psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 2573 5 0 0 1 3 3 218 + SGN-U312428 2619 28 2609 C04HBa0075G11.1 150168 90134 92930 5 399,871,895,62,351, 28,427,1298,2196,2258, 90134,90634,91509,92404,92579, 1100 5 0 0 1 3 1 848 + SGN-U312429 1108 0 1108 C04HBa0075G11.1 150168 90807 92760 3 376,373,356, 0,376,752, 90807,92031,92404, 584 2 0 0 1 3 2 1072 + SGN-U312432 589 0 589 C04HBa0075G11.1 150168 91060 92718 4 123,262,62,139, 0,123,388,450, 91060,92142,92404,92579, 620 27 0 0 9 54 8 1180 + SGN-U312433 716 0 701 C04HBa0075G11.1 150168 90929 92756 15 49,38,13,11,140,40,49,109,13,13,14,16,60,30,52, 0,49,87,102,115,255,295,346,458,476,490,524,558,618,649, 90929,90979,91019,91032,91043,92205,92246,92295,92404,92420,92433,92580,92613,92674,92704, 1807 37 0 1 12 59 21 762 + SGN-U312434 1920 0 1904 C04HBa0075G11.1 150168 90148 92755 27 9,7,4,10,31,4,13,19,8,9,8,18,3,12,201,549,399,186,49,109,13,13,14,16,60,30,51, 0,13,21,25,35,68,72,85,104,112,122,130,148,151,163,364,913,1313,1499,1550,1662,1680,1694,1728,1762,1822,1853, 90148,90164,90174,90179,90190,90226,90231,90245,90265,90274,90286,90295,90315,90319,90332,90634,91660,92059,92246,92295,92404,92420,92433,92580,92613,92674,92704, 1840 48 0 0 9 38 6 141 + SGN-U312435 1958 16 1942 C04HBa0075G11.1 150168 91034 93063 13 97,272,45,81,26,73,34,71,66,581,62,442,38, 16,115,392,440,526,553,626,660,733,808,1392,1454,1904, 91034,91131,91407,91452,91550,91576,91650,91686,91757,91823,92404,92579,93025, 46 0 0 0 1 103 1 140 - SGN-U315686 1359 1194 1343 C04HBa0075G11.1 150168 48427 48613 2 33,13, 16,152, 48427,48600, 1087 3 0 0 0 0 3 2662 - SGN-U316316 1112 0 1090 C04HBa0075G11.1 150168 24457 28209 4 332,360,359,39, 22,354,714,1073, 24457,26597,27802,28170, 35 0 0 0 0 0 0 0 - SGN-U316489 613 135 170 C04HBa0075G11.1 150168 28309 28344 1 35, 443, 28309, 1514 11 0 1 1 1 4 1370 - SGN-U316660 1527 0 1527 C04HBa0075G11.1 150168 73594 76490 6 44,4,293,327,665,193, 0,44,49,342,669,1334, 73594,73639,73643,74334,75467,76297, 34 0 0 0 0 0 0 0 - SGN-U318528 1891 26 60 C04HBa0075G11.1 150168 28309 28343 1 34, 1831, 28309, 1268 3 0 0 0 0 6 3663 + SGN-U319222 1311 0 1271 C04HBa0075G11.1 150168 103165 108099 7 148,13,100,177,99,246,488, 0,148,161,261,438,537,783, 103165,103316,105425,106038,106833,107034,107611, 715 9 0 0 0 0 4 1234 + SGN-U319223 724 0 724 C04HBa0075G11.1 150168 105147 107105 5 225,152,177,99,71, 0,225,377,554,653, 105147,105373,106038,106833,107034, 36 0 0 0 1 1 1 1 - SGN-U319322 854 597 634 C04HBa0075G11.1 150168 28322 28359 3 22,4,10, 220,243,247, 28322,28344,28349, 31 1 0 0 0 0 0 0 - SGN-U319540 1535 119 151 C04HBa0075G11.1 150168 28307 28339 1 32, 1384, 28307, 33 0 0 0 0 0 0 0 + SGN-U319981 1172 1107 1140 C04HBa0075G11.1 150168 28311 28344 1 33, 1107, 28311, 1417 7 0 0 1 1 7 2331 - SGN-U319986 1500 0 1425 C04HBa0075G11.1 150168 130805 134560 9 46,336,211,158,87,191,176,116,103, 75,122,458,669,827,914,1105,1281,1397, 130805,130851,131290,131609,132107,132286,132916,134254,134457, 748 3 0 0 2 2 2 1511 + SGN-U320791 795 0 753 C04HBa0075G11.1 150168 117691 119953 5 76,27,539,99,10, 0,77,104,644,743, 117691,117767,119304,119843,119943, 760 9 0 0 0 0 1 1495 + SGN-U320792 770 1 770 C04HBa0075G11.1 150168 117687 119951 2 107,662, 1,108, 117687,119289, 1797 4 0 2 0 0 3 407 - SGN-U320985 1827 0 1803 C04HBa0075G11.1 150168 55716 57926 4 515,60,194,1034, 24,539,599,793, 55716,56445,56609,56892, 780 5 0 0 0 0 3 1165 - SGN-U321121 1796 1002 1787 C04HBa0075G11.1 150168 147890 149840 4 378,47,239,121, 9,387,434,673, 147890,148924,149182,149719, 1908 1 0 0 0 0 0 0 - SGN-U321634 1909 0 1909 C04HBa0075G11.1 150168 18606 20515 1 1909, 0, 18606, 770 2 0 0 0 0 8 2807 + SGN-U321638 1493 699 1471 C04HBa0075G11.1 150168 26 3605 9 109,45,69,92,43,60,60,242,52, 699,808,853,922,1014,1057,1117,1177,1419, 26,925,1164,1329,1525,2453,2904,3310,3553, 853 7 0 0 0 0 5 1915 + SGN-U321765 860 0 860 C04HBa0075G11.1 150168 51473 54248 6 22,147,18,221,227,225, 0,22,169,187,408,635, 51473,51497,51653,51674,52729,54023, 938 15 0 0 4 8 7 1933 + SGN-U321766 971 0 961 C04HBa0075G11.1 150168 51474 54360 10 21,147,18,223,224,32,90,32,130,36, 0,21,168,186,410,634,671,762,795,925, 51474,51497,51653,51674,52732,54023,54069,54159,54191,54324, 38 2 0 0 0 0 0 0 - SGN-U322803 1197 917 957 C04HBa0075G11.1 150168 54458 54498 1 40, 240, 54458, 35 0 0 0 0 0 0 0 - SGN-U324358 1315 1055 1090 C04HBa0075G11.1 150168 28308 28343 1 35, 225, 28308, 38 0 0 0 0 0 1 2 - SGN-U324412 1644 1586 1624 C04HBa0075G11.1 150168 28303 28343 2 6,32, 20,26, 28303,28311, 413 7 0 0 2 15 0 0 - SGN-U324495 529 0 435 C04HBa0075G11.1 150168 142115 142535 3 51,106,263, 94,146,266, 142115,142166,142272, 922 4 0 0 0 0 4 751 - SGN-U324496 948 0 926 C04HBa0075G11.1 150168 142112 143789 5 433,195,243,4,51, 22,455,650,893,897, 142112,142960,143273,143522,143738, 34 0 0 0 0 0 0 0 + SGN-U327794 874 654 688 C04HBa0075G11.1 150168 28308 28342 1 34, 654, 28308, 568 3 0 0 0 0 3 458 - SGN-U327831 571 0 571 C04HBa0075G11.1 150168 81311 82340 4 64,78,97,332, 0,64,142,239, 81311,81467,81780,82008, 823 0 0 1 0 0 0 0 - SGN-U329240 824 0 824 C04HBa0075G11.1 150168 146153 146977 1 824, 0, 146153, 810 0 0 0 1 1 4 2748 + SGN-U329355 811 0 811 C04HBa0075G11.1 150168 136821 140379 6 80,273,106,144,57,150, 0,80,353,459,603,661, 136821,137359,138033,139356,140172,140229, 703 1 0 0 0 0 4 3143 - SGN-U329641 704 0 704 C04HBa0075G11.1 150168 61624 65471 5 58,335,79,89,143, 0,58,393,472,561, 61624,61683,62021,62288,65328, 761 2 0 0 0 0 2 219 - SGN-U332031 771 0 763 C04HBa0075G11.1 150168 60516 61498 3 341,121,301, 8,349,470, 60516,60974,61197, 724 1 0 0 0 0 0 0 + SGN-U332258 725 0 725 C04HBa0075G11.1 150168 118227 118952 1 725, 0, 118227, 45 1 0 0 1 1 1 51 + SGN-U332258 725 293 340 C04HBa0075G11.1 150168 118837 118934 3 15,20,11, 293,309,329, 118837,118852,118923, 453 2 0 0 0 0 1 198 + SGN-U333552 455 0 455 C04HBa0075G11.1 150168 91265 91918 2 190,265, 0,190, 91265,91653, 393 13 0 0 0 0 1 4 + SGN-U333554 406 0 406 C04HBa0075G11.1 150168 91303 91713 2 202,204, 0,202, 91303,91509, 317 5 0 0 1 13 2 13 + SGN-U333555 335 0 335 C04HBa0075G11.1 150168 91165 91500 3 47,131,144, 0,60,191, 91165,91224,91356, 336 0 0 0 0 0 1 4 + SGN-U333556 530 194 530 C04HBa0075G11.1 150168 91454 91794 2 51,285, 194,245, 91454,91509, 213 11 0 0 1 1 0 0 + SGN-U333558 232 7 232 C04HBa0075G11.1 150168 90163 90387 2 194,30, 7,202, 90163,90357, 414 1 0 0 1 43 1 144 + SGN-U333559 458 0 458 C04HBa0075G11.1 150168 90155 90714 2 352,63, 0,395, 90155,90651, 368 16 0 0 7 90 6 89 + SGN-U333560 491 11 485 C04HBa0075G11.1 150168 91466 91939 9 41,26,22,70,98,41,15,8,63, 11,53,88,122,192,297,370,399,422, 91466,91507,91554,91586,91657,91760,91823,91838,91876, 435 22 0 0 1 2 1 1808 + SGN-U335590 478 19 478 C04HBa0075G11.1 150168 24457 26722 3 130,202,125, 19,151,353, 24457,24587,26597, 572 12 0 0 0 0 1 845 - SGN-U335591 584 0 584 C04HBa0075G11.1 150168 26699 28128 2 258,326, 0,258, 26699,27802, 451 12 0 0 1 16 1 1 - SGN-U335773 766 287 766 C04HBa0075G11.1 150168 73262 73726 3 57,64,342, 0,73,137, 73262,73319,73384, 389 17 0 0 0 0 2 211 - SGN-U336990 426 0 406 C04HBa0075G11.1 150168 131121 131738 3 66,211,129, 20,86,297, 131121,131290,131609, 545 1 0 0 0 0 0 0 + SGN-U337219 546 0 546 C04HBa0075G11.1 150168 119020 119566 1 546, 0, 119020, 34 0 0 0 0 0 0 0 - SGN-U338984 572 202 236 C04HBa0075G11.1 150168 11530 11564 1 34, 336, 11530, 806 14 0 0 1 1 5 2610 + SGN-U339365 822 1 822 C04HBa0075G11.1 150168 136783 140213 6 118,272,106,139,144,41, 1,120,392,498,637,781, 136783,137360,138033,138849,139356,140172, 857 11 0 0 1 1 1 2256 - SGN-U339610 873 4 873 C04HBa0075G11.1 150168 108342 111466 3 153,242,473, 0,154,396, 108342,108495,110993, 710 6 0 0 0 0 2 2 - SGN-U339611 716 0 716 C04HBa0075G11.1 150168 108587 109305 3 29,367,320, 0,29,396, 108587,108617,108985, 561 3 0 0 0 0 2 1282 + SGN-U341111 564 0 564 C04HBa0075G11.1 150168 67617 69463 3 211,92,261, 0,211,303, 67617,69016,69202, 34 0 0 0 0 0 0 0 + SGN-U341394 513 478 512 C04HBa0075G11.1 150168 28304 28338 1 34, 478, 28304, 308 18 0 0 4 49 7 26 + SGN-U341709 792 313 688 C04HBa0075G11.1 150168 133254 133606 8 45,32,49,7,58,19,93,23, 313,358,390,465,475,539,558,665, 133254,133303,133336,133390,133398,133460,133481,133583, 543 1 0 0 0 0 1 1000 + SGN-U341871 544 0 544 C04HBa0075G11.1 150168 42383 43927 2 503,41, 0,503, 42383,43886, 34 0 0 0 0 0 0 0 - SGN-U344400 536 491 525 C04HBa0075G11.1 150168 28308 28342 1 34, 11, 28308,