATAAGAAAAAAGAGCACCTTGTTTCAACAAGGACAATCATGCCATA
      CATTCATTTCCTTTTTTTAGCACATTCACAGCACCGTTTGCATCAAATTTTCAACAAGTT
      CACATGTCTAGGAAAATAAAAGGCAATGGATGGAACTAGCAAATCAAAGAAAGCCTGATC
      AAGTAGTGATTCGTGACACATTAGCATCAGTAAGACTAAAACTTTCATCTCTTACACAGA
      GGTAAAAGAAATCAGGTAAAGAAGAAACTTTCAACAAATTATTCTACACAAAAAGAGGGT
      CAATTACAGGCAAATATAGCTCTACAGTTTTTACCTAACTTTCAAAATTTCAGGGTAGTC
      ATAACTCTTACAAAGAGGTAAGAAAATATCAGGTAGAAGAACAAACTTTCAACAAATTAT
      TCCACACAAAAAGAGGGTCAATTACAGGCAAATATAGCTTCTACCCAACTTTCAAAATTC
      AGGGTAGATGGCTCAATAGCTGTTTAATTCATTTCTTCTTTGTTATGACAGTAATCCATA
      CAACAAAATCAAAATGCCATATTCCGAAAAGATTATAGGCTTTTAGATTTGATTTAACGA
      AATATAAGCAAAGGCAGATTAGTTTTCACAAATAGTGTTTTGGACTCACTTCCCACTTAC
      ACAATCTCTTTATTCCTTATTCCTACATATCTGGCCAAGAAATTGATAAGATTCGTCGAA
      TCTGAAATGAAAACAGGGACAAGAAAGCTTTTAATCATGCTAAGTGGGAAGCTGTCCAAA
      AAGATAAAAATCTGGAGGCCTGGGAGTACGGAATCTGAAAGCACACAATGATAGCCTCTT
      AAACAAATGGTCATGGAGATTCACAAAAGGTGAGAATGCAAAACGGAGTAAGTCATCGAG
      ACCAAATATGGTATGCAACACCTGTGGATAACAAAGCTTACTAGCTCTTGTATGGTTTCT
      CTGTCGGGAAAAGCATCTGGACTTTCTTTAGACGAATTCCTAGGAAACAACATCTTTCAA
      GTTGGGAAATGGCAGAAAATCAGCTTTTTGGAATGGCCGTACCCCTCTCAAGTGTGTATC
      CACTCTGGCAGCCAATCAGAATGCGTAACAGATTATTACTCAAAAATGGCTTGAACATCA
      TCTTTAGAAGGCATTGCAATGGTTGGGTAGTTAATAGAAACTGCAGTCTCTTTATCTTGG
      GACTTACTCCTTACGCACAGACAAGAAGGACAACATTTATTGGAGGAGCAAGAAAGATGT
      CTATTTACAGTTAAATCATGCAACACCATTCTGCTGAAAAGTTTGATTAAGAACTTATAT
      TAAAACAGTGCTCTCTCTTGAAAAATGTGCAATTTCTCTTTTGTTTCTTTCACTCCTTAT
      GAAGAAGAGAACTTTTTTTGTTTCAGGAGATGAGTCATTCGAGTTATATGATATTAGCAA
      CAATGAAGATAGATGGTTCACGATAGTAGAGTAAAGCAGTCAATCACTAGCAGACTCAAT
      ATTGATGAGGAGAATCTGCGAAAGGAATGCGAAATTCTTCAACAGGCTTCACACGGGGTA
      GGTAATTTGTGTAGAAGATGGGGTAGGAAGATTGAAGTGTATACTTAAAAAGTTGCAAAA
      TTTCAATGTTGAAGTCGTTCTGTGAGGATTGGCTGGGTGACAAAAAGTCTGCCATCATAA
      TCCCAGAGGATGGCAACATTTAAGTGTAATCTGATTCAAGCACTGTTCAGATGCTGAAAA
      TGCCTTCAGAGAATAAGTACATCAAAGTCCTTTTGGTGCTGTAAATTTAACTTTAAGCTC
      TTATCCCTTCAACTCTGTCACTCCACTCTCCTTGCTGAAAGCAGGTAAGGGGAAGTCACA
      GGTACAACTAATCAAGCAGAAGCTGAAGGGGATGAAATCAATCATGGAAAAAATGCTACG
      GTAAGATTACTACTGAGGAGAAATTAGAGTTGGAGAGTGCAATAAAAGGCTTGCTGGAGA
      AGGTAAGAACTGTAACATCAACAAACCCATCGGGATCCCTGCATACTAGAATGTAAAGCT
      TGTTGCTTCAACTTGATATTTTATTTTATTTTTGATGAAATAAATGGTGTATTGATAAAC
      AAAGCATCTAGCAGATGCATAATTACAAAAGTAGGAAGAGTCAGCTCCAAGAATGGACAA
      AAATAAACTTCCCAACAAAAAAGTAGAACTAAGCATCTGGCCTTGAACTCGATATGGTTT
      CCTTTTGTTGATAGAGTTAGTATATTGTCCAGCTTATGTTGATTAGGATACTGAATGTAA
      TTCTATTCAGGTTCATGTATGAAATAGAAGCATACAATGCTAGCAGTGTAGACTTAATTT
      GCTCAAGTTACCTATCACACTGGAAGGAATATAATTAACCTTGTTTGTTAAAATGCAAGT
      GTAAGTATGCAATTCCTCAACTTTTCAAAACCATCTAAGATTGGAAATAAGGAAATCAAC
      CTCTTCCACTTTACTTGAGTTGAACCAAACAAGTGGAGGTTAATGGTAAATACATTATGC
      ATGAGAAAAATGAAGTTCTTGTCCCCTTTGTAGAACCAAACAAGGTCTACATGCCCTTGT
      AGTCACTACAGGTGGTTAACCAAAGAATCCTAGTCGGTTTTTCAAAATTAAAAGTAATGT
      TACTTCATTATTGTTCTTGCAACCGATAGACAAACACCAAGCGATAGAAGAGAATCGGAG
      CATCAATATGAAAGGATAAAGAATATTACTGTGGATCTCTCTTTTGAGGACTGGAAGGCA
      GTAATTATGCGGTTGTAAGCCCCCTTGGAAGAGAGAATTCCTGTTTAAAACAAGATGTTG
      TGGGGTGACAGTCGCTGCAACAAATCCTTTAAAGAATGATAGAAAGGTTAAATTAGCATT
      TGAAAAAGGAAGGTCAATGAAGTTCTTTCATCTGACAAGAAGACTTTAAGTTCAAAAAGG
      TGGATAAAGTTGAAAAGATTACCTTCACTGCAAGATTCAACAAACTTAACAGCATCCATG
      GTGGTGACATGCTCCATCACGACCTTCAATCGTGGAAATTTCTGCACCAAAGGTCTTAGA
      ACCGTTTCAATGAATACCTTTTCTCTATCAAACATGTCAACCTCAGGATTAGTAACCTCT
      CCATGAACCTGCAGTCAAATGTAATACATAAAAATCCTATAAAATGAAATTTTTTCAAGG
      GAAGTGACAAAAATCACAAGCTTTGACAGAGCAATTGGGGGAAGAAAAAACATGATTAAA
      GTTGAGTCATTACAGTTAAACGCTGAATCTATTTTATAGCAATCCAAGATAAACTGAAAC
      TAGAAAAGCTATAGCGTAGGCAAGAAATAACATTAATCATGTATAGCTTCAACAGATACA
      AGGTACAACTTTGAATCTGCATCTTTCTACAGTGATAAAAAGCAATTTTTTGGTGGTAAG
      GTTAGCATGCACATTATGCAATGTTCTAGTGGAACAGGAAGA
    </residues>
  </seq>
  <computational_analysis>
    <program>GenomeThreader_SGN_E_tomato_potato</program>
    <database>SGN Combined Tomato and Potato ESTs</database>
    <result_set>
      <name>match_1</name>
      <result_span>
        <type>match_part</type>
        <score>0.997</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>9202</start>
            <end>9843</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>
  <computational_analysis>
    <program>GenomeThreader_SGN_E_tomato_potato</program>
    <database>SGN Combined Tomato and Potato ESTs</database>
    <result_set>
      <name>match_2</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11509</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.991</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7777</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_3</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11492</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.993</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7777</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_4</name>
      <result_span>
        <type>match_part</type>
        <score>0.964</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11802</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.983</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.969</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.840</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7864</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_5</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.981</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7942</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_6</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11827</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>8159</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <annotation id="gene_1">
    <name>gene_1</name>
    <type>gene</type>
    <feature_set id="gene_1">
      <name>GT_PGL_1_AGS_1</name>
      <type>transcript</type>
      <property>
        <type>source</type>
        <value>GenomeThreader</value>
      </property>
      <property>
        <type>seq_id</type>
        <value>C02HBa0125L12.1</value>
      </property>
      <property>
        <type>type</type>
        <value>gene</value>
      </property>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7777</end>
          </span>
        </seq_relationship>
      </feature_span>
    </feature_set>
  </annotation>
  <annotation id="gene_2">
    <name>gene_2</name>
    <type>gene</type>
    <feature_set id="gene_2">
      <name>GT_PGL_2_AGS_1</name>
      <type>transcript</type>
      <property>
        <type>source</type>
        <value>GenomeThreader</value>
      </property>
      <property>
        <type>seq_id</type>
        <value>C02HBa0125L12.1</value>
      </property>
      <property>
        <type>type</type>
        <value>gene</value>
      </property>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>9202</start>
            <end>9843</end>
          </span>
        </seq_relationship>
      </feature_span>
    </feature_set>
  </annotation>

  
  <computational_analysis>
    <program>RepeatMasker</program>
    <database>tomato repeats master</database>
  </computational_analysis>
  <computational_analysis>
    <program>RepeatMasker</program>
    <database>tomato repeats master</database>
    <result_set>
      <name>Copia00143 1 45 -1</name>
      <result_span>
        <name>Copia00143 1 45 -1</name>
        <type>nucleotide_motif</type>
        <score>240</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>4839</start>
            <end>4796</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>Copia00143 77 217 -1</name>
      <result_span>
        <name>Copia00143 77 217 -1</name>
        <type>nucleotide_motif</type>
        <score>1025</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>4969</start>
            <end>4829</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  

  

  
  <computational_analysis>
    <program>BLAST_tomato_bacs</program>
    <database>Tomato BAC sequences</database>
  </computational_analysis>
  <computational_analysis>
    <program>BLAST_tomato_bacs</program>
    <database>Tomato BAC sequences</database>
    <result_set>
      <name>match_1</name>
      <result_span>
        <type>match</type>
        <score>1957</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>665</start>
            <end>1693</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_2</name>
      <result_span>
        <type>match</type>
        <score>5321</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>9458</start>
            <end>12162</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_3</name>
      <result_span>
        <type>match</type>
        <score>5769</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>6461</start>
            <end>9466</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  

  
  <computational_analysis>
    <program>BLAST_tomato_bac_ends</program>
    <database>Tomato Combined Clone-end Sequences (BACs and Fosmids)</database>
    <result_set>
      <name>clone_1</name>
      <result_span>
        <type>clone</type>
        <score>1045.5</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>80</start>
            <end>12134</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>clone_start_1</name>
      <result_span>
        <type>clone_start</type>
        <score>1007</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>80</start>
            <end>617</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>clone_start_2</name>
      <result_span>
        <type>clone_start</type>
        <score>1445</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>702</start>
            <end>1472</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>
  <computational_analysis>
    <program>BLAST_tomato_bac_ends</program>
    <database>Tomato Combined Clone-end Sequences (BACs and Fosmids)</database>
    <result_set>
      <name>clone_end_1</name>
      <result_span>
        <type>clone_end</type>
        <score>1084</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12134</start>
            <end>11584</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <computational_analysis>
    <program>GenomeThreader_SGN_E_tomato</program>
    <database>SGN Tomato ESTs</database>
    <result_set>
      <name>match_1</name>
      <result_span>
        <type>match_part</type>
        <score>0.997</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>9202</start>
            <end>9843</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>
  <computational_analysis>
    <program>GenomeThreader_SGN_E_tomato</program>
    <database>SGN Tomato ESTs</database>
    <result_set>
      <name>match_2</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11509</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.991</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7777</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_3</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11492</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.993</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7777</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_4</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>0.981</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7942</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_5</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11827</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>8159</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <annotation id="gene_1">
    <name>gene_1</name>
    <type>gene</type>
    <feature_set id="gene_1">
      <name>GT_PGL_1_AGS_1</name>
      <type>transcript</type>
      <property>
        <type>source</type>
        <value>GenomeThreader</value>
      </property>
      <property>
        <type>seq_id</type>
        <value>C02HBa0125L12.1</value>
      </property>
      <property>
        <type>type</type>
        <value>gene</value>
      </property>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>7777</end>
          </span>
        </seq_relationship>
      </feature_span>
    </feature_set>
  </annotation>
  <annotation id="gene_2">
    <name>gene_2</name>
    <type>gene</type>
    <feature_set id="gene_2">
      <name>GT_PGL_2_AGS_1</name>
      <type>transcript</type>
      <property>
        <type>source</type>
        <value>GenomeThreader</value>
      </property>
      <property>
        <type>seq_id</type>
        <value>C02HBa0125L12.1</value>
      </property>
      <property>
        <type>type</type>
        <value>gene</value>
      </property>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>9202</start>
            <end>9843</end>
          </span>
        </seq_relationship>
      </feature_span>
    </feature_set>
  </annotation>

  
  <computational_analysis>
    <program>AUGUSTUS_tom_cdna</program>
    <database>de novo</database>
  </computational_analysis>
  <computational_analysis>
    <program>AUGUSTUS_tom_cdna</program>
    <database>de novo</database>
    <result_set>
      <name>gene_1</name>
      <result_span>
        <type>gene</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>transcript_1</name>
      <result_span>
        <type>transcript</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>stop_codon_1</name>
      <result_span>
        <type>stop_codon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8008</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_1</name>
      <result_span>
        <type>intron</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8341</start>
            <end>8201</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_2</name>
      <result_span>
        <type>intron</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11429</start>
            <end>8503</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_3</name>
      <result_span>
        <type>intron</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11662</start>
            <end>11547</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_4</name>
      <result_span>
        <type>intron</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11994</start>
            <end>11829</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_1</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_2</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_3</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_4</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
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      </result_span>
    </result_set>
    <result_set>
      <name>CDS_5</name>
      <result_span>
        <type>CDS</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>11995</end>
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    </result_set>
    <result_set>
      <name>start_codon_1</name>
      <result_span>
        <type>start_codon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>12031</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  

  
  <computational_analysis>
    <program>AUGUSTUS_ab_initio</program>
    <database>de novo</database>
  </computational_analysis>
  <computational_analysis>
    <program>AUGUSTUS_ab_initio</program>
    <database>de novo</database>
    <result_set>
      <name>gene_1</name>
      <result_span>
        <type>gene</type>
        <score>0.17</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>transcript_1</name>
      <result_span>
        <type>transcript</type>
        <score>0.17</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
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            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>stop_codon_1</name>
      <result_span>
        <type>stop_codon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8008</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_1</name>
      <result_span>
        <type>intron</type>
        <score>0.54</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8293</start>
            <end>8201</end>
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        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_2</name>
      <result_span>
        <type>intron</type>
        <score>0.55</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11429</start>
            <end>8503</end>
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    </result_set>
    <result_set>
      <name>intron_3</name>
      <result_span>
        <type>intron</type>
        <score>0.54</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11662</start>
            <end>11547</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_4</name>
      <result_span>
        <type>intron</type>
        <score>0.54</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11994</start>
            <end>11829</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_1</name>
      <result_span>
        <type>CDS</type>
        <score>0.99</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_2</name>
      <result_span>
        <type>CDS</type>
        <score>0.5</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8294</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_3</name>
      <result_span>
        <type>CDS</type>
        <score>0.52</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_4</name>
      <result_span>
        <type>CDS</type>
        <score>0.59</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_5</name>
      <result_span>
        <type>CDS</type>
        <score>0.54</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>11995</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>start_codon_1</name>
      <result_span>
        <type>start_codon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>12031</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <computational_analysis>
    <program>AUGUSTUS_tom_ugs</program>
    <database>de novo</database>
  </computational_analysis>
  <computational_analysis>
    <program>AUGUSTUS_tom_ugs</program>
    <database>de novo</database>
    <result_set>
      <name>gene_1</name>
      <result_span>
        <type>gene</type>
        <score>0.52</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>6290</start>
            <end>6382</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>transcript_1</name>
      <result_span>
        <type>transcript</type>
        <score>0.52</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>6290</start>
            <end>6382</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_1</name>
      <result_span>
        <type>intron</type>
        <score>0.52</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>1</start>
            <end>6289</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_1</name>
      <result_span>
        <type>CDS</type>
        <score>0.55</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>6290</start>
            <end>6382</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>stop_codon_1</name>
      <result_span>
        <type>stop_codon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>6380</start>
            <end>6382</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <computational_analysis>
    <program>GenomeThreader_SGN_U_tomato</program>
    <database>SGN Tomato Unigenes</database>
  </computational_analysis>
  <computational_analysis>
    <program>GenomeThreader_SGN_U_tomato</program>
    <database>SGN Tomato Unigenes</database>
    <result_set>
      <name>match_1</name>
      <result_span>
        <type>match_part</type>
        <score>0.996</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>9200</start>
            <end>9766</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <annotation id="gene_1">
    <name>gene_1</name>
    <type>gene</type>
    <feature_set id="gene_1">
      <name>GT_PGL_1_AGS_1</name>
      <type>transcript</type>
      <property>
        <type>source</type>
        <value>GenomeThreader</value>
      </property>
      <property>
        <type>seq_id</type>
        <value>C02HBa0125L12.1</value>
      </property>
      <property>
        <type>type</type>
        <value>gene</value>
      </property>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>9200</start>
            <end>9766</end>
          </span>
        </seq_relationship>
      </feature_span>
    </feature_set>
  </annotation>

  
  <computational_analysis>
    <program>GenomeThreader_SGN_markers</program>
    <database>SGN marker sequences</database>
  </computational_analysis>
  <computational_analysis>
    <program>GenomeThreader_SGN_markers</program>
    <database>SGN marker sequences</database>
    <result_set>
      <name>match_1</name>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
      <result_span>
        <type>match_part</type>
        <score>1.000</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>8109</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <annotation id="gene_1">
    <name>gene_1</name>
    <type>gene</type>
    <feature_set id="gene_1">
      <name>GT_PGL_1_AGS_1</name>
      <type>transcript</type>
      <property>
        <type>source</type>
        <value>GenomeThreader</value>
      </property>
      <property>
        <type>seq_id</type>
        <value>C02HBa0125L12.1</value>
      </property>
      <property>
        <type>type</type>
        <value>gene</value>
      </property>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>8109</end>
          </span>
        </seq_relationship>
      </feature_span>
    </feature_set>
  </annotation>

  
  <computational_analysis>
    <program>AUGUSTUS_tom_pot_cdna</program>
    <database>de novo</database>
  </computational_analysis>
  <computational_analysis>
    <program>AUGUSTUS_tom_pot_cdna</program>
    <database>de novo</database>
    <result_set>
      <name>gene_1</name>
      <result_span>
        <type>gene</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>transcript_1</name>
      <result_span>
        <type>transcript</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>stop_codon_1</name>
      <result_span>
        <type>stop_codon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8008</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_1</name>
      <result_span>
        <type>intron</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8341</start>
            <end>8201</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_2</name>
      <result_span>
        <type>intron</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11429</start>
            <end>8503</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_3</name>
      <result_span>
        <type>intron</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11662</start>
            <end>11547</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>intron_4</name>
      <result_span>
        <type>intron</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11994</start>
            <end>11829</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_1</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8200</start>
            <end>8006</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_2</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>8502</start>
            <end>8342</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_3</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11546</start>
            <end>11430</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_4</name>
      <result_span>
        <type>CDS</type>
        <score>1</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11828</start>
            <end>11663</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>CDS_5</name>
      <result_span>
        <type>CDS</type>
        <score>0.94</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>11995</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>start_codon_1</name>
      <result_span>
        <type>start_codon</type>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>12033</start>
            <end>12031</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  
  <computational_analysis>
    <program>BLAST_ath_pep</program>
    <database>AGI Proteins (arabidopsis.org)</database>
  </computational_analysis>
  <computational_analysis>
    <program>BLAST_ath_pep</program>
    <database>AGI Proteins (arabidopsis.org)</database>
    <result_set>
      <name>match_1</name>
      <result_span>
        <type>match</type>
        <score>100</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11834</start>
            <end>11655</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
    <result_set>
      <name>match_2</name>
      <result_span>
        <type>match</type>
        <score>79.0</score>
        <seq_relationship type="query" seq="C02HBa0125L12.1">
          <span>
            <start>11550</start>
            <end>11431</end>
          </span>
        </seq_relationship>
      </result_span>
    </result_set>
  </computational_analysis>

  

  
</game>
