psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 260 4 0 0 0 0 0 0 - SGN-E211319 683 0 264 C04HBa0243O13.1 125258 118772 119036 1 264, 419, 118772, 358 6 0 0 0 0 0 0 - SGN-E214149 800 142 506 C04HBa0243O13.1 125258 118772 119136 1 364, 294, 118772, 44 0 0 0 1 10 2 18 + SGN-E214767 409 355 409 C04HBa0243O13.1 125258 95215 95277 3 28,9,7, 355,393,402, 95215,95255,95270, 33 0 0 0 0 0 0 0 + SGN-E215060 596 551 584 C04HBa0243O13.1 125258 95210 95243 1 33, 551, 95210, 30 0 0 0 0 0 0 0 - SGN-E234878 344 24 54 C04HBa0243O13.1 125258 100772 100802 1 30, 290, 100772, 37 0 0 0 0 0 0 0 - SGN-E238040 421 180 217 C04HBa0243O13.1 125258 100774 100811 1 37, 204, 100774, 43 0 0 0 1 1 1 9 - SGN-E238043 614 172 216 C04HBa0243O13.1 125258 95205 95257 2 36,7, 398,435, 95205,95250, 38 0 0 0 0 0 0 0 - SGN-E238043 614 180 218 C04HBa0243O13.1 125258 100773 100811 1 38, 396, 100773, 44 0 0 0 1 1 1 9 - SGN-E243117 581 498 543 C04HBa0243O13.1 125258 95204 95257 2 37,7, 38,76, 95204,95250, 41 3 0 0 0 0 0 0 + SGN-E246297 473 416 460 C04HBa0243O13.1 125258 35285 35329 1 44, 416, 35285, 38 0 0 0 0 0 0 0 - SGN-E249270 560 8 46 C04HBa0243O13.1 125258 95206 95244 1 38, 514, 95206, 449 2 0 0 0 0 1 153 + SGN-E257153 451 0 451 C04HBa0243O13.1 125258 29313 29917 2 18,433, 0,18, 29313,29484, 36 0 0 0 0 0 0 0 + SGN-E260947 730 59 95 C04HBa0243O13.1 125258 95206 95242 1 36, 59, 95206, 37 2 0 0 0 0 0 0 + SGN-E268683 396 244 283 C04HBa0243O13.1 125258 15441 15480 1 39, 244, 15441, 222 16 0 0 1 2 1 1 + SGN-E268710 480 5 245 C04HBa0243O13.1 125258 91262 91501 2 46,192, 5,53, 91262,91309, 85 5 0 0 1 8 3 4 + SGN-E271056 585 487 585 C04HBa0243O13.1 125258 99878 99972 4 13,9,46,22, 487,508,517,563, 99878,99892,99903,99950, 435 0 0 0 0 0 0 0 - SGN-E274355 435 0 435 C04HBa0243O13.1 125258 111099 111534 1 435, 0, 111099, 497 0 0 0 0 0 0 0 - SGN-E311944 497 0 497 C04HBa0243O13.1 125258 111033 111530 1 497, 0, 111033, 171 7 0 0 3 357 4 344 + SGN-E317062 800 261 796 C04HBa0243O13.1 125258 92595 93117 6 17,19,8,98,26,10, 261,591,631,662,760,786, 92595,92894,92913,92965,93073,93107, 122 3 0 0 2 385 2 363 + SGN-E317099 773 263 773 C04HBa0243O13.1 125258 92595 93083 4 17,72,26,10, 263,664,737,763, 92595,92965,93037,93073, 35 0 0 0 0 0 0 0 + SGN-E319362 411 107 142 C04HBa0243O13.1 125258 100777 100812 1 35, 107, 100777, 510 0 0 0 0 0 0 0 - SGN-E319702 510 0 510 C04HBa0243O13.1 125258 66351 66861 1 510, 0, 66351, 463 25 0 0 4 7 9 27 + SGN-E321973 505 0 495 C04HBa0243O13.1 125258 92998 93513 12 65,26,12,39,18,37,27,23,29,182,8,22, 0,65,91,104,143,161,198,225,250,282,465,473, 92998,93073,93107,93119,93159,93178,93216,93245,93268,93298,93482,93491, 335 8 0 0 2 79 5 2524 - SGN-E324568 422 0 422 C04HBa0243O13.1 125258 32946 35813 6 40,48,25,86,54,90, 0,40,94,192,278,332, 32946,33864,34345,34572,34799,35723, 657 2 0 0 1 2 6 6081 + SGN-E328131 661 0 661 C04HBa0243O13.1 125258 58066 64806 7 155,132,45,170,82,2,73, 0,155,287,332,502,586,588, 58066,62763,62988,63549,63871,63954,64733, 562 2 0 0 0 0 1 521 + SGN-E331430 564 0 564 C04HBa0243O13.1 125258 40606 41691 2 417,147, 0,417, 40606,41544, 35 0 0 0 0 0 0 0 - SGN-E331882 628 235 270 C04HBa0243O13.1 125258 100777 100812 1 35, 358, 100777, 383 0 0 0 0 0 0 0 - SGN-E341972 395 0 383 C04HBa0243O13.1 125258 31693 32076 1 383, 12, 31693, 30 0 0 0 0 0 0 0 + SGN-E344454 564 510 540 C04HBa0243O13.1 125258 100772 100802 1 30, 510, 100772, 353 21 0 0 4 335 3 2973 - SGN-E346281 709 0 709 C04HBa0243O13.1 125258 95606 98953 6 7,66,180,27,85,9, 0,7,159,586,614,700, 95606,96058,96209,98832,98859,98944, 38 0 0 0 0 0 0 0 - SGN-E347325 558 87 125 C04HBa0243O13.1 125258 100773 100811 1 38, 433, 100773, 238 3 0 0 0 0 0 0 + SGN-E349156 721 480 721 C04HBa0243O13.1 125258 118772 119013 1 241, 480, 118772, 68 4 0 0 0 0 1 15 - SGN-E349871 764 606 678 C04HBa0243O13.1 125258 13359 13446 2 10,62, 86,96, 13359,13384, 37 0 0 0 0 0 0 0 - SGN-E350209 739 593 630 C04HBa0243O13.1 125258 95206 95243 1 37, 109, 95206, 31 1 0 0 0 0 0 0 - SGN-E350652 433 363 395 C04HBa0243O13.1 125258 69063 69095 1 32, 38, 69063, 236 3 0 0 1 1 1 1 + SGN-E352769 720 480 720 C04HBa0243O13.1 125258 118772 119012 3 210,4,25, 480,691,695, 118772,118982,118987, 31 1 0 0 0 0 0 0 - SGN-E353698 417 357 389 C04HBa0243O13.1 125258 69063 69095 1 32, 28, 69063, 36 0 0 0 0 0 0 0 + SGN-E357345 605 534 570 C04HBa0243O13.1 125258 95205 95241 1 36, 534, 95205, 31 1 0 0 0 0 0 0 - SGN-E357537 419 361 393 C04HBa0243O13.1 125258 69063 69095 1 32, 26, 69063, 580 6 0 0 0 0 1 521 + SGN-E360353 586 0 586 C04HBa0243O13.1 125258 40641 41748 2 382,204, 0,382, 40641,41544, 284 7 0 0 0 0 0 0 + SGN-E361336 291 0 291 C04HBa0243O13.1 125258 40609 40900 1 291, 0, 40609, 427 11 0 0 0 0 1 364 - SGN-E361605 459 21 459 C04HBa0243O13.1 125258 42273 43075 2 60,378, 0,60, 42273,42697, 480 3 0 0 0 0 1 521 + SGN-E361754 483 0 483 C04HBa0243O13.1 125258 40637 41641 2 386,97, 0,386, 40637,41544, 325 10 0 0 0 0 0 0 + SGN-E363102 335 0 335 C04HBa0243O13.1 125258 40622 40957 1 335, 0, 40622, 399 4 0 0 0 0 0 0 + SGN-E363253 417 14 417 C04HBa0243O13.1 125258 40606 41009 1 403, 14, 40606, 534 8 0 0 0 0 0 0 + SGN-E364043 542 0 542 C04HBa0243O13.1 125258 41682 42224 1 542, 0, 41682, 375 8 0 0 0 0 0 0 + SGN-E364264 383 0 383 C04HBa0243O13.1 125258 40616 40999 1 383, 0, 40616, 37 0 0 0 0 0 0 0 + SGN-E369471 767 730 767 C04HBa0243O13.1 125258 95206 95243 1 37, 730, 95206, 41 3 0 0 0 0 0 0 + SGN-E369503 691 416 460 C04HBa0243O13.1 125258 35285 35329 1 44, 416, 35285, 35 0 0 0 0 0 0 0 - SGN-E376006 673 144 179 C04HBa0243O13.1 125258 100777 100812 1 35, 494, 100777, 37 0 0 0 0 0 0 0 + SGN-E376881 453 59 96 C04HBa0243O13.1 125258 100776 100813 1 37, 59, 100776, 79 3 0 0 1 3 2 4662 - SGN-E537893 811 19 104 C04HBa0243O13.1 125258 120044 124788 3 59,8,15, 707,766,777, 120044,124756,124773, 30 0 0 0 0 0 0 0 + SGN-E539849 628 459 489 C04HBa0243O13.1 125258 69067 69097 1 30, 459, 69067, 36 0 0 0 0 0 0 0 + SGN-E546018 676 88 124 C04HBa0243O13.1 125258 95206 95242 1 36, 88, 95206, 789 12 0 1 1 1 1 521 + SGN-E547003 803 0 803 C04HBa0243O13.1 125258 40608 41931 3 415,276,111, 0,415,692, 40608,41544,41820, 602 14 0 0 1 1 1 364 - SGN-E547009 633 16 633 C04HBa0243O13.1 125258 42087 43067 3 16,230,370, 0,17,247, 42087,42103,42697, 625 10 0 0 1 1 1 521 + SGN-E547010 636 0 636 C04HBa0243O13.1 125258 40608 41764 3 415,122,98, 0,415,538, 40608,41544,41666, 680 15 0 0 0 0 1 364 - SGN-E547057 783 22 717 C04HBa0243O13.1 125258 42016 43075 2 317,378, 66,383, 42016,42697, 778 17 0 0 1 1 1 364 - SGN-E547631 818 22 818 C04HBa0243O13.1 125258 41998 43157 3 100,235,460, 0,101,336, 41998,42098,42697, 36 0 0 0 0 0 0 0 + SGN-E547738 482 93 129 C04HBa0243O13.1 125258 95206 95242 1 36, 93, 95206, 818 17 0 0 0 0 1 364 - SGN-E549464 854 9 844 C04HBa0243O13.1 125258 41876 43075 2 457,378, 10,467, 41876,42697, 525 1 0 0 0 0 1 153 + SGN-E551027 526 0 526 C04HBa0243O13.1 125258 29312 29991 2 19,507, 0,19, 29312,29484, 183 8 0 0 0 0 0 0 + SGN-E578408 708 0 191 C04HBa0243O13.1 125258 118945 119136 1 191, 0, 118945, 33 1 0 0 0 0 0 0 + SGN-E578420 394 296 330 C04HBa0243O13.1 125258 36841 36875 1 34, 296, 36841, 525 1 0 0 0 0 1 153 + SGN-E688787 526 0 526 C04HBa0243O13.1 125258 29312 29991 2 19,507, 0,19, 29312,29484, 803 1 0 0 1 1 7 3211 - SGN-E689183 805 0 805 C04HBa0243O13.1 125258 31799 35814 9 34,244,81,62,52,90,96,54,91, 0,35,279,360,422,474,564,660,714, 31799,31833,32688,32924,33864,34343,34562,34799,35723, 49 0 0 0 1 1 2 16 + SGN-E692360 531 410 460 C04HBa0243O13.1 125258 95214 95279 3 29,11,9, 410,440,451, 95214,95253,95270, 49 0 0 0 1 1 2 16 + SGN-E692368 630 410 460 C04HBa0243O13.1 125258 95214 95279 3 29,11,9, 410,440,451, 95214,95253,95270, 34 0 0 0 0 0 1 3 - SGN-E693070 935 859 893 C04HBa0243O13.1 125258 69052 69089 2 6,28, 42,48, 69052,69061, 57 3 0 0 0 0 0 0 + SGN-E693221 756 621 681 C04HBa0243O13.1 125258 92579 92639 1 60, 621, 92579, 906 1 0 0 0 0 11 5852 - SGN-E702115 917 0 907 C04HBa0243O13.1 125258 32687 39446 12 82,62,52,90,96,54,91,77,71,108,71,53, 10,92,154,206,296,392,446,537,614,685,793,864, 32687,32924,33864,34343,34562,34799,35723,36028,36490,37678,39251,39393, 88 7 0 0 0 0 0 0 + SGN-E707946 800 705 800 C04HBa0243O13.1 125258 120044 120139 1 95, 705, 120044, 33 0 0 0 0 0 0 0 - SGN-E717849 598 358 391 C04HBa0243O13.1 125258 100780 100813 1 33, 207, 100780, 33 0 0 0 0 0 0 0 - SGN-E719256 532 259 292 C04HBa0243O13.1 125258 100780 100813 1 33, 240, 100780, 36 0 0 0 0 0 0 0 + SGN-E735035 601 504 540 C04HBa0243O13.1 125258 95205 95241 1 36, 504, 95205, 864 2 0 0 0 0 11 5840 - SGN-E738197 870 4 870 C04HBa0243O13.1 125258 32722 39428 12 47,62,52,90,96,54,91,77,83,108,71,35, 0,47,109,161,251,347,401,492,569,652,760,831, 32722,32924,33864,34343,34562,34799,35723,36028,36490,37678,39251,39393, 240 0 0 0 1 5 4 1467 - SGN-E744424 246 1 246 C04HBa0243O13.1 125258 32692 34399 5 77,62,52,34,15, 0,77,139,191,230, 32692,32924,33864,34343,34384,